Rroxscaffold_1G00009310

F-box LRR-repeat protein 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0001664
Physical Location & Seq
Forward (+)
11734642 .. 11739504
4863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009310.1

Sequence Viewer

Length: 2127 bp
ATGCGATCGGGCTCTCATGCGATGGACACAGATGATTGGTTTGGGTTTCTTCGCCGTGGCGAGCTTGAAAGGATAGTTTTGCAATGGTGCTCGCTTGGGAGATGGAAGATAAGCCCGCCGTACTCGGATGAAGAAACCGGCAAACGACGCCGTTATGACCAACCCACTCGACCTCTTCACGGAGGAGATCATCCACGCGATCCTCGACCACCTAAACGACGAGCCGTTCTCCAAAAGTCCTTCTCCTTGTGCTGCAAGTCGTTCTACTTCATCGAGTCCCGCCACCGCAAGTCCCTCACTCCCCTCCGCTCCGAGCTCCTCCACCGCGCCCTCCACCGCTACCCCTCCATCTCGCGTCTCAACCTCACTCTCTGCCCGCGCGTCAGCGACGCCACCCTCGCCTCCGTCGCCGCCACGTGGCGCGCGACGCTCCGTTCGATCAACCTCTCGCGCTCCCGGGACTTCAGCGGCATTGGACTGCGTGTTTTGTCGGGGAGCTGTTCGGGTCTGGCGGAGATCGACGTGTCGAACGGGACGGAGCTGACGGACACGGCGGCGAAGGCTATCGCCGAGGCGAAGAATCTGGAGAAGTTGCGGATGGCGAGGTGTAAGTTGATTAGTGACATAGGGATTGGGTGCATAGCCGTTGGATGTAAGAAGCTGAAGGTGCTGTGCTTAAGGTGGTGCTTACGTGTCACGGATTTGGGCGTTGGATTGGTCGCTGTGAAGTGCAAGCAGCTGAGGAGTTTGGATCTCTCTTGTTTGCCGATCACGGAAAAATGTCTTCCTCCTATCCTGCAACTGCAACATCTTGAAGATTTGATTCTTGAAGGATGCCTTGGAATTGATGATGATGGCCTTGTTAGCCTTAAGCATAGTTGCAGCTCGCTCAAGATGCTTAATTTGTCAAAATGTCAGAATGTTAGTCATGTGGGTTTGTCTTCTCTGACAAATGGTGCTGACAACCTAGAGCAGCTTGTCCTATCATATGGTCCTTCTGTCACCACTGACCTGGGGAAATGCCTCCTTAATTATTCGAGGTTGAAATCGATTAGACTAGATGGTTGTTTGGTTACATGTTCTGGGACTAAAGCAATTGGAAGTTGGTGTGCCTCGTTGAGAGAGCTGAGCTTAAGTAAATGCACTGGAGTGACAGATGAGTGCCTCTCCTTCCTTGTGCAAGCGCATAGGCAGTTGCTGAAACTAGACATCACCTGCTGCCGCAAAATAACTTTGGTCGCTATAGATTGCATAACAAAATCTTGCACATTCCTCACTTCCCTGAGGATGGAATCCTGTAGCCTGGTTTCTAAAGACGCTTTCCTGTTGATTGGCCAGCGTTGCCAATTCTTGGAGGAATTGGATGTCACAGATAACGAAATTGACGATGAAGGCTTAATGTCCATCTCAAGATGTTCCAAACTTTGTAGTCTAAAGCTGGGTGTCTGCTTGAACATTACGGATGAAGGACTTATGCATGTTGGAAGCGGCTGTCGAAAGCTGAAAGAGCTTGATTTGTATAGGTCCTTGGGAGTAACTGATGTGGGCATTGCAAAAATAGCTCAGGGCTGTCCTGATCTGGAGATGATCAACATTGCTTATAATAATAAAATCACAGACTCTTCTTTAATATCATTATCGGAGTGTTTGAGATTAAAGATACTTGAACTTCGAGGATGTCCTTGTGTCTCAACAGTTGGACTTTCAGCAGTTGCTAGGGGATGTAGGCAACTTGCAGTTCTGGACATAAAAAAGTGCGTCAATATCAATGATAATGGCATGCTTGCACTTGGTCAATTTTGCCATAATCTCAGACAGATAAACTTGTCCTACTGTTCGGTCACAGATGTGGGGCTGTTATCTCTCGCCAATACCAACCGCCTACAGAACATGACTATTTTGCACTTGACAGGATTGAGTCCAAATGGCCTTGCTGCTGCCCTATTGGCATGTGGAGGCTTAACAAAAGTTAAGCTTCACACATCCTTGAAACCGTTGCTTCCAAAATATATTTTTGAGTACATGGAAGGTCGTGGTTGTGTGTTTCATTGGAGGGACAAAGCATTCCAGGTGGAAATAGATCCGAAAGGATGGCAACTGCATGTAGGAAGATCTCCTGAACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

