Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000296.1

Orthogroup ID

OG0009881

Physical Location & Seq

Genomic Coordinates Forward (+)

4578 .. 8762

Gene Structure 4185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

atggcctcgtcgaccacctctttcgctgcttccggcgtcggccttcgtcttccccagtctgtttccaccaagtgttgcagtaaagcttctctctttcctcacccaactctctccctcaccttccacgccagaccccaattcttccggggactagcgtcccggcaattcaacccgaacggtgcgtttgggaccgggtcgggccgactgggccgggctccgaacccgtttgttgtgcgctccgaggcttcttcaaccggaaggggacagattacacagcaggaattcactgaaatggcgtggcaggcggtggtttcgtcgccggaagtggccaaggagaacaagcatcagatagtggagactgagcatttgatgaaggcattgcttgagcagaagaatgggcttgctcgtcggattttcgctaaggctggggtagataatagtaggcttcttgaggccactgataagtatattcagcgccaacctaaggttcttggtgactctgcgggatcgatgttaggacgtgatttggaagccttgcttcagagagccagggattacaagaaggaatatggggactcgtttgtgtctgtggagcatttggttcttggtttcattcaagatcaacgatttgggaagcaaatatttaaggattttcaaatctccaagcagtctttgaagtcggctatagaatccataaggggacggcaatcagttattgaccaagatcctgaggggaaatatgagtcccttgaaaagtatggaaaagatctgacagccatggcaaaagaaggaaagcttgacccggtaataggaagagatgatgaaatacgcaggtgcatccagattctctcaagaagaacaaagaataacccagtgctgattggtgaaccaggcgttgggaaaactgcgatttcagaagggcttgctcagcgaattgtgcaaggggatgtcccacaagctttaatgaatcgtaagctaatatctcttgacatgggtgcactaattgctggagcaaaatatcggggagagtttgaggataggctgaaggctgtactcaaggaagtaacagaatcagagggccagattgtcctttttattgatgagatccacacagttgtcggggcaggtgctacaaatggtgcaatggatgctggcaatcttttaaaacccatgcttggtcggggagagttgcggtgtataggtgcaacaacactggatgaatatcgcaaatatattgagaaagatccagcattggagcgtcgttttcagcaagtttatgttgatcaacctactgttgaggatacaatttcgatactccggggattgcgtgaaagatatgagttgcatcacggggtccgcatttctgatggtgcacttgtggaagctgcaattctctcagaccgttacatcagtgggagatttttacctgacaaagctattgacttagttgatgaagctgctgctaaattgaaaatggaaattacatcaaagcccacagccctagatgagatcaatcgttcagtattgaaacttgaaatggaaagactgtcacttacaaatgacaccgacaaagcgtccaaagagagattgaaccgccttgaggcagagttgtccatcttaaaagagaaacaatctcagctctctgagcagtgggaacatgagaagtctgtcatgactcgcattcagtcaatcaaggaagaggtaggcaccttgaagttctgttctttatactgttatgattttctgtttcagcttgtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

586

Amino Acids

65.35

Weight (kDa)

8.49

Isoelectric Point (pI)

