Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000271.1

Orthogroup ID

OG0008324

Physical Location & Seq

Genomic Coordinates Reverse (-)

531 .. 3434

Gene Structure 2904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

atgattgcatgtacccagcctcgtagggtggctgcaatgtcagtgtctcgccgtgttgctgaagagatggatgttaccattggggaagaggttggttacagcattcgttttgaagactgcagcagtgccagaacagtattgaagtatctaacagatggtatgcttttaagagaagccatgacagatccactgttagaacgatacagtgtaataattcttgatgaggctcatgagaggactttagcaacagatgttctgtttgggcttctgaaggaagtattgaaaaatagacctgatatgaagctggttgttatgagtgctacacttgaggctgagaagtttcagggttatttcaacggtgcaccactaatgaaggttcctggcaggcttcatccagttgaaattttttacactgaggaacctgagagggactacctggaggcagcaattcgaactgttgtacagattcatatgtatgagactccaggagatatacttgtttttttaactggagaagaggagatagaagatgcatgccgcaaaatcaacaaagaaatttcaaacctgggtgatcaggttggtccagtgaaagtggtgcccctgtattcaactctccctccagctatgcagcagaaaatatttgacgctgctcctcctcccgcaacagaaggcggtcctgcaggaaggaaaattgtggtgtcaactaacattgcagaaacttctctgaccatagatgggatcgtgtatgttattgatccaggtttttctaaacagaaagtttataacccacgagtgcgtgttgaatccttgttggtatctccgatttctaaggctagtgcacatcagaggtcagggcgtgctggaagaactcagccaggcaaatgtttcagactatatactgagaaaagtttccataatgatcttgtacctcagacatatccagaaatactgagatcaaatcttgcaaatacggtgcttactttgaagaaactaggaatagatgatttggttcattttgattttatggatccccctgctccagagacattaatgagagcactcgaagttttgaattatttgggtgcattggatgatgatggtaacttgaccaagctgggtgagattatgagcgagttccctctagatcctcagatgtcaaagatgcttgttgttagccccgagtttaactgctcaaatgagattttgtcgatctctgccatgctttcagtacccaattgctttgtccggcctagggaggctcagaaagctgcagatgaagcaaaagctaggtttggacacatcgatggagatcatctcacactgctgaatgtgtatcatgcatacaagcaaaacaatgaagatccatcgtggtgctatgagaactttgtcaatcagagggcattgaagtctgcagacaatgttagacaacagctagtgcgcattatggctcggtttaatctccagctatgcagtactgattttaagagtcgggactactacatcaacatcagaaaggctatgctagctgggtatttcatgcaggtggctcatctggaacgcactggtcactaccttactgtgaaggataaccaagttgtacatttgcatccatcaaattgcttggatcacaagccagagtgggtgatttacaacgagtacgtcttaacgagcaggaattttatccgcacagtgacagatatccgtggtgaatggctagttgatatcgcaccacactactatgatttggccaactttccccagtgtgaggccaagcgagttcttgagaagctttacaggaagcgggacgacaaggaggataacagaaacagaaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

AAA_22 DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

611

Amino Acids

69.52

Weight (kDa)

5.99

Isoelectric Point (pI)

