Rorug05G0111100

Belongs to the chalcone isomerase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
9910900 .. 9918563
7664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0111100.1

Sequence Viewer

Length: 2859 bp
ATGTCTATGGACTCTGGTAAAAGCGTCATTTTAAGCTTTCCATCACAAACAAGTTCCAGCTTAAACAGTACGTCTGGGCAATGTTCACGTATTCCAACTGCAATTAGGAAATCATGGTCCACACTGACAACTTCAGTTAAGAAAGCATGGTTAGCAGTTACATTTCCACTCAGAGAAATATGGTCACCATTGGCATGTCATGTTGGAGGGATAGTTGGCGTGAGAACTATTGAGGATTTCAGAGAACTTTTTCAAGATTTGATGCCATGTTTGAGAGGAGTAGTTCTCCATCTGATACTATGTTTGACATTGACCATTCTTCTGCCCATCAGTTTACTGTGGAATCTGATATTGAAGGGGAGATTTACACTAACATGGGAAAGGGTACTTGCAATATCATGCATTGCAATGTCAGTCGATCCCTTGTTCTTTTACATTCCAGTTGTTGATGAGAACAGCAAGTGTCTTGGAATGGACAGAACATTAAGCAATACAGTTCTTGTGTTGCGATCACTTACGGATCTCACTTTTACACTCCATATTATTGCTCTAATTCATGATCGGATCGACATCCCCTCAAACTCTGACTCTGACTCTGACCCAGAGAAGCATATTTATGAACGCATACTTAGGAGGATGAAGTGGTTGTCTAAAGATATCATAATTGACGTTATTGCTATACTTCCCATCCCACAGGTCACAATAATAATAGTCCTTTTCAGAATGAGAGCGTCGGGGTATCTATATGAAATAGTCATTGGCAACATCTGTCTTCCTTTACAATTTTTTGCAAGGGGTTACCAAATCTATCACTTCCATAAGCAATTTCAGATGCTTGGGAAATGGGCTAAAAGTGTATTCTATTTTCTCATGTACATCATGGCTGGTCATGTTTTGGGAGCATATTGGTACTTTTTGTCCATTCAAAGAGAGATATCGTGTTGGCATCAGGCATGTAGAAATACTAAAGGGTGTAGAGCCACTAATTATTGCGAGGACACCAGTTCTTCAGCAGATATTACACTCCTAAATGATTTTTGTCCTATAAATCCATCCAATGCAACACTATTTGATTTTGGAATATTCCTTGATGCCCTTCAATCTGGTAATACAGGATCGATAAGTTTCACAACAAAGTTTTTTTATACTTTCTGGTGGGGCATTAGAAACCTGAGTAATTTTGGAAGTGACTTGGAAACAAGTAACTATGTGTGGGAAAACTGCTTTACAATTTTTATTTCTCTTGTTGGCTTGCTTCTGTTTCTATATCTCATGGGAAATGTGCAGACATATATTCTTTGGGAATCTACAAAAGCATTGGAGGTTCAGGAGGAGAAAGTTAAGGCGAAATATGAAGATCTACATTCGTGGATGTTAGATAATGCTATCCCCGGAAAAATCAAGATAGAAGTGGTGAAAATCATAAAGTATCAGAAAATATTTGAAAGAAACTACGCCACTGGTGTAGATGTTGATGTGGACTTAGTTTTTGTATTCAATGCTATCACTGTGAATGGCAATCAACCCGTGGCAAGTTATTTGAAGGAGCATTTCTGCGCAAATGCCCTCATGAAAGTATCCATCCTTCAAGACGTGGGAGAAGATGAATTCAACTTGGTATTAAAGTTTTCCATCCCGGTGATCTACGAGGAGAATAGCTACGTAGTTCGAGCAGGAGAGCCGGATGACAAAATGCTCATCATCACACAAGGCGTGCTAATTGTATATGTGGACAACACCGCAGCAGGCTCTTCATCAATTATCATCCCCAAGTCACGTTTTGAGAAAGGTGAAGTTTATGGAGAAGAGCTTTTGAACGGCCGTATTCCTATATCGACCCGAGATGTCAAATGCCAAACAAAAGTAGAAGCCTTCGCTCTCACAAGTCGTGGGTTGAAATTTGTAGTAACCATGCTGCGGCAGACACGTACGACTTCAACATTGTTCTATGATCCAGAACTAGTAAACAAGGCATATAGAGAGTTAACAACGACAAGATCGGAGAAGTTTCTACAGCAAAAGATGAAGATGGATTGCAAGGAGAAAGATATACTTGAGTGGCTGTCAAGAAATGGTGTTCACCGGGATCAGCAGACATCAGTTATGAAACACATAAAGGCTAATAGTGTACTGGAAGAAAACTTAGATGCTGAGGTGGATGTGAGGTATCTATTCTCGATTCGTCTTCCCTGGCATATCGAATATGAAATAAAGAAGGATCTCTGCATGAGGACTCTCCATAAAGTACCTGTACTTGATGGTGTTGATGAAGATGTGTTGTACCGCATCTGTATGTCTCTCGATCCAGTGGTCCTCCCGAAGAATAACTGTGTCGTTAAACCAGGTGGCCAAATTGATCGGATGCTCATCATTGTAGAAGGCGAAATTACTTTGACTGAGCAGACTTTCCATGTTTTAAGTAGATTAAGAAAGAGAGGCAACATTGAAAGAATACTGAAGAAAGGCGATTTCTTTGGGGAGGAACTTCTGACTTGGGCATTCCCTGACGTCTCTATTTCCAAATATAAACCTGATATCTCGAGAAAATATGTTGATTGTTGTGCAAAAGTAGAAGCCTTTGCTCTCACGAAGGAGGGTGTGGAAAGTGTAGTCGCCTACTACCGGGAGGGAACCAACATTTTTGAGGAGTTGGAGAATGGTAAAGATGGTGTGGCTGATACTAATGGTACATCCACATCCCCAACTATTGAGCAGAGACTTGATCAGCTTATTCAGCTCCAGGTTGACATGCTTCAACAGCATCGTGATGAAATGGCTAATCAGGGACGGAGATTGGATCAGATAGCTGCATTCCTAGCCAGATTGGGATATCCAGACACACCTCCTCCTGCAGCTTGA

Protein Analysis

952

Amino Acids

108.65

Weight (kDa)

6.25

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012368)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2511
Acc16I TGCGCA 1 cut(s) 1558
AciI CCGC 3 cut(s) 1740, 1918, 2284
AclWI GGATC 9 cut(s) 413, 528, 572, 1123, 1946, 2094, 2226, 2297, 2805
AcoI YGGCCR 2 cut(s) 1819, 2347
AcsI RAATTY 2 cut(s) 1607, 1898
AcuI CTGAAG 3 cut(s) 117, 993, 2477
AcyI GRCGYC 1 cut(s) 2508
AfiI CCNNNNNNNGG 2 cut(s) 1917, 2622
AflIII ACRYGT 1 cut(s) 1925
AhlI ACTAGT 1 cut(s) 1960
AjiI CACGTC 1 cut(s) 1594
AjnI CCWGG 3 cut(s) 2189, 2341, 2739
AjuI GAANNNNNNNTTGG 2 cut(s) 741, 773
AluBI AGCT 8 cut(s) 36, 60, 1659, 1810, 2728, 2737, 2807, 2855
AluI AGCT 8 cut(s) 36, 60, 1659, 1810, 2728, 2737, 2807, 2855
Alw26I GTCTC 3 cut(s) 2301, 2515, 2710
AlwI GGATC 9 cut(s) 413, 528, 572, 1123, 1946, 2094, 2226, 2297, 2805
Ama87I CYCGRG 2 cut(s) 1839, 2539
AoxI GGCC 2 cut(s) 1819, 2347
ApeKI GCWGC 4 cut(s) 1742, 1915, 2807, 2852