708

Amino Acids

78.1

Weight (kDa)

8.88

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 425 - 521 7.3e-09 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 498 - 576 7.6e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 524 - 596 5.3e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 575 - 655 4.6e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1602
AarI CACCTGC 1 cut(s) 1223
Acc36I ACCTGC 1 cut(s) 1223
AccB7I CCANNNNNTGG 1 cut(s) 1351
AccBSI CCGCTC 1 cut(s) 309
AccII CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
AclWI GGATC 3 cut(s) 194, 759, 2075
AcoI YGGCCR 1 cut(s) 1333
AcuI CTGAAG 2 cut(s) 448, 683
AcvI CACGTG 1 cut(s) 417
AcyI GRCGYC 2 cut(s) 148, 390
AfaI GTAC 2 cut(s) 122, 2021
AfiI CCNNNNNNNGG 4 cut(s) 179, 417, 1288, 1351
AflII CTTAAG 3 cut(s) 676, 869, 1132
AflIII ACRYGT 3 cut(s) 522, 691, 1076
AgsI TTSAA 7 cut(s) 68, 815, 830, 1045, 1453, 1667, 1990
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 3 cut(s) 1011, 1302, 2067
AjuI GAANNNNNNNTTGG 2 cut(s) 822, 854
AleI CACNNNNGTG 2 cut(s) 1148, 1847
Alw21I GWGCWC 2 cut(s) 92, 318
Alw26I GTCTC 2 cut(s) 362, 1693
AlwI GGATC 3 cut(s) 194, 759, 2075
AlwNI CAGNNNCTG 1 cut(s) 1198
Ama87I CYCGRG 1 cut(s) 456
AoxI GGCC 3 cut(s) 856, 1333, 1927
ApeKI GCWGC 7 cut(s) 252, 736, 882, 973, 1218, 1934, 1937
ArsI GACNNNNNNTTYG 2 cut(s) 418, 450
AspLEI GCGC 6 cut(s) 329, 381, 423, 425, 453, 1186
AspS9I GGNCC 2 cut(s) 992, 1524
AsuC2I CCSGG 2 cut(s) 457, 458
AsuHPI GGTGA 2 cut(s) 994, 1204
AvaI CYCGRG 1 cut(s) 456
AvaII GGWCC 2 cut(s) 992, 1524
AxyI CCTNAGG 1 cut(s) 1283
BalI TGGCCA 1 cut(s) 1335
BanII GRGCYC 2 cut(s) 14, 318
BbrPI CACGTG 1 cut(s) 417
BbsI GAAGAC 2 cut(s) 776, 933
Bbv12I GWGCWC 2 cut(s) 92, 318
BbvCI CCTCAGC 1 cut(s) 740
BbvI GCAGC 7 cut(s) 239, 748, 894, 985, 1205, 1921, 1924
BccI CCATC 9 cut(s) 16, 96, 356, 592, 848, 1055, 1282, 1412, 2085