42.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	151 - 290	9.8e-10	Helicase conserved C-terminal domain
WHD_HA2	PF04408	353 - 381	1.9e-11	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	382 - 441	9e-15	Helicase associated domain (HA2), ratchet-like
OB_NTP_bind	PF07717	503 - 579	6.8e-25	Oligonucleotide/oligosaccharide-binding (OB)-fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47250 AT3G62310 AT3G62310 AT3G62310
fragaria_vesca	FvH4_1g26860 FvH4_1g26860
malus_domestica	MD09G1286000.v1.1 MD17G1278600.v1.1
prunus_persica	Prupe.3G007400_v2.0.a1
pyrus_communis	pycom09g19330 pycom17g27620 pycom17g27630
rosa_chinensis	RchiOBHm_Chr3g0487101
rosa_laevigata	RLG00000023033
rosa_multiflora	Rmu_co8377811.1_g000001 Rmu_ssc0000271.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395180
rosa_rugosa	Rorug03G0231000
rosa_samantha	Rh3AG279300 Rh3BG315300 Rh3CG313500 Rh3DG310300
rosa_wichuraiana	Rw3G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
AarI	CACCTGC	1 cut(s)	1531
Acc16I	TGCGCA	1 cut(s)	1439
Acc36I	ACCTGC	1 cut(s)	1531
AccB1I	GGYRCC	1 cut(s)	595
AciI	CCGC	5 cut(s)	538, 660, 672, 1684, 1801
AclWI	GGATC	8 cut(s)	179, 746, 749, 1022, 1035, 1139, 1355, 1632
AcoI	YGGCCR	1 cut(s)	1746
AcsI	RAATTY	3 cut(s)	402, 555, 1675
AcuI	CTGAAG	2 cut(s)	81, 290
AfaI	GTAC	7 cut(s)	13, 462, 927, 1230, 1474, 1599, 1658
AfiI	CCNNNNNNNGG	3 cut(s)	735, 1252, 1765
AjnI	CCWGG	6 cut(s)	379, 435, 484, 564, 757, 874
AluBI	AGCT	9 cut(s)	304, 623, 1114, 1268, 1286, 1432, 1465, 1526, 1789
AluI	AGCT	9 cut(s)	304, 623, 1114, 1268, 1286, 1432, 1465, 1526, 1789
Alw21I	GWGCWC	3 cut(s)	364, 841, 1060
Alw26I	GTCTC	3 cut(s)	51, 473, 1037
Alw44I	GTGCAC	2 cut(s)	360, 837
AlwI	GGATC	8 cut(s)	179, 746, 749, 1022, 1035, 1139, 1355, 1632
Ama87I	CYCGRG	1 cut(s)	1178
AoxI	GGCC	3 cut(s)	1247, 1746, 1767
ApaLI	GTGCAC	2 cut(s)	360, 837
ApeKI	GCWGC	6 cut(s)	32, 120, 443, 628, 647, 1268
ApoI	RAATTY	3 cut(s)	402, 555, 1675
AseI	ATTAAT	1 cut(s)	1049
Asp700I	GAANNNNTTC	1 cut(s)	908
AspA2I	CCTAGG	1 cut(s)	1250
AspLEI	GCGC	1 cut(s)	1440
AspS9I	GGNCC	2 cut(s)	581, 674
AsuHPI	GGTGA	4 cut(s)	581, 1130, 1654, 1718
AsuII	TTCGAA	1 cut(s)	451
AsuNHI	GCTAGC	1 cut(s)	1522
AvaI	CYCGRG	1 cut(s)	1178
