Belongs to the chalcone isomerase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53520 |
| fragaria_vesca | FvH4_3g17350 |
| malus_domestica | MD03G1252100.v1.1 MD11G1273600.v1.1 |
| prunus_persica | Prupe.4G153500_v2.0.a1 |
| pyrus_communis | pycom03g20010 pycom11g24130 |
| rosa_chinensis | RchiOBHm_Chr5g0028871 |
| rosa_laevigata | RLG00000033121 |
| rosa_multiflora | Rmu_sc0000638.1_g000037 Rmu_sc0005178.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00051010 |
| rosa_rugosa | Rorug05G0111100 Rorug05G0111100 |
| rosa_samantha | Rh5AG203400 Rh5BG201500 Rh5CG222500 Rh5DG205100 |
| rosa_wichuraiana | Rw5G018400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 377, 606, 622, 680 |
| AclWI | GGATC | 2 cut(s) | 449, 462 |
| AcoI | YGGCCR | 1 cut(s) | 677 |
| AcsI | RAATTY | 3 cut(s) | 62, 102, 617 |
| AcuI | CTGAAG | 2 cut(s) | 33, 207 |
| AfaI | GTAC | 1 cut(s) | 628 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 86, 87, 636, 652 |
| AgsI | TTSAA | 6 cut(s) | 8, 108, 275, 415, 482, 556 |
| AjnI | CCWGG | 2 cut(s) | 292, 419 |
| AluBI | AGCT | 5 cut(s) | 11, 182, 288, 437, 471 |
| AluI | AGCT | 5 cut(s) | 11, 182, 288, 437, 471 |
| Alw21I | GWGCWC | 2 cut(s) | 184, 302 |
| Alw26I | GTCTC | 1 cut(s) | 786 |
| AlwI | GGATC | 2 cut(s) | 449, 462 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 440 |
| Ama87I | CYCGRG | 1 cut(s) | 301 |
| AoxI | GGCC | 1 cut(s) | 677 |
| ApeKI | GCWGC | 2 cut(s) | 374, 437 |
| ApoI | RAATTY | 3 cut(s) | 62, 102, 617 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 539 |
| AsuHPI | GGTGA | 1 cut(s) | 576 |
| AsuII | TTCGAA | 1 cut(s) | 633 |
| AvaI | CYCGRG | 1 cut(s) | 301 |
| BamHI | GGATCC | 1 cut(s) | 454 |
| BanII | GRGCYC | 1 cut(s) | 184 |
| Bbv12I | GWGCWC | 2 cut(s) | 184, 302 |
| BbvI | GCAGC | 2 cut(s) | 361, 424 |
| BccI | CCATC | 5 cut(s) | 144, 407, 466, 524, 572 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 613, 647 |
| BciT130I | CCWGG | 2 cut(s) | 294, 421 |
| BciVI | GTATCC | 1 cut(s) | 323 |
| BcoDI | GTCTC | 1 cut(s) | 786 |
| BfaI | CTAG | 1 cut(s) | 729 |
| BfuI | GTATCC | 1 cut(s) | 323 |
| BisI | GCNGC | 3 cut(s) | 375, 438, 680 |
| BlsI | GCNGC | 3 cut(s) | 376, 439, 681 |
| Bme1390I | CCNGG | 2 cut(s) | 294, 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 301 |
| BmiI | GGNNCC | 2 cut(s) | 252, 456 |
| BmrFI | CCNGG | 2 cut(s) | 294, 421 |
| BmsI | GCATC | 2 cut(s) | 550, 727 |
| BpmI | CTGGAG | 3 cut(s) | 12, 23, 783 |
