Rmu_ssc0000381.1_g000028

Multiple myeloma tumor-associated protein 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000381.1
OG0007359
Physical Location & Seq
Reverse (-)
129910 .. 132578
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 651 bp
atgtatcatcctactagaggtggagttcgtggtggtcgagatcagtttagttgggacgatgttaaggtcgacaagcatcgtgagaattatcttggtcacagtatcaaggcccctgttggtagatggcaaaaaggtgggatcttgatccaatggagtgccgaaatggatgctgcaaaagatgagattaaaagaatcaaggaggaagaggatcaggctatgagggaggctcttggcttagctcctaagcgtgcaaaccaagctcaaggtaatcggcttgataagcatgagttctcagaacttgtgaagcgaggttctacggcagaggacttgggtgaagggcatgctgaagcagcacacgtacatggtcttggtttttcaagagcacctgccccttgggatggttcaacttctcttcaacctacagtcaaggggggtgcacctgaaatgggggatattcctgtgcctaagcttccaccaaaagaaaaagttgaagaggagtccgaggatgaaagcagtcgaaggaaaaggaggcgtgaggagaggaagcacgagaaacatgagaggcgtgagaaacgcgataagcatgaaaaacggcattcctcagatgagagaaaacataggaaagacaaggagaagaggagacatgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMtag

Protein Analysis

216

Amino Acids

24.87

Weight (kDa)

9.47

Isoelectric Point (pI)