ApoI RAATTY 2 cut(s) 1607, 1898
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
Asp700I GAANNNNTTC 1 cut(s) 249
AspLEI GCGC 1 cut(s) 1559
AspS9I GGNCC 2 cut(s) 117, 2311
AsuC2I CCSGG 4 cut(s) 1392, 1637, 2084, 2624
AsuHPI GGTGA 5 cut(s) 177, 1426, 1651, 1802, 2072
AvaI CYCGRG 2 cut(s) 1839, 2539
AvaII GGWCC 2 cut(s) 117, 2311
BalI TGGCCA 1 cut(s) 2349
BarI GAAGNNNNNNTAC 2 cut(s) 1569, 1601
BbsI GAAGAC 2 cut(s) 764, 2177
BbvCI CCTCAGC 1 cut(s) 2151
BbvI GCAGC 3 cut(s) 1754, 1902, 2794
BceAI ACGGC 2 cut(s) 1806, 1834
BciT130I CCWGG 3 cut(s) 2191, 2343, 2741
BciVI GTATCC 1 cut(s) 1588
BclI TGATCA 1 cut(s) 2722
BcnI CCSGG 4 cut(s) 1392, 1637, 2084, 2624
BcoDI GTCTC 3 cut(s) 2301, 2515, 2710
BcuI ACTAGT 1 cut(s) 1960
BfaI CTAG 2 cut(s) 1961, 2816
BfmI CTRYAG 2 cut(s) 2012, 2850
BfuI GTATCC 1 cut(s) 1588
BglII AGATCT 1 cut(s) 1357
BisI GCNGC 5 cut(s) 1743, 1916, 1919, 2808, 2853
BlsI GCNGC 5 cut(s) 1744, 1917, 1920, 2809, 2854
Bme1390I CCNGG 7 cut(s) 1392, 1637, 2084, 2191, 2343, 2624, 2741
Bme18I GGWCC 2 cut(s) 117, 2311
BmeT110I CYCGRG 2 cut(s) 1839, 2539
BmgBI CACGTC 1 cut(s) 1594
BmgT120I GGNCC 2 cut(s) 117, 2311
BmiI GGNNCC 1 cut(s) 2632
BmrFI CCNGG 7 cut(s) 1392, 1637, 2084, 2191, 2343, 2624, 2741
BmsI GCATC 8 cut(s) 252, 822, 955, 1081, 2137, 2295, 2352, 2770
BpiI GAAGAC 2 cut(s) 764, 2177
BplI GAGNNNNNCTC 2 cut(s) 270, 302
BpmI CTGGAG 1 cut(s) 2723
Bpu10I CCTNAGC 1 cut(s) 2151
BpuEI CTTGAG 1 cut(s) 2075
BpuMI CCSGG 4 cut(s) 1392, 1637, 2084, 2624
Bsa29I ATCGAT 1 cut(s) 1118
BsaAI YACGTR 3 cut(s) 89, 1663, 1928
BsaBI GATNNNNATC 2 cut(s) 569, 2366
BsaHI GRCGYC 1 cut(s) 2508
BsaJI CCNNGG 3 cut(s) 1390, 1527, 2189
BsaXI ACNNNNNCTCC 3 cut(s) 198, 228, 2830
Bsc4I CCNNNNNNNGG 2 cut(s) 1917, 2622
Bse1I ACTGG 5 cut(s) 440, 1002, 1465, 2136, 2306
Bse3DI GCAATG 3 cut(s) 86, 402, 414
Bse8I GATNNNNATC 2 cut(s) 569, 2366
BseBI CCWGG 3 cut(s) 2191, 2343, 2741
BseCI ATCGAT 1 cut(s) 1118
BseDI CCNNGG 3 cut(s) 1390, 1527, 2189
BseJI GATNNNNATC 2 cut(s) 569, 2366
