Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0024478.1

Orthogroup ID

OG0005816

Physical Location & Seq

Genomic Coordinates Forward (+)

14600 .. 16825

Gene Structure 2226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0024478.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

atgagtctctatccttttttaatttacgcccttttcttctcttactgggctactgtttcacgtagtgaagtgttcatagtccgagtccaaaacgacctgaaaccgccacaacactccataaaccatgaatggtacgcttccaccctcaacacactgtctgcaacaaacgactccctccattacgtctacaacactgtctttcatggcttctccgccgacctcaccacacaacaagccaaccagctacgccagcgcccagaaatagtaagcgttttccgtgacagactcctcaaacatcatacaactaggtctccggcattcctcggcctcaacacaaacgaaaccaacgaccagggcattctgaaactgtctgattccggtgccaacgtcatcatcggtgtcatcgacagcggcatatggccagaacaccgcagcttccacgaccatggcctcggaccaatcccttcacattggaaaggccgctgcctacccggagattacgaaaatgccgccaccttttgcaacagaaagatcatcggagcaagatacttcacccgaggtatcaacaacaaaactgaagtttcttccgctagagacgacgttggccatggaacacacacggcgtcaactatggctggacgacacgtcggaagcgcatctttcctcggcttcgccaaaggtgttgcatctggaatggccccaaaagcacgacttgcagtctacagagtgtgtgggaagatagggtgtgcgcaatccgacgtactcgccggtatcgaacaggctgtacaggacggcgtcgacgtcatctctatgtccctcggcggcgactcctccttgccgtacgataaggatccgattgccatcgccacattcgccgcaaccgagaaaggcattgtctgttcggcctcaggaggcaatgcgggcccagatcacggcaccgtgactaatgtcgcaccgtggatcacaaccgtcggtgcaagcacgattgaccgtgaatttcgcgcagatttagtgcttggtaatggccgcgtgatcactggttgttctctctaccatggcacttggccggagaaggcatccgcaccgttggtttacaccggtgggatatgcatggagcttaccaataagaaacgcatccccgacttggtccgaggaaacatcgtggtttgcaattatatcagcacggttttccctgaagatttcgaccggatcaggaatgctggtgcggtcggaatggtcgggattgaacaaaacgacctattggcaactccatattctcttcctgcactggcgatcagacgatcagcccgtgacgaacttctccggtatatgaacgtcaccaagaatgcacgtgcagcaatgcgcttccgtgggactgttacaggggtgaagccagcaccggtggtagccgacttttcgtcgcgaggacccaatctgttgtctccgtttattgtgaagcccgatgtcatagcgccgggtgtcaacatcttagcggcttggccgcaattcgatgatttgtctgatttcagtataatgtcagggacatccatgtcttgcccccatgtgtcgggaatagctgcattgttgagaggggcccgccctagctggtctcccgccatgatcaaatcggcaatgatgaccacggcatacacaaagtatcgcgacggagggccgctgctagatgagttgcatcgccaccaggtggtgtgggggatcggtgccggacacgtggatcctcagaaggcgcttgatcctggtttggtgtatgatcttaaggtggatgactatatcaactttttgtgtgcgtcgaattatagtgacgaacaagtaagggcaatcacacaaaagactactgcatgcaagggcaggaaaggcttcactcaaccgtgggatttcaactacccagctatatcgccggtttttgatgtgacgcggtggccaaaatcgaaggatgtaattgttcggaaaagtgttacaaatgttggtgaaggttcctccacttacattgtacgtagtgtcatcaatccatttggggtcaaggttcgtgttattcctcctattttgaagttttcgaagaaaggtgaaattcagagttatattgtcaagtttacggctgataagaatgtgggagtgccgcgacatgggaatgtggcttttggccagctgatttggacagatgggaaacataacgtttcttcaccgattacggtgacatatatgggatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

741

Amino Acids

80.67

Weight (kDa)

9.12

Isoelectric Point (pI)

31.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63610
fragaria_vesca	FvH4_1g25340 FvH4_1g25340 FvH4_1g25350
malus_domestica	MD00G1110700.v1.1 MD15G1137900.v1.1
prunus_persica	Prupe.4G280700_v2.0.a1
pyrus_communis	pycom1146g00040
rosa_chinensis	RchiOBHm_Chr2g0123381 RchiOBHm_Chr2g0123391
rosa_laevigata	RLG00000018746
rosa_multiflora	Rmu_sc0004330.1_g000003 Rmu_sc0024478.1_g000001 Rmu_sc0041165.1_g000001 Rmu_ssc0000345.1_g000001
rosa_roxburghii	Rroxscaffold_2G00120740 Rroxscaffold_2G00120750
rosa_rugosa	Rorug02G0244900 Rorug02G0244900 Rorug02G0245000
rosa_samantha	Rh2AG303700 Rh2BG311800 Rh2CG290300 Rh2CG290400 Rh2DG327800 Rh2DG327900
rosa_wichuraiana	Rw2G024310 Rw2G024320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1549
AatII	GACGTC	1 cut(s)	804
Acc16I	TGCGCA	1 cut(s)	750
AccB1I	GGYRCC	3 cut(s)	380, 935, 1718
AccB7I	CCANNNNNTGG	1 cut(s)	1702
AccI	GTMKAC	3 cut(s)	186, 720, 798
AccII	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
AclI	AACGTT	1 cut(s)	2190
AclWI	GGATC	8 cut(s)	845, 858, 968, 1217, 1721, 1727, 1740, 1745
AcoI	YGGCCR	7 cut(s)	419, 604, 1024, 1064, 1499, 1937, 2158
AcsI	RAATTY	2 cut(s)	995, 2085
AcuI	CTGAAG	2 cut(s)	597, 1215
AcvI	CACGTG	2 cut(s)	1352, 1729
AcyI	GRCGYC	3 cut(s)	623, 795, 801
AdeI	CACNNNGTG	2 cut(s)	65, 1702
AfaI	GTAC	5 cut(s)	134, 762, 786, 842, 2010
AfiI	CCNNNNNNNGG	5 cut(s)	932, 1144, 1567, 1702, 2141
AflII	CTTAAG	1 cut(s)	1772
AflIII	ACRYGT	2 cut(s)	643, 1726
AgeI	ACCGGT	2 cut(s)	1097, 1399
AgsI	TTSAA	3 cut(s)	1247, 1897, 2065
AhdI	GACNNNNNGTC	3 cut(s)	644, 716, 1417
AjiI	CACGTC	1 cut(s)	646
AjnI	CCWGG	3 cut(s)	351, 1698, 1753
AluBI	AGCT	7 cut(s)	244, 435, 1117, 1577, 1605, 1907, 2164
