Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005816

Physical Location & Seq

Genomic Coordinates Reverse (-)

25459097 .. 25464302

Gene Structure 5206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0245000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGGTATTGCCAACTCTAAAAGCGAGAAGGACGCAGCTCTGTGTCTCTGTAGAGAGCGCAAAAGGTTCATCAAGCAAGCAATTGATTCAAGGTATGCTTTAGCAGCTTCTCACGTCTCTTACACCAACTCTCTTCGAAGCATTGGCATCGCTCTCCGGCGTTACGCCGAGGCCGAGGTGTTGATAGAGTCCTCTCTGTCCACCTCAGACAAAACCCCATCACACTCCTCCTACCCTTCGCCGTCGCCGTCCCCGAAGATTTCGGGCTCCCCCATGCACAATGAGAGGCCCATTTCGCCTCCGGGGGTGGCGACTTTGAGTTACATGAGGTCAGGAGGAGGTAGTGCTGCTGTGACCATGAGGTTCAATCCTGTTAATAGTAGTAGATATGTGGATGAGGAGATTCCACTGCCGCCGCCGCCGCCGCCGCTGCTGGGGGAGGCGGAGGCAGATTCTTCTTGGGATTACTTTGATCCTGTTGATGCTGAAGAGAGTGAGAGCTTTAGGTTTGTGGGGAGTAGTGGAGTGGATGTGAATTGTGATGATGTCAAAGGGTGGAGACAGATGAGGAGTGAAGAAGGTAACTATAGTGTGGGGGAGAGTAGGGGAAGATGGGCAAAGGCGGGAAGTAATGAACTTGATGAAGGAACTAAGTTTTTGGAGCAGAGGAATTGCGAAGATTCGGGTGATTTGACTCAAAATGAAAGTGAAGAGCATAATGCCAATACACTGAGCTCGGGAGGAGTTGATGGTGGATCCAGACAGTTAGTGGTGGGACAACGAAACGCCAATGGGGATTCAAAGAGGGAGAAGAGTGTAGGAGAGAAGGATTTATGTGATGAGAGAGAGGACCCTTCGGACTTTATTACCCACAGAGCTAAAGACTTTCTTTCGAGCATAAAGGATATTGATAATCGGTTTCTCAAAGCTTCGGAATCTGGGAGAGAGGTCTCAAGGATGCTTGAGTCGAATAAAATCCGGGTTGGATATTCGGTGGCAAAAGGTAGGTCATCAGGGTTGGCTCTTCTTGGGACTTTCCAGCTTGTTTGTTGCCAGGGAAAGACTTCACTTGTTTCTAGTGAACCTGAACATGTTACCAAAGTAATTACTTGGAAGCGGACAACATCTTCGAGATCTTCATCATCAAGGAATCCTCTTGCCACAGCATCAAAAGATGATGCTGATGATAGTGGAAGTGACTTTATCGAAGAGTTCTGTATGATTGCAGGAAGCCATTCCTCCACTCTAGATAGACTGTATGCATGGGAAAGAAAGCTATATGATGAAGTGAAGGCTAGTGAATCTATCAGGAAGGTGTATGATGTGAAGTGTGATCAACTTAGGAATCAATTTGCAAAGGATTGTAGCAGTCAAATTATTGATAAAACCAGGGCAACTGTAAAGGACCTACATTCACGAATAAGAGTGGCACTTCATGCTGTTGATTCAATATCAAAGCGGATTGAGAAAATGAGGGATGATGAATTGCTTCCGCAACTTTTAGAACTTAATCAGGGATTGACCAGGATGTGGAAGGCTATGCTTGAATGCCATCATGCACAATATATTACTATCTCGCTCGCGTATCATTCAAAGAGCTCAACTGTAACTTCCCAAGGAGACACCCGCAGGAATATCATGGCTCAACTTTTGGAGGAGATTGAATGCTTTGGCCTAAGCTTTGCAAACTGGATCAACAGCCTTACTTCATATGTGGAAGCTCTGAATGGTTGGCTGCAACACTGCATTATGCAACCTCAGGAGCGTTCCAAAAGCAGAAGGCCATTCTCCTTCTCCCCTCGTCGAGCTATTGCCCCACCTATATTTGTTCTCTTTCGTGATTGGGCAGCTGGGATCAGAGGATTGCCATCTACTGAAGTTACTGATGCAGTCAGAACCTTCTTATCAGATCTGCGTCATATGATGGAACAAGCAAGCACACAGAAACGACAGAGGGCAGCTGATGCAAACAACGGAGAATCAGAGAACAAAGATGATGAGGAGAACAAAGAAGATGAGAATTGTGAAGAATCGTCTTCGAACCTGAGCTGCATACATTCGAGTTTGACAAAGGTTCTGGATAGACTGACTAAATTTTCCGAGGCATCATTGAAGATGTATGAGGATATCAGACAGAAAAGCGAAGCAGCAAGAAATGCATATTCAAACTTCAACAGGCCAAATAGACACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

730

Amino Acids

81.53

Weight (kDa)

6.06

Isoelectric Point (pI)

59.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	5.2e-24	Protein of unknown function (DUF630)
DUF632	PF04782	297 - 639	3.2e-110	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63610
fragaria_vesca	FvH4_1g25340 FvH4_1g25340 FvH4_1g25350
malus_domestica	MD00G1110700.v1.1 MD15G1137900.v1.1
prunus_persica	Prupe.4G280700_v2.0.a1
pyrus_communis	pycom1146g00040
rosa_chinensis	RchiOBHm_Chr2g0123381 RchiOBHm_Chr2g0123391
rosa_laevigata	RLG00000018746
rosa_multiflora	Rmu_sc0004330.1_g000003 Rmu_sc0024478.1_g000001 Rmu_sc0041165.1_g000001 Rmu_ssc0000345.1_g000001
rosa_roxburghii	Rroxscaffold_2G00120740 Rroxscaffold_2G00120750
rosa_rugosa	Rorug02G0244900 Rorug02G0244900 Rorug02G0245000
rosa_samantha	Rh2AG303700 Rh2BG311800 Rh2CG290300 Rh2CG290400 Rh2DG327800 Rh2DG327900
rosa_wichuraiana	Rw2G024310 Rw2G024320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1530
AccII	CGCG	1 cut(s)	1583
AclWI	GGATC	5 cut(s)	467, 750, 763, 1700, 1862
AcsI	RAATTY	1 cut(s)	2093
AcuI	CTGAAG	2 cut(s)	507, 1896
AfiI	CCNNNNNNNGG	2 cut(s)	434, 1530
AflIII	ACRYGT	1 cut(s)	1090
AjiI	CACGTC	1 cut(s)	115
AjnI	CCWGG	3 cut(s)	1053, 1388, 1523
Alw21I	GWGCWC	2 cut(s)	737, 1601
Alw26I	GTCTC	5 cut(s)	50, 121, 553, 955, 1614
AlwI	GGATC	5 cut(s)	467, 750, 763, 1700, 1862
Ama87I	CYCGRG	1 cut(s)	736
AoxI	GGCC	5 cut(s)	171, 287, 1672, 1781, 2177
ApeKI	GCWGC	9 cut(s)	35, 104, 347, 430, 1735, 1847, 1958, 2049, 2147
ApoI	RAATTY	1 cut(s)	2093
ArsI	GACNNNNNNTTYG	4 cut(s)	992, 1024, 1111, 1143
Asp700I	GAANNNNTTC	3 cut(s)	1063, 1234, 1488
AspLEI	GCGC	1 cut(s)	60
AspS9I	GGNCC	3 cut(s)	288, 850, 1405