31.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Clp_N	PF02861	94 - 217	1e-35	Clp repeat (R) N-terminal domain
NBD_SMAX1	PF23569	274 - 375	4.1e-06	SMAX1 nucleotide binding domain
AAA	PF00004	292 - 423	9e-13	ATPase family associated with various cellular activities (AAA)
AAA_lid_9	PF17871	431 - 533	3.4e-34	AAA lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15450
fragaria_vesca	FvH4_6g47410 FvH4_6g47410 FvH4_6g47410
malus_domestica	MD00G1172100.v1.1 MD09G1061700.v1.1
prunus_persica	Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1
pyrus_communis	pycom111g05200 pycom17g05590
rosa_chinensis	RchiOBHm_Chr2g0166481
rosa_laevigata	RLG00000021622
rosa_multiflora	Rmu_ssc0000296.1_g000002
rosa_roxburghii	Rroxscaffold_2G00084860
rosa_rugosa	Rorug02G0523200
rosa_samantha	Rh2AG589400 Rh2BG601600 Rh2CG572200 Rh2DG612100
rosa_wichuraiana	Rw2G049120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	822, 1115
Acc36I	ACCTGC	2 cut(s)	822, 1115
AccB1I	GGYRCC	1 cut(s)	1706
AccB7I	CCANNNNNTGG	1 cut(s)	896
AccI	GTMKAC	1 cut(s)	11
AciI	CCGC	5 cut(s)	305, 503, 1192, 1357, 1594
AclWI	GGATC	4 cut(s)	514, 719, 1099, 1238
AcoI	YGGCCR	1 cut(s)	327
AcsI	RAATTY	1 cut(s)	281
AcuI	CTGAAG	2 cut(s)	524, 1064
AcyI	GRCGYC	1 cut(s)	36
AdeI	CACNNNGTG	1 cut(s)	72
AfaI	GTAC	1 cut(s)	1053
AfiI	CCNNNNNNNGG	5 cut(s)	484, 809, 896, 1175, 1600
AhdI	GACNNNNNGTC	1 cut(s)	1573
AjiI	CACGTC	1 cut(s)	521
AjnI	CCWGG	2 cut(s)	548, 889
AjuI	GAANNNNNNNTTGG	4 cut(s)	471, 503, 879, 911
AluBI	AGCT	9 cut(s)	86, 796, 959, 976, 1385, 1436, 1457, 1639, 1753
AluI	AGCT	9 cut(s)	86, 796, 959, 976, 1385, 1436, 1457, 1639, 1753
Alw21I	GWGCWC	2 cut(s)	1000, 1375
Alw26I	GTCTC	1 cut(s)	350
Alw44I	GTGCAC	2 cut(s)	996, 1371
AlwI	GGATC	4 cut(s)	514, 719, 1099, 1238
AoxI	GGCC	7 cut(s)	3, 40, 199, 208, 327, 453, 1078
ApaLI	GTGCAC	2 cut(s)	996, 1371
ApeKI	GCWGC	4 cut(s)	26, 1385, 1457, 1460
ApoI	RAATTY	1 cut(s)	281
ArsI	GACNNNNNNTTYG	2 cut(s)	349, 381
AspLEI	GCGC	2 cut(s)	237, 477
AspS9I	GGNCC	5 cut(s)	189, 199, 208, 1078, 1354
AsuC2I	CCSGG	6 cut(s)	146, 160, 193, 212, 803, 1319
AsuHPI	GGTGA	4 cut(s)	92, 109, 506, 896
AvaII	GGWCC	2 cut(s)	189, 1354
AxyI	CCTNAGG	2 cut(s)	483, 729
BaeGI	GKGCMC	2 cut(s)	1000, 1375
BalI	TGGCCA	1 cut(s)	329
BanI	GGYRCC	1 cut(s)	1706
BanII	GRGCYC	1 cut(s)	217
