Rw3G009240

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0001664
Physical Location & Seq
Forward (+)
8845299 .. 8849093
3795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G009240.1

Sequence Viewer

Length: 2046 bp
ATGGCAACAACAACAACAAAACTCAAACGCTTTTCTTCCCTTCAATCCATCAAGAGCCAAAAGGCCATTTTGAACACCAACACCAACTTCTTCCATTTCCTCTCAGATGAACTCATCTTCATAATCCTGGACTTCCTCACCCCAAACCCAATTGACAGAAAGTCCTTCTCTCTAGTCTGCAGGTCCTTCTACTCCCTAGAATCCAAACACCGCCGCACCCTGACCCCTCTCCGCTCCGAGCACCTCCCCACAATCCTGACCCGGTACCCATCTGTCACCCGCGTCGATCTCACGCTCTGCCCTCGGATCACAGACGCTTCCCTCATCACAATCTCAAATGCGTGCAAGTCCAACCTCCAAAGCATCGATCTTTCCCGGTCCAAGTACTTCTCCGGAGCCGGGCTACAGAGCTTGGCCTTGAATTGCAAGAATATGGTGGAGATTGACTTATCCAATGCGACGGAGCTCCGAGACTCGGCCGCTGCGGCTCTGGCCGAGGCCAAGAACTTGGAGAGGCTCTGGTTGGGAAGGTGCAAGATGATCACGGACATGGGTGTGGGGTGTATAGCGGTTGGTTGTAGGAAGATGAAATTGATCAGCTTAAAATGGTGCCTCGGTGTTGGTGACTTGGGAATTGAGTTGCTTGCGCTCAAGTGTAAAGATCTTCAAAGTTTGGATCTGTCTTACCTGCCGATCACAGAAAAATGTTTACCGTCGATCTTCAAGTTACCGCATCTTGAGGATTTGGTTCTAGAAGGATGCTTTGGCATCGATGATGACAGCCTTGCAGCCCTCAAACATGGGTGCAAGTCGCTAAAGAAGCTTGACATATCAAGTTGTCAGAACATTAGTCATAATGGTTTGGCTTCCCTAACTAGTGATGGAGTTCTAGAGCAACTCGTATTGTCCCATGGCTCTCCTGTGACTCTTGCTCTTGCTGATAGTTTGAAAAAGCTACCGATGTTGCAGTCAATCAAGTTAGATGGTTGCTCGATTACTTATGCTGGACTGCAAGCGATTGGAAACTGGTGTGTGTCATTAAGGGAGCTGAGCTTAAGTAAATGTCCTGGGGTGACAGATGAGGGGCTCTCCTCCCTTTTGACGAAACACAAAGATCTGCGGAAGTTAGACATCACGTGTTGCCGAATGTTAACTTATACTTCCATAGATCATATTACATTATCATGCACCGCACTCACTTCTCTTAGGATGGAGTCATGCACCCTGGTTCCAAGAGAAGCATTCGTCCTCATTGGGCAGAGATGCCGTTTTCTTGAGGAGATTGACATAACAGATAATGAAGTTGATGATGAAGGTTTGAAGTTGATCTCCAGATGTTCAGAACTCTCCAGCTTAAAACTAGGAATTTGCCTAAACATAACTGACGAGGGAGTTGCTCAGGTTGGCATGTGCTGCTCGAAACTTGTAGAGCTCGATTTGTACAGGTGCACGGGAATTTCAGATTCAGGCATTTCAGCCATTGCTCGTGGTTGTCCTGGGCTCGAGATGATTAATATAGCTTACTGTAAAGACATTACTGATAGTTCACTAATCTCATTGTCGAAATGCTCAAGTTTGAACACAGTAGAAAGTCGAGGATGTCCTCTTATCACATCTTTGGGTCTAGCTGCAATTGCTGTGGGATGCAAGCAATTGGTCAAGCTGGACATAAAAAAGTGCATCAATATTGATGATGCTGGGATGATCCCACTTGCTCACTTCTCTCAGAACCTTAGACAGATTAATTTGTCATATACTTCTGTTACGGATGTCGGGCTGTTGTCCCTAGCCAGCATCAGCTGCCTGCAGAGCTTAACCATCTTGCATTTGAAGGGCTTGACCGCTAGTGGGCTTGCAGCTGCCTTATTGGCATGCGGAGGGCTAACAAAAGTAAAGCTCCAGGCAACCTTCAAGTCATTGTTACCCCAAGCTCTTTTCGAACATTTAGAAGCACGCGGTTGTCTGTTTCTGTGGAGAGATAAATTTTTCCGGGCTGAACTCGACCCTCAGTGTTGGAAATTACAGTTGGAAGATAACATACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