BceAI ACGGC 6 cut(s) 39, 103, 135, 209, 567, 629
BciT130I CCWGG 3 cut(s) 1013, 1304, 2069
BclI TGATCA 1 cut(s) 1587
BcnI CCSGG 2 cut(s) 457, 458
BcoDI GTCTC 2 cut(s) 362, 1693
BfaI CTAG 4 cut(s) 968, 1058, 1205, 1716
BfmI CTRYAG 3 cut(s) 1242, 1297, 1883
BfrI CTTAAG 3 cut(s) 676, 869, 1132
BfuAI ACCTGC 1 cut(s) 1223
BglI GCCNNNNNGGC 1 cut(s) 1946
BglII AGATCT 1 cut(s) 2111
BlpI GCTNAGC 1 cut(s) 1127
Bme1390I CCNGG 5 cut(s) 457, 458, 1013, 1304, 2069
Bme18I GGWCC 2 cut(s) 992, 1524
BmeT110I CYCGRG 1 cut(s) 456
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 2 cut(s) 992, 1524
BmrFI CCNGG 5 cut(s) 457, 458, 1013, 1304, 2069
BmsI GCATC 2 cut(s) 824, 885
BpiI GAAGAC 2 cut(s) 776, 933
BplI GAGNNNNNCTC 4 cut(s) 213, 245, 1151, 1183
BpmI CTGGAG 3 cut(s) 605, 1167, 1601
Bpu10I CCTNAGC 2 cut(s) 740, 1563
Bpu1102I GCTNAGC 1 cut(s) 1127
BpuEI CTTGAG 2 cut(s) 875, 1393
BpuMI CCSGG 2 cut(s) 457, 458
Bsa29I ATCGAT 1 cut(s) 1049
BsaAI YACGTR 2 cut(s) 417, 692
BsaHI GRCGYC 2 cut(s) 148, 390
BsaJI CCNNGG 6 cut(s) 55, 456, 570, 838, 1012, 1527
Bsc4I CCNNNNNNNGG 4 cut(s) 179, 417, 1288, 1351
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 1150
Bse21I CCTNAGG 1 cut(s) 1283
Bse3DI GCAATG 3 cut(s) 89, 1548, 1593
BseBI CCWGG 3 cut(s) 1013, 1304, 2069
BseCI ATCGAT 1 cut(s) 1049
BseDI CCNNGG 6 cut(s) 55, 456, 570, 838, 1012, 1527
BseLI CCNNNNNNNGG 4 cut(s) 179, 417, 1288, 1351
BseMI GCAATG 3 cut(s) 89, 1548, 1593
BseMII CTCAG 5 cut(s) 731, 1118, 1274, 1577, 1825
BseNI ACTGG 1 cut(s) 1150
BsePI GCGCGC 1 cut(s) 421
BseRI GAGGAG 3 cut(s) 198, 308, 757
BseXI GCAGC 7 cut(s) 239, 748, 894, 985, 1205, 1921, 1924
BseYI CCCAGC 1 cut(s) 1438
Bsh1236I CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
Bsh1285I CGRYCG 1 cut(s) 8
BshFI GGCC 3 cut(s) 858, 1335, 1929
BshVI ATCGAT 1 cut(s) 1049
BsiEI CGRYCG 1 cut(s) 8
BsiHKAI GWGCWC 2 cut(s) 92, 318
BsiHKCI CYCGRG 1 cut(s) 456
BsiSI CCGG 2 cut(s) 138, 457
BslFI GGGAC 6 cut(s) 262, 277, 473, 547, 1099, 2069
BslI CCNNNNNNNGG 4 cut(s) 179, 417, 1288, 1351
BsmAI GTCTC 2 cut(s) 362, 1693
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 6 cut(s) 262, 277, 473, 547, 1099, 2069