BseLI CCNNNNNNNGG 2 cut(s) 1917, 2622
BseMI GCAATG 3 cut(s) 86, 402, 414
BseMII CTCAG 4 cut(s) 184, 1163, 2142, 2388
BseNI ACTGG 5 cut(s) 440, 1002, 1465, 2136, 2306
BseRI GAGGAG 5 cut(s) 291, 1346, 1664, 2660, 2835
BseX3I CGGCCG 1 cut(s) 1819
BseXI GCAGC 3 cut(s) 1754, 1902, 2794
BsgI GTGCAG 1 cut(s) 1304
Bsh1285I CGRYCG 1 cut(s) 1822
BshFI GGCC 2 cut(s) 1821, 2349
BshVI ATCGAT 1 cut(s) 1118
BsiEI CGRYCG 1 cut(s) 1822
BsiHKCI CYCGRG 2 cut(s) 1839, 2539
BsiSI CCGG 5 cut(s) 1392, 1637, 1682, 2083, 2623
BsiWI CGTACG 1 cut(s) 1928
BslFI GGGAC 1 cut(s) 2799
BslI CCNNNNNNNGG 2 cut(s) 1917, 2622
BsmAI GTCTC 3 cut(s) 2301, 2515, 2710
BsmBI CGTCTC 1 cut(s) 2515
BsmFI GGGAC 1 cut(s) 2799
BsmI GAATGC 2 cut(s) 2498, 2810
BsnI GGCC 2 cut(s) 1821, 2349
BsoBI CYCGRG 2 cut(s) 1839, 2539
Bsp1407I TGTACA 1 cut(s) 873
BspACI CCGC 3 cut(s) 1740, 1918, 2284
BspANI GGCC 2 cut(s) 1821, 2349
BspCNI CTCAG 4 cut(s) 183, 1164, 2143, 2389
BspDI ATCGAT 1 cut(s) 1118
BspHI TCATGA 2 cut(s) 556, 1569
BspLI GGNNCC 1 cut(s) 2632
BspMAI CTGCAG 1 cut(s) 2854
BspPI GGATC 9 cut(s) 413, 528, 572, 1123, 1946, 2094, 2226, 2297, 2805
BspQI GCTCTTC 2 cut(s) 1756, 1800
BsrDI GCAATG 3 cut(s) 86, 402, 414
BsrGI TGTACA 1 cut(s) 873
BsrI ACTGG 5 cut(s) 440, 1002, 1465, 2136, 2306
BssECI CCNNGG 3 cut(s) 1390, 1527, 2189
BssNI GRCGYC 1 cut(s) 2508
Bst2UI CCWGG 3 cut(s) 2191, 2343, 2741
Bst4CI ACNGT 5 cut(s) 68, 339, 496, 1510, 2330
Bst6I CTCTTC 2 cut(s) 1756, 1800
BstACI GRCGYC 1 cut(s) 2508
BstAUI TGTACA 1 cut(s) 873
BstBAI YACGTR 3 cut(s) 89, 1663, 1928
BstC8I GCNNGC 3 cut(s) 1253, 1715, 1747
BstDEI CTNAG 7 cut(s) 170, 629, 1172, 1483, 2143, 2151, 2397
BstDSI CCRYGG 1 cut(s) 1527
BstEII GGTNACC 2 cut(s) 183, 797
BstHHI GCGC 1 cut(s) 1559
BstMAI GTCTC 3 cut(s) 2301, 2515, 2710
BstMCI CGRYCG 1 cut(s) 1822
BstMWI GCNNNNNNNGC 4 cut(s) 152, 2734, 2758, 2816
BstNI CCWGG 3 cut(s) 2191, 2343, 2741
BstNSI RCATGY 3 cut(s) 198, 957, 2752
BstPI GGTNACC 2 cut(s) 183, 797
BstSCI CCNGG 7 cut(s) 1390, 1635, 2082, 2189, 2341, 2622, 2739
BstSFI CTRYAG 2 cut(s) 2012, 2850