681

Amino Acids

74.4

Weight (kDa)

7.93

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 97 - 198 2.2e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 218 - 298 8.8e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 344 - 494 7.3e-13 Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885 PF25372 533 - 630 4.8e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 171, 696
Acc65I GGTACC 1 cut(s) 264
AccB1I GGYRCC 2 cut(s) 264, 609
AccBSI CCGCTC 1 cut(s) 234
AccII CGCG 2 cut(s) 282, 1956
AccIII TCCGGA 1 cut(s) 392
AclWI GGATC 3 cut(s) 314, 684, 1699
AcoI YGGCCR 2 cut(s) 477, 492
AcsI RAATTY 3 cut(s) 1365, 1455, 1982
AcvI CACGTG 1 cut(s) 1137
AfaI GTAC 3 cut(s) 266, 386, 1442
AfiI CCNNNNNNNGG 3 cut(s) 399, 475, 1848
AflII CTTAAG 1 cut(s) 1054
AflIII ACRYGT 1 cut(s) 1136
AhdI GACNNNNNGTC 1 cut(s) 160
AhlI ACTAGT 1 cut(s) 875
AjnI CCWGG 5 cut(s) 126, 1066, 1224, 1495, 1899
AjuI GAANNNNNNNTTGG 6 cut(s) 71, 103, 747, 779, 2009, 2041
Alw21I GWGCWC 4 cut(s) 243, 468, 1434, 1451
Alw26I GTCTC 1 cut(s) 465
Alw44I GTGCAC 1 cut(s) 1447
AlwI GGATC 3 cut(s) 314, 684, 1699
Ama87I CYCGRG 1 cut(s) 1502
Aor13HI TCCGGA 1 cut(s) 392
AoxI GGCC 5 cut(s) 63, 414, 477, 492, 498
ApaLI GTGCAC 1 cut(s) 1447
ApeKI GCWGC 7 cut(s) 482, 788, 1413, 1628, 1800, 1856, 1859
ApoI RAATTY 3 cut(s) 1365, 1455, 1982
AseI ATTAAT 2 cut(s) 1512, 1743
Asp718I GGTACC 1 cut(s) 264
AspLEI GCGC 1 cut(s) 649
AspS9I GGNCC 2 cut(s) 183, 378
AsuC2I CCSGG 4 cut(s) 262, 376, 400, 1991
AsuHPI GGTGA 4 cut(s) 130, 268, 635, 1084
AsuII TTCGAA 1 cut(s) 1938
AvaI CYCGRG 1 cut(s) 1502
AvaII GGWCC 2 cut(s) 183, 378
BaeGI GKGCMC 1 cut(s) 1451
BanI GGYRCC 2 cut(s) 264, 609
BanII GRGCYC 4 cut(s) 468, 1089, 1434, 1503
BarI GAAGNNNNNNTAC 1 cut(s) 2022
BauI CACGAG 1 cut(s) 1485
BbrPI CACGTG 1 cut(s) 1137
Bbv12I GWGCWC 4 cut(s) 243, 468, 1434, 1451
BbvI GCAGC 7 cut(s) 469, 800, 1400, 1615, 1787, 1846, 1868
BccI CCATC 6 cut(s) 56, 277, 875, 977, 1204, 1826
BceAI ACGGC 1 cut(s) 1251
BcgI CGANNNNNNTGC 2 cut(s) 1376, 1410
BciT130I CCWGG 5 cut(s) 128, 1068, 1226, 1497, 1901
BclI TGATCA 2 cut(s) 540, 594
BcnI CCSGG 4 cut(s) 262, 376, 400, 1991
BcoDI GTCTC 1 cut(s) 465
BcuI ACTAGT 1 cut(s) 875
BfaI CTAG 9 cut(s) 173, 197, 752, 876, 890, 1361, 1625, 1787, 1845