BbsI	GAAGAC	1 cut(s)	41
Bbv12I	GWGCWC	2 cut(s)	1000, 1375
BbvI	GCAGC	4 cut(s)	13, 1372, 1444, 1447
BccI	CCATC	2 cut(s)	1361, 1622
BceAI	ACGGC	1 cut(s)	719
BciT130I	CCWGG	2 cut(s)	550, 891
BciVI	GTATCC	1 cut(s)	1294
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	6 cut(s)	146, 160, 193, 212, 803, 1319
BcoDI	GTCTC	1 cut(s)	350
BfaI	CTAG	2 cut(s)	152, 1502
BfmI	CTRYAG	1 cut(s)	684
BfoI	RGCGCY	1 cut(s)	478
BfuAI	ACCTGC	2 cut(s)	822, 1115
BfuI	GTATCC	1 cut(s)	1294
BglI	GCCNNNNNGGC	1 cut(s)	207
BglII	AGATCT	1 cut(s)	766
BisI	GCNGC	4 cut(s)	27, 1386, 1458, 1461
BlpI	GCTNAGC	1 cut(s)	927
BlsI	GCNGC	4 cut(s)	28, 1387, 1459, 1462
Bme1390I	CCNGG	8 cut(s)	146, 160, 193, 212, 550, 803, 891, 1319
Bme18I	GGWCC	2 cut(s)	189, 1354
BmeRI	GACNNNNNGTC	1 cut(s)	1573
BmgBI	CACGTC	1 cut(s)	521
BmgT120I	GGNCC	5 cut(s)	189, 199, 208, 1078, 1354
BmiI	GGNNCC	4 cut(s)	190, 216, 1355, 1708
BmrFI	CCNGG	8 cut(s)	146, 160, 193, 212, 550, 803, 891, 1319
BmrI	ACTGGG	3 cut(s)	49, 215, 866
BmsI	GCATC	4 cut(s)	352, 846, 1138, 1354
BmuI	ACTGGG	3 cut(s)	49, 215, 866
BoxI	GACNNNNGTC	1 cut(s)	154
BpiI	GAAGAC	1 cut(s)	41
BpmI	CTGGAG	1 cut(s)	1029
Bpu10I	CCTNAGC	1 cut(s)	420
Bpu1102I	GCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	5 cut(s)	404, 470, 835, 1040, 1619
BpuMI	CCSGG	6 cut(s)	146, 160, 193, 212, 803, 1319
Bsa29I	ATCGAT	1 cut(s)	509
BsaBI	GATNNNNATC	1 cut(s)	1221
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	6 cut(s)	145, 240, 330, 549, 777, 1318
BsaWI	WCCGGW	1 cut(s)	254
Bsc4I	CCNNNNNNNGG	5 cut(s)	484, 809, 896, 1175, 1600
Bse1I	ACTGG	4 cut(s)	55, 210, 872, 1218
Bse21I	CCTNAGG	2 cut(s)	483, 729
Bse3DI	GCAATG	2 cut(s)	377, 1149
Bse8I	GATNNNNATC	1 cut(s)	1221
BseBI	CCWGG	2 cut(s)	550, 891
BseCI	ATCGAT	1 cut(s)	509
BseDI	CCNNGG	6 cut(s)	145, 240, 330, 549, 777, 1318
BseGI	GGATG	4 cut(s)	837, 952, 1153, 1222
BseJI	GATNNNNATC	1 cut(s)	1221
BseLI	CCNNNNNNNGG	5 cut(s)	484, 809, 896, 1175, 1600
BseMI	GCAATG	2 cut(s)	377, 1149
BseMII	CTCAG	6 cut(s)	351, 720, 941, 1410, 1635, 1649
BseNI	ACTGG	4 cut(s)	55, 210, 872, 1218
BseSI	GKGCMC	2 cut(s)	1000, 1375
BseXI	GCAGC	4 cut(s)	13, 1372, 1444, 1447
BseYI	CCCAGC	1 cut(s)	425
BshFI	GGCC	7 cut(s)	5, 42, 201, 210, 329, 455, 1080
BshNI	GGYRCC	1 cut(s)	1706
BshVI	ATCGAT	1 cut(s)	509
BsiHKAI	GWGCWC	2 cut(s)	1000, 1375