BsmI GAATGC 1 cut(s) 2063
BsnI GGCC 3 cut(s) 858, 1335, 1929
BsoBI CYCGRG 1 cut(s) 456
Bsp1286I GDGCHC 3 cut(s) 14, 92, 318
Bsp1720I GCTNAGC 1 cut(s) 1127
BspANI GGCC 3 cut(s) 858, 1335, 1929
BspCNI CTCAG 5 cut(s) 732, 1119, 1275, 1576, 1824
BspDI ATCGAT 1 cut(s) 1049
BspFNI CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
BspMI ACCTGC 1 cut(s) 1223
BspPI GGATC 3 cut(s) 194, 759, 2075
BspTI CTTAAG 3 cut(s) 676, 869, 1132
BsrBI CCGCTC 1 cut(s) 309
BsrDI GCAATG 3 cut(s) 89, 1548, 1593
BsrFI RCCGGY 1 cut(s) 137
BsrI ACTGG 1 cut(s) 1150
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 6 cut(s) 55, 456, 570, 838, 1012, 1527
BssHII GCGCGC 1 cut(s) 421
BssNI GRCGYC 2 cut(s) 148, 390
BssT1I CCWWGG 2 cut(s) 838, 1527
Bst2UI CCWGG 3 cut(s) 1013, 1304, 2069
Bst4CI ACNGT 3 cut(s) 1696, 1835, 1995
Bst6I CTCTTC 2 cut(s) 180, 1627
BstACI GRCGYC 2 cut(s) 148, 390
BstAFI CTTAAG 3 cut(s) 676, 869, 1132
BstBAI YACGTR 2 cut(s) 417, 692
BstDEI CTNAG 5 cut(s) 740, 1127, 1283, 1563, 1811
BstDSI CCRYGG 1 cut(s) 55
BstFNI CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
BstHHI GCGC 6 cut(s) 329, 381, 423, 425, 453, 1186
BstMAI GTCTC 2 cut(s) 362, 1693
BstMCI CGRYCG 1 cut(s) 8
BstNI CCWGG 3 cut(s) 1013, 1304, 2069
BstNSI RCATGY 5 cut(s) 1080, 1481, 1783, 1953, 2105
BstSCI CCNGG 5 cut(s) 455, 456, 1011, 1302, 2067
BstSFI CTRYAG 3 cut(s) 1242, 1297, 1883
BstUI CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
BstV1I GCAGC 7 cut(s) 239, 748, 894, 985, 1205, 1921, 1924
BstV2I GAAGAC 2 cut(s) 776, 933
BstX2I RGATCY 3 cut(s) 751, 2080, 2111
BstXI CCANNNNNNTGG 1 cut(s) 1012
BstYI RGATCY 3 cut(s) 751, 2080, 2111
Bsu15I ATCGAT 1 cut(s) 1049
Bsu36I CCTNAGG 1 cut(s) 1283
BsuRI GGCC 3 cut(s) 858, 1335, 1929
BsuTUI ATCGAT 1 cut(s) 1049
BtgI CCRYGG 1 cut(s) 55
BtgZI GCGATG 1 cut(s) 35
BtrI CACGTC 1 cut(s) 523
BtsIMutI CAGTG 2 cut(s) 1005, 1143
BveI ACCTGC 1 cut(s) 1223
CaiI CAGNNNCTG 1 cut(s) 1198
CfoI GCGC 6 cut(s) 329, 381, 423, 425, 453, 1186
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 2 cut(s) 992, 1524
Cfr9I CCCGGG 1 cut(s) 456
ClaI ATCGAT 1 cut(s) 1049
CseI GACGC 7 cut(s) 156, 344, 370, 398, 436, 1325, 1747