BfmI CTRYAG 3 cut(s) 178, 404, 1805
BfrI CTTAAG 1 cut(s) 1054
BfuAI ACCTGC 2 cut(s) 171, 696
BglI GCCNNNNNGGC 2 cut(s) 485, 1868
BglII AGATCT 2 cut(s) 661, 1114
BlpI GCTNAGC 1 cut(s) 1049
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 9 cut(s) 128, 262, 376, 400, 1068, 1226, 1497, 1901, 1991
Bme18I GGWCC 2 cut(s) 183, 378
BmeRI GACNNNNNGTC 1 cut(s) 160
BmeT110I CYCGRG 1 cut(s) 1502
BmgT120I GGNCC 2 cut(s) 183, 378
BmiI GGNNCC 4 cut(s) 266, 397, 611, 1230
BmrFI CCNGG 9 cut(s) 128, 262, 376, 400, 1068, 1226, 1497, 1901, 1991
BmsI GCATC 9 cut(s) 372, 742, 749, 777, 1253, 1634, 1684, 1689, 1803
BplI GAGNNNNNCTC 2 cut(s) 1073, 1105
BpmI CTGGAG 3 cut(s) 1315, 1333, 1883
Bpu10I CCTNAGC 1 cut(s) 1398
Bpu1102I GCTNAGC 1 cut(s) 1049
Bpu14I TTCGAA 1 cut(s) 1938
BpuEI CTTGAG 4 cut(s) 635, 758, 1295, 1555
BpuMI CCSGG 4 cut(s) 262, 376, 400, 1991
Bsa29I ATCGAT 2 cut(s) 366, 771
BsaAI YACGTR 1 cut(s) 1137
BsaJI CCNNGG 7 cut(s) 302, 495, 613, 910, 1067, 1224, 1496
BsaWI WCCGGW 1 cut(s) 392
Bsc4I CCNNNNNNNGG 3 cut(s) 399, 475, 1848
Bse1I ACTGG 1 cut(s) 1031
Bse3DI GCAATG 1 cut(s) 1479
BseAI TCCGGA 1 cut(s) 392
BseBI CCWGG 5 cut(s) 128, 1068, 1226, 1497, 1901
BseCI ATCGAT 2 cut(s) 366, 771
BseDI CCNNGG 7 cut(s) 302, 495, 613, 910, 1067, 1224, 1496
BseGI GGATG 6 cut(s) 764, 1215, 1604, 1649, 1707, 1774
BseLI CCNNNNNNNGG 3 cut(s) 399, 475, 1848
BseMI GCAATG 1 cut(s) 1479
BseMII CTCAG 5 cut(s) 117, 1040, 1412, 1739, 2021
BseNI ACTGG 1 cut(s) 1031
BseRI GAGGAG 2 cut(s) 1081, 1292
BseSI GKGCMC 1 cut(s) 1451
BseX3I CGGCCG 1 cut(s) 477
BseXI GCAGC 7 cut(s) 469, 800, 1400, 1615, 1787, 1846, 1868
BseYI CCCAGC 1 cut(s) 1697
Bsh1236I CGCG 2 cut(s) 282, 1956
Bsh1285I CGRYCG 1 cut(s) 480
BshFI GGCC 5 cut(s) 65, 416, 479, 494, 500
BshNI GGYRCC 2 cut(s) 264, 609
BshVI ATCGAT 2 cut(s) 366, 771
BsiEI CGRYCG 1 cut(s) 480
BsiHKAI GWGCWC 4 cut(s) 243, 468, 1434, 1451
BsiHKCI CYCGRG 1 cut(s) 1502
BsiSI CCGG 5 cut(s) 262, 376, 393, 399, 1990
BslFI GGGAC 2 cut(s) 892, 1768
BslI CCNNNNNNNGG 3 cut(s) 399, 475, 1848
BsmAI GTCTC 1 cut(s) 465
BsmFI GGGAC 2 cut(s) 892, 1768
BsmI GAATGC 1 cut(s) 1241
BsnI GGCC 5 cut(s) 65, 416, 479, 494, 500
BsoBI CYCGRG 1 cut(s) 1502
Bsp119I TTCGAA 1 cut(s) 1938
Bsp1286I GDGCHC 6 cut(s) 243, 468, 1089, 1434, 1451, 1503