BsiSI	CCGG	9 cut(s)	33, 145, 160, 192, 211, 255, 320, 803, 1318
BslFI	GGGAC	8 cut(s)	142, 162, 202, 276, 587, 714, 730, 935
BslI	CCNNNNNNNGG	5 cut(s)	484, 809, 896, 1175, 1600
BsmAI	GTCTC	1 cut(s)	350
BsmFI	GGGAC	8 cut(s)	142, 162, 202, 276, 587, 714, 730, 935
BsmI	GAATGC	1 cut(s)	1680
BsnI	GGCC	7 cut(s)	5, 42, 201, 210, 329, 455, 1080
Bsp1286I	GDGCHC	3 cut(s)	217, 1000, 1375
Bsp143I	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
Bsp1720I	GCTNAGC	1 cut(s)	927
Bsp19I	CCATGG	1 cut(s)	777
BspACI	CCGC	5 cut(s)	305, 503, 1192, 1357, 1594
BspANI	GGCC	7 cut(s)	5, 42, 201, 210, 329, 455, 1080
BspCNI	CTCAG	6 cut(s)	352, 721, 940, 1409, 1636, 1648
BspDI	ATCGAT	1 cut(s)	509
BspHI	TCATGA	1 cut(s)	1671
BspLI	GGNNCC	4 cut(s)	190, 216, 1355, 1708
BspMI	ACCTGC	2 cut(s)	822, 1115
BspPI	GGATC	4 cut(s)	514, 719, 1099, 1238
BspT107I	GGYRCC	1 cut(s)	1706
BsrDI	GCAATG	2 cut(s)	377, 1149
BsrI	ACTGG	4 cut(s)	55, 210, 872, 1218
BssECI	CCNNGG	6 cut(s)	145, 240, 330, 549, 777, 1318
BssMI	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	2 cut(s)	330, 777
Bst2UI	CCWGG	2 cut(s)	550, 891
Bst4CI	ACNGT	6 cut(s)	179, 1114, 1294, 1403, 1548, 1733
Bst6I	CTCTTC	2 cut(s)	808, 1692
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	2 cut(s)	1004, 1148
BstC8I	GCNNGC	4 cut(s)	303, 402, 924, 1153
BstDEI	CTNAG	9 cut(s)	360, 420, 483, 729, 927, 1396, 1444, 1635, 1644
BstDSI	CCRYGG	1 cut(s)	777
BstF5I	GGATG	4 cut(s)	837, 952, 1153, 1222
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	2 cut(s)	237, 477
BstKTI	GATC	8 cut(s)	509, 622, 727, 769, 1107, 1246, 1285, 1512
BstMAI	GTCTC	1 cut(s)	350
BstMBI	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
BstMWI	GCNNNNNNNGC	7 cut(s)	207, 302, 928, 937, 1004, 1148, 1645
BstNI	CCWGG	2 cut(s)	550, 891
BstPAI	GACNNNNGTC	1 cut(s)	154
BstSCI	CCNGG	8 cut(s)	144, 158, 191, 210, 548, 801, 889, 1317
BstSFI	CTRYAG	1 cut(s)	684
BstSLI	GKGCMC	2 cut(s)	1000, 1375
BstV1I	GCAGC	4 cut(s)	13, 1372, 1444, 1447
BstV2I	GAAGAC	1 cut(s)	41
BstX2I	RGATCY	4 cut(s)	724, 766, 1104, 1243
BstYI	RGATCY	4 cut(s)	724, 766, 1104, 1243
Bsu15I	ATCGAT	1 cut(s)	509
Bsu36I	CCTNAGG	2 cut(s)	483, 729
BsuI	GTATCC	1 cut(s)	1294
BsuRI	GGCC	7 cut(s)	5, 42, 201, 210, 329, 455, 1080
BsuTUI	ATCGAT	1 cut(s)	509
BtgI	CCRYGG	1 cut(s)	777
BtrI	CACGTC	1 cut(s)	521
BtsCI	GGATG	4 cut(s)	837, 952, 1153, 1222
