Rroxscaffold_6G00418260

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001664
Physical Location & Seq
Reverse (-)
39803229 .. 39807525
4297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00418260.1

Sequence Viewer

Length: 2058 bp
ATGGCAGCAATAACAACAACAAAAAAACTCAAACGCTCTTCTTCCCTTCAATCCATGAAGAGCCAAAAGGCCATTTTGAACACCAACACCAACACCAACTTCTTCCATTTCCTCTCAGATGAACTCATCTTCATAATCCTGGACTTCCTCACCCCAAACCCAATTGACAGAAAGTCCTTCTCTCTAGTCTGCAAGTCCTTCTACTCCCTAGAATCCAAACACCGCCGCACCCTGACCCCTCTCCGCTCCGAGCACCTCCCCACAATCCTGACCCGGTACCCATCTGTCACCCGCGTCGATCTCACGCTCTGCCCTCGGATCACAGACGCTTCCCTCATCGCAATCTCAAATGCGTGCAAGTCCAACCTCCAAAGCATCGATCTTTCCCGGTCCAAGTACTTCTCCGGAGCCGGGCTACAGAGCCTGGCCTTGAATTGCAAGAATATGGTGGAGATTGACTTATCCAATGCGACGGAGCTCCGAGACTCGGCCGCTGCGGCTCTGGCCGAGGCCAAGAACTTGGAGAGGCTCTGGTTGGGAAGGTGCAAGATGATTACGGACATGGGTGTGGGGTGTATAGCGGTTGGTTGTAGGAAGATGAAATTGATTAGCTTAAAATGGTGCCTCGGTGTTGGTGACTTGGGAATTGAGTTGCTTGCCCTCAAGTGTAAAGATCTTCAAAGTTTGGATCTGTCTTACCTGCCGATCACAGAAAAATGTTTACACTCGATCTTCAAGTTACCGCATCTTGAGGATTTGGTTCTAGAAGGATGCTTTGGCATCGATGATGACAGCCTTGCAGCCCTCAAACATGGGTGCAAGTCGCTAAAGAAGCTTGACATATCAAGTTGTCAGAACATTAGTCATAATGGTTTGGCTTCCCTAACTAGTGGTGGAGTTCTAGAGCAACTCGTATTGTCCCATGGCTCTCCTGTGACTCTTGCTCTTGCTGATAGTTTGAAAAAGCTACCGATGTTGCAGTCAATCAAATTAGATGGTTGCTCGATTACTTATGCTGGACTGCAAGCAATTGGAAACTGGTGTGTGTCATTAAGGGAGCTGAGCTTAAGTAAATGTCCTGGGGTGACAGATGAGGGGCTCTCCTCCCTTTTGACAAAACACAAAGATCTGCGGAAGTTAGACATCACGTGTTGCCGAATGATAACTTATACTTCCATAGATCATATTACGTTATCATGCACCGCACTCACTTCTCTTAGGATGGAGTCATGCACCCTGGTTCCAAGAGAAGCATTCGTCCTCATTGGGCAGAGATGCTGTTTTCTTGAGGAGATTGACATAACAGATAATGAAGTTGATGATGAAGGTTTGAAGTCGATCTCCCGATGTTCGGAACTCTCCAGCTTAAAACTAGGAATTTGCCTAAACATAACTGATGAGGGAGTTGCTCAGGTTGGCATGTGCTGCTCGAAACTTGTAGAGCTCGATTTGTACAGGTGCACGGGAATTTCAGATTCAGGCATTTCAGCCATTGCTTGTGGTTGTCCTGGGCTCGAGATGATTAATATAGCTTACTGTAAAGACATTACTGATAGTTCACTAATCTCATTGTCGAAATGCTCAAGTTTGAACACAGTAGAAAGTCGAGGATGCCCTCTTATCACATCTTTGGGTCTAGCTGCAATTGCTGTGGGATGCAAGCAATTGGTCAAGCTGGACATAAAAAAGTGCATCAATATTGATGATGCTGGGATGATCCCACTTGCTCACTTCTCTCAGAACCTTAGACAGATTAATTTGTCATATACTTCTGTTACGGATGTCGGGCTGTTGTCCCTAGCCAGCATCAGCTGCCTGCAGAGCTTAACCATCTTGCATTTGAAGGGCTTGACTGCTAGTGGGCTTGCAGCTGCCTTATTGGCATGCGGAGGGCTAACAAAAGTAAAGCTCCAGGCAACCTTCAAGTCATTGCTACCCCAAGCTCTTTTCGAACATTTAGAAGCACGCGGTTGTCTGTTTCTGTGGAGAGATAAATTTTTCCGGGCTGAACTCGACCCTCAGTGTTGGAAATTACAGTTGGAAGATAACATACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