| Bpu14I | TTCGAA | 1 cut(s) | 633 |
| BsaAI | YACGTR | 1 cut(s) | 388 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 86, 87, 636, 652 |
| Bse1I | ACTGG | 4 cut(s) | 40, 195, 331, 800 |
| Bse3DI | GCAATG | 2 cut(s) | 32, 314 |
| BseBI | CCWGG | 2 cut(s) | 294, 421 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseGI | GGATG | 2 cut(s) | 458, 742 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 86, 87, 636, 652 |
| BseMI | GCAATG | 2 cut(s) | 32, 314 |
| BseMII | CTCAG | 2 cut(s) | 197, 432 |
| BseNI | ACTGG | 4 cut(s) | 40, 195, 331, 800 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 2 cut(s) | 361, 424 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 679 |
| BsiHKAI | GWGCWC | 2 cut(s) | 184, 302 |
| BsiHKCI | CYCGRG | 1 cut(s) | 301 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 86, 87, 636, 652 |
| BsmAI | GTCTC | 1 cut(s) | 786 |
| BsmI | GAATGC | 2 cut(s) | 421, 553 |
| BsnI | GGCC | 1 cut(s) | 679 |
| BsoBI | CYCGRG | 1 cut(s) | 301 |
| Bsp119I | TTCGAA | 1 cut(s) | 633 |
| Bsp1286I | GDGCHC | 2 cut(s) | 184, 302 |
| Bsp143I | GATC | 2 cut(s) | 431, 454 |
| BspACI | CCGC | 4 cut(s) | 377, 606, 622, 680 |
| BspANI | GGCC | 1 cut(s) | 679 |
| BspCNI | CTCAG | 2 cut(s) | 196, 433 |
| BspLI | GGNNCC | 2 cut(s) | 252, 456 |
| BspPI | GGATC | 2 cut(s) | 449, 462 |
| BspT104I | TTCGAA | 1 cut(s) | 633 |
| BsrDI | GCAATG | 2 cut(s) | 32, 314 |
| BsrI | ACTGG | 4 cut(s) | 40, 195, 331, 800 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 2 cut(s) | 431, 454 |
| Bst2UI | CCWGG | 2 cut(s) | 294, 421 |
| Bst4CI | ACNGT | 1 cut(s) | 612 |
| BstBAI | YACGTR | 1 cut(s) | 388 |
| BstBI | TTCGAA | 1 cut(s) | 633 |
| BstC8I | GCNNGC | 2 cut(s) | 255, 290 |
| BstDEI | CTNAG | 2 cut(s) | 183, 441 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 650 |
| BstF5I | GGATG | 2 cut(s) | 458, 742 |
| BstKTI | GATC | 2 cut(s) | 434, 457 |
| BstMAI | GTCTC | 1 cut(s) | 786 |
| BstMBI | GATC | 2 cut(s) | 431, 454 |
| BstNI | CCWGG | 2 cut(s) | 294, 421 |
| BstSCI | CCNGG | 2 cut(s) | 292, 419 |
| BstSNI | TACGTA | 1 cut(s) | 388 |
| BstV1I | GCAGC | 2 cut(s) | 361, 424 |
| BstX2I | RGATCY | 1 cut(s) | 454 |
| BstYI | RGATCY | 1 cut(s) | 454 |
| BsuI | GTATCC | 1 cut(s) | 323 |
| BsuRI | GGCC | 1 cut(s) | 679 |
| BtsCI | GGATG | 2 cut(s) | 458, 742 |
| BtsIMutI | CAGTG | 1 cut(s) | 608 |
| Cac8I | GCNNGC | 2 cut(s) | 255, 290 |
| CaiI | CAGNNNCTG | 1 cut(s) | 440 |
| Csp6I | GTAC | 1 cut(s) | 627 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 577, 612 |