BtsI	GCAGTG	1 cut(s)	1655
BtsIMutI	CAGTG	6 cut(s)	285, 456, 879, 1211, 1417, 1655
BveI	ACCTGC	2 cut(s)	822, 1115
Cac8I	GCNNGC	4 cut(s)	303, 402, 924, 1153
CciI	TCATGA	1 cut(s)	1671
CfoI	GCGC	2 cut(s)	237, 477
Cfr13I	GGNCC	5 cut(s)	189, 199, 208, 1078, 1354
ClaI	ATCGAT	1 cut(s)	509
CseI	GACGC	4 cut(s)	25, 144, 1247, 1563
Csp6I	GTAC	1 cut(s)	1052
CviAII	CATG	5 cut(s)	778, 991, 1171, 1658, 1672
CviQI	GTAC	1 cut(s)	1052
DdeI	CTNAG	9 cut(s)	360, 420, 483, 729, 927, 1396, 1444, 1635, 1644
DpnI	GATC	8 cut(s)	508, 621, 726, 768, 1106, 1245, 1284, 1511
DpnII	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
DraI	TTTAAA	1 cut(s)	1164
DraIII	CACNNNGTG	1 cut(s)	72
DriI	GACNNNNNGTC	1 cut(s)	1573
EaeI	YGGCCR	1 cut(s)	327
Eam1104I	CTCTTC	2 cut(s)	808, 1692
Eam1105I	GACNNNNNGTC	1 cut(s)	1573
EarI	CTCTTC	2 cut(s)	808, 1692
Eco130I	CCWWGG	2 cut(s)	330, 777
Eco24I	GRGCYC	1 cut(s)	217
Eco47I	GGWCC	2 cut(s)	189, 1354
Eco57I	CTGAAG	2 cut(s)	524, 1064
Eco81I	CCTNAGG	2 cut(s)	483, 729
EcoRI	GAATTC	1 cut(s)	281
EcoRII	CCWGG	2 cut(s)	548, 889
EcoT14I	CCWWGG	2 cut(s)	330, 777
EcoT38I	GRGCYC	1 cut(s)	217
ErhI	CCWWGG	2 cut(s)	330, 777
FaeI	CATG	5 cut(s)	781, 994, 1174, 1661, 1675
FalI	AAGNNNNNCTT	4 cut(s)	522, 554, 780, 812
FaqI	GGGAC	8 cut(s)	142, 162, 202, 276, 587, 714, 730, 935
FatI	CATG	5 cut(s)	777, 990, 1170, 1657, 1671
FauI	CCCGC	1 cut(s)	496
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	1 cut(s)	11
Fnu4HI	GCNGC	4 cut(s)	27, 1386, 1458, 1461
FokI	GGATG	4 cut(s)	824, 959, 1160, 1229
FriOI	GRGCYC	1 cut(s)	217
Fsp4HI	GCNGC	4 cut(s)	27, 1386, 1458, 1461
FspBI	CTAG	2 cut(s)	152, 1502
GlaI	GCGC	2 cut(s)	236, 476
GluI	GCNGC	4 cut(s)	27, 1386, 1458, 1461
GsaI	CCCAGC	1 cut(s)	429
GsuI	CTGGAG	1 cut(s)	1029
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	7 cut(s)	5, 42, 201, 210, 329, 455, 1080
HapII	CCGG	9 cut(s)	33, 145, 160, 192, 211, 255, 320, 803, 1318
HgaI	GACGC	4 cut(s)	25, 144, 1247, 1563
HhaI	GCGC	2 cut(s)	237, 477
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	5 cut(s)	781, 994, 1174, 1661, 1675
Hin6I	GCGC	2 cut(s)	235, 475
HinP1I	GCGC	2 cut(s)	235, 475
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	3 cut(s)	84, 794, 957
HinfI	GANTC	8 cut(s)	497, 575, 689, 743, 844, 967, 1070, 1675
HpaII	CCGG	9 cut(s)	33, 145, 160, 192, 211, 255, 320, 803, 1318