Csp6I GTAC 2 cut(s) 121, 2020
CviAII CATG 9 cut(s) 17, 929, 1077, 1478, 1780, 1891, 1950, 2023, 2102
CviQI GTAC 2 cut(s) 121, 2020
DdeI CTNAG 5 cut(s) 740, 1127, 1283, 1563, 1811
EaeI YGGCCR 1 cut(s) 1333
Eam1104I CTCTTC 2 cut(s) 180, 1627
EarI CTCTTC 2 cut(s) 180, 1627
EciI GGCGGA 1 cut(s) 527
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 2 cut(s) 838, 1527
Eco24I GRGCYC 2 cut(s) 14, 318
Eco47I GGWCC 2 cut(s) 992, 1524
Eco53kI GAGCTC 1 cut(s) 316
Eco57I CTGAAG 2 cut(s) 448, 683
Eco72I CACGTG 1 cut(s) 417
Eco81I CCTNAGG 1 cut(s) 1283
Eco88I CYCGRG 1 cut(s) 456
EcoICRI GAGCTC 1 cut(s) 316
EcoO109I RGGNCCY 1 cut(s) 1524
EcoRII CCWGG 3 cut(s) 1011, 1302, 2067
EcoT14I CCWWGG 2 cut(s) 838, 1527
EcoT22I ATGCAT 1 cut(s) 1479
EcoT38I GRGCYC 2 cut(s) 14, 318
ErhI CCWWGG 2 cut(s) 838, 1527
Esp3I CGTCTC 1 cut(s) 362
FaeI CATG 9 cut(s) 20, 932, 1080, 1481, 1783, 1894, 1953, 2026, 2105
FalI AAGNNNNNCTT 4 cut(s) 822, 854, 1959, 1991
FaqI GGGAC 6 cut(s) 262, 277, 473, 547, 1099, 2069
FatI CATG 9 cut(s) 16, 928, 1076, 1477, 1779, 1890, 1949, 2022, 2101
FauI CCCGC 3 cut(s) 123, 287, 384
FauNDI CATATG 1 cut(s) 988
FbaI TGATCA 1 cut(s) 1587
FriOI GRGCYC 2 cut(s) 14, 318
FspBI CTAG 4 cut(s) 968, 1058, 1205, 1716
GlaI GCGC 6 cut(s) 328, 380, 422, 424, 452, 1185
GsaI CCCAGC 1 cut(s) 1442
GsuI CTGGAG 3 cut(s) 605, 1167, 1601
HaeIII GGCC 3 cut(s) 858, 1335, 1929
HapII CCGG 2 cut(s) 138, 457
HgaI GACGC 7 cut(s) 156, 344, 370, 398, 436, 1325, 1747
HhaI GCGC 6 cut(s) 329, 381, 423, 425, 453, 1186
Hin1I GRCGYC 2 cut(s) 148, 390
Hin1II CATG 9 cut(s) 20, 932, 1080, 1481, 1783, 1894, 1953, 2026, 2105
Hin6I GCGC 6 cut(s) 327, 379, 421, 423, 451, 1184
HinP1I GCGC 6 cut(s) 327, 379, 421, 423, 451, 1184
HindIII AAGCTT 1 cut(s) 1973
HinfI GANTC 6 cut(s) 275, 580, 823, 1292, 1619, 1918
HpaII CCGG 2 cut(s) 138, 457
HphI GGTGA 2 cut(s) 994, 1204
Hpy188I TCNGA 7 cut(s) 127, 313, 918, 948, 1642, 1814, 2085
Hpy188III TCNNGA 9 cut(s) 584, 812, 827, 892, 1410, 1574, 1580, 1742, 2117
Hpy99I CGWCG 6 cut(s) 150, 222, 392, 410, 430, 524
HpyAV CCTTC 9 cut(s) 250, 553, 658, 824, 1005, 1180, 1385, 1460, 2021
HpyCH4III ACNGT 3 cut(s) 1696, 1835, 1995