| CviJI | RGCY | 8 cut(s) | 11, 182, 253, 288, 437, 471, 679, 721 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 182, 253, 288, 437, 471, 679, 721 |
| CviQI | GTAC | 1 cut(s) | 627 |
| DdeI | CTNAG | 2 cut(s) | 183, 441 |
| DpnI | GATC | 2 cut(s) | 433, 456 |
| DpnII | GATC | 2 cut(s) | 431, 454 |
| DraI | TTTAAA | 1 cut(s) | 207 |
| EaeI | YGGCCR | 1 cut(s) | 677 |
| Ecl136II | GAGCTC | 1 cut(s) | 182 |
| Eco105I | TACGTA | 1 cut(s) | 388 |
| Eco24I | GRGCYC | 1 cut(s) | 184 |
| Eco53kI | GAGCTC | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 2 cut(s) | 33, 207 |
| Eco88I | CYCGRG | 1 cut(s) | 301 |
| EcoICRI | GAGCTC | 1 cut(s) | 182 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 650 |
| EcoRII | CCWGG | 2 cut(s) | 292, 419 |
| EcoT38I | GRGCYC | 1 cut(s) | 184 |
| FaiI | YATR | 5 cut(s) | 245, 370, 372, 385, 665 |
| FauI | CCCGC | 1 cut(s) | 370 |
| Fnu4HI | GCNGC | 3 cut(s) | 375, 438, 680 |
| FokI | GGATG | 2 cut(s) | 445, 749 |
| FriOI | GRGCYC | 1 cut(s) | 184 |
| Fsp4HI | GCNGC | 3 cut(s) | 375, 438, 680 |
| FspBI | CTAG | 1 cut(s) | 729 |
| GluI | GCNGC | 3 cut(s) | 375, 438, 680 |
| GsuI | CTGGAG | 3 cut(s) | 12, 23, 783 |
| HaeIII | GGCC | 1 cut(s) | 679 |
| HinfI | GANTC | 4 cut(s) | 445, 576, 602, 749 |
| HphI | GGTGA | 1 cut(s) | 576 |
| Hpy188I | TCNGA | 4 cut(s) | 96, 186, 450, 754 |
| Hpy188III | TCNNGA | 1 cut(s) | 544 |
| HpyAV | CCTTC | 2 cut(s) | 629, 640 |
| HpyCH4III | ACNGT | 1 cut(s) | 612 |
| HpyCH4IV | ACGT | 2 cut(s) | 387, 759 |
| HpyCH4V | TGCA | 3 cut(s) | 24, 236, 350 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 441 |
| HpySE526I | ACGT | 2 cut(s) | 387, 759 |
| Kzo9I | GATC | 2 cut(s) | 431, 454 |
| LmnI | GCTCC | 4 cut(s) | 42, 179, 250, 476 |
| Lsp1109I | GCAGC | 2 cut(s) | 361, 424 |
| LweI | GCATC | 2 cut(s) | 550, 727 |
| MaeI | CTAG | 1 cut(s) | 729 |
| MaeII | ACGT | 2 cut(s) | 387, 759 |
| MaeIII | GTNAC | 1 cut(s) | 42 |
| MalI | GATC | 2 cut(s) | 433, 456 |
| MboI | GATC | 2 cut(s) | 431, 454 |
| MboII | GAAGA | 2 cut(s) | 213, 441 |
| MflI | RGATCY | 1 cut(s) | 454 |
| MhlI | GDGCHC | 2 cut(s) | 184, 302 |
| MluCI | AATT | 6 cut(s) | 18, 62, 84, 102, 351, 617 |
| MlyI | GAGTC | 1 cut(s) | 611 |
| MmeI | TCCRAC | 1 cut(s) | 208 |
| MnlI | CCTC | 3 cut(s) | 226, 241, 444 |
| MroXI | GAANNNNTTC | 1 cut(s) | 539 |
| MseI | TTAA | 6 cut(s) | 74, 206, 363, 404, 648, 814 |
| MspA1I | CMGCKG | 1 cut(s) | 437 |
| MspR9I | CCNGG | 2 cut(s) | 294, 421 |