AvaII	GGWCC	2 cut(s)	581, 674
AvrII	CCTAGG	1 cut(s)	1250
BaeGI	GKGCMC	3 cut(s)	364, 600, 841
BalI	TGGCCA	1 cut(s)	1748
BamHI	GGATCC	1 cut(s)	1027
BanI	GGYRCC	1 cut(s)	595
BauI	CACGAG	1 cut(s)	789
BbsI	GAAGAC	1 cut(s)	120
Bbv12I	GWGCWC	3 cut(s)	364, 841, 1060
BbvI	GCAGC	6 cut(s)	19, 132, 455, 634, 640, 1255
BccI	CCATC	7 cut(s)	61, 149, 728, 1091, 1298, 1372, 1618
BceAI	ACGGC	1 cut(s)	36
BciT130I	CCWGG	6 cut(s)	381, 437, 486, 566, 759, 876
BclI	TGATCA	1 cut(s)	571
BcoDI	GTCTC	3 cut(s)	51, 473, 1037
BfaI	CTAG	8 cut(s)	834, 992, 1142, 1251, 1287, 1433, 1523, 1715
BfmI	CTRYAG	4 cut(s)	118, 678, 1269, 1410
BfuAI	ACCTGC	1 cut(s)	1531
BisI	GCNGC	7 cut(s)	33, 121, 444, 538, 629, 648, 1269
BlnI	CCTAGG	1 cut(s)	1250
BlsI	GCNGC	7 cut(s)	34, 122, 445, 539, 630, 649, 1270
BmcAI	AGTACT	1 cut(s)	1474
Bme1390I	CCNGG	6 cut(s)	381, 437, 486, 566, 759, 876
Bme18I	GGWCC	2 cut(s)	581, 674
BmeT110I	CYCGRG	1 cut(s)	1178
BmgT120I	GGNCC	2 cut(s)	581, 674
BmiI	GGNNCC	4 cut(s)	378, 420, 597, 1029
BmrFI	CCNGG	6 cut(s)	381, 437, 486, 566, 759, 876
BmrI	ACTGGG	1 cut(s)	1753
BmsI	GCATC	3 cut(s)	520, 1152, 1615
BmtI	GCTAGC	1 cut(s)	1526
BmuI	ACTGGG	1 cut(s)	1753
BpiI	GAAGAC	1 cut(s)	120
BplI	GAGNNNNNCTC	2 cut(s)	1299, 1331
BpmI	CTGGAG	6 cut(s)	458, 468, 531, 603, 1023, 1445
Bpu14I	TTCGAA	1 cut(s)	451
BpuEI	CTTGAG	2 cut(s)	347, 1802
Bsa29I	ATCGAT	1 cut(s)	1302
BsaBI	GATNNNNATC	1 cut(s)	1308
BsaJI	CCNNGG	3 cut(s)	565, 1250, 1702
BsaXI	ACNNNNNCTCC	2 cut(s)	601, 631
Bsc4I	CCNNNNNNNGG	3 cut(s)	735, 1252, 1765
Bse1I	ACTGG	5 cut(s)	395, 514, 584, 1567, 1759
Bse3DI	GCAATG	2 cut(s)	42, 708
Bse8I	GATNNNNATC	1 cut(s)	1308
BseBI	CCWGG	6 cut(s)	381, 437, 486, 566, 759, 876
BseCI	ATCGAT	1 cut(s)	1302
BseDI	CCNNGG	3 cut(s)	565, 1250, 1702
BseGI	GGATG	4 cut(s)	76, 391, 1096, 1606
BseJI	GATNNNNATC	1 cut(s)	1308
BseLI	CCNNNNNNNGG	3 cut(s)	735, 1252, 1765
BseMI	GCAATG	2 cut(s)	42, 708
BseMII	CTCAG	9 cut(s)	324, 405, 414, 884, 891, 941, 944, 1163, 1274
BseNI	ACTGG	5 cut(s)	395, 514, 584, 1567, 1759
BseRI	GAGGAG	3 cut(s)	533, 642, 645
BseSI	GKGCMC	3 cut(s)	364, 600, 841
BseXI	GCAGC	6 cut(s)	19, 132, 455, 634, 640, 1255
BseYI	CCCAGC	3 cut(s)	15, 1114, 1526
BshFI	GGCC	3 cut(s)	1249, 1748, 1769