AsuC2I	CCSGG	2 cut(s)	303, 980
AsuHPI	GGTGA	1 cut(s)	698
AsuII	TTCGAA	2 cut(s)	136, 2039
AvaI	CYCGRG	1 cut(s)	736
AvaII	GGWCC	2 cut(s)	850, 1405
AxyI	CCTNAGG	1 cut(s)	1758
BamHI	GGATCC	1 cut(s)	755
BanII	GRGCYC	3 cut(s)	269, 737, 1601
BbsI	GAAGAC	1 cut(s)	2028
Bbv12I	GWGCWC	2 cut(s)	737, 1601
BbvI	GCAGC	9 cut(s)	47, 116, 334, 417, 1722, 1859, 1970, 2036, 2159
BccI	CCATC	6 cut(s)	226, 606, 743, 1560, 1876, 1918
BceAI	ACGGC	2 cut(s)	226, 232
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	3 cut(s)	1055, 1390, 1525
BclI	TGATCA	1 cut(s)	1333
BcnI	CCSGG	2 cut(s)	303, 980
BcoDI	GTCTC	5 cut(s)	50, 121, 553, 955, 1614
BfaI	CTAG	4 cut(s)	1077, 1247, 1296, 2191
BfmI	CTRYAG	2 cut(s)	49, 586
BglII	AGATCT	2 cut(s)	1133, 1909
Bme1390I	CCNGG	5 cut(s)	303, 980, 1055, 1390, 1525
Bme18I	GGWCC	2 cut(s)	850, 1405
BmeT110I	CYCGRG	1 cut(s)	736
BmgBI	CACGTC	1 cut(s)	115
BmgT120I	GGNCC	3 cut(s)	288, 850, 1405
BmiI	GGNNCC	3 cut(s)	268, 757, 852
BmrFI	CCNGG	5 cut(s)	303, 980, 1055, 1390, 1525
BmsI	GCATC	8 cut(s)	156, 472, 948, 1168, 1175, 1876, 1954, 2114
BpiI	GAAGAC	1 cut(s)	2028
Bpu10I	CCTNAGC	2 cut(s)	1676, 2045
Bpu14I	TTCGAA	2 cut(s)	136, 2039
BpuEI	CTTGAG	2 cut(s)	937, 983
BpuMI	CCSGG	2 cut(s)	303, 980
BsaBI	GATNNNNATC	2 cut(s)	1138, 1867
BsaI	GGTCTC	1 cut(s)	955
BsaJI	CCNNGG	7 cut(s)	168, 174, 302, 1054, 1389, 1615, 2100
BsaXI	ACNNNNNCTCC	2 cut(s)	516, 546
Bsc4I	CCNNNNNNNGG	2 cut(s)	434, 1530
Bse1I	ACTGG	1 cut(s)	1694
Bse21I	CCTNAGG	1 cut(s)	1758
Bse8I	GATNNNNATC	2 cut(s)	1138, 1867
BseBI	CCWGG	3 cut(s)	1055, 1390, 1525
BseDI	CCNNGG	7 cut(s)	168, 174, 302, 1054, 1389, 1615, 2100
BseGI	GGATG	5 cut(s)	400, 535, 963, 1483, 1533
BseJI	GATNNNNATC	2 cut(s)	1138, 1867
BseLI	CCNNNNNNNGG	2 cut(s)	434, 1530
BseMII	CTCAG	4 cut(s)	219, 722, 1772, 2036
BseNI	ACTGG	1 cut(s)	1694
BseRI	GAGGAG	7 cut(s)	217, 351, 413, 583, 756, 1670, 2015
BseXI	GCAGC	9 cut(s)	47, 116, 334, 417, 1722, 1859, 1970, 2036, 2159
BseYI	CCCAGC	2 cut(s)	433, 1850
Bsh1236I	CGCG	1 cut(s)	1583
BshFI	GGCC	5 cut(s)	173, 289, 1674, 1783, 2179
BsiHKAI	GWGCWC	2 cut(s)	737, 1601