685

Amino Acids

74.59

Weight (kDa)

7.91

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 102 - 204 7.9e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 222 - 301 6.3e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 304 - 416 5.2e-08 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 362 - 501 2.8e-13 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 538 - 634 7.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 708
Acc65I GGTACC 1 cut(s) 276
AccB1I GGYRCC 2 cut(s) 276, 621
AccBSI CCGCTC 1 cut(s) 246
AccII CGCG 2 cut(s) 294, 1968
AccIII TCCGGA 1 cut(s) 404
AclWI GGATC 3 cut(s) 326, 696, 1711
AcoI YGGCCR 2 cut(s) 489, 504
AcsI RAATTY 3 cut(s) 1377, 1467, 1994
AcvI CACGTG 1 cut(s) 1149
AfaI GTAC 3 cut(s) 278, 398, 1454
AfiI CCNNNNNNNGG 3 cut(s) 411, 487, 1351
AflII CTTAAG 1 cut(s) 1066
AflIII ACRYGT 1 cut(s) 1148
AhdI GACNNNNNGTC 1 cut(s) 172
AhlI ACTAGT 1 cut(s) 887
AjnI CCWGG 6 cut(s) 138, 423, 1078, 1236, 1507, 1911
AjuI GAANNNNNNNTTGG 6 cut(s) 83, 115, 759, 791, 2021, 2053
Alw21I GWGCWC 4 cut(s) 255, 480, 1446, 1463
Alw26I GTCTC 1 cut(s) 477
Alw44I GTGCAC 1 cut(s) 1459
AlwI GGATC 3 cut(s) 326, 696, 1711
AlwNI CAGNNNCTG 1 cut(s) 424
Ama87I CYCGRG 1 cut(s) 1514
Aor13HI TCCGGA 1 cut(s) 404
AoxI GGCC 5 cut(s) 69, 426, 489, 504, 510
ApaLI GTGCAC 1 cut(s) 1459
ApeKI GCWGC 8 cut(s) 5, 494, 800, 1425, 1640, 1812, 1868, 1871
ApoI RAATTY 3 cut(s) 1377, 1467, 1994
AseI ATTAAT 2 cut(s) 1524, 1755
Asp718I GGTACC 1 cut(s) 276
AspS9I GGNCC 1 cut(s) 390
AsuC2I CCSGG 4 cut(s) 274, 388, 412, 2003
AsuHPI GGTGA 4 cut(s) 142, 280, 647, 1096
AsuII TTCGAA 1 cut(s) 1950
AvaI CYCGRG 1 cut(s) 1514
AvaII GGWCC 1 cut(s) 390
BaeGI GKGCMC 1 cut(s) 1463
BanI GGYRCC 2 cut(s) 276, 621
BanII GRGCYC 4 cut(s) 480, 1101, 1446, 1515
BarI GAAGNNNNNNTAC 1 cut(s) 2034
BbrPI CACGTG 1 cut(s) 1149
Bbv12I GWGCWC 4 cut(s) 255, 480, 1446, 1463
BbvI GCAGC 8 cut(s) 17, 481, 812, 1412, 1627, 1799, 1858, 1880