AluI	AGCT	7 cut(s)	244, 435, 1117, 1577, 1605, 1907, 2164
Alw26I	GTCTC	5 cut(s)	11, 315, 588, 1446, 1614
AlwI	GGATC	8 cut(s)	845, 858, 968, 1217, 1721, 1727, 1740, 1745
Ama87I	CYCGRG	1 cut(s)	555
ApaI	GGGCCC	2 cut(s)	926, 1597
ApeKI	GCWGC	5 cut(s)	432, 483, 1355, 1577, 1675
ApoI	RAATTY	2 cut(s)	995, 2085
AsiGI	ACCGGT	2 cut(s)	1097, 1399
Asp700I	GAANNNNTTC	1 cut(s)	1874
AspLEI	GCGC	7 cut(s)	255, 656, 751, 1004, 1365, 1474, 1747
AspS9I	GGNCC	9 cut(s)	455, 697, 922, 923, 1147, 1427, 1593, 1594, 1670
AsuC2I	CCSGG	2 cut(s)	492, 1476
AsuHPI	GGTGA	8 cut(s)	214, 544, 1330, 1399, 1997, 2093, 2190, 2221
AsuII	TTCGAA	1 cut(s)	2072
AvaI	CYCGRG	1 cut(s)	555
AvaII	GGWCC	3 cut(s)	455, 1147, 1427
AxyI	CCTNAGG	1 cut(s)	907
BaeGI	GKGCMC	2 cut(s)	926, 1597
BalI	TGGCCA	4 cut(s)	421, 606, 1939, 2160
BamHI	GGATCC	2 cut(s)	850, 1732
BanI	GGYRCC	3 cut(s)	380, 935, 1718
BanII	GRGCYC	2 cut(s)	926, 1597
BbrPI	CACGTG	2 cut(s)	1352, 1729
BbvI	GCAGC	5 cut(s)	444, 470, 1367, 1564, 1662
BccI	CCATC	2 cut(s)	869, 2171
BceAI	ACGGC	6 cut(s)	636, 808, 823, 949, 1659, 2127
BciT130I	CCWGG	3 cut(s)	353, 1700, 1755
BclI	TGATCA	2 cut(s)	1032, 1620
BcnI	CCSGG	2 cut(s)	492, 1476
BcoDI	GTCTC	5 cut(s)	11, 315, 588, 1446, 1614
BfaI	CTAG	4 cut(s)	306, 591, 1602, 1679
BfmI	CTRYAG	1 cut(s)	721
BfoI	RGCGCY	3 cut(s)	256, 1475, 1748
BfrI	CTTAAG	1 cut(s)	1772
Bme1390I	CCNGG	5 cut(s)	353, 492, 1476, 1700, 1755
Bme18I	GGWCC	3 cut(s)	455, 1147, 1427
BmeRI	GACNNNNNGTC	3 cut(s)	644, 716, 1417
BmeT110I	CYCGRG	1 cut(s)	555
BmgBI	CACGTC	1 cut(s)	646
BmgT120I	GGNCC	9 cut(s)	455, 697, 922, 923, 1147, 1427, 1593, 1594, 1670
BmrFI	CCNGG	5 cut(s)	353, 492, 1476, 1700, 1755
BmrI	ACTGGG	1 cut(s)	55
BmsI	GCATC	5 cut(s)	665, 695, 1085, 1143, 1699
BmuI	ACTGGG	1 cut(s)	55
BoxI	GACNNNNGTC	1 cut(s)	947
Bpu14I	TTCGAA	1 cut(s)	2072
BpuMI	CCSGG	2 cut(s)	492, 1476
BsaAI	YACGTR	4 cut(s)	62, 1352, 1729, 2012
BsaBI	GATNNNNATC	2 cut(s)	849, 860
BsaHI	GRCGYC	3 cut(s)	623, 795, 801
BsaI	GGTCTC	2 cut(s)	315, 1614
BsaWI	WCCGGW	5 cut(s)	377, 1097, 1206, 1323, 1399
BsaXI	ACNNNNNCTCC	2 cut(s)	295, 325
Bsc4I	CCNNNNNNNGG	5 cut(s)	932, 1144, 1567, 1702, 2141