BsiHKCI	CYCGRG	1 cut(s)	736
BsiSI	CCGG	3 cut(s)	157, 302, 979
BslFI	GGGAC	3 cut(s)	235, 789, 1045
BslI	CCNNNNNNNGG	2 cut(s)	434, 1530
BsmAI	GTCTC	5 cut(s)	50, 121, 553, 955, 1614
BsmBI	CGTCTC	1 cut(s)	121
BsmFI	GGGAC	3 cut(s)	235, 789, 1045
BsmI	GAATGC	2 cut(s)	1553, 1670
BsnI	GGCC	5 cut(s)	173, 289, 1674, 1783, 2179
Bso31I	GGTCTC	1 cut(s)	955
BsoBI	CYCGRG	1 cut(s)	736
Bsp119I	TTCGAA	2 cut(s)	136, 2039
Bsp1286I	GDGCHC	3 cut(s)	269, 737, 1601
Bsp143I	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
BspANI	GGCC	5 cut(s)	173, 289, 1674, 1783, 2179
BspCNI	CTCAG	4 cut(s)	218, 723, 1771, 2037
BspFNI	CGCG	1 cut(s)	1583
BspLI	GGNNCC	3 cut(s)	268, 757, 852
BspPI	GGATC	5 cut(s)	467, 750, 763, 1700, 1862
BspQI	GCTCTTC	2 cut(s)	705, 1029
BspT104I	TTCGAA	2 cut(s)	136, 2039
BspTNI	GGTCTC	1 cut(s)	955
BsrI	ACTGG	1 cut(s)	1694
BssECI	CCNNGG	7 cut(s)	168, 174, 302, 1054, 1389, 1615, 2100
BssMI	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
BssT1I	CCWWGG	1 cut(s)	1615
Bst2UI	CCWGG	3 cut(s)	1055, 1390, 1525
Bst4CI	ACNGT	4 cut(s)	765, 1257, 1399, 1606
Bst6I	CTCTTC	6 cut(s)	138, 483, 705, 806, 1029, 1203
BstAPI	GCANNNNNTGC	3 cut(s)	1436, 1964, 2156
BstBI	TTCGAA	2 cut(s)	136, 2039
BstC8I	GCNNGC	3 cut(s)	78, 1581, 1936
BstDEI	CTNAG	7 cut(s)	205, 651, 731, 1340, 1676, 1758, 2045
BstF5I	GGATG	5 cut(s)	400, 535, 963, 1483, 1533
BstFNI	CGCG	1 cut(s)	1583
BstHHI	GCGC	1 cut(s)	60
BstKTI	GATC	7 cut(s)	475, 758, 1136, 1336, 1695, 1857, 1912
BstMAI	GTCTC	5 cut(s)	50, 121, 553, 955, 1614
BstMBI	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
BstNI	CCWGG	3 cut(s)	1055, 1390, 1525
BstNSI	RCATGY	1 cut(s)	1094
BstSCI	CCNGG	5 cut(s)	301, 978, 1053, 1388, 1523
BstSFI	CTRYAG	2 cut(s)	49, 586
BstUI	CGCG	1 cut(s)	1583
BstV1I	GCAGC	9 cut(s)	47, 116, 334, 417, 1722, 1859, 1970, 2036, 2159
BstV2I	GAAGAC	1 cut(s)	2028
BstX2I	RGATCY	3 cut(s)	755, 1133, 1909
BstYI	RGATCY	3 cut(s)	755, 1133, 1909
Bsu36I	CCTNAGG	1 cut(s)	1758
BsuRI	GGCC	5 cut(s)	173, 289, 1674, 1783, 2179
BtgZI	GCGATG	1 cut(s)	133
BtrI	CACGTC	1 cut(s)	115
BtsCI	GGATG	5 cut(s)	400, 535, 963, 1483, 1533