BccI CCATC 4 cut(s) 289, 989, 1216, 1838
BciT130I CCWGG 6 cut(s) 140, 425, 1080, 1238, 1509, 1913
BcnI CCSGG 4 cut(s) 274, 388, 412, 2003
BcoDI GTCTC 1 cut(s) 477
BcuI ACTAGT 1 cut(s) 887
BfaI CTAG 9 cut(s) 185, 209, 764, 888, 902, 1373, 1637, 1799, 1857
BfmI CTRYAG 2 cut(s) 416, 1817
BfrI CTTAAG 1 cut(s) 1066
BfuAI ACCTGC 1 cut(s) 708
BglI GCCNNNNNGGC 2 cut(s) 497, 1880
BglII AGATCT 2 cut(s) 673, 1126
BlpI GCTNAGC 1 cut(s) 1061
BmcAI AGTACT 1 cut(s) 398
Bme18I GGWCC 1 cut(s) 390
BmeRI GACNNNNNGTC 1 cut(s) 172
BmeT110I CYCGRG 1 cut(s) 1514
BmgT120I GGNCC 1 cut(s) 390
BmiI GGNNCC 4 cut(s) 278, 409, 623, 1242
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpmI CTGGAG 2 cut(s) 1345, 1895
Bpu10I CCTNAGC 1 cut(s) 1410
Bpu1102I GCTNAGC 1 cut(s) 1061
Bpu14I TTCGAA 1 cut(s) 1950
BpuEI CTTGAG 4 cut(s) 647, 770, 1307, 1567
BpuMI CCSGG 4 cut(s) 274, 388, 412, 2003
Bsa29I ATCGAT 2 cut(s) 378, 783
BsaAI YACGTR 1 cut(s) 1149
BsaJI CCNNGG 7 cut(s) 314, 507, 625, 922, 1079, 1236, 1508
BsaWI WCCGGW 1 cut(s) 404
Bsc4I CCNNNNNNNGG 3 cut(s) 411, 487, 1351
Bse1I ACTGG 1 cut(s) 1043
Bse3DI GCAATG 2 cut(s) 1491, 1928
BseAI TCCGGA 1 cut(s) 404
BseBI CCWGG 6 cut(s) 140, 425, 1080, 1238, 1509, 1913
BseCI ATCGAT 2 cut(s) 378, 783
BseDI CCNNGG 7 cut(s) 314, 507, 625, 922, 1079, 1236, 1508
BseGI GGATG 6 cut(s) 776, 1227, 1616, 1661, 1719, 1786
BseLI CCNNNNNNNGG 3 cut(s) 411, 487, 1351
BseMI GCAATG 2 cut(s) 1491, 1928
BseMII CTCAG 5 cut(s) 129, 1052, 1424, 1751, 2033
BseNI ACTGG 1 cut(s) 1043
BseRI GAGGAG 2 cut(s) 1093, 1304
BseSI GKGCMC 1 cut(s) 1463
BseX3I CGGCCG 1 cut(s) 489
BseXI GCAGC 8 cut(s) 17, 481, 812, 1412, 1627, 1799, 1858, 1880
BseYI CCCAGC 1 cut(s) 1709
Bsh1236I CGCG 2 cut(s) 294, 1968
Bsh1285I CGRYCG 1 cut(s) 492
BshFI GGCC 5 cut(s) 71, 428, 491, 506, 512
BshNI GGYRCC 2 cut(s) 276, 621
BshVI ATCGAT 2 cut(s) 378, 783
BsiEI CGRYCG 1 cut(s) 492
BsiHKAI GWGCWC 4 cut(s) 255, 480, 1446, 1463
BsiHKCI CYCGRG 1 cut(s) 1514
BsiSI CCGG 5 cut(s) 274, 388, 405, 411, 2002
BslFI GGGAC 2 cut(s) 904, 1780
BslI CCNNNNNNNGG 3 cut(s) 411, 487, 1351
BsmAI GTCTC 1 cut(s) 477
BsmFI GGGAC 2 cut(s) 904, 1780
BsmI GAATGC 1 cut(s) 1253