Bse118I	RCCGGY	4 cut(s)	767, 1097, 1399, 1915
Bse1I	ACTGG	3 cut(s)	50, 1042, 1293
Bse21I	CCTNAGG	1 cut(s)	907
Bse3DI	GCAATG	3 cut(s)	922, 1365, 1638
Bse8I	GATNNNNATC	2 cut(s)	849, 860
BseBI	CCWGG	3 cut(s)	353, 1700, 1755
BseGI	GGATG	5 cut(s)	1076, 1134, 1544, 1786, 1957
BseJI	GATNNNNATC	2 cut(s)	849, 860
BseLI	CCNNNNNNNGG	5 cut(s)	932, 1144, 1567, 1702, 2141
BseMI	GCAATG	3 cut(s)	922, 1365, 1638
BseMII	CTCAG	2 cut(s)	921, 1751
BseNI	ACTGG	3 cut(s)	50, 1042, 1293
BseRI	GAGGAG	2 cut(s)	278, 820
BseSI	GKGCMC	2 cut(s)	926, 1597
BseXI	GCAGC	5 cut(s)	444, 470, 1367, 1564, 1662
BseYI	CCCAGC	1 cut(s)	1903
BsgI	GTGCAG	2 cut(s)	1269, 1374
Bsh1236I	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
Bsh1285I	CGRYCG	2 cut(s)	1207, 1230
BshNI	GGYRCC	3 cut(s)	380, 935, 1718
BshTI	ACCGGT	2 cut(s)	1097, 1399
BsiEI	CGRYCG	2 cut(s)	1207, 1230
BsiHKCI	CYCGRG	1 cut(s)	555
BsiWI	CGTACG	1 cut(s)	840
BslFI	GGGAC	3 cut(s)	799, 1387, 1555
BslI	CCNNNNNNNGG	5 cut(s)	932, 1144, 1567, 1702, 2141
BsmAI	GTCTC	5 cut(s)	11, 315, 588, 1446, 1614
BsmBI	CGTCTC	1 cut(s)	588
BsmFI	GGGAC	3 cut(s)	799, 1387, 1555
BsmI	GAATGC	4 cut(s)	317, 357, 1222, 1351
Bso31I	GGTCTC	2 cut(s)	315, 1614
BsoBI	CYCGRG	1 cut(s)	555
Bsp119I	TTCGAA	1 cut(s)	2072
Bsp120I	GGGCCC	2 cut(s)	922, 1593
Bsp1286I	GDGCHC	2 cut(s)	926, 1597
Bsp1407I	TGTACA	1 cut(s)	784
Bsp19I	CCATGG	3 cut(s)	445, 607, 1054
Bsp68I	TCGCGA	2 cut(s)	1423, 1662
BspCNI	CTCAG	2 cut(s)	920, 1750
BspFNI	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
BspPI	GGATC	8 cut(s)	845, 858, 968, 1217, 1721, 1727, 1740, 1745
BspT104I	TTCGAA	1 cut(s)	2072
BspT107I	GGYRCC	3 cut(s)	380, 935, 1718
BspTI	CTTAAG	1 cut(s)	1772
BspTNI	GGTCTC	2 cut(s)	315, 1614
BsrDI	GCAATG	3 cut(s)	922, 1365, 1638
BsrFI	RCCGGY	4 cut(s)	767, 1097, 1399, 1915
BsrGI	TGTACA	1 cut(s)	784
BsrI	ACTGG	3 cut(s)	50, 1042, 1293
BssAI	RCCGGY	4 cut(s)	767, 1097, 1399, 1915
BssNI	GRCGYC	3 cut(s)	623, 795, 801
BssT1I	CCWWGG	3 cut(s)	445, 607, 1054
Bst2UI	CCWGG	3 cut(s)	353, 1700, 1755
Bst6I	CTCTTC	1 cut(s)	1284
BstACI	GRCGYC	3 cut(s)	623, 795, 801
BstAFI	CTTAAG	1 cut(s)	1772
BstAPI	GCANNNNNTGC	1 cut(s)	713
BstAUI	TGTACA	1 cut(s)	784
BstBAI	YACGTR	4 cut(s)	62, 1352, 1729, 2012