BtsI	GCAGTG	2 cut(s)	407, 1741
BtsIMutI	CAGTG	3 cut(s)	407, 728, 1741
Cac8I	GCNNGC	3 cut(s)	78, 1581, 1936
CfoI	GCGC	1 cut(s)	60
Cfr13I	GGNCC	3 cut(s)	288, 850, 1405
CseI	GACGC	2 cut(s)	41, 1904
CviAII	CATG	8 cut(s)	274, 325, 358, 1091, 1263, 1436, 1556, 1639
DdeI	CTNAG	7 cut(s)	205, 651, 731, 1340, 1676, 1758, 2045
DpnI	GATC	7 cut(s)	474, 757, 1135, 1335, 1694, 1856, 1911
DpnII	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
Eam1104I	CTCTTC	6 cut(s)	138, 483, 705, 806, 1029, 1203
EarI	CTCTTC	6 cut(s)	138, 483, 705, 806, 1029, 1203
EciI	GGCGGA	1 cut(s)	458
Ecl136II	GAGCTC	2 cut(s)	735, 1599
Eco130I	CCWWGG	1 cut(s)	1615
Eco24I	GRGCYC	3 cut(s)	269, 737, 1601
Eco31I	GGTCTC	1 cut(s)	955
Eco32I	GATATC	1 cut(s)	2128
Eco47I	GGWCC	2 cut(s)	850, 1405
Eco53kI	GAGCTC	2 cut(s)	735, 1599
Eco57I	CTGAAG	2 cut(s)	507, 1896
Eco81I	CCTNAGG	1 cut(s)	1758
Eco88I	CYCGRG	1 cut(s)	736
EcoICRI	GAGCTC	2 cut(s)	735, 1599
EcoO109I	RGGNCCY	2 cut(s)	850, 1405
EcoRII	CCWGG	3 cut(s)	1053, 1388, 1523
EcoRV	GATATC	1 cut(s)	2128
EcoT14I	CCWWGG	1 cut(s)	1615
EcoT22I	ATGCAT	2 cut(s)	1264, 2161
EcoT38I	GRGCYC	3 cut(s)	269, 737, 1601
ErhI	CCWWGG	1 cut(s)	1615
Esp3I	CGTCTC	1 cut(s)	121
FaeI	CATG	8 cut(s)	277, 328, 361, 1094, 1266, 1439, 1559, 1642
FalI	AAGNNNNNCTT	4 cut(s)	82, 114, 873, 905
FaqI	GGGAC	3 cut(s)	235, 789, 1045
FatI	CATG	8 cut(s)	273, 324, 357, 1090, 1262, 1435, 1555, 1638
FauI	CCCGC	2 cut(s)	616, 1634
FauNDI	CATATG	2 cut(s)	1711, 1920
FbaI	TGATCA	1 cut(s)	1333
FokI	GGATG	5 cut(s)	407, 542, 970, 1490, 1540
FriOI	GRGCYC	3 cut(s)	269, 737, 1601
FspBI	CTAG	4 cut(s)	1077, 1247, 1296, 2191
GlaI	GCGC	1 cut(s)	59
GsaI	CCCAGC	2 cut(s)	437, 1854
HaeIII	GGCC	5 cut(s)	173, 289, 1674, 1783, 2179
HapII	CCGG	3 cut(s)	157, 302, 979
HgaI	GACGC	2 cut(s)	41, 1904
HhaI	GCGC	1 cut(s)	60
Hin1II	CATG	8 cut(s)	277, 328, 361, 1094, 1266, 1439, 1559, 1642
Hin6I	GCGC	1 cut(s)	58
HinP1I	GCGC	1 cut(s)	58
HindIII	AAGCTT	2 cut(s)	927, 1678
HpaII	CCGG	3 cut(s)	157, 302, 979
HphI	GGTGA	1 cut(s)	698
Hpy166II	GTNNAC	2 cut(s)	201, 1082
Hpy8I	GTNNAC	2 cut(s)	201, 1082
Hpy99I	CGWCG	2 cut(s)	247, 1806
