Rroxscaffold_1G00055100

Transglycosylase SLT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0012112
Physical Location & Seq
Reverse (-)
76512052 .. 76519741
7690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00055100.1

Sequence Viewer

Length: 1698 bp
ATGGTTGCATTGCCACAGAACTTCCCGGCAACAATGGTCCTCCAATTTCATCATATATACGAACCCAATTCCATTCTCTCTTTCTTGCCAATCAGACCAGGCGCTTCTTCCTCCTCCTCATTGAAGCTCTGGTGGGTCCCCCTCTTTCCCTCTTACCATCAGCCAAAGGAGGAAGTGGAAGCAGCAGCTGTTTCTTCTTCCTCATTGCACCACACCTCTGGCTGGATGGTTATTAAGCTGCAAGAAGTGGATAGAATCTGGAATGCCGAAATTCGCGATTTGATGGTTATTATATGTGCCCTGTTCAATATTGATAAGTATCACAAAAAAAAGGCTAGGATGGCTGTCAGCTATAAATTTTGGAATGAATGCATTGACCCCTTGGACATGCAAGCACTGTGGAATGTTCCTAAAGTGAGCGCTGAATGGGAAGATGCTGGAGAGACCAAAGGACAGAAAGTTCACCTCTCACGTGATCCTGATGGACAGGTTTATTTGACACAGACTGAGATGAAGGCTGTGGCTGAGATCGTCGTTAGCAGGCATTTTTCTGGAAAGATAGATCCTGATATGATTTGTGCTATTGCTGAGCTTGAAAGTGATAGACAGCCCCTTTGTCAGCGGTATGACAAAAAAGCTAAGGCCACTCACCTAGGGATGATGCAAATTTTACCAAAAACTGCCGATTGGCTGGCTAGTGAGAAGGGTTACGGGGCATATCAATTGAACGGGAATGAACTTCTTCTGTTCAGGCCTTTTGAAAGTGTATATTTTGGTGCTGCTTATCTTATTTGGTTATCAAGCTTTGAGCAGAAAGAAAGAAGTGAAGAGTTTGTAGTTAGGGCATATAGAGGAGGTACTAAAAAGGCCACTCACAAATCAACTCTGAAGTATTGGCAACGGTATCTTTCCGTCAAAGAATCTCTTCCATCCAGAAAAAGTCTTGAAGGTCATCGATCTGTTGAAGAGGTTAATGCTTCTCTTGCCCTTGCTAAAAAGACTGGTTCATCGCAAAACACAGGTGGTATGTACACATATTGGGATTCCGTAACTTCTCCAGAAGACATGGTGGACATGTGGAATCATCCTGAAGTCTCTAAAGAGTGGACTAAAGCTGGAGAGAAACAGGGACAAGTGCGCTTCTCCCAAGATGATAAGAAAAGACCATATCTTTCTCGGGTGGAACTGAAGGCAGTGGCAGAAATCATACTCATAAAACACTTCAGCACAAAGCCACTTAAAGTTCTATTGCGTCTTTGTCTAATAGTCAAGCATTTTCTTTATTGTTATTCTTATTTTCCTGGTGCACAGTCAGTTCTTTGTGCTCTGGCAGAGATTATAAGCATGCGATTCCTGAGTGGCATTGGACCACGTCCTGGTATAATGGGAATCGACTATTCTACAGTTGTATGGCTTTACAGGGAGATGGGCTTTAGGGCATATAGAACTATTTCTGTTGATGATATTTCCAAGCCATTTGTGTCAATGTACTTTGGTGCAGCCTATTTAGTATGGTTAGTGGAATGCGAAGGGAGGTTACAACCTCCACAGTATATTATTCAGGCTTATATCTCAGGGCCAAAGAATGTGAATCTTCAGGATACAGGTCCTGAGTATCTCAAGTTTGAGGAAGCCTTGAGCTACTACGAAGATACAAAGCCGAATCCTAGGGATCAAGGGAGCTGCACCATCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SLT

Protein Analysis

565

Amino Acids

64.62

Weight (kDa)