63.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMtag PF10159 8 - 78 4.5e-24 Multiple myeloma tumor-associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 394
Acc36I ACCTGC 1 cut(s) 394
AccI GTMKAC 1 cut(s) 69
AccII CGCG 1 cut(s) 576
AclWI GGATC 3 cut(s) 139, 146, 216
AcuI CTGAAG 1 cut(s) 366
AfaI GTAC 1 cut(s) 360
AfiI CCNNNNNNNGG 3 cut(s) 17, 398, 446
AflIII ACRYGT 1 cut(s) 355
AgsI TTSAA 4 cut(s) 378, 405, 416, 491
AluBI AGCT 3 cut(s) 239, 260, 469
AluI AGCT 3 cut(s) 239, 260, 469
Alw21I GWGCWC 2 cut(s) 385, 439
Alw26I GTCTC 1 cut(s) 634
Alw44I GTGCAC 1 cut(s) 435
AlwI GGATC 3 cut(s) 139, 146, 216
AoxI GGCC 1 cut(s) 108
ApaLI GTGCAC 1 cut(s) 435
ApeKI GCWGC 2 cut(s) 170, 350
AspS9I GGNCC 1 cut(s) 109
AsuHPI GGTGA 1 cut(s) 344
BaeGI GKGCMC 1 cut(s) 439
BauI CACGAG 1 cut(s) 548
Bbv12I GWGCWC 2 cut(s) 385, 439
BbvI GCAGC 2 cut(s) 157, 362
BccI CCATC 2 cut(s) 117, 392
BceAI ACGGC 2 cut(s) 333, 608
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BcoDI GTCTC 1 cut(s) 634
BfaI CTAG 1 cut(s) 15
BfmI CTRYAG 1 cut(s) 420
BfuAI ACCTGC 1 cut(s) 394
BisI GCNGC 2 cut(s) 171, 351
BlpI GCTNAGC 1 cut(s) 235
BlsI GCNGC 2 cut(s) 172, 352
BmgT120I GGNCC 1 cut(s) 109
BmiI GGNNCC 1 cut(s) 111
BmsI GCATC 2 cut(s) 85, 157
BplI GAGNNNNNCTC 2 cut(s) 211, 243
Bpu10I CCTNAGC 2 cut(s) 243, 465
Bpu1102I GCTNAGC 1 cut(s) 235
BpuEI CTTGAG 1 cut(s) 246
BsaAI YACGTR 1 cut(s) 358
BsaBI GATNNNNATC 1 cut(s) 143
BsaJI CCNNGG 2 cut(s) 392, 501
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 398, 446
Bse8I GATNNNNATC 1 cut(s) 143
BseDI CCNNGG 2 cut(s) 392, 501
BseGI GGATG 4 cut(s) 7, 172, 403, 511
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 3 cut(s) 17, 398, 446
BseMII CTCAG 2 cut(s) 306, 615
BseRI GAGGAG 2 cut(s) 509, 551
BseSI GKGCMC 1 cut(s) 439
BseXI GCAGC 2 cut(s) 157, 362
Bsh1236I CGCG 1 cut(s) 576
BshFI GGCC 1 cut(s) 110
BsiHKAI GWGCWC 2 cut(s) 385, 439
BslFI GGGAC 1 cut(s) 68
BslI CCNNNNNNNGG 3 cut(s) 17, 398, 446
BsmAI GTCTC 1 cut(s) 634
BsmFI GGGAC 1 cut(s) 68
BsmI GAATGC 1 cut(s) 595
BsnI GGCC 1 cut(s) 110
Bsp1286I GDGCHC 2 cut(s) 385, 439
Bsp143I GATC 4 cut(s) 40, 138, 144, 208
Bsp1720I GCTNAGC 1 cut(s) 235
BspANI GGCC 1 cut(s) 110
BspCNI CTCAG 2 cut(s) 305, 614
BspFNI CGCG 1 cut(s) 576
BspLI GGNNCC 1 cut(s) 111
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 3 cut(s) 139, 146, 216
BssECI CCNNGG 2 cut(s) 392, 501
BssMI GATC 4 cut(s) 40, 138, 144, 208
BssSI CACGAG 1 cut(s) 548
BssT1I CCWWGG 1 cut(s) 392
Bst2BI CACGAG 1 cut(s) 548
Bst4CI ACNGT 2 cut(s) 101, 424
Bst6I CTCTTC 4 cut(s) 198, 417, 486, 629
BstBAI YACGTR 1 cut(s) 358
BstC8I GCNNGC 2 cut(s) 249, 342
BstDEI CTNAG 6 cut(s) 235, 243, 292, 465, 601, 648
BstENI CCTNNNNNAGG 1 cut(s) 15
BstF5I GGATG 4 cut(s) 7, 172, 403, 511
BstFNI CGCG 1 cut(s) 576
BstKTI GATC 4 cut(s) 43, 141, 147, 211
BstMAI GTCTC 1 cut(s) 634
BstMBI GATC 4 cut(s) 40, 138, 144, 208
BstMWI GCNNNNNNNGC 3 cut(s) 257, 280, 350
BstNSI RCATGY 2 cut(s) 344, 647
BstSFI CTRYAG 1 cut(s) 420
BstSLI GKGCMC 1 cut(s) 439
BstUI CGCG 1 cut(s) 576
BstV1I GCAGC 2 cut(s) 157, 362
BstX2I RGATCY 1 cut(s) 138
BstYI RGATCY 1 cut(s) 138
BsuRI GGCC 1 cut(s) 110
BtsCI GGATG 4 cut(s) 7, 172, 403, 511
BveI ACCTGC 1 cut(s) 394
Cac8I GCNNGC 2 cut(s) 249, 342
Cfr13I GGNCC 1 cut(s) 109
Csp6I GTAC 1 cut(s) 359
CviAII CATG 6 cut(s) 284, 341, 362, 557, 584, 644
CviJI RGCY 8 cut(s) 110, 215, 227, 234, 239, 260, 274, 469
CviKI_1 RGCY 8 cut(s) 110, 215, 227, 234, 239, 260, 274, 469
CviQI GTAC 1 cut(s) 359
DdeI CTNAG 6 cut(s) 235, 243, 292, 465, 601, 648