BstSNI TACGTA 1 cut(s) 1663
BstV1I GCAGC 3 cut(s) 1754, 1902, 2794
BstV2I GAAGAC 2 cut(s) 764, 2177
BstX2I RGATCY 3 cut(s) 520, 1357, 2218
BstYI RGATCY 3 cut(s) 520, 1357, 2218
BstZI CGGCCG 1 cut(s) 1819
Bsu15I ATCGAT 1 cut(s) 1118
BsuI GTATCC 1 cut(s) 1588
BsuRI GGCC 2 cut(s) 1821, 2349
BsuTUI ATCGAT 1 cut(s) 1118
BtgI CCRYGG 1 cut(s) 1527
BtrI CACGTC 1 cut(s) 1594
BtsIMutI CAGTG 4 cut(s) 122, 1458, 1506, 2313
Cac8I GCNNGC 3 cut(s) 1253, 1715, 1747
CciI TCATGA 2 cut(s) 556, 1569
CfoI GCGC 1 cut(s) 1559
Cfr13I GGNCC 2 cut(s) 117, 2311
ClaI ATCGAT 1 cut(s) 1118
CseI GACGC 2 cut(s) 13, 720
CsiI ACCWGGT 1 cut(s) 2341
DdeI CTNAG 7 cut(s) 170, 629, 1172, 1483, 2143, 2151, 2397
EaeI YGGCCR 2 cut(s) 1819, 2347
EagI CGGCCG 1 cut(s) 1819
Eam1104I CTCTTC 2 cut(s) 1756, 1800
EarI CTCTTC 2 cut(s) 1756, 1800
EclXI CGGCCG 1 cut(s) 1819
Eco105I TACGTA 1 cut(s) 1663
Eco32I GATATC 4 cut(s) 658, 936, 2536, 2831
Eco47I GGWCC 2 cut(s) 117, 2311
Eco52I CGGCCG 1 cut(s) 1819
Eco57I CTGAAG 3 cut(s) 117, 993, 2477
Eco88I CYCGRG 2 cut(s) 1839, 2539
Eco91I GGTNACC 2 cut(s) 183, 797
EcoO65I GGTNACC 2 cut(s) 183, 797
EcoRI GAATTC 1 cut(s) 1607
EcoRII CCWGG 3 cut(s) 2189, 2341, 2739
EcoRV GATATC 4 cut(s) 658, 936, 2536, 2831
EcoT22I ATGCAT 1 cut(s) 404
Esp3I CGTCTC 1 cut(s) 2515
FalI AAGNNNNNCTT 2 cut(s) 2037, 2069
FaqI GGGAC 1 cut(s) 2799
FbaI TGATCA 1 cut(s) 2722
Fnu4HI GCNGC 5 cut(s) 1743, 1916, 1919, 2808, 2853
Fsp4HI GCNGC 5 cut(s) 1743, 1916, 1919, 2808, 2853
FspBI CTAG 2 cut(s) 1961, 2816
FspI TGCGCA 1 cut(s) 1558
GlaI GCGC 1 cut(s) 1558
GluI GCNGC 5 cut(s) 1743, 1916, 1919, 2808, 2853
GsuI CTGGAG 1 cut(s) 2723
HaeIII GGCC 2 cut(s) 1821, 2349
HapII CCGG 5 cut(s) 1392, 1637, 1682, 2083, 2623
HgaI GACGC 2 cut(s) 13, 720
HhaI GCGC 1 cut(s) 1559
Hin1I GRCGYC 1 cut(s) 2508
Hin6I GCGC 1 cut(s) 1557
HinP1I GCGC 1 cut(s) 1557
HincII GTYRAC 2 cut(s) 1986, 2746
HindII GTYRAC 2 cut(s) 1986, 2746
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 7 cut(s) 11, 343, 587, 593, 1304, 2179, 2233
HpaI GTTAAC 1 cut(s) 1986