Bsp13I TCCGGA 1 cut(s) 392
Bsp1407I TGTACA 1 cut(s) 1440
Bsp1720I GCTNAGC 1 cut(s) 1049
Bsp19I CCATGG 1 cut(s) 910
BspANI GGCC 5 cut(s) 65, 416, 479, 494, 500
BspCNI CTCAG 5 cut(s) 116, 1041, 1411, 1738, 2020
BspDI ATCGAT 2 cut(s) 366, 771
BspEI TCCGGA 1 cut(s) 392
BspFNI CGCG 2 cut(s) 282, 1956
BspLI GGNNCC 4 cut(s) 266, 397, 611, 1230
BspMAI CTGCAG 2 cut(s) 182, 1809
BspMI ACCTGC 2 cut(s) 171, 696
BspPI GGATC 3 cut(s) 314, 684, 1699
BspT104I TTCGAA 1 cut(s) 1938
BspT107I GGYRCC 2 cut(s) 264, 609
BspTI CTTAAG 1 cut(s) 1054
BsrBI CCGCTC 1 cut(s) 234
BsrDI GCAATG 1 cut(s) 1479
BsrGI TGTACA 1 cut(s) 1440
BsrI ACTGG 1 cut(s) 1031
BssECI CCNNGG 7 cut(s) 302, 495, 613, 910, 1067, 1224, 1496
BssSI CACGAG 1 cut(s) 1485
BssT1I CCWWGG 1 cut(s) 910
Bst2BI CACGAG 1 cut(s) 1485
Bst2UI CCWGG 5 cut(s) 128, 1068, 1226, 1497, 1901
Bst4CI ACNGT 5 cut(s) 714, 1526, 1585, 2025, 2043
BstAFI CTTAAG 1 cut(s) 1054
BstAPI GCANNNNNTGC 2 cut(s) 1413, 1800
BstAUI TGTACA 1 cut(s) 1440
BstBAI YACGTR 1 cut(s) 1137
BstBI TTCGAA 1 cut(s) 1938
BstC8I GCNNGC 9 cut(s) 343, 645, 1014, 1649, 1792, 1805, 1854, 1873, 1954
BstDEI CTNAG 7 cut(s) 103, 1049, 1205, 1398, 1725, 1733, 2007
BstDSI CCRYGG 1 cut(s) 910
BstF5I GGATG 6 cut(s) 764, 1215, 1604, 1649, 1707, 1774
BstFNI CGCG 2 cut(s) 282, 1956
BstHHI GCGC 1 cut(s) 649
BstMAI GTCTC 1 cut(s) 465
BstMCI CGRYCG 1 cut(s) 480
BstMWI GCNNNNNNNGC 8 cut(s) 485, 491, 820, 1413, 1634, 1800, 1809, 1868
BstNI CCWGG 5 cut(s) 128, 1068, 1226, 1497, 1901
BstNSI RCATGY 2 cut(s) 1411, 1875
BstSCI CCNGG 9 cut(s) 126, 260, 374, 398, 1066, 1224, 1495, 1899, 1989
BstSFI CTRYAG 3 cut(s) 178, 404, 1805
BstSLI GKGCMC 1 cut(s) 1451
BstUI CGCG 2 cut(s) 282, 1956
BstV1I GCAGC 7 cut(s) 469, 800, 1400, 1615, 1787, 1846, 1868
BstX2I RGATCY 3 cut(s) 661, 676, 1114
BstXI CCANNNNNNTGG 1 cut(s) 508
BstYI RGATCY 3 cut(s) 661, 676, 1114
BstZI CGGCCG 1 cut(s) 477
Bsu15I ATCGAT 2 cut(s) 366, 771
BsuRI GGCC 5 cut(s) 65, 416, 479, 494, 500
BsuTUI ATCGAT 2 cut(s) 366, 771
BtgI CCRYGG 1 cut(s) 910
BtsCI GGATG 6 cut(s) 764, 1215, 1604, 1649, 1707, 1774
BtsIMutI CAGTG 1 cut(s) 2015
BveI ACCTGC 2 cut(s) 171, 696
Cac8I GCNNGC 9 cut(s) 343, 645, 1014, 1649, 1792, 1805, 1854, 1873, 1954
CfoI GCGC 1 cut(s) 649
Cfr13I GGNCC 2 cut(s) 183, 378
ClaI ATCGAT 2 cut(s) 366, 771