BstBI	TTCGAA	1 cut(s)	2072
BstC8I	GCNNGC	7 cut(s)	251, 922, 979, 1395, 1597, 1858, 2162
BstDEI	CTNAG	3 cut(s)	907, 1489, 1737
BstDSI	CCRYGG	7 cut(s)	445, 607, 956, 1054, 1369, 1641, 1886
BstF5I	GGATG	5 cut(s)	1076, 1134, 1544, 1786, 1957
BstFNI	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
BstH2I	RGCGCY	3 cut(s)	256, 1475, 1748
BstHHI	GCGC	7 cut(s)	255, 656, 751, 1004, 1365, 1474, 1747
BstMAI	GTCTC	5 cut(s)	11, 315, 588, 1446, 1614
BstMCI	CGRYCG	2 cut(s)	1207, 1230
BstMWI	GCNNNNNNNGC	7 cut(s)	250, 704, 713, 872, 921, 1355, 1872
BstNI	CCWGG	3 cut(s)	353, 1700, 1755
BstNSI	RCATGY	1 cut(s)	1860
BstPAI	GACNNNNGTC	1 cut(s)	947
BstSCI	CCNGG	5 cut(s)	351, 490, 1474, 1698, 1753
BstSFI	CTRYAG	1 cut(s)	721
BstSLI	GKGCMC	2 cut(s)	926, 1597
BstSNI	TACGTA	1 cut(s)	2012
BstUI	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
BstV1I	GCAGC	5 cut(s)	444, 470, 1367, 1564, 1662
BstX2I	RGATCY	2 cut(s)	850, 1732
BstXI	CCANNNNNNTGG	1 cut(s)	446
BstYI	RGATCY	2 cut(s)	850, 1732
Bsu36I	CCTNAGG	1 cut(s)	907
BtgI	CCRYGG	7 cut(s)	445, 607, 956, 1054, 1369, 1641, 1886
BtgZI	GCGATG	2 cut(s)	847, 1676
BtrI	CACGTC	1 cut(s)	646
BtsCI	GGATG	5 cut(s)	1076, 1134, 1544, 1786, 1957
BtsIMutI	CAGTG	4 cut(s)	152, 192, 1035, 1286
BtuMI	TCGCGA	2 cut(s)	1423, 1662
Cac8I	GCNNGC	7 cut(s)	251, 922, 979, 1395, 1597, 1858, 2162
CfoI	GCGC	7 cut(s)	255, 656, 751, 1004, 1365, 1474, 1747
Cfr10I	RCCGGY	4 cut(s)	767, 1097, 1399, 1915
Cfr13I	GGNCC	9 cut(s)	455, 697, 922, 923, 1147, 1427, 1593, 1594, 1670
CseI	GACGC	4 cut(s)	612, 784, 1794, 1939
CsiI	ACCWGGT	1 cut(s)	1698
Csp6I	GTAC	5 cut(s)	133, 761, 785, 841, 2009
CspAI	ACCGGT	2 cut(s)	1097, 1399
CspCI	CAANNNNNGTGG	2 cut(s)	1987, 2022
CviQI	GTAC	5 cut(s)	133, 761, 785, 841, 2009
DdeI	CTNAG	3 cut(s)	907, 1489, 1737
DraIII	CACNNNGTG	2 cut(s)	65, 1702
DrdI	GACNNNNNNGTC	1 cut(s)	1549
DriI	GACNNNNNGTC	3 cut(s)	644, 716, 1417
DseDI	GACNNNNNNGTC	1 cut(s)	1549
EaeI	YGGCCR	7 cut(s)	419, 604, 1024, 1064, 1499, 1937, 2158
Eam1104I	CTCTTC	1 cut(s)	1284
Eam1105I	GACNNNNNGTC	3 cut(s)	644, 716, 1417
EarI	CTCTTC	1 cut(s)	1284
EciI	GGCGGA	1 cut(s)	202
Eco105I	TACGTA	1 cut(s)	2012