HpyCH4IV ACGT 3 cut(s) 416, 522, 691
HpyF3I CTNAG 5 cut(s) 740, 1127, 1283, 1563, 1811
HpySE526I ACGT 3 cut(s) 416, 522, 691
Hsp92I GRCGYC 2 cut(s) 148, 390
Hsp92II CATG 9 cut(s) 20, 932, 1080, 1481, 1783, 1894, 1953, 2026, 2105
HspAI GCGC 6 cut(s) 327, 379, 421, 423, 451, 1184
Ksp22I TGATCA 1 cut(s) 1587
LmnI GCTCC 6 cut(s) 314, 321, 435, 458, 495, 538
Lsp1109I GCAGC 7 cut(s) 239, 748, 894, 985, 1205, 1921, 1924
LweI GCATC 2 cut(s) 824, 885
MaeI CTAG 4 cut(s) 968, 1058, 1205, 1716
MaeII ACGT 3 cut(s) 416, 522, 691
MaeIII GTNAC 8 cut(s) 620, 694, 1000, 1072, 1150, 1366, 1534, 1840
MbiI CCGCTC 1 cut(s) 309
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 3 cut(s) 751, 2080, 2111
MhlI GDGCHC 3 cut(s) 14, 92, 318
MlsI TGGCCA 1 cut(s) 1335
MluCI AATT 8 cut(s) 843, 901, 1030, 1095, 1346, 1358, 1380, 1796
MluNI TGGCCA 1 cut(s) 1335
MlyI GAGTC 3 cut(s) 284, 1613, 1927
MmeI TCCRAC 4 cut(s) 628, 691, 1462, 1678
Mox20I TGGCCA 1 cut(s) 1335
Mph1103I ATGCAT 1 cut(s) 1479
MscI TGGCCA 1 cut(s) 1335
MslI CAYNNNNRTG 2 cut(s) 1148, 1847
Msp20I TGGCCA 1 cut(s) 1335
MspA1I CMGCKG 2 cut(s) 468, 739
MspCI CTTAAG 3 cut(s) 676, 869, 1132
MspI CCGG 2 cut(s) 138, 457
MspR9I CCNGG 5 cut(s) 457, 458, 1013, 1304, 2069
MunI CAATTG 1 cut(s) 1095
Mva1269I GAATGC 1 cut(s) 2063
MvaI CCWGG 3 cut(s) 1013, 1304, 2069
MvnI CGCG 8 cut(s) 198, 327, 355, 379, 381, 423, 425, 451
NciI CCSGG 2 cut(s) 457, 458
NdeI CATATG 1 cut(s) 988
NlaIII CATG 9 cut(s) 20, 932, 1080, 1481, 1783, 1894, 1953, 2026, 2105
NmeAIII GCCGAG 1 cut(s) 595
NmuCI GTSAC 6 cut(s) 620, 694, 1000, 1150, 1366, 1840
NsiI ATGCAT 1 cut(s) 1479
NspI RCATGY 5 cut(s) 1080, 1481, 1783, 1953, 2105
OliI CACNNNNGTG 2 cut(s) 1148, 1847
PaeI GCATGC 1 cut(s) 1783
PaqCI CACCTGC 1 cut(s) 1223
PauI GCGCGC 1 cut(s) 421
PciI ACATGT 1 cut(s) 1076
PcsI WCGNNNNNNNCGW 4 cut(s) 202, 422, 434, 1383
PctI GAATGC 1 cut(s) 2063
PfeI GAWTC 3 cut(s) 580, 823, 1292
PflMI CCANNNNNTGG 1 cut(s) 1351
Ple19I CGATCG 1 cut(s) 8
PleI GAGTC 3 cut(s) 283, 1613, 1926
PmaCI CACGTG 1 cut(s) 417
PmlI CACGTG 1 cut(s) 417
PpsI GAGTC 3 cut(s) 283, 1613, 1926
Ppu21I YACGTR 2 cut(s) 417, 692
PpuMI RGGWCCY 1 cut(s) 1524
PscI ACATGT 1 cut(s) 1076