CseI GACGC 2 cut(s) 271, 323
Csp6I GTAC 3 cut(s) 265, 385, 1441
CspCI CAANNNNNGTGG 2 cut(s) 1620, 1655
CviAII CATG 7 cut(s) 550, 800, 911, 1185, 1218, 1408, 1872
CviQI GTAC 3 cut(s) 265, 385, 1441
DdeI CTNAG 7 cut(s) 103, 1049, 1205, 1398, 1725, 1733, 2007
DriI GACNNNNNGTC 1 cut(s) 160
EaeI YGGCCR 2 cut(s) 477, 492
EagI CGGCCG 1 cut(s) 477
Eam1105I GACNNNNNGTC 1 cut(s) 160
Ecl136II GAGCTC 2 cut(s) 466, 1432
EclXI CGGCCG 1 cut(s) 477
Eco130I CCWWGG 1 cut(s) 910
Eco24I GRGCYC 4 cut(s) 468, 1089, 1434, 1503
Eco47I GGWCC 2 cut(s) 183, 378
Eco52I CGGCCG 1 cut(s) 477
Eco53kI GAGCTC 2 cut(s) 466, 1432
Eco72I CACGTG 1 cut(s) 1137
Eco88I CYCGRG 1 cut(s) 1502
EcoICRI GAGCTC 2 cut(s) 466, 1432
EcoO109I RGGNCCY 1 cut(s) 183
EcoRII CCWGG 5 cut(s) 126, 1066, 1224, 1495, 1899
EcoT14I CCWWGG 1 cut(s) 910
EcoT38I GRGCYC 4 cut(s) 468, 1089, 1434, 1503
ErhI CCWWGG 1 cut(s) 910
FaeI CATG 7 cut(s) 553, 803, 914, 1188, 1221, 1411, 1875
FaqI GGGAC 2 cut(s) 892, 1768
FatI CATG 7 cut(s) 549, 799, 910, 1184, 1217, 1407, 1871
FauI CCCGC 1 cut(s) 287
FbaI TGATCA 2 cut(s) 540, 594
FokI GGATG 6 cut(s) 771, 1222, 1611, 1656, 1714, 1781
FriOI GRGCYC 4 cut(s) 468, 1089, 1434, 1503
FspBI CTAG 9 cut(s) 173, 197, 752, 876, 890, 1361, 1625, 1787, 1845
GlaI GCGC 1 cut(s) 648
GsaI CCCAGC 1 cut(s) 1701
GsuI CTGGAG 3 cut(s) 1315, 1333, 1883
HaeIII GGCC 5 cut(s) 65, 416, 479, 494, 500
HapII CCGG 5 cut(s) 262, 376, 393, 399, 1990
HgaI GACGC 2 cut(s) 271, 323
HhaI GCGC 1 cut(s) 649
Hin1II CATG 7 cut(s) 553, 803, 914, 1188, 1221, 1411, 1875
Hin6I GCGC 1 cut(s) 647
HinP1I GCGC 1 cut(s) 647
HincII GTYRAC 1 cut(s) 1152
HindII GTYRAC 1 cut(s) 1152
HindIII AAGCTT 1 cut(s) 821
HinfI GANTC 5 cut(s) 200, 473, 925, 1214, 1463
HpaI GTTAAC 1 cut(s) 1152
HpaII CCGG 5 cut(s) 262, 376, 393, 399, 1990
HphI GGTGA 4 cut(s) 130, 268, 635, 1084
Hpy166II GTNNAC 4 cut(s) 710, 1152, 1449, 1547
Hpy188I TCNGA 8 cut(s) 106, 238, 306, 470, 843, 1342, 1462, 1728
Hpy188III TCNNGA 9 cut(s) 52, 256, 393, 737, 752, 890, 1274, 1332, 1504
Hpy8I GTNNAC 4 cut(s) 710, 1152, 1449, 1547
Hpy99I CGWCG 3 cut(s) 287, 463, 718
HpyAV CCTTC 8 cut(s) 50, 175, 196, 522, 749, 1307, 1825, 1918
HpyCH4III ACNGT 5 cut(s) 714, 1526, 1585, 2025, 2043
HpyCH4IV ACGT 1 cut(s) 1136
HpyF10VI GCNNNNNNNGC 8 cut(s) 485, 491, 820, 1413, 1634, 1800, 1809, 1868