BshNI	GGYRCC	1 cut(s)	595
BshVI	ATCGAT	1 cut(s)	1302
BsiHKAI	GWGCWC	3 cut(s)	364, 841, 1060
BsiHKCI	CYCGRG	1 cut(s)	1178
BsiSI	CCGG	1 cut(s)	1246
BslFI	GGGAC	3 cut(s)	443, 1505, 1817
BslI	CCNNNNNNNGG	3 cut(s)	735, 1252, 1765
BsmAI	GTCTC	3 cut(s)	51, 473, 1037
BsmFI	GGGAC	3 cut(s)	443, 1505, 1817
BsmI	GAATGC	1 cut(s)	102
BsnI	GGCC	3 cut(s)	1249, 1748, 1769
BsoBI	CYCGRG	1 cut(s)	1178
Bsp119I	TTCGAA	1 cut(s)	451
Bsp1286I	GDGCHC	4 cut(s)	364, 600, 841, 1060
Bsp1407I	TGTACA	2 cut(s)	460, 1597
BspACI	CCGC	5 cut(s)	538, 660, 672, 1684, 1801
BspANI	GGCC	3 cut(s)	1249, 1748, 1769
BspCNI	CTCAG	9 cut(s)	325, 406, 415, 883, 892, 942, 943, 1162, 1273
BspDI	ATCGAT	1 cut(s)	1302
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	4 cut(s)	378, 420, 597, 1029
BspMAI	CTGCAG	4 cut(s)	122, 682, 1273, 1414
BspMI	ACCTGC	1 cut(s)	1531
BspOI	GCTAGC	1 cut(s)	1526
BspPI	GGATC	8 cut(s)	179, 746, 749, 1022, 1035, 1139, 1355, 1632
BspT104I	TTCGAA	1 cut(s)	451
BspT107I	GGYRCC	1 cut(s)	595
BsrDI	GCAATG	2 cut(s)	42, 708
BsrGI	TGTACA	2 cut(s)	460, 1597
BsrI	ACTGG	5 cut(s)	395, 514, 584, 1567, 1759
BssECI	CCNNGG	3 cut(s)	565, 1250, 1702
BssSI	CACGAG	1 cut(s)	789
BssT1I	CCWWGG	1 cut(s)	1250
Bst2BI	CACGAG	1 cut(s)	789
Bst2UI	CCWGG	6 cut(s)	381, 437, 486, 566, 759, 876
Bst4CI	ACNGT	8 cut(s)	136, 192, 206, 359, 457, 973, 1579, 1690
Bst6I	CTCTTC	3 cut(s)	57, 81, 510
BstAUI	TGTACA	2 cut(s)	460, 1597
BstBI	TTCGAA	1 cut(s)	451
BstC8I	GCNNGC	4 cut(s)	386, 535, 858, 1524
BstDSI	CCRYGG	1 cut(s)	1702
BstF5I	GGATG	4 cut(s)	76, 391, 1096, 1606
BstHHI	GCGC	1 cut(s)	1440
BstMAI	GTCTC	3 cut(s)	51, 473, 1037
BstMWI	GCNNNNNNNGC	3 cut(s)	1265, 1277, 1523
BstNI	CCWGG	6 cut(s)	381, 437, 486, 566, 759, 876
BstNSI	RCATGY	2 cut(s)	12, 537
BstSCI	CCNGG	6 cut(s)	379, 435, 484, 564, 757, 874
BstSFI	CTRYAG	4 cut(s)	118, 678, 1269, 1410
BstSLI	GKGCMC	3 cut(s)	364, 600, 841
BstV1I	GCAGC	6 cut(s)	19, 132, 455, 634, 640, 1255
BstV2I	GAAGAC	1 cut(s)	120
BstX2I	RGATCY	4 cut(s)	184, 1027, 1144, 1360
BstYI	RGATCY	4 cut(s)	184, 1027, 1144, 1360
Bsu15I	ATCGAT	1 cut(s)	1302
BsuRI	GGCC	3 cut(s)	1249, 1748, 1769
BsuTUI	ATCGAT	1 cut(s)	1302
BtgI	CCRYGG	1 cut(s)	1702
BtsCI	GGATG	4 cut(s)	76, 391, 1096, 1606