| Mva1269I | GAATGC | 2 cut(s) | 421, 553 |
| MvaI | CCWGG | 2 cut(s) | 294, 421 |
| NdeII | GATC | 2 cut(s) | 431, 454 |
| NlaIV | GGNNCC | 2 cut(s) | 252, 456 |
| NspV | TTCGAA | 1 cut(s) | 633 |
| PaeR7I | CTCGAG | 1 cut(s) | 301 |
| PctI | GAATGC | 2 cut(s) | 421, 553 |
| PdmI | GAANNNNTTC | 1 cut(s) | 539 |
| PfeI | GAWTC | 3 cut(s) | 445, 576, 749 |
| PkrI | GCNGC | 3 cut(s) | 376, 439, 681 |
| PleI | GAGTC | 1 cut(s) | 610 |
| PpsI | GAGTC | 1 cut(s) | 610 |
| Ppu21I | YACGTR | 1 cut(s) | 388 |
| Psp124BI | GAGCTC | 1 cut(s) | 184 |
| Psp6I | CCWGG | 2 cut(s) | 292, 419 |
| PspGI | CCWGG | 2 cut(s) | 292, 419 |
| PspN4I | GGNNCC | 2 cut(s) | 252, 456 |
| PspXI | VCTCGAGB | 1 cut(s) | 301 |
| PstNI | CAGNNNCTG | 1 cut(s) | 440 |
| PsuI | RGATCY | 1 cut(s) | 454 |
| PvuII | CAGCTG | 1 cut(s) | 437 |
| RsaI | GTAC | 1 cut(s) | 628 |
| RsaNI | GTAC | 1 cut(s) | 627 |
| SacI | GAGCTC | 1 cut(s) | 184 |
| SaqAI | TTAA | 6 cut(s) | 74, 206, 363, 404, 648, 814 |
| SatI | GCNGC | 3 cut(s) | 375, 438, 680 |
| Sau3AI | GATC | 2 cut(s) | 431, 454 |
| SchI | GAGTC | 1 cut(s) | 611 |
| ScrFI | CCNGG | 2 cut(s) | 294, 421 |
| SduI | GDGCHC | 2 cut(s) | 184, 302 |
| SetI | ASST | 8 cut(s) | 13, 184, 290, 390, 439, 473, 632, 762 |
| SfaNI | GCATC | 2 cut(s) | 550, 727 |
| Sfr274I | CTCGAG | 1 cut(s) | 301 |
| SfuI | TTCGAA | 1 cut(s) | 633 |
| SlaI | CTCGAG | 1 cut(s) | 301 |
| SmlI | CTYRAG | 1 cut(s) | 301 |
| SmoI | CTYRAG | 1 cut(s) | 301 |
| SnaBI | TACGTA | 1 cut(s) | 388 |
| Sse9I | AATT | 6 cut(s) | 18, 62, 84, 102, 351, 617 |
| SsiI | CCGC | 4 cut(s) | 377, 606, 622, 680 |
| SspMI | CTAG | 1 cut(s) | 729 |
| SstI | GAGCTC | 1 cut(s) | 184 |
| StyD4I | CCNGG | 2 cut(s) | 292, 419 |
| TaaI | ACNGT | 1 cut(s) | 612 |
| TaiI | ACGT | 2 cut(s) | 390, 762 |
| TaqI | TCGA | 2 cut(s) | 302, 633 |
| TasI | AATT | 6 cut(s) | 18, 62, 84, 102, 351, 617 |
| TauI | GCSGC | 1 cut(s) | 682 |
| TfiI | GAWTC | 3 cut(s) | 445, 576, 749 |
| Tru1I | TTAA | 6 cut(s) | 74, 206, 363, 404, 648, 814 |
| Tru9I | TTAA | 6 cut(s) | 74, 206, 363, 404, 648, 814 |
| TscAI | CASTG | 1 cut(s) | 615 |
| TseI | GCWGC | 2 cut(s) | 374, 437 |
| TspDTI | ATGAA | 2 cut(s) | 297, 652 |
| TspGWI | ACGGA | 1 cut(s) | 714 |
| TspRI | CASTG | 1 cut(s) | 615 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 650 |
| XapI | RAATTY | 3 cut(s) | 62, 102, 617 |
| XhoI | CTCGAG | 1 cut(s) | 301 |
| XmnI | GAANNNNTTC | 1 cut(s) | 539 |
| XspI | CTAG | 1 cut(s) | 729 |