HpyF3I CTNAG 7 cut(s) 103, 1049, 1205, 1398, 1725, 1733, 2007
HpySE526I ACGT 1 cut(s) 1136
Hsp92II CATG 7 cut(s) 553, 803, 914, 1188, 1221, 1411, 1875
HspAI GCGC 1 cut(s) 647
Kpn2I TCCGGA 1 cut(s) 392
KpnI GGTACC 1 cut(s) 268
Ksp22I TGATCA 2 cut(s) 540, 594
KspAI GTTAAC 1 cut(s) 1152
LmnI GCTCC 6 cut(s) 239, 395, 463, 471, 1045, 1902
Lsp1109I GCAGC 7 cut(s) 469, 800, 1400, 1615, 1787, 1846, 1868
LweI GCATC 9 cut(s) 372, 742, 749, 777, 1253, 1634, 1684, 1689, 1803
MaeI CTAG 9 cut(s) 173, 197, 752, 876, 890, 1361, 1625, 1787, 1845
MaeII ACGT 1 cut(s) 1136
MaeIII GTNAC 7 cut(s) 274, 623, 726, 922, 1072, 1762, 1920
MbiI CCGCTC 1 cut(s) 234
MboII GAAGA 7 cut(s) 27, 82, 109, 595, 656, 712, 2042
MfeI CAATTG 3 cut(s) 150, 1632, 1652
MflI RGATCY 3 cut(s) 661, 676, 1114
MhlI GDGCHC 6 cut(s) 243, 468, 1089, 1434, 1451, 1503
MlyI GAGTC 3 cut(s) 467, 919, 1223
MmeI TCCRAC 3 cut(s) 375, 1994, 2007
MroI TCCGGA 1 cut(s) 392
MseI TTAA 8 cut(s) 602, 1040, 1055, 1151, 1355, 1512, 1743, 1814
MslI CAYNNNNRTG 3 cut(s) 548, 554, 1183
MspA1I CMGCKG 3 cut(s) 482, 1800, 1859
MspCI CTTAAG 1 cut(s) 1054
MspI CCGG 5 cut(s) 262, 376, 393, 399, 1990
MspR9I CCNGG 9 cut(s) 128, 262, 376, 400, 1068, 1226, 1497, 1901, 1991
MunI CAATTG 3 cut(s) 150, 1632, 1652
Mva1269I GAATGC 1 cut(s) 1241
MvaI CCWGG 5 cut(s) 128, 1068, 1226, 1497, 1901
MvnI CGCG 2 cut(s) 282, 1956
MwoI GCNNNNNNNGC 8 cut(s) 485, 491, 820, 1413, 1634, 1800, 1809, 1868
NciI CCSGG 4 cut(s) 262, 376, 400, 1991
NcoI CCATGG 1 cut(s) 910
NlaIII CATG 7 cut(s) 553, 803, 914, 1188, 1221, 1411, 1875
NlaIV GGNNCC 4 cut(s) 266, 397, 611, 1230
NmeAIII GCCGAG 2 cut(s) 455, 520
NmuCI GTSAC 4 cut(s) 274, 623, 922, 1072
NspI RCATGY 2 cut(s) 1411, 1875
NspV TTCGAA 1 cut(s) 1938
PaeI GCATGC 1 cut(s) 1875
PaeR7I CTCGAG 1 cut(s) 1502
PctI GAATGC 1 cut(s) 1241
PfeI GAWTC 2 cut(s) 200, 1463
PfoI TCCNGGA 1 cut(s) 126
PleI GAGTC 3 cut(s) 467, 919, 1222
PmaCI CACGTG 1 cut(s) 1137
PmlI CACGTG 1 cut(s) 1137
PpsI GAGTC 3 cut(s) 467, 919, 1222
Ppu21I YACGTR 1 cut(s) 1137
PpuMI RGGWCCY 1 cut(s) 183
PshBI ATTAAT 2 cut(s) 1512, 1743
Psp124BI GAGCTC 2 cut(s) 468, 1434
Psp5II RGGWCCY 1 cut(s) 183
Psp6I CCWGG 5 cut(s) 126, 1066, 1224, 1495, 1899
PspCI CACGTG 1 cut(s) 1137
PspFI CCCAGC 1 cut(s) 1697