8.34

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SLT PF01464 186 - 298 1.3e-10 Transglycosylase SLT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012112)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16290 AT1G16290
fragaria_vesca FvH4_3g14650
malus_domestica MD05G1234300.v1.1 MD10G1210800.v1.1
prunus_persica Prupe.4G131800_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0024141
rosa_laevigata RLG00000032772
rosa_multiflora Rmu_sc0004033.1_g000015
rosa_roxburghii Rroxscaffold_1G00055100 Rroxscaffold_1G00055680
rosa_rugosa Rorug05G0081800 Rorug05G0081800 Rorug05G0081900
rosa_samantha Rh5AG172500 Rh5BG169100 Rh5CG184800 Rh5DG171300
rosa_wichuraiana Rw5G015560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1340
AccB7I CCANNNNNTGG 1 cut(s) 1376
AccII CGCG 1 cut(s) 276
AciI CCGC 1 cut(s) 622
AclWI GGATC 3 cut(s) 470, 557, 1680
AcsI RAATTY 3 cut(s) 270, 356, 666
AcuI CTGAAG 5 cut(s) 908, 1110, 1207, 1208, 1580
AcvI CACGTG 1 cut(s) 473
AfaI GTAC 3 cut(s) 859, 1031, 1490
AfeI AGCGCT 1 cut(s) 421
AfiI CCNNNNNNNGG 2 cut(s) 222, 1376
AflIII ACRYGT 1 cut(s) 1074
AgsI TTSAA 7 cut(s) 124, 307, 596, 727, 761, 947, 965
AjiI CACGTC 1 cut(s) 1373
AjnI CCWGG 3 cut(s) 97, 1300, 1375
AloI GAACNNNNNNTCC 2 cut(s) 444, 476
Alw21I GWGCWC 2 cut(s) 1309, 1327
Alw26I GTCTC 2 cut(s) 437, 1099
Alw44I GTGCAC 1 cut(s) 1305
AlwI GGATC 3 cut(s) 470, 557, 1680
AlwNI CAGNNNCTG 2 cut(s) 188, 1610
Ama87I CYCGRG 1 cut(s) 1176
Aor51HI AGCGCT 1 cut(s) 421
AoxI GGCC 4 cut(s) 642, 752, 867, 1577
ApaLI GTGCAC 1 cut(s) 1305
ApeKI GCWGC 6 cut(s) 182, 185, 238, 779, 1499, 1683
ApoI RAATTY 3 cut(s) 270, 356, 666
ArsI GACNNNNNNTTYG 2 cut(s) 597, 629
Asp700I GAANNNNTTC 3 cut(s) 741, 924, 1450
AspA2I CCTAGG 2 cut(s) 652, 1667
AspLEI GCGC 3 cut(s) 104, 422, 1140
AspS9I GGNCC 5 cut(s) 37, 136, 1367, 1577, 1607
AsuC2I CCSGG 1 cut(s) 26
AsuHPI GGTGA 2 cut(s) 455, 641
AvaI CYCGRG 1 cut(s) 1176
AvaII GGWCC 4 cut(s) 37, 136, 1367, 1607
AvrII CCTAGG 2 cut(s) 652, 1667
BaeGI GKGCMC 2 cut(s) 301, 1309
BarI GAAGNNNNNNTAC 2 cut(s) 1521, 1553
BbrPI CACGTG 1 cut(s) 473
BbsI GAAGAC 1 cut(s) 1068
Bbv12I GWGCWC 2 cut(s) 1309, 1327
BbvI GCAGC 6 cut(s) 194, 197, 225, 766, 1511, 1670
BccI CCATC 8 cut(s) 165, 220, 277, 334, 476, 937, 1420, 1697
BciT130I CCWGG 3 cut(s) 99, 1302, 1377
BciVI GTATCC 1 cut(s) 1594
BcnI CCSGG 1 cut(s) 26
BcoDI GTCTC 2 cut(s) 437, 1099
BfaI CTAG 4 cut(s) 336, 653, 696, 1668
BfmI CTRYAG 1 cut(s) 1401
BfoI RGCGCY 2 cut(s) 105, 423
BfuI GTATCC 1 cut(s) 1594
BisI GCNGC 6 cut(s) 183, 186, 239, 780, 1500, 1684
BlnI CCTAGG 2 cut(s) 652, 1667
BlpI GCTNAGC 1 cut(s) 588
BlsI GCNGC 6 cut(s) 184, 187, 240, 781, 1501, 1685
Bme1390I CCNGG 4 cut(s) 26, 99, 1302, 1377
Bme18I GGWCC 4 cut(s) 37, 136, 1367, 1607
BmeT110I CYCGRG 1 cut(s) 1176