BsnI GGCC 5 cut(s) 71, 428, 491, 506, 512
BsoBI CYCGRG 1 cut(s) 1514
Bsp119I TTCGAA 1 cut(s) 1950
Bsp1286I GDGCHC 6 cut(s) 255, 480, 1101, 1446, 1463, 1515
Bsp13I TCCGGA 1 cut(s) 404
Bsp1407I TGTACA 1 cut(s) 1452
Bsp1720I GCTNAGC 1 cut(s) 1061
Bsp19I CCATGG 1 cut(s) 922
BspANI GGCC 5 cut(s) 71, 428, 491, 506, 512
BspCNI CTCAG 5 cut(s) 128, 1053, 1423, 1750, 2032
BspDI ATCGAT 2 cut(s) 378, 783
BspEI TCCGGA 1 cut(s) 404
BspFNI CGCG 2 cut(s) 294, 1968
BspLI GGNNCC 4 cut(s) 278, 409, 623, 1242
BspMAI CTGCAG 1 cut(s) 1821
BspMI ACCTGC 1 cut(s) 708
BspPI GGATC 3 cut(s) 326, 696, 1711
BspQI GCTCTTC 2 cut(s) 43, 53
BspT104I TTCGAA 1 cut(s) 1950
BspT107I GGYRCC 2 cut(s) 276, 621
BspTI CTTAAG 1 cut(s) 1066
BsrBI CCGCTC 1 cut(s) 246
BsrDI GCAATG 2 cut(s) 1491, 1928
BsrGI TGTACA 1 cut(s) 1452
BsrI ACTGG 1 cut(s) 1043
BssECI CCNNGG 7 cut(s) 314, 507, 625, 922, 1079, 1236, 1508
BssT1I CCWWGG 1 cut(s) 922
Bst2UI CCWGG 6 cut(s) 140, 425, 1080, 1238, 1509, 1913
Bst4CI ACNGT 4 cut(s) 1538, 1597, 2037, 2055
Bst6I CTCTTC 2 cut(s) 43, 53
BstAFI CTTAAG 1 cut(s) 1066
BstAPI GCANNNNNTGC 2 cut(s) 1425, 1812
BstAUI TGTACA 1 cut(s) 1452
BstBAI YACGTR 1 cut(s) 1149
BstBI TTCGAA 1 cut(s) 1950
BstC8I GCNNGC 9 cut(s) 355, 657, 1026, 1661, 1804, 1817, 1866, 1885, 1966
BstDEI CTNAG 7 cut(s) 115, 1061, 1217, 1410, 1737, 1745, 2019
BstDSI CCRYGG 1 cut(s) 922
BstF5I GGATG 6 cut(s) 776, 1227, 1616, 1661, 1719, 1786
BstFNI CGCG 2 cut(s) 294, 1968
BstMAI GTCTC 1 cut(s) 477
BstMCI CGRYCG 1 cut(s) 492
BstMWI GCNNNNNNNGC 8 cut(s) 497, 503, 832, 1425, 1646, 1812, 1821, 1880
BstNI CCWGG 6 cut(s) 140, 425, 1080, 1238, 1509, 1913
BstNSI RCATGY 2 cut(s) 1423, 1887
BstSFI CTRYAG 2 cut(s) 416, 1817
BstSLI GKGCMC 1 cut(s) 1463
BstUI CGCG 2 cut(s) 294, 1968
BstV1I GCAGC 8 cut(s) 17, 481, 812, 1412, 1627, 1799, 1858, 1880
BstX2I RGATCY 3 cut(s) 673, 688, 1126
BstXI CCANNNNNNTGG 1 cut(s) 520
BstYI RGATCY 3 cut(s) 673, 688, 1126
BstZI CGGCCG 1 cut(s) 489
Bsu15I ATCGAT 2 cut(s) 378, 783
BsuRI GGCC 5 cut(s) 71, 428, 491, 506, 512
BsuTUI ATCGAT 2 cut(s) 378, 783
BtgI CCRYGG 1 cut(s) 922
BtgZI GCGATG 1 cut(s) 322
BtsCI GGATG 6 cut(s) 776, 1227, 1616, 1661, 1719, 1786