PspGI CCWGG 5 cut(s) 126, 1066, 1224, 1495, 1899
PspN4I GGNNCC 4 cut(s) 266, 397, 611, 1230
PspPI GGNCC 2 cut(s) 183, 378
PspPPI RGGWCCY 1 cut(s) 183
PstI CTGCAG 2 cut(s) 182, 1809
PsuI RGATCY 3 cut(s) 661, 676, 1114
PvuII CAGCTG 2 cut(s) 1800, 1859
RsaI GTAC 3 cut(s) 266, 386, 1442
RsaNI GTAC 3 cut(s) 265, 385, 1441
RseI CAYNNNNRTG 3 cut(s) 548, 554, 1183
SacI GAGCTC 2 cut(s) 468, 1434
SaqAI TTAA 8 cut(s) 602, 1040, 1055, 1151, 1355, 1512, 1743, 1814
Sau96I GGNCC 2 cut(s) 183, 378
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 3 cut(s) 467, 919, 1223
ScrFI CCNGG 9 cut(s) 128, 262, 376, 400, 1068, 1226, 1497, 1901, 1991
SduI GDGCHC 6 cut(s) 243, 468, 1089, 1434, 1451, 1503
SfaNI GCATC 9 cut(s) 372, 742, 749, 777, 1253, 1634, 1684, 1689, 1803
SfcI CTRYAG 3 cut(s) 178, 404, 1805
Sfr274I CTCGAG 1 cut(s) 1502
SfuI TTCGAA 1 cut(s) 1938
SinI GGWCC 2 cut(s) 183, 378
SlaI CTCGAG 1 cut(s) 1502
SmiMI CAYNNNNRTG 3 cut(s) 548, 554, 1183
SmlI CTYRAG 6 cut(s) 650, 737, 1054, 1274, 1502, 1570
SmoI CTYRAG 6 cut(s) 650, 737, 1054, 1274, 1502, 1570
SpeI ACTAGT 1 cut(s) 875
SphI GCATGC 1 cut(s) 1875
SspI AATATT 1 cut(s) 1687
SspMI CTAG 9 cut(s) 173, 197, 752, 876, 890, 1361, 1625, 1787, 1845
SstI GAGCTC 2 cut(s) 468, 1434
StyD4I CCNGG 9 cut(s) 126, 260, 374, 398, 1066, 1224, 1495, 1899, 1989
StyI CCWWGG 1 cut(s) 910
TaaI ACNGT 5 cut(s) 714, 1526, 1585, 2025, 2043
TaiI ACGT 1 cut(s) 1139
TatI WGTACW 2 cut(s) 384, 1440
TauI GCSGC 3 cut(s) 216, 482, 488
TfiI GAWTC 2 cut(s) 200, 1463
Tru1I TTAA 8 cut(s) 602, 1040, 1055, 1151, 1355, 1512, 1743, 1814
Tru9I TTAA 8 cut(s) 602, 1040, 1055, 1151, 1355, 1512, 1743, 1814
TscAI CASTG 1 cut(s) 2015
TseFI GTSAC 4 cut(s) 274, 623, 922, 1072
TseI GCWGC 7 cut(s) 482, 788, 1413, 1628, 1800, 1856, 1859
Tsp45I GTSAC 4 cut(s) 274, 623, 922, 1072
TspDTI ATGAA 5 cut(s) 109, 123, 602, 1314, 1326
TspGWI ACGGA 3 cut(s) 476, 560, 1781
TspRI CASTG 1 cut(s) 2015
Vha464I CTTAAG 1 cut(s) 1054
VneI GTGCAC 1 cut(s) 1447
VpaK11BI GGWCC 2 cut(s) 183, 378
VspI ATTAAT 2 cut(s) 1512, 1743
XapI RAATTY 3 cut(s) 1365, 1455, 1982
XbaI TCTAGA 2 cut(s) 751, 889
XceI RCATGY 2 cut(s) 1411, 1875
XhoI CTCGAG 1 cut(s) 1502
XspI CTAG 9 cut(s) 173, 197, 752, 876, 890, 1361, 1625, 1787, 1845
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.