BmgBI CACGTC 1 cut(s) 1373
BmgT120I GGNCC 5 cut(s) 37, 136, 1367, 1577, 1607
BmiI GGNNCC 2 cut(s) 137, 138
BmrFI CCNGG 4 cut(s) 26, 99, 1302, 1377
BmsI GCATC 2 cut(s) 424, 651
BpiI GAAGAC 1 cut(s) 1068
BpmI CTGGAG 3 cut(s) 459, 1041, 1137
Bpu10I CCTNAGC 1 cut(s) 639
Bpu1102I GCTNAGC 1 cut(s) 588
BpuEI CTTGAG 2 cut(s) 1604, 1657
BpuMI CCSGG 1 cut(s) 26
Bsa29I ATCGAT 1 cut(s) 955
BsaAI YACGTR 1 cut(s) 473
BsaBI GATNNNNATC 1 cut(s) 318
BsaI GGTCTC 1 cut(s) 437
BsaJI CCNNGG 3 cut(s) 381, 652, 1667
Bsc4I CCNNNNNNNGG 2 cut(s) 222, 1376
Bse1I ACTGG 1 cut(s) 1006
Bse3DI GCAATG 2 cut(s) 8, 203
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 3 cut(s) 99, 1302, 1377
BseCI ATCGAT 1 cut(s) 955
BseDI CCNNGG 3 cut(s) 381, 652, 1667
BseGI GGATG 5 cut(s) 231, 345, 663, 929, 1084
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 2 cut(s) 222, 1376
BseMI GCAATG 2 cut(s) 8, 203
BseMII CTCAG 6 cut(s) 498, 516, 579, 1346, 1587, 1602
BseNI ACTGG 1 cut(s) 1006
BseRI GAGGAG 3 cut(s) 103, 106, 867
BseSI GKGCMC 2 cut(s) 301, 1309
BseXI GCAGC 6 cut(s) 194, 197, 225, 766, 1511, 1670
BsgI GTGCAG 2 cut(s) 1518, 1669
Bsh1236I CGCG 1 cut(s) 276
BshFI GGCC 4 cut(s) 644, 754, 869, 1579
BshVI ATCGAT 1 cut(s) 955
BsiHKAI GWGCWC 2 cut(s) 1309, 1327
BsiHKCI CYCGRG 1 cut(s) 1176
BsiSI CCGG 1 cut(s) 26
BslFI GGGAC 2 cut(s) 122, 1143
BslI CCNNNNNNNGG 2 cut(s) 222, 1376
BsmAI GTCTC 2 cut(s) 437, 1099
BsmFI GGGAC 2 cut(s) 122, 1143
BsmI GAATGC 3 cut(s) 268, 374, 1529
BsnI GGCC 4 cut(s) 644, 754, 869, 1579
Bso31I GGTCTC 1 cut(s) 437
BsoBI CYCGRG 1 cut(s) 1176
Bsp1286I GDGCHC 3 cut(s) 301, 1309, 1327
Bsp1407I TGTACA 1 cut(s) 1029
Bsp143I GATC 5 cut(s) 475, 528, 562, 956, 1672
Bsp1720I GCTNAGC 1 cut(s) 588
Bsp68I TCGCGA 1 cut(s) 276
BspACI CCGC 1 cut(s) 622
BspANI GGCC 4 cut(s) 644, 754, 869, 1579
BspCNI CTCAG 6 cut(s) 499, 517, 580, 1347, 1586, 1603
BspDI ATCGAT 1 cut(s) 955
BspFNI CGCG 1 cut(s) 276
BspLI GGNNCC 2 cut(s) 137, 138
BspPI GGATC 3 cut(s) 470, 557, 1680
BspTNI GGTCTC 1 cut(s) 437
BsrDI GCAATG 2 cut(s) 8, 203
BsrGI TGTACA 1 cut(s) 1029
BsrI ACTGG 1 cut(s) 1006
BssECI CCNNGG 3 cut(s) 381, 652, 1667
BssMI GATC 5 cut(s) 475, 528, 562, 956, 1672
BssT1I CCWWGG 3 cut(s) 381, 652, 1667
Bst2UI CCWGG 3 cut(s) 99, 1302, 1377
Bst4CI ACNGT 5 cut(s) 399, 903, 1311, 1405, 1551
Bst6I CTCTTC 3 cut(s) 822, 930, 960
BstAUI TGTACA 1 cut(s) 1029
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 4 cut(s) 393, 542, 693, 1346
BstDEI CTNAG 7 cut(s) 507, 525, 588, 639, 1355, 1573, 1611
BstF5I GGATG 5 cut(s) 231, 345, 663, 929, 1084
BstFNI CGCG 1 cut(s) 276
BstH2I RGCGCY 2 cut(s) 105, 423
BstHHI GCGC 3 cut(s) 104, 422, 1140
BstKTI GATC 5 cut(s) 478, 531, 565, 959, 1675
BstMAI GTCTC 2 cut(s) 437, 1099
BstMBI GATC 5 cut(s) 475, 528, 562, 956, 1672
BstMWI GCNNNNNNNGC 2 cut(s) 341, 983