Eco130I	CCWWGG	3 cut(s)	445, 607, 1054
Eco24I	GRGCYC	2 cut(s)	926, 1597
Eco31I	GGTCTC	2 cut(s)	315, 1614
Eco47I	GGWCC	3 cut(s)	455, 1147, 1427
Eco57I	CTGAAG	2 cut(s)	597, 1215
Eco72I	CACGTG	2 cut(s)	1352, 1729
Eco81I	CCTNAGG	1 cut(s)	907
Eco88I	CYCGRG	1 cut(s)	555
EcoO109I	RGGNCCY	2 cut(s)	1427, 1593
EcoRII	CCWGG	3 cut(s)	351, 1698, 1753
EcoT14I	CCWWGG	3 cut(s)	445, 607, 1054
EcoT22I	ATGCAT	1 cut(s)	1112
EcoT38I	GRGCYC	2 cut(s)	926, 1597
ErhI	CCWWGG	3 cut(s)	445, 607, 1054
Esp3I	CGTCTC	1 cut(s)	588
FalI	AAGNNNNNCTT	4 cut(s)	643, 675, 696, 728
FaqI	GGGAC	3 cut(s)	799, 1387, 1555
FauI	CCCGC	3 cut(s)	913, 1604, 1621
FauNDI	CATATG	1 cut(s)	416
FbaI	TGATCA	2 cut(s)	1032, 1620
FblI	GTMKAC	3 cut(s)	186, 720, 798
FokI	GGATG	5 cut(s)	1063, 1121, 1531, 1793, 1964
FriOI	GRGCYC	2 cut(s)	926, 1597
FspBI	CTAG	4 cut(s)	306, 591, 1602, 1679
FspI	TGCGCA	1 cut(s)	750
GlaI	GCGC	7 cut(s)	254, 655, 750, 1003, 1364, 1473, 1746
GsaI	CCCAGC	1 cut(s)	1907
HaeII	RGCGCY	3 cut(s)	256, 1475, 1748
HgaI	GACGC	4 cut(s)	612, 784, 1794, 1939
HhaI	GCGC	7 cut(s)	255, 656, 751, 1004, 1365, 1474, 1747
Hin1I	GRCGYC	3 cut(s)	623, 795, 801
Hin6I	GCGC	7 cut(s)	253, 654, 749, 1002, 1363, 1472, 1745
HinP1I	GCGC	7 cut(s)	253, 654, 749, 1002, 1363, 1472, 1745
HincII	GTYRAC	3 cut(s)	627, 799, 1483
HindII	GTYRAC	3 cut(s)	627, 799, 1483
HinfI	GANTC	6 cut(s)	4, 84, 170, 285, 374, 827
HphI	GGTGA	8 cut(s)	214, 544, 1330, 1399, 1997, 2093, 2190, 2221
Hpy166II	GTNNAC	7 cut(s)	187, 627, 721, 799, 1093, 1483, 2109
Hpy188III	TCNNGA	7 cut(s)	690, 909, 1213, 1240, 1422, 1569, 1661
Hpy8I	GTNNAC	7 cut(s)	187, 627, 721, 799, 1093, 1483, 2109
Hpy99I	CGWCG	9 cut(s)	602, 650, 761, 800, 803, 974, 1423, 1667, 1810
HpyAV	CCTTC	5 cut(s)	474, 1066, 1735, 1942, 1982
HpyF10VI	GCNNNNNNNGC	7 cut(s)	250, 704, 713, 872, 921, 1355, 1872
HpyF3I	CTNAG	3 cut(s)	907, 1489, 1737
Hsp92I	GRCGYC	3 cut(s)	623, 795, 801
HspAI	GCGC	7 cut(s)	253, 654, 749, 1002, 1363, 1472, 1745
Ksp22I	TGATCA	2 cut(s)	1032, 1620
LmnI	GCTCC	2 cut(s)	539, 1114
Lsp1109I	GCAGC	5 cut(s)	444, 470, 1367, 1564, 1662
LweI	GCATC	5 cut(s)	665, 695, 1085, 1143, 1699
MabI	ACCWGGT	1 cut(s)	1698
MaeI	CTAG	4 cut(s)	306, 591, 1602, 1679