DpnI GATC 4 cut(s) 42, 140, 146, 210
DpnII GATC 4 cut(s) 40, 138, 144, 208
Eam1104I CTCTTC 4 cut(s) 198, 417, 486, 629
EarI CTCTTC 4 cut(s) 198, 417, 486, 629
Eco130I CCWWGG 1 cut(s) 392
Eco57I CTGAAG 1 cut(s) 366
EcoNI CCTNNNNNAGG 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 109
EcoT14I CCWWGG 1 cut(s) 392
ErhI CCWWGG 1 cut(s) 392
FaeI CATG 6 cut(s) 287, 344, 365, 560, 587, 647
FaiI YATR 8 cut(s) 218, 285, 342, 363, 558, 585, 618, 645
FaqI GGGAC 1 cut(s) 68
FatI CATG 6 cut(s) 283, 340, 361, 556, 583, 643
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 2 cut(s) 171, 351
FokI GGATG 3 cut(s) 179, 410, 518
Fsp4HI GCNGC 2 cut(s) 171, 351
FspBI CTAG 1 cut(s) 15
GluI GCNGC 2 cut(s) 171, 351
HaeIII GGCC 1 cut(s) 110
Hin1II CATG 6 cut(s) 287, 344, 365, 560, 587, 647
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 2 cut(s) 192, 497
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 70, 437
Hpy188I TCNGA 3 cut(s) 295, 502, 604
Hpy188III TCNNGA 4 cut(s) 38, 80, 142, 378
Hpy8I GTNNAC 2 cut(s) 70, 437
HpyAV CCTTC 2 cut(s) 329, 513
HpyCH4III ACNGT 2 cut(s) 101, 424
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 3 cut(s) 173, 251, 437
HpyF10VI GCNNNNNNNGC 3 cut(s) 257, 280, 350
HpyF3I CTNAG 6 cut(s) 235, 243, 292, 465, 601, 648
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 6 cut(s) 287, 344, 365, 560, 587, 647
Kzo9I GATC 4 cut(s) 40, 138, 144, 208
LmnI GCTCC 1 cut(s) 244
LpnPI CCDG 5 cut(s) 126, 197, 399, 453, 471
Lsp1109I GCAGC 2 cut(s) 157, 362
LweI GCATC 2 cut(s) 85, 157
MaeI CTAG 1 cut(s) 15
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 1 cut(s) 95
MalI GATC 4 cut(s) 42, 140, 146, 210
MboI GATC 4 cut(s) 40, 138, 144, 208
MboII GAAGA 4 cut(s) 215, 404, 503, 646
MflI RGATCY 1 cut(s) 138
MhlI GDGCHC 2 cut(s) 385, 439
MluCI AATT 1 cut(s) 85
MlyI GAGTC 1 cut(s) 506
MseI TTAA 2 cut(s) 63, 186
MslI CAYNNNNRTG 1 cut(s) 360
Mva1269I GAATGC 1 cut(s) 595
MvnI CGCG 1 cut(s) 576
MwoI GCNNNNNNNGC 3 cut(s) 257, 280, 350
NdeII GATC 4 cut(s) 40, 138, 144, 208
NlaIII CATG 6 cut(s) 287, 344, 365, 560, 587, 647
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 95
NspI RCATGY 2 cut(s) 344, 647
PaeI GCATGC 1 cut(s) 344
PaqCI CACCTGC 1 cut(s) 394
PcsI WCGNNNNNNNCGW 1 cut(s) 34
PctI GAATGC 1 cut(s) 595
PfeI GAWTC 1 cut(s) 192
PkrI GCNGC 2 cut(s) 172, 352
PleI GAGTC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 505
Ppu21I YACGTR 1 cut(s) 358
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 1 cut(s) 109
PsuI RGATCY 1 cut(s) 138
RsaI GTAC 1 cut(s) 360
RsaNI GTAC 1 cut(s) 359
RseI CAYNNNNRTG 1 cut(s) 360
SalI GTCGAC 1 cut(s) 68
SaqAI TTAA 2 cut(s) 63, 186
SatI GCNGC 2 cut(s) 171, 351
Sau3AI GATC 4 cut(s) 40, 138, 144, 208
Sau96I GGNCC 1 cut(s) 109
SchI GAGTC 1 cut(s) 506
SduI GDGCHC 2 cut(s) 385, 439
SfaNI GCATC 2 cut(s) 85, 157
SfcI CTRYAG 1 cut(s) 420
SmiMI CAYNNNNRTG 1 cut(s) 360
SmlI CTYRAG 1 cut(s) 261
SmoI CTYRAG 1 cut(s) 261
SphI GCATGC 1 cut(s) 344
Sse9I AATT 1 cut(s) 85
SspMI CTAG 1 cut(s) 15
StyI CCWWGG 1 cut(s) 392
TaaI ACNGT 2 cut(s) 101, 424
TaiI ACGT 1 cut(s) 360
TaqI TCGA 3 cut(s) 37, 69, 517
TasI AATT 1 cut(s) 85
TfiI GAWTC 1 cut(s) 192
Tru1I TTAA 2 cut(s) 63, 186
Tru9I TTAA 2 cut(s) 63, 186
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 2 cut(s) 170, 350
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 2 cut(s) 522, 600
VneI GTGCAC 1 cut(s) 435
XagI CCTNNNNNAGG 1 cut(s) 15
XceI RCATGY 2 cut(s) 344, 647
XmiI GTMKAC 1 cut(s) 69
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.