BtsI	GCAGTG	2 cut(s)	130, 1319
BveI	ACCTGC	1 cut(s)	1531
Cac8I	GCNNGC	4 cut(s)	386, 535, 858, 1524
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	1 cut(s)	1440
Cfr13I	GGNCC	2 cut(s)	581, 674
ClaI	ATCGAT	1 cut(s)	1302
CseI	GACGC	1 cut(s)	653
Csp6I	GTAC	7 cut(s)	12, 461, 926, 1229, 1473, 1598, 1657
CviAII	CATG	7 cut(s)	9, 178, 230, 534, 1219, 1337, 1537
CviQI	GTAC	7 cut(s)	12, 461, 926, 1229, 1473, 1598, 1657
EaeI	YGGCCR	1 cut(s)	1746
Eam1104I	CTCTTC	3 cut(s)	57, 81, 510
EarI	CTCTTC	3 cut(s)	57, 81, 510
Eco130I	CCWWGG	1 cut(s)	1250
Eco32I	GATATC	2 cut(s)	1699, 1723
Eco47I	GGWCC	2 cut(s)	581, 674
Eco57I	CTGAAG	2 cut(s)	81, 290
Eco88I	CYCGRG	1 cut(s)	1178
EcoRII	CCWGG	6 cut(s)	379, 435, 484, 564, 757, 874
EcoRV	GATATC	2 cut(s)	1699, 1723
EcoT14I	CCWWGG	1 cut(s)	1250
EcoT22I	ATGCAT	2 cut(s)	535, 1342
ErhI	CCWWGG	1 cut(s)	1250
FaeI	CATG	7 cut(s)	12, 181, 233, 537, 1222, 1340, 1540
FaqI	GGGAC	3 cut(s)	443, 1505, 1817
FatI	CATG	7 cut(s)	8, 177, 229, 533, 1218, 1336, 1536
FauI	CCCGC	2 cut(s)	667, 1794
FauNDI	CATATG	1 cut(s)	471
FbaI	TGATCA	1 cut(s)	571
Fnu4HI	GCNGC	7 cut(s)	33, 121, 444, 538, 629, 648, 1269
FokI	GGATG	4 cut(s)	83, 378, 1103, 1593
Fsp4HI	GCNGC	7 cut(s)	33, 121, 444, 538, 629, 648, 1269
FspAI	RTGCGCAY	1 cut(s)	1439
FspBI	CTAG	8 cut(s)	834, 992, 1142, 1251, 1287, 1433, 1523, 1715
FspI	TGCGCA	1 cut(s)	1439
GlaI	GCGC	1 cut(s)	1439
GluI	GCNGC	7 cut(s)	33, 121, 444, 538, 629, 648, 1269
GsaI	CCCAGC	3 cut(s)	19, 1118, 1530
GsuI	CTGGAG	6 cut(s)	458, 468, 531, 603, 1023, 1445
HaeIII	GGCC	3 cut(s)	1249, 1748, 1769
HapII	CCGG	1 cut(s)	1246
HgaI	GACGC	1 cut(s)	653
HhaI	GCGC	1 cut(s)	1440
Hin1II	CATG	7 cut(s)	12, 181, 233, 537, 1222, 1340, 1540
Hin6I	GCGC	1 cut(s)	1438
HinP1I	GCGC	1 cut(s)	1438
HincII	GTYRAC	1 cut(s)	702
HindII	GTYRAC	1 cut(s)	702
HindIII	AAGCTT	1 cut(s)	1787
HinfI	GANTC	4 cut(s)	466, 481, 803, 1486
HpaII	CCGG	1 cut(s)	1246
HphI	GGTGA	4 cut(s)	581, 1130, 1654, 1718
Hpy166II	GTNNAC	3 cut(s)	362, 702, 839
Hpy188III	TCNNGA	8 cut(s)	218, 230, 941, 1040, 1142, 1490, 1553, 1781
Hpy8I	GTNNAC	3 cut(s)	362, 702, 839
HpyAV	CCTTC	5 cut(s)	265, 367, 662, 678, 1576
HpyCH4III	ACNGT	8 cut(s)	136, 192, 206, 359, 457, 973, 1579, 1690