BtsIMutI CAGTG 1 cut(s) 2027
BveI ACCTGC 1 cut(s) 708
Cac8I GCNNGC 9 cut(s) 355, 657, 1026, 1661, 1804, 1817, 1866, 1885, 1966
CaiI CAGNNNCTG 1 cut(s) 424
Cfr13I GGNCC 1 cut(s) 390
ClaI ATCGAT 2 cut(s) 378, 783
CseI GACGC 2 cut(s) 283, 335
Csp6I GTAC 3 cut(s) 277, 397, 1453
CspCI CAANNNNNGTGG 2 cut(s) 1632, 1667
CviAII CATG 8 cut(s) 55, 562, 812, 923, 1197, 1230, 1420, 1884
CviQI GTAC 3 cut(s) 277, 397, 1453
DdeI CTNAG 7 cut(s) 115, 1061, 1217, 1410, 1737, 1745, 2019
DriI GACNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 2 cut(s) 489, 504
EagI CGGCCG 1 cut(s) 489
Eam1104I CTCTTC 2 cut(s) 43, 53
Eam1105I GACNNNNNGTC 1 cut(s) 172
EarI CTCTTC 2 cut(s) 43, 53
Ecl136II GAGCTC 2 cut(s) 478, 1444
EclXI CGGCCG 1 cut(s) 489
Eco130I CCWWGG 1 cut(s) 922
Eco24I GRGCYC 4 cut(s) 480, 1101, 1446, 1515
Eco47I GGWCC 1 cut(s) 390
Eco52I CGGCCG 1 cut(s) 489
Eco53kI GAGCTC 2 cut(s) 478, 1444
Eco72I CACGTG 1 cut(s) 1149
Eco88I CYCGRG 1 cut(s) 1514
EcoICRI GAGCTC 2 cut(s) 478, 1444
EcoRII CCWGG 6 cut(s) 138, 423, 1078, 1236, 1507, 1911
EcoT14I CCWWGG 1 cut(s) 922
EcoT38I GRGCYC 4 cut(s) 480, 1101, 1446, 1515
ErhI CCWWGG 1 cut(s) 922
FaeI CATG 8 cut(s) 58, 565, 815, 926, 1200, 1233, 1423, 1887
FaqI GGGAC 2 cut(s) 904, 1780
FatI CATG 8 cut(s) 54, 561, 811, 922, 1196, 1229, 1419, 1883
FauI CCCGC 1 cut(s) 299
FokI GGATG 6 cut(s) 783, 1234, 1623, 1668, 1726, 1793
FriOI GRGCYC 4 cut(s) 480, 1101, 1446, 1515
FspBI CTAG 9 cut(s) 185, 209, 764, 888, 902, 1373, 1637, 1799, 1857
GsaI CCCAGC 1 cut(s) 1713
GsuI CTGGAG 2 cut(s) 1345, 1895
HaeIII GGCC 5 cut(s) 71, 428, 491, 506, 512
HapII CCGG 5 cut(s) 274, 388, 405, 411, 2002
HgaI GACGC 2 cut(s) 283, 335
Hin1II CATG 8 cut(s) 58, 565, 815, 926, 1200, 1233, 1423, 1887
HindIII AAGCTT 1 cut(s) 833
HinfI GANTC 5 cut(s) 212, 485, 937, 1226, 1475
HpaII CCGG 5 cut(s) 274, 388, 405, 411, 2002
HphI GGTGA 4 cut(s) 142, 280, 647, 1096
Hpy166II GTNNAC 3 cut(s) 722, 1461, 1559
Hpy188I TCNGA 8 cut(s) 118, 250, 318, 482, 855, 1354, 1474, 1740
Hpy188III TCNNGA 8 cut(s) 268, 405, 749, 764, 902, 1286, 1344, 1516
Hpy8I GTNNAC 3 cut(s) 722, 1461, 1559
Hpy99I CGWCG 2 cut(s) 299, 475