MaeIII	GTNAC	9 cut(s)	278, 940, 1310, 1336, 1378, 1817, 1927, 1972, 2209
MboII	GAAGA	7 cut(s)	28, 576, 748, 1208, 1271, 2086, 2187
MflI	RGATCY	2 cut(s)	850, 1732
MhlI	GDGCHC	2 cut(s)	926, 1597
MlsI	TGGCCA	4 cut(s)	421, 606, 1939, 2160
MluCI	AATT	7 cut(s)	21, 995, 1171, 1505, 1810, 1956, 2085
MluNI	TGGCCA	4 cut(s)	421, 606, 1939, 2160
MlyI	GAGTC	5 cut(s)	13, 93, 164, 279, 821
MmeI	TCCRAC	3 cut(s)	628, 780, 1210
Mox20I	TGGCCA	4 cut(s)	421, 606, 1939, 2160
Mph1103I	ATGCAT	1 cut(s)	1112
MroXI	GAANNNNTTC	1 cut(s)	1874
MscI	TGGCCA	4 cut(s)	421, 606, 1939, 2160
MseI	TTAA	2 cut(s)	20, 1773
MslI	CAYNNNNRTG	3 cut(s)	444, 809, 2145
Msp20I	TGGCCA	4 cut(s)	421, 606, 1939, 2160
MspA1I	CMGCKG	4 cut(s)	411, 483, 1675, 2164
MspCI	CTTAAG	1 cut(s)	1772
MspR9I	CCNGG	5 cut(s)	353, 492, 1476, 1700, 1755
Mva1269I	GAATGC	4 cut(s)	317, 357, 1222, 1351
MvaI	CCWGG	3 cut(s)	353, 1700, 1755
MvnI	CGCG	6 cut(s)	1002, 1029, 1423, 1662, 1933, 2137
MwoI	GCNNNNNNNGC	7 cut(s)	250, 704, 713, 872, 921, 1355, 1872
NciI	CCSGG	2 cut(s)	492, 1476
NcoI	CCATGG	3 cut(s)	445, 607, 1054
NdeI	CATATG	1 cut(s)	416
NmeAIII	GCCGAG	3 cut(s)	303, 645, 798
NmuCI	GTSAC	7 cut(s)	278, 940, 1310, 1336, 1817, 1927, 2209
NruI	TCGCGA	2 cut(s)	1423, 1662
NsbI	TGCGCA	1 cut(s)	750
NsiI	ATGCAT	1 cut(s)	1112
NspI	RCATGY	1 cut(s)	1860
NspV	TTCGAA	1 cut(s)	2072
PaeI	GCATGC	1 cut(s)	1860
PcsI	WCGNNNNNNNCGW	6 cut(s)	345, 402, 771, 798, 879, 1306
PctI	GAATGC	4 cut(s)	317, 357, 1222, 1351
PdmI	GAANNNNTTC	1 cut(s)	1874
PfeI	GAWTC	1 cut(s)	374
Pfl23II	CGTACG	1 cut(s)	840
PflFI	GACNNNGTC	2 cut(s)	794, 1145
PflMI	CCANNNNNTGG	1 cut(s)	1702
PinAI	ACCGGT	2 cut(s)	1097, 1399
PleI	GAGTC	5 cut(s)	12, 92, 164, 279, 821
PmaCI	CACGTG	2 cut(s)	1352, 1729
PmlI	CACGTG	2 cut(s)	1352, 1729
PpsI	GAGTC	5 cut(s)	12, 92, 164, 279, 821
Ppu21I	YACGTR	4 cut(s)	62, 1352, 1729, 2012
PpuMI	RGGWCCY	1 cut(s)	1427
PshAI	GACNNNNGTC	1 cut(s)	947
Psp1406I	AACGTT	1 cut(s)	2190
Psp5II	RGGWCCY	1 cut(s)	1427
Psp6I	CCWGG	3 cut(s)	351, 1698, 1753
PspCI	CACGTG	2 cut(s)	1352, 1729
PspFI	CCCAGC	1 cut(s)	1903
PspGI	CCWGG	3 cut(s)	351, 1698, 1753
PspLI	CGTACG	1 cut(s)	840
PspOMI	GGGCCC	2 cut(s)	922, 1593