PsiI TTATAA 1 cut(s) 1602
Psp124BI GAGCTC 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 1524
Psp6I CCWGG 3 cut(s) 1011, 1302, 2067
PspCI CACGTG 1 cut(s) 417
PspFI CCCAGC 1 cut(s) 1438
PspGI CCWGG 3 cut(s) 1011, 1302, 2067
PspPI GGNCC 2 cut(s) 992, 1524
PspPPI RGGWCCY 1 cut(s) 1524
PstNI CAGNNNCTG 1 cut(s) 1198
PsuI RGATCY 3 cut(s) 751, 2080, 2111
PteI GCGCGC 1 cut(s) 421
PvuI CGATCG 1 cut(s) 8
PvuII CAGCTG 1 cut(s) 739
RsaI GTAC 2 cut(s) 122, 2021
RsaNI GTAC 2 cut(s) 121, 2020
RseI CAYNNNNRTG 2 cut(s) 1148, 1847
SacI GAGCTC 1 cut(s) 318
Sau96I GGNCC 2 cut(s) 992, 1524
SchI GAGTC 3 cut(s) 284, 1613, 1927
ScrFI CCNGG 5 cut(s) 457, 458, 1013, 1304, 2069
SduI GDGCHC 3 cut(s) 14, 92, 318
SfaNI GCATC 2 cut(s) 824, 885
SfcI CTRYAG 3 cut(s) 1242, 1297, 1883
SinI GGWCC 2 cut(s) 992, 1524
SmaI CCCGGG 1 cut(s) 458
SmiMI CAYNNNNRTG 2 cut(s) 1148, 1847
SmlI CTYRAG 5 cut(s) 676, 869, 890, 1132, 1408
SmoI CTYRAG 5 cut(s) 676, 869, 890, 1132, 1408
SphI GCATGC 1 cut(s) 1783
Sse9I AATT 8 cut(s) 843, 901, 1030, 1095, 1346, 1358, 1380, 1796
SspMI CTAG 4 cut(s) 968, 1058, 1205, 1716
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 5 cut(s) 455, 456, 1011, 1302, 2067
StyI CCWWGG 2 cut(s) 838, 1527
TaaI ACNGT 3 cut(s) 1696, 1835, 1995
TaiI ACGT 3 cut(s) 419, 525, 694
TaqII GACCGA 1 cut(s) 1828
TasI AATT 8 cut(s) 843, 901, 1030, 1095, 1346, 1358, 1380, 1796
TatI WGTACW 1 cut(s) 2019
TauI GCSGC 5 cut(s) 413, 471, 557, 1224, 1491
TfiI GAWTC 3 cut(s) 580, 823, 1292
TscAI CASTG 2 cut(s) 1012, 1150
TseFI GTSAC 6 cut(s) 620, 694, 1000, 1150, 1366, 1840
TseI GCWGC 7 cut(s) 252, 736, 882, 973, 1218, 1934, 1937
Tsp45I GTSAC 6 cut(s) 620, 694, 1000, 1150, 1366, 1840
TspDTI ATGAA 5 cut(s) 144, 259, 1404, 1479, 2036
TspGWI ACGGA 8 cut(s) 195, 394, 422, 551, 560, 713, 788, 1475
TspMI CCCGGG 1 cut(s) 456
TspRI CASTG 2 cut(s) 1012, 1150
Van91I CCANNNNNTGG 1 cut(s) 1351
Vha464I CTTAAG 3 cut(s) 676, 869, 1132
VpaK11BI GGWCC 2 cut(s) 992, 1524
XceI RCATGY 5 cut(s) 1080, 1481, 1783, 1953, 2105
XmaI CCCGGG 1 cut(s) 456
XspI CTAG 4 cut(s) 968, 1058, 1205, 1716
Zsp2I ATGCAT 1 cut(s) 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.