HpyCH4IV	ACGT	1 cut(s)	1659
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1265, 1277, 1523
HpySE526I	ACGT	1 cut(s)	1659
Hsp92II	CATG	7 cut(s)	12, 181, 233, 537, 1222, 1340, 1540
HspAI	GCGC	1 cut(s)	1438
Ksp22I	TGATCA	1 cut(s)	571
LmnI	GCTCC	2 cut(s)	655, 1042
Lsp1109I	GCAGC	6 cut(s)	19, 132, 455, 634, 640, 1255
LweI	GCATC	3 cut(s)	520, 1152, 1615
MaeI	CTAG	8 cut(s)	834, 992, 1142, 1251, 1287, 1433, 1523, 1715
MaeII	ACGT	1 cut(s)	1659
MaeIII	GTNAC	5 cut(s)	73, 95, 1100, 1565, 1690
MboII	GAAGA	8 cut(s)	74, 98, 125, 527, 539, 876, 997, 1370
MfeI	CAATTG	1 cut(s)	1234
MflI	RGATCY	4 cut(s)	184, 1027, 1144, 1360
MhlI	GDGCHC	4 cut(s)	364, 600, 841, 1060
MlsI	TGGCCA	1 cut(s)	1748
MluCI	AATT	9 cut(s)	213, 402, 447, 555, 690, 1072, 1234, 1615, 1675
MluNI	TGGCCA	1 cut(s)	1748
MlyI	GAGTC	2 cut(s)	475, 1495
Mox20I	TGGCCA	1 cut(s)	1748
Mph1103I	ATGCAT	2 cut(s)	535, 1342
MroXI	GAANNNNTTC	1 cut(s)	908
MscI	TGGCCA	1 cut(s)	1748
MseI	TTAA	7 cut(s)	167, 506, 1049, 1185, 1455, 1482, 1664
MslI	CAYNNNNRTG	5 cut(s)	474, 1302, 1369, 1541, 1737
Msp20I	TGGCCA	1 cut(s)	1748
MspI	CCGG	1 cut(s)	1246
MspR9I	CCNGG	6 cut(s)	381, 437, 486, 566, 759, 876
MunI	CAATTG	1 cut(s)	1234
Mva1269I	GAATGC	1 cut(s)	102
MvaI	CCWGG	6 cut(s)	381, 437, 486, 566, 759, 876
MwoI	GCNNNNNNNGC	3 cut(s)	1265, 1277, 1523
NdeI	CATATG	1 cut(s)	471
NheI	GCTAGC	1 cut(s)	1522
NlaIII	CATG	7 cut(s)	12, 181, 233, 537, 1222, 1340, 1540
NlaIV	GGNNCC	4 cut(s)	378, 420, 597, 1029
NmuCI	GTSAC	2 cut(s)	1565, 1690
NsbI	TGCGCA	1 cut(s)	1439
NsiI	ATGCAT	2 cut(s)	535, 1342
NspI	RCATGY	2 cut(s)	12, 537
NspV	TTCGAA	1 cut(s)	451
PaeI	GCATGC	1 cut(s)	537
PagI	TCATGA	1 cut(s)	229
PaqCI	CACCTGC	1 cut(s)	1531
PctI	GAATGC	1 cut(s)	102
PdmI	GAANNNNTTC	1 cut(s)	908
PfeI	GAWTC	2 cut(s)	466, 803
PfoI	TCCNGGA	1 cut(s)	484
PkrI	GCNGC	7 cut(s)	34, 122, 445, 539, 630, 649, 1270
PleI	GAGTC	2 cut(s)	475, 1494
PpsI	GAGTC	2 cut(s)	475, 1494
PshBI	ATTAAT	1 cut(s)	1049
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	6 cut(s)	379, 435, 484, 564, 757, 874
PspFI	CCCAGC	3 cut(s)	15, 1114, 1526
PspGI	CCWGG	6 cut(s)	379, 435, 484, 564, 757, 874
PspN4I	GGNNCC	4 cut(s)	378, 420, 597, 1029
PspPI	GGNCC	2 cut(s)	581, 674