HpyAV CCTTC 8 cut(s) 56, 187, 208, 534, 761, 1319, 1837, 1930
HpyCH4III ACNGT 4 cut(s) 1538, 1597, 2037, 2055
HpyCH4IV ACGT 2 cut(s) 1148, 1190
HpyF10VI GCNNNNNNNGC 8 cut(s) 497, 503, 832, 1425, 1646, 1812, 1821, 1880
HpyF3I CTNAG 7 cut(s) 115, 1061, 1217, 1410, 1737, 1745, 2019
HpySE526I ACGT 2 cut(s) 1148, 1190
Hsp92II CATG 8 cut(s) 58, 565, 815, 926, 1200, 1233, 1423, 1887
Kpn2I TCCGGA 1 cut(s) 404
KpnI GGTACC 1 cut(s) 280
LguI GCTCTTC 2 cut(s) 43, 53
LmnI GCTCC 6 cut(s) 251, 407, 475, 483, 1057, 1914
Lsp1109I GCAGC 8 cut(s) 17, 481, 812, 1412, 1627, 1799, 1858, 1880
MaeI CTAG 9 cut(s) 185, 209, 764, 888, 902, 1373, 1637, 1799, 1857
MaeII ACGT 2 cut(s) 1148, 1190
MaeIII GTNAC 6 cut(s) 286, 635, 738, 934, 1084, 1774
MbiI CCGCTC 1 cut(s) 246
MboII GAAGA 9 cut(s) 30, 33, 70, 94, 121, 607, 668, 724, 2054
MfeI CAATTG 4 cut(s) 162, 1029, 1644, 1664
MflI RGATCY 3 cut(s) 673, 688, 1126
MhlI GDGCHC 6 cut(s) 255, 480, 1101, 1446, 1463, 1515
MlyI GAGTC 3 cut(s) 479, 931, 1235
MmeI TCCRAC 3 cut(s) 387, 2006, 2019
MroI TCCGGA 1 cut(s) 404
MseI TTAA 7 cut(s) 614, 1052, 1067, 1367, 1524, 1755, 1826
MslI CAYNNNNRTG 1 cut(s) 566
MspA1I CMGCKG 3 cut(s) 494, 1812, 1871
MspCI CTTAAG 1 cut(s) 1066
MspI CCGG 5 cut(s) 274, 388, 405, 411, 2002
MunI CAATTG 4 cut(s) 162, 1029, 1644, 1664
Mva1269I GAATGC 1 cut(s) 1253
MvaI CCWGG 6 cut(s) 140, 425, 1080, 1238, 1509, 1913
MvnI CGCG 2 cut(s) 294, 1968
MwoI GCNNNNNNNGC 8 cut(s) 497, 503, 832, 1425, 1646, 1812, 1821, 1880
NciI CCSGG 4 cut(s) 274, 388, 412, 2003
NcoI CCATGG 1 cut(s) 922
NlaIII CATG 8 cut(s) 58, 565, 815, 926, 1200, 1233, 1423, 1887
NlaIV GGNNCC 4 cut(s) 278, 409, 623, 1242
NmeAIII GCCGAG 2 cut(s) 467, 532
NmuCI GTSAC 4 cut(s) 286, 635, 934, 1084
NspI RCATGY 2 cut(s) 1423, 1887
NspV TTCGAA 1 cut(s) 1950
PaeI GCATGC 1 cut(s) 1887
PaeR7I CTCGAG 1 cut(s) 1514
PciSI GCTCTTC 2 cut(s) 43, 53
PctI GAATGC 1 cut(s) 1253
PfeI GAWTC 2 cut(s) 212, 1475
PfoI TCCNGGA 1 cut(s) 138
PleI GAGTC 3 cut(s) 479, 931, 1234
PmaCI CACGTG 1 cut(s) 1149
PmlI CACGTG 1 cut(s) 1149
PpsI GAGTC 3 cut(s) 479, 931, 1234
Ppu21I YACGTR 1 cut(s) 1149
PshBI ATTAAT 2 cut(s) 1524, 1755
Psp124BI GAGCTC 2 cut(s) 480, 1446