HpyCH4III	ACNGT	4 cut(s)	765, 1257, 1399, 1606
HpyCH4IV	ACGT	1 cut(s)	114
HpyF3I	CTNAG	7 cut(s)	205, 651, 731, 1340, 1676, 1758, 2045
HpySE526I	ACGT	1 cut(s)	114
Hsp92II	CATG	8 cut(s)	277, 328, 361, 1094, 1266, 1439, 1559, 1642
HspAI	GCGC	1 cut(s)	58
Ksp22I	TGATCA	1 cut(s)	1333
Kzo9I	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
LguI	GCTCTTC	2 cut(s)	705, 1029
LmnI	GCTCC	3 cut(s)	272, 661, 1762
Lsp1109I	GCAGC	9 cut(s)	47, 116, 334, 417, 1722, 1859, 1970, 2036, 2159
LweI	GCATC	8 cut(s)	156, 472, 948, 1168, 1175, 1876, 1954, 2114
MaeI	CTAG	4 cut(s)	1077, 1247, 1296, 2191
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	8 cut(s)	161, 320, 352, 581, 1093, 1196, 1606, 1879
MalI	GATC	7 cut(s)	474, 757, 1135, 1335, 1694, 1856, 1911
MboI	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
MfeI	CAATTG	1 cut(s)	81
MflI	RGATCY	3 cut(s)	755, 1133, 1909
MhlI	GDGCHC	3 cut(s)	269, 737, 1601
MluCI	AATT	9 cut(s)	81, 535, 670, 1104, 1349, 1374, 1484, 2020, 2093
MlyI	GAGTC	3 cut(s)	197, 688, 974
MmeI	TCCRAC	1 cut(s)	964
Mph1103I	ATGCAT	2 cut(s)	1264, 2161
MroXI	GAANNNNTTC	3 cut(s)	1063, 1234, 1488
MseI	TTAA	2 cut(s)	375, 1509
MspA1I	CMGCKG	3 cut(s)	430, 1850, 1961
MspI	CCGG	3 cut(s)	157, 302, 979
MspR9I	CCNGG	5 cut(s)	303, 980, 1055, 1390, 1525
MunI	CAATTG	1 cut(s)	81
Mva1269I	GAATGC	2 cut(s)	1553, 1670
MvaI	CCWGG	3 cut(s)	1055, 1390, 1525
MvnI	CGCG	1 cut(s)	1583
NciI	CCSGG	2 cut(s)	303, 980
NdeI	CATATG	2 cut(s)	1711, 1920
NdeII	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
NlaIII	CATG	8 cut(s)	277, 328, 361, 1094, 1266, 1439, 1559, 1642
NlaIV	GGNNCC	3 cut(s)	268, 757, 852
NmeAIII	GCCGAG	2 cut(s)	193, 199
NmuCI	GTSAC	2 cut(s)	352, 1196
NsiI	ATGCAT	2 cut(s)	1264, 2161
NspI	RCATGY	1 cut(s)	1094
NspV	TTCGAA	2 cut(s)	136, 2039
PciI	ACATGT	1 cut(s)	1090
PciSI	GCTCTTC	2 cut(s)	705, 1029
PcsI	WCGNNNNNNNCGW	3 cut(s)	171, 245, 251
PctI	GAATGC	2 cut(s)	1553, 1670
PdmI	GAANNNNTTC	3 cut(s)	1063, 1234, 1488
PflMI	CCANNNNNTGG	1 cut(s)	1530
PleI	GAGTC	3 cut(s)	196, 688, 973
PpsI	GAGTC	3 cut(s)	196, 688, 973
PpuMI	RGGWCCY	2 cut(s)	850, 1405
PscI	ACATGT	1 cut(s)	1090