PspPI	GGNCC	9 cut(s)	455, 697, 922, 923, 1147, 1427, 1593, 1594, 1670
PspPPI	RGGWCCY	1 cut(s)	1427
PsrI	GAACNNNNNNTAC	2 cut(s)	768, 800
PsuI	RGATCY	2 cut(s)	850, 1732
PsyI	GACNNNGTC	2 cut(s)	794, 1145
PvuII	CAGCTG	1 cut(s)	2164
RruI	TCGCGA	2 cut(s)	1423, 1662
RsaI	GTAC	5 cut(s)	134, 762, 786, 842, 2010
RsaNI	GTAC	5 cut(s)	133, 761, 785, 841, 2009
RseI	CAYNNNNRTG	3 cut(s)	444, 809, 2145
SalI	GTCGAC	1 cut(s)	797
SaqAI	TTAA	2 cut(s)	20, 1773
Sau96I	GGNCC	9 cut(s)	455, 697, 922, 923, 1147, 1427, 1593, 1594, 1670
SchI	GAGTC	5 cut(s)	13, 93, 164, 279, 821
ScrFI	CCNGG	5 cut(s)	353, 492, 1476, 1700, 1755
SduI	GDGCHC	2 cut(s)	926, 1597
SexAI	ACCWGGT	1 cut(s)	1698
SfaNI	GCATC	5 cut(s)	665, 695, 1085, 1143, 1699
SfcI	CTRYAG	1 cut(s)	721
SfuI	TTCGAA	1 cut(s)	2072
SgrAI	CRCCGGYG	2 cut(s)	1097, 1399
SgrDI	CGTCGACG	1 cut(s)	797
SinI	GGWCC	3 cut(s)	455, 1147, 1427
SmiMI	CAYNNNNRTG	3 cut(s)	444, 809, 2145
SmlI	CTYRAG	1 cut(s)	1772
SmoI	CTYRAG	1 cut(s)	1772
SnaBI	TACGTA	1 cut(s)	2012
SphI	GCATGC	1 cut(s)	1860
Sse9I	AATT	7 cut(s)	21, 995, 1171, 1505, 1810, 1956, 2085
SspMI	CTAG	4 cut(s)	306, 591, 1602, 1679
StyD4I	CCNGG	5 cut(s)	351, 490, 1474, 1698, 1753
StyI	CCWWGG	3 cut(s)	445, 607, 1054
TaqI	TCGA	8 cut(s)	405, 774, 798, 1203, 1509, 1808, 1946, 2072
TasI	AATT	7 cut(s)	21, 995, 1171, 1505, 1810, 1956, 2085
TatI	WGTACW	1 cut(s)	784
TfiI	GAWTC	1 cut(s)	374
Tru1I	TTAA	2 cut(s)	20, 1773
Tru9I	TTAA	2 cut(s)	20, 1773
TscAI	CASTG	4 cut(s)	159, 199, 1042, 1293
TseFI	GTSAC	7 cut(s)	278, 940, 1310, 1336, 1817, 1927, 2209
TseI	GCWGC	5 cut(s)	432, 483, 1355, 1577, 1675
Tsp45I	GTSAC	7 cut(s)	278, 940, 1310, 1336, 1817, 1927, 2209
TspDTI	ATGAA	4 cut(s)	64, 141, 191, 1346
TspGWI	ACGGA	4 cut(s)	266, 1358, 1434, 1680
TspRI	CASTG	4 cut(s)	159, 199, 1042, 1293
Tth111I	GACNNNGTC	2 cut(s)	794, 1145
Van91I	CCANNNNNTGG	1 cut(s)	1702
Vha464I	CTTAAG	1 cut(s)	1772
VpaK11BI	GGWCC	3 cut(s)	455, 1147, 1427
XapI	RAATTY	2 cut(s)	995, 2085
XceI	RCATGY	1 cut(s)	1860
XmiI	GTMKAC	3 cut(s)	186, 720, 798
XmnI	GAANNNNTTC	1 cut(s)	1874
XspI	CTAG	4 cut(s)	306, 591, 1602, 1679
ZraI	GACGTC	1 cut(s)	802
Zsp2I	ATGCAT	1 cut(s)	1112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.