Psp6I CCWGG 6 cut(s) 138, 423, 1078, 1236, 1507, 1911
PspCI CACGTG 1 cut(s) 1149
PspFI CCCAGC 1 cut(s) 1709
PspGI CCWGG 6 cut(s) 138, 423, 1078, 1236, 1507, 1911
PspN4I GGNNCC 4 cut(s) 278, 409, 623, 1242
PspPI GGNCC 1 cut(s) 390
PstI CTGCAG 1 cut(s) 1821
PstNI CAGNNNCTG 1 cut(s) 424
PsuI RGATCY 3 cut(s) 673, 688, 1126
PvuII CAGCTG 2 cut(s) 1812, 1871
RsaI GTAC 3 cut(s) 278, 398, 1454
RsaNI GTAC 3 cut(s) 277, 397, 1453
RseI CAYNNNNRTG 1 cut(s) 566
SacI GAGCTC 2 cut(s) 480, 1446
SapI GCTCTTC 2 cut(s) 43, 53
SaqAI TTAA 7 cut(s) 614, 1052, 1067, 1367, 1524, 1755, 1826
Sau96I GGNCC 1 cut(s) 390
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 3 cut(s) 479, 931, 1235
SduI GDGCHC 6 cut(s) 255, 480, 1101, 1446, 1463, 1515
SfcI CTRYAG 2 cut(s) 416, 1817
Sfr274I CTCGAG 1 cut(s) 1514
SfuI TTCGAA 1 cut(s) 1950
SinI GGWCC 1 cut(s) 390
SlaI CTCGAG 1 cut(s) 1514
SmiMI CAYNNNNRTG 1 cut(s) 566
SmlI CTYRAG 6 cut(s) 662, 749, 1066, 1286, 1514, 1582
SmoI CTYRAG 6 cut(s) 662, 749, 1066, 1286, 1514, 1582
SpeI ACTAGT 1 cut(s) 887
SphI GCATGC 1 cut(s) 1887
SspI AATATT 1 cut(s) 1699
SspMI CTAG 9 cut(s) 185, 209, 764, 888, 902, 1373, 1637, 1799, 1857
SstI GAGCTC 2 cut(s) 480, 1446
StyI CCWWGG 1 cut(s) 922
TaaI ACNGT 4 cut(s) 1538, 1597, 2037, 2055
TaiI ACGT 2 cut(s) 1151, 1193
TatI WGTACW 2 cut(s) 396, 1452
TauI GCSGC 3 cut(s) 228, 494, 500
TfiI GAWTC 2 cut(s) 212, 1475
Tru1I TTAA 7 cut(s) 614, 1052, 1067, 1367, 1524, 1755, 1826
Tru9I TTAA 7 cut(s) 614, 1052, 1067, 1367, 1524, 1755, 1826
TscAI CASTG 1 cut(s) 2027
TseFI GTSAC 4 cut(s) 286, 635, 934, 1084
TseI GCWGC 8 cut(s) 5, 494, 800, 1425, 1640, 1812, 1868, 1871
Tsp45I GTSAC 4 cut(s) 286, 635, 934, 1084
TspDTI ATGAA 6 cut(s) 71, 121, 135, 614, 1326, 1338
TspGWI ACGGA 3 cut(s) 488, 572, 1793
TspRI CASTG 1 cut(s) 2027
Vha464I CTTAAG 1 cut(s) 1066
VneI GTGCAC 1 cut(s) 1459
VpaK11BI GGWCC 1 cut(s) 390
VspI ATTAAT 2 cut(s) 1524, 1755
XapI RAATTY 3 cut(s) 1377, 1467, 1994
XbaI TCTAGA 2 cut(s) 763, 901
XceI RCATGY 2 cut(s) 1423, 1887
XhoI CTCGAG 1 cut(s) 1514
XspI CTAG 9 cut(s) 185, 209, 764, 888, 902, 1373, 1637, 1799, 1857
ZrmI AGTACT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.