HpaII CCGG 5 cut(s) 1392, 1637, 1682, 2083, 2623
HphI GGTGA 5 cut(s) 177, 1426, 1651, 1802, 2072
Hpy99I CGWCG 1 cut(s) 736
HpyAV CCTTC 8 cut(s) 349, 1106, 1537, 1595, 1882, 2209, 2372, 2584
HpyCH4III ACNGT 5 cut(s) 68, 339, 496, 1510, 2330
HpyCH4IV ACGT 8 cut(s) 71, 88, 669, 1593, 1662, 1777, 1927, 2508
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 2734, 2758, 2816
HpyF3I CTNAG 7 cut(s) 170, 629, 1172, 1483, 2143, 2151, 2397
HpySE526I ACGT 8 cut(s) 71, 88, 669, 1593, 1662, 1777, 1927, 2508
Hsp92I GRCGYC 1 cut(s) 2508
HspAI GCGC 1 cut(s) 1557
Ksp22I TGATCA 1 cut(s) 2722
KspAI GTTAAC 1 cut(s) 1986
LguI GCTCTTC 2 cut(s) 1756, 1800
LmnI GCTCC 3 cut(s) 899, 1546, 2742
Lsp1109I GCAGC 3 cut(s) 1754, 1902, 2794
LweI GCATC 8 cut(s) 252, 822, 955, 1081, 2137, 2295, 2352, 2770
MabI ACCWGGT 1 cut(s) 2341
MaeI CTAG 2 cut(s) 1961, 2816
MaeII ACGT 8 cut(s) 71, 88, 669, 1593, 1662, 1777, 1927, 2508
MaeIII GTNAC 8 cut(s) 157, 183, 697, 797, 1187, 1202, 1773, 1906
MflI RGATCY 3 cut(s) 520, 1357, 2218
MlsI TGGCCA 1 cut(s) 2349
MluNI TGGCCA 1 cut(s) 2349
MlyI GAGTC 4 cut(s) 5, 581, 587, 2227
MmeI TCCRAC 3 cut(s) 119, 184, 2631
Mox20I TGGCCA 1 cut(s) 2349
Mph1103I ATGCAT 1 cut(s) 404
MroXI GAANNNNTTC 1 cut(s) 249
MscI TGGCCA 1 cut(s) 2349
MslI CAYNNNNRTG 7 cut(s) 193, 373, 407, 615, 1637, 2291, 2766
Msp20I TGGCCA 1 cut(s) 2349
MspI CCGG 5 cut(s) 1392, 1637, 1682, 2083, 2623
MspR9I CCNGG 7 cut(s) 1392, 1637, 2084, 2191, 2343, 2624, 2741
Mva1269I GAATGC 2 cut(s) 2498, 2810
MvaI CCWGG 3 cut(s) 2191, 2343, 2741
MwoI GCNNNNNNNGC 4 cut(s) 152, 2734, 2758, 2816
NciI CCSGG 4 cut(s) 1392, 1637, 2084, 2624
NlaIV GGNNCC 1 cut(s) 2632
NmuCI GTSAC 4 cut(s) 183, 697, 1187, 1773
NsbI TGCGCA 1 cut(s) 1558
NsiI ATGCAT 1 cut(s) 404
NspI RCATGY 3 cut(s) 198, 957, 2752
PaeR7I CTCGAG 1 cut(s) 2539
PagI TCATGA 2 cut(s) 556, 1569
PciSI GCTCTTC 2 cut(s) 1756, 1800
PctI GAATGC 2 cut(s) 2498, 2810
PdmI GAANNNNTTC 1 cut(s) 249
PfeI GAWTC 3 cut(s) 343, 1304, 2179
Pfl23II CGTACG 1 cut(s) 1928
PkrI GCNGC 5 cut(s) 1744, 1917, 1920, 2809, 2854