Psp124BI	GAGCTC	2 cut(s)	737, 1601
Psp5II	RGGWCCY	2 cut(s)	850, 1405
Psp6I	CCWGG	3 cut(s)	1053, 1388, 1523
PspFI	CCCAGC	2 cut(s)	433, 1850
PspGI	CCWGG	3 cut(s)	1053, 1388, 1523
PspN4I	GGNNCC	3 cut(s)	268, 757, 852
PspPI	GGNCC	3 cut(s)	288, 850, 1405
PspPPI	RGGWCCY	2 cut(s)	850, 1405
PsuI	RGATCY	3 cut(s)	755, 1133, 1909
PvuII	CAGCTG	2 cut(s)	1850, 1961
SacI	GAGCTC	2 cut(s)	737, 1601
SapI	GCTCTTC	2 cut(s)	705, 1029
SaqAI	TTAA	2 cut(s)	375, 1509
Sau3AI	GATC	7 cut(s)	472, 755, 1133, 1333, 1692, 1854, 1909
Sau96I	GGNCC	3 cut(s)	288, 850, 1405
SchI	GAGTC	3 cut(s)	197, 688, 974
ScrFI	CCNGG	5 cut(s)	303, 980, 1055, 1390, 1525
SduI	GDGCHC	3 cut(s)	269, 737, 1601
SfaNI	GCATC	8 cut(s)	156, 472, 948, 1168, 1175, 1876, 1954, 2114
SfcI	CTRYAG	2 cut(s)	49, 586
SfuI	TTCGAA	2 cut(s)	136, 2039
SinI	GGWCC	2 cut(s)	850, 1405
SmlI	CTYRAG	2 cut(s)	952, 962
SmoI	CTYRAG	2 cut(s)	952, 962
Sse9I	AATT	9 cut(s)	81, 535, 670, 1104, 1349, 1374, 1484, 2020, 2093
SspMI	CTAG	4 cut(s)	1077, 1247, 1296, 2191
SstI	GAGCTC	2 cut(s)	737, 1601
StyD4I	CCNGG	5 cut(s)	301, 978, 1053, 1388, 1523
StyI	CCWWGG	1 cut(s)	1615
TaaI	ACNGT	4 cut(s)	765, 1257, 1399, 1606
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	8 cut(s)	136, 893, 968, 1130, 1206, 1804, 2039, 2060
TasI	AATT	9 cut(s)	81, 535, 670, 1104, 1349, 1374, 1484, 2020, 2093
TauI	GCSGC	6 cut(s)	415, 418, 421, 424, 427, 430
Tru1I	TTAA	2 cut(s)	375, 1509
Tru9I	TTAA	2 cut(s)	375, 1509
TscAI	CASTG	3 cut(s)	414, 735, 1748
TseFI	GTSAC	2 cut(s)	352, 1196
TseI	GCWGC	9 cut(s)	35, 104, 347, 430, 1735, 1847, 1958, 2049, 2147
Tsp45I	GTSAC	2 cut(s)	352, 1196
TspDTI	ATGAA	9 cut(s)	58, 648, 657, 717, 1128, 1299, 1424, 1497, 1698
TspGWI	ACGGA	1 cut(s)	1989
TspRI	CASTG	3 cut(s)	414, 735, 1748
Van91I	CCANNNNNTGG	1 cut(s)	1530
VpaK11BI	GGWCC	2 cut(s)	850, 1405
XapI	RAATTY	1 cut(s)	2093
XbaI	TCTAGA	1 cut(s)	1246
XceI	RCATGY	1 cut(s)	1094
XcmI	CCANNNNNNNNNTGG	1 cut(s)	766
XmnI	GAANNNNTTC	3 cut(s)	1063, 1234, 1488
XspI	CTAG	4 cut(s)	1077, 1247, 1296, 2191
Zsp2I	ATGCAT	2 cut(s)	1264, 2161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.