HphI	GGTGA	4 cut(s)	92, 109, 506, 896
Hpy166II	GTNNAC	4 cut(s)	12, 887, 998, 1373
Hpy188III	TCNNGA	7 cut(s)	449, 617, 728, 841, 852, 986, 1672
Hpy8I	GTNNAC	4 cut(s)	12, 887, 998, 1373
Hpy99I	CGWCG	5 cut(s)	13, 41, 319, 411, 1263
HpyAV	CCTTC	8 cut(s)	53, 130, 252, 367, 556, 782, 911, 1039
HpyCH4III	ACNGT	6 cut(s)	179, 1114, 1294, 1403, 1548, 1733
HpyCH4IV	ACGT	1 cut(s)	520
HpyCH4V	TGCA	9 cut(s)	78, 837, 940, 998, 1142, 1205, 1345, 1373, 1388
HpyF10VI	GCNNNNNNNGC	7 cut(s)	207, 302, 928, 937, 1004, 1148, 1645
HpyF3I	CTNAG	9 cut(s)	360, 420, 483, 729, 927, 1396, 1444, 1635, 1644
HpySE526I	ACGT	1 cut(s)	520
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	5 cut(s)	781, 994, 1174, 1661, 1675
HspAI	GCGC	2 cut(s)	235, 475
Ksp22I	TGATCA	1 cut(s)	1282
Kzo9I	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
LmnI	GCTCC	5 cut(s)	220, 242, 592, 1010, 1255
Lsp1109I	GCAGC	4 cut(s)	13, 1372, 1444, 1447
LweI	GCATC	4 cut(s)	352, 846, 1138, 1354
MaeI	CTAG	2 cut(s)	152, 1502
MaeII	ACGT	1 cut(s)	520
MaeIII	GTNAC	4 cut(s)	494, 1063, 1403, 1548
MalI	GATC	8 cut(s)	508, 621, 726, 768, 1106, 1245, 1284, 1511
MboI	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
MboII	GAAGA	7 cut(s)	41, 133, 240, 403, 825, 867, 1709
MflI	RGATCY	4 cut(s)	724, 766, 1104, 1243
MhlI	GDGCHC	3 cut(s)	217, 1000, 1375
MlsI	TGGCCA	1 cut(s)	329
MluCI	AATT	9 cut(s)	137, 164, 281, 933, 1002, 1305, 1389, 1466, 1479
MluNI	TGGCCA	1 cut(s)	329
MlyI	GAGTC	4 cut(s)	491, 569, 752, 1669
MmeI	TCCRAC	1 cut(s)	389
Mox20I	TGGCCA	1 cut(s)	329
MscI	TGGCCA	1 cut(s)	329
MseI	TTAA	4 cut(s)	645, 962, 1163, 1619
MslI	CAYNNNNRTG	1 cut(s)	290
Msp20I	TGGCCA	1 cut(s)	329
MspI	CCGG	9 cut(s)	33, 145, 160, 192, 211, 255, 320, 803, 1318
MspR9I	CCNGG	8 cut(s)	146, 160, 193, 212, 550, 803, 891, 1319
Mva1269I	GAATGC	1 cut(s)	1680
MvaI	CCWGG	2 cut(s)	550, 891
MwoI	GCNNNNNNNGC	7 cut(s)	207, 302, 928, 937, 1004, 1148, 1645
NciI	CCSGG	6 cut(s)	146, 160, 193, 212, 803, 1319
NcoI	CCATGG	1 cut(s)	777
NdeII	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
NlaIII	CATG	5 cut(s)	781, 994, 1174, 1661, 1675
NlaIV	GGNNCC	4 cut(s)	190, 216, 1355, 1708
NmuCI	GTSAC	2 cut(s)	494, 1548
PagI	TCATGA	1 cut(s)	1671
PaqCI	CACCTGC	2 cut(s)	822, 1115
PctI	GAATGC	1 cut(s)	1680
PfeI	GAWTC	4 cut(s)	689, 844, 967, 1070