PleI GAGTC 4 cut(s) 5, 581, 587, 2227
PpsI GAGTC 4 cut(s) 5, 581, 587, 2227
Ppu21I YACGTR 3 cut(s) 89, 1663, 1928
Psp6I CCWGG 3 cut(s) 2189, 2341, 2739
PspEI GGTNACC 2 cut(s) 183, 797
PspGI CCWGG 3 cut(s) 2189, 2341, 2739
PspLI CGTACG 1 cut(s) 1928
PspN4I GGNNCC 1 cut(s) 2632
PspPI GGNCC 2 cut(s) 117, 2311
PstI CTGCAG 1 cut(s) 2854
PsuI RGATCY 3 cut(s) 520, 1357, 2218
RseI CAYNNNNRTG 7 cut(s) 193, 373, 407, 615, 1637, 2291, 2766
SapI GCTCTTC 2 cut(s) 1756, 1800
SatI GCNGC 5 cut(s) 1743, 1916, 1919, 2808, 2853
Sau96I GGNCC 2 cut(s) 117, 2311
SchI GAGTC 4 cut(s) 5, 581, 587, 2227
ScrFI CCNGG 7 cut(s) 1392, 1637, 2084, 2191, 2343, 2624, 2741
SexAI ACCWGGT 1 cut(s) 2341
SfaNI GCATC 8 cut(s) 252, 822, 955, 1081, 2137, 2295, 2352, 2770
SfcI CTRYAG 2 cut(s) 2012, 2850
Sfr274I CTCGAG 1 cut(s) 2539
SinI GGWCC 2 cut(s) 117, 2311
SlaI CTCGAG 1 cut(s) 2539
SmiMI CAYNNNNRTG 7 cut(s) 193, 373, 407, 615, 1637, 2291, 2766
SmlI CTYRAG 2 cut(s) 2054, 2539
SmoI CTYRAG 2 cut(s) 2054, 2539
SnaBI TACGTA 1 cut(s) 1663
SpeI ACTAGT 1 cut(s) 1960
SsiI CCGC 3 cut(s) 1740, 1918, 2284
SspI AATATT 2 cut(s) 1083, 1440
SspMI CTAG 2 cut(s) 1961, 2816
StyD4I CCNGG 7 cut(s) 1390, 1635, 2082, 2189, 2341, 2622, 2739
TaaI ACNGT 5 cut(s) 68, 339, 496, 1510, 2330
TaiI ACGT 8 cut(s) 74, 91, 672, 1596, 1665, 1780, 1930, 2511
TaqI TCGA 9 cut(s) 417, 567, 1118, 1669, 1835, 2177, 2199, 2301, 2540
TatI WGTACW 3 cut(s) 873, 2128, 2251
TauI GCSGC 1 cut(s) 1921
TfiI GAWTC 3 cut(s) 343, 1304, 2179
TscAI CASTG 4 cut(s) 129, 1465, 1513, 2313
TseFI GTSAC 4 cut(s) 183, 697, 1187, 1773
TseI GCWGC 4 cut(s) 1742, 1915, 2807, 2852
Tsp45I GTSAC 4 cut(s) 183, 697, 1187, 1773
TspGWI ACGGA 2 cut(s) 533, 2803
TspRI CASTG 4 cut(s) 129, 1465, 1513, 2313
VpaK11BI GGWCC 2 cut(s) 117, 2311
XapI RAATTY 2 cut(s) 1607, 1898
XceI RCATGY 3 cut(s) 198, 957, 2752
XhoI CTCGAG 1 cut(s) 2539
XmnI GAANNNNTTC 1 cut(s) 249
XspI CTAG 2 cut(s) 1961, 2816
ZraI GACGTC 1 cut(s) 2509
Zsp2I ATGCAT 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.