pre-rRNA processing protein involved in ribosome biogenesis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10070 AT5G10070 |
| fragaria_vesca | FvH4_1g21690 FvH4_1g21690 FvH4_1g21690 FvH4_1g21690 |
| malus_domestica | MD01G1023100.v1.1 MD15G1329600.v1.1 |
| prunus_persica | Prupe.6G178600_v2.0.a1 Prupe.6G178600_v2.0.a1 Prupe.6G178600_v2.0.a1 Prupe.6G178600_v2.0.a1 |
| pyrus_communis | pycom01g05130 pycom15g29590 |
| rosa_chinensis | RchiOBHm_Chr2g0115571 |
| rosa_laevigata | RLG00000018194 |
| rosa_multiflora | Rmu_sc0021766.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00128100 Rroxscaffold_2G00128980 |
| rosa_rugosa | Rorug02G0198100 Rorug02G0198200 |
| rosa_samantha | Rh2AG255600 Rh2BG266300 Rh2CG260800 Rh2DG263800 |
| rosa_wichuraiana | Rw2G019990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 246 |
| AcsI | RAATTY | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 70, 71 |
| AgsI | TTSAA | 2 cut(s) | 41, 255 |
| AjnI | CCWGG | 1 cut(s) | 135 |
| AluBI | AGCT | 1 cut(s) | 201 |
| AluI | AGCT | 1 cut(s) | 201 |
| ApoI | RAATTY | 1 cut(s) | 20 |
| BccI | CCATC | 1 cut(s) | 231 |
| BciT130I | CCWGG | 1 cut(s) | 137 |
| BfmI | CTRYAG | 1 cut(s) | 172 |
| Bme1390I | CCNGG | 1 cut(s) | 137 |
| BmiI | GGNNCC | 1 cut(s) | 169 |
| BmrFI | CCNGG | 1 cut(s) | 137 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 70, 71 |
| BseBI | CCWGG | 1 cut(s) | 137 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 70, 71 |
| BseMII | CTCAG | 1 cut(s) | 103 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 70, 71 |
| BspACI | CCGC | 1 cut(s) | 246 |
| BspCNI | CTCAG | 1 cut(s) | 104 |
| BspLI | GGNNCC | 1 cut(s) | 169 |
| Bst2UI | CCWGG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 1 cut(s) | 108 |
| BstC8I | GCNNGC | 2 cut(s) | 142, 203 |
| BstDEI | CTNAG | 2 cut(s) | 112, 278 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 141 |
| BstNI | CCWGG | 1 cut(s) | 137 |
| BstSCI | CCNGG | 1 cut(s) | 135 |
| BstSFI | CTRYAG | 1 cut(s) | 172 |
| BtsI | GCAGTG | 1 cut(s) | 212 |
| BtsIMutI | CAGTG | 2 cut(s) | 113, 212 |
| Cac8I | GCNNGC | 2 cut(s) | 142, 203 |
| CviAII | CATG | 1 cut(s) | 51 |
| CviJI | RGCY | 3 cut(s) | 140, 201, 242 |
| CviKI_1 | RGCY | 3 cut(s) | 140, 201, 242 |
| DdeI | CTNAG | 2 cut(s) | 112, 278 |
| EciI | GGCGGA | 1 cut(s) | 235 |
| EcoRII | CCWGG | 1 cut(s) | 135 |
| FaeI | CATG | 1 cut(s) | 54 |
| FaiI | YATR | 4 cut(s) | 52, 89, 226, 264 |
| FatI | CATG | 1 cut(s) | 50 |
| Hin1II | CATG | 1 cut(s) | 54 |
| HinfI | GANTC | 2 cut(s) | 228, 266 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 233 |
| HpyAV | CCTTC | 1 cut(s) | 177 |
| HpyCH4III | ACNGT | 1 cut(s) | 108 |
| HpyCH4V | TGCA | 2 cut(s) | 18, 144 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 141 |
| HpyF3I | CTNAG | 2 cut(s) | 112, 278 |
| Hsp92II | CATG | 1 cut(s) | 54 |
| LpnPI | CCDG | 4 cut(s) | 56, 122, 132, 149 |
| MboII | GAAGA | 1 cut(s) | 18 |
| MluCI | AATT | 2 cut(s) | 20, 95 |
| MnlI | CCTC | 4 cut(s) | 75, 187, 209, 275 |
| MseI | TTAA | 1 cut(s) | 293 |
| MspR9I | CCNGG | 1 cut(s) | 137 |
| MvaI | CCWGG | 1 cut(s) | 137 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 141 |
| NlaIII | CATG | 1 cut(s) | 54 |
| NlaIV | GGNNCC | 1 cut(s) | 169 |
| PfeI | GAWTC | 2 cut(s) | 228, 266 |
| Psp6I | CCWGG | 1 cut(s) | 135 |
| PspGI | CCWGG | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 169 |
| SaqAI | TTAA | 1 cut(s) | 293 |
| ScrFI | CCNGG | 1 cut(s) | 137 |
| SetI | ASST | 3 cut(s) | 169, 198, 203 |
| SfcI | CTRYAG | 1 cut(s) | 172 |
| Sse9I | AATT | 2 cut(s) | 20, 95 |
| SsiI | CCGC | 1 cut(s) | 246 |
| StyD4I | CCNGG | 1 cut(s) | 135 |
| TaaI | ACNGT | 1 cut(s) | 108 |
| TasI | AATT | 2 cut(s) | 20, 95 |
| TfiI | GAWTC | 2 cut(s) | 228, 266 |
| Tru1I | TTAA | 1 cut(s) | 293 |
| Tru9I | TTAA | 1 cut(s) | 293 |
| TscAI | CASTG | 2 cut(s) | 113, 212 |
| TspDTI | ATGAA | 2 cut(s) | 112, 279 |
| TspRI | CASTG | 2 cut(s) | 113, 212 |
| XapI | RAATTY | 1 cut(s) | 20 |