PflFI	GACNNNGTC	1 cut(s)	193
PflMI	CCANNNNNTGG	1 cut(s)	896
PkrI	GCNGC	4 cut(s)	28, 1387, 1459, 1462
PleI	GAGTC	4 cut(s)	491, 569, 751, 1669
PpsI	GAGTC	4 cut(s)	491, 569, 751, 1669
PshAI	GACNNNNGTC	1 cut(s)	154
Psp6I	CCWGG	2 cut(s)	548, 889
PspFI	CCCAGC	1 cut(s)	425
PspGI	CCWGG	2 cut(s)	548, 889
PspN4I	GGNNCC	4 cut(s)	190, 216, 1355, 1708
PspPI	GGNCC	5 cut(s)	189, 199, 208, 1078, 1354
PsuI	RGATCY	4 cut(s)	724, 766, 1104, 1243
PsyI	GACNNNGTC	1 cut(s)	193
RsaI	GTAC	1 cut(s)	1053
RsaNI	GTAC	1 cut(s)	1052
RseI	CAYNNNNRTG	1 cut(s)	290
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	4 cut(s)	645, 962, 1163, 1619
SatI	GCNGC	4 cut(s)	27, 1386, 1458, 1461
Sau3AI	GATC	8 cut(s)	506, 619, 724, 766, 1104, 1243, 1282, 1509
Sau96I	GGNCC	5 cut(s)	189, 199, 208, 1078, 1354
SchI	GAGTC	4 cut(s)	491, 569, 752, 1669
ScrFI	CCNGG	8 cut(s)	146, 160, 193, 212, 550, 803, 891, 1319
SduI	GDGCHC	3 cut(s)	217, 1000, 1375
SfaNI	GCATC	4 cut(s)	352, 846, 1138, 1354
SfcI	CTRYAG	1 cut(s)	684
SfiI	GGCCNNNNNGGCC	1 cut(s)	207
SinI	GGWCC	2 cut(s)	189, 1354
SmiMI	CAYNNNNRTG	1 cut(s)	290
SmlI	CTYRAG	5 cut(s)	383, 449, 850, 1055, 1598
SmoI	CTYRAG	5 cut(s)	383, 449, 850, 1055, 1598
Sse9I	AATT	9 cut(s)	137, 164, 281, 933, 1002, 1305, 1389, 1466, 1479
SsiI	CCGC	5 cut(s)	305, 503, 1192, 1357, 1594
SspI	AATATT	1 cut(s)	642
SspMI	CTAG	2 cut(s)	152, 1502
StyD4I	CCNGG	8 cut(s)	144, 158, 191, 210, 548, 801, 889, 1317
StyI	CCWWGG	2 cut(s)	330, 777
TaaI	ACNGT	6 cut(s)	179, 1114, 1294, 1403, 1548, 1733
TaiI	ACGT	1 cut(s)	523
TaqI	TCGA	3 cut(s)	11, 509, 1310
TasI	AATT	9 cut(s)	137, 164, 281, 933, 1002, 1305, 1389, 1466, 1479
TatI	WGTACW	1 cut(s)	1051
TfiI	GAWTC	4 cut(s)	689, 844, 967, 1070
Tru1I	TTAA	4 cut(s)	645, 962, 1163, 1619
Tru9I	TTAA	4 cut(s)	645, 962, 1163, 1619
TscAI	CASTG	6 cut(s)	292, 463, 879, 1218, 1417, 1655
TseFI	GTSAC	2 cut(s)	494, 1548
TseI	GCWGC	4 cut(s)	26, 1385, 1457, 1460
Tsp45I	GTSAC	2 cut(s)	494, 1548
TspDTI	ATGAA	6 cut(s)	386, 601, 837, 980, 1233, 1467
TspRI	CASTG	6 cut(s)	292, 463, 879, 1218, 1417, 1655
Tth111I	GACNNNGTC	1 cut(s)	193
Van91I	CCANNNNNTGG	1 cut(s)	896
VneI	GTGCAC	2 cut(s)	996, 1371
VpaK11BI	GGWCC	2 cut(s)	189, 1354
XapI	RAATTY	1 cut(s)	281
XmiI	GTMKAC	1 cut(s)	11
XspI	CTAG	2 cut(s)	152, 1502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.