PstI	CTGCAG	4 cut(s)	122, 682, 1273, 1414
PsuI	RGATCY	4 cut(s)	184, 1027, 1144, 1360
RsaI	GTAC	7 cut(s)	13, 462, 927, 1230, 1474, 1599, 1658
RsaNI	GTAC	7 cut(s)	12, 461, 926, 1229, 1473, 1598, 1657
RseI	CAYNNNNRTG	5 cut(s)	474, 1302, 1369, 1541, 1737
SaqAI	TTAA	7 cut(s)	167, 506, 1049, 1185, 1455, 1482, 1664
SatI	GCNGC	7 cut(s)	33, 121, 444, 538, 629, 648, 1269
Sau96I	GGNCC	2 cut(s)	581, 674
SbfI	CCTGCAGG	1 cut(s)	682
ScaI	AGTACT	1 cut(s)	1474
SchI	GAGTC	2 cut(s)	475, 1495
ScrFI	CCNGG	6 cut(s)	381, 437, 486, 566, 759, 876
SdaI	CCTGCAGG	1 cut(s)	682
SduI	GDGCHC	4 cut(s)	364, 600, 841, 1060
SfaNI	GCATC	3 cut(s)	520, 1152, 1615
SfcI	CTRYAG	4 cut(s)	118, 678, 1269, 1410
SfuI	TTCGAA	1 cut(s)	451
SinI	GGWCC	2 cut(s)	581, 674
SmiMI	CAYNNNNRTG	5 cut(s)	474, 1302, 1369, 1541, 1737
SmlI	CTYRAG	2 cut(s)	326, 1781
SmoI	CTYRAG	2 cut(s)	326, 1781
SphI	GCATGC	1 cut(s)	537
Sse8387I	CCTGCAGG	1 cut(s)	682
Sse9I	AATT	9 cut(s)	213, 402, 447, 555, 690, 1072, 1234, 1615, 1675
SsiI	CCGC	5 cut(s)	538, 660, 672, 1684, 1801
SspI	AATATT	1 cut(s)	639
SspMI	CTAG	8 cut(s)	834, 992, 1142, 1251, 1287, 1433, 1523, 1715
StyD4I	CCNGG	6 cut(s)	379, 435, 484, 564, 757, 874
StyI	CCWWGG	1 cut(s)	1250
TaaI	ACNGT	8 cut(s)	136, 192, 206, 359, 457, 973, 1579, 1690
TaiI	ACGT	1 cut(s)	1662
TaqI	TCGA	4 cut(s)	451, 1062, 1208, 1302
TasI	AATT	9 cut(s)	213, 402, 447, 555, 690, 1072, 1234, 1615, 1675
TatI	WGTACW	3 cut(s)	460, 1472, 1597
TauI	GCSGC	1 cut(s)	540
TfiI	GAWTC	2 cut(s)	466, 803
Tru1I	TTAA	7 cut(s)	167, 506, 1049, 1185, 1455, 1482, 1664
Tru9I	TTAA	7 cut(s)	167, 506, 1049, 1185, 1455, 1482, 1664
TseFI	GTSAC	2 cut(s)	1565, 1690
TseI	GCWGC	6 cut(s)	32, 120, 443, 628, 647, 1268
Tsp45I	GTSAC	2 cut(s)	1565, 1690
TspDTI	ATGAA	8 cut(s)	314, 380, 386, 458, 1001, 1290, 1371, 1525
TspGWI	ACGGA	1 cut(s)	1691
VneI	GTGCAC	2 cut(s)	360, 837
VpaK11BI	GGWCC	2 cut(s)	581, 674
VspI	ATTAAT	1 cut(s)	1049
XapI	RAATTY	3 cut(s)	402, 555, 1675
XbaI	TCTAGA	1 cut(s)	1141
XceI	RCATGY	2 cut(s)	12, 537
XmaJI	CCTAGG	1 cut(s)	1250
XmnI	GAANNNNTTC	1 cut(s)	908
XspI	CTAG	8 cut(s)	834, 992, 1142, 1251, 1287, 1433, 1523, 1715
ZrmI	AGTACT	1 cut(s)	1474
Zsp2I	ATGCAT	2 cut(s)	535, 1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.