BstNI CCWGG 3 cut(s) 99, 1302, 1377
BstNSI RCATGY 3 cut(s) 391, 1078, 1348
BstSCI CCNGG 4 cut(s) 24, 97, 1300, 1375
BstSFI CTRYAG 1 cut(s) 1401
BstSLI GKGCMC 2 cut(s) 301, 1309
BstUI CGCG 1 cut(s) 276
BstV1I GCAGC 6 cut(s) 194, 197, 225, 766, 1511, 1670
BstV2I GAAGAC 1 cut(s) 1068
BstX2I RGATCY 1 cut(s) 562
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 1 cut(s) 562
Bsu15I ATCGAT 1 cut(s) 955
BsuI GTATCC 1 cut(s) 1594
BsuRI GGCC 4 cut(s) 644, 754, 869, 1579
BsuTUI ATCGAT 1 cut(s) 955
BtgZI GCGATG 1 cut(s) 993
BtrI CACGTC 1 cut(s) 1373
BtsCI GGATG 5 cut(s) 231, 345, 663, 929, 1084
BtsI GCAGTG 1 cut(s) 1200
BtsIMutI CAGTG 2 cut(s) 395, 1200
BtuMI TCGCGA 1 cut(s) 276
Cac8I GCNNGC 4 cut(s) 393, 542, 693, 1346
CaiI CAGNNNCTG 2 cut(s) 188, 1610
CfoI GCGC 3 cut(s) 104, 422, 1140
Cfr13I GGNCC 5 cut(s) 37, 136, 1367, 1577, 1607
ClaI ATCGAT 1 cut(s) 955
CseI GACGC 1 cut(s) 1241
Csp6I GTAC 3 cut(s) 858, 1030, 1489
CspCI CAANNNNNGTGG 2 cut(s) 380, 415
CviAII CATG 5 cut(s) 388, 1066, 1075, 1345, 1693
CviQI GTAC 3 cut(s) 858, 1030, 1489
DdeI CTNAG 7 cut(s) 507, 525, 588, 639, 1355, 1573, 1611
DpnI GATC 5 cut(s) 477, 530, 564, 958, 1674
DpnII GATC 5 cut(s) 475, 528, 562, 956, 1672
Eam1104I CTCTTC 3 cut(s) 822, 930, 960
EarI CTCTTC 3 cut(s) 822, 930, 960
Eco130I CCWWGG 3 cut(s) 381, 652, 1667
Eco147I AGGCCT 1 cut(s) 754
Eco31I GGTCTC 1 cut(s) 437
Eco47I GGWCC 4 cut(s) 37, 136, 1367, 1607
Eco47III AGCGCT 1 cut(s) 421
Eco57I CTGAAG 5 cut(s) 908, 1110, 1207, 1208, 1580
Eco72I CACGTG 1 cut(s) 473
Eco88I CYCGRG 1 cut(s) 1176
EcoO109I RGGNCCY 2 cut(s) 136, 1607
EcoRII CCWGG 3 cut(s) 97, 1300, 1375
EcoT14I CCWWGG 3 cut(s) 381, 652, 1667
EcoT22I ATGCAT 1 cut(s) 374
ErhI CCWWGG 3 cut(s) 381, 652, 1667
FaeI CATG 5 cut(s) 391, 1069, 1078, 1348, 1696
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 2 cut(s) 122, 1143
FatI CATG 5 cut(s) 387, 1065, 1074, 1344, 1692
Fnu4HI GCNGC 6 cut(s) 183, 186, 239, 780, 1500, 1684
FokI GGATG 5 cut(s) 238, 352, 670, 916, 1071
Fsp4HI GCNGC 6 cut(s) 183, 186, 239, 780, 1500, 1684
FspBI CTAG 4 cut(s) 336, 653, 696, 1668
GlaI GCGC 3 cut(s) 103, 421, 1139
GluI GCNGC 6 cut(s) 183, 186, 239, 780, 1500, 1684
GsuI CTGGAG 3 cut(s) 459, 1041, 1137
HaeII RGCGCY 2 cut(s) 105, 423
HaeIII GGCC 4 cut(s) 644, 754, 869, 1579
HapII CCGG 1 cut(s) 26
HgaI GACGC 1 cut(s) 1241
HhaI GCGC 3 cut(s) 104, 422, 1140
Hin1II CATG 5 cut(s) 391, 1069, 1078, 1348, 1696
Hin6I GCGC 3 cut(s) 102, 420, 1138
HinP1I GCGC 3 cut(s) 102, 420, 1138
HindIII AAGCTT 1 cut(s) 802
HinfI GANTC 8 cut(s) 255, 920, 1043, 1081, 1350, 1389, 1591, 1663
HpaII CCGG 1 cut(s) 26
HphI GGTGA 2 cut(s) 455, 641
Hpy166II GTNNAC 5 cut(s) 463, 1032, 1072, 1107, 1307
Hpy188I TCNGA 2 cut(s) 95, 888
Hpy8I GTNNAC 5 cut(s) 463, 1032, 1072, 1107, 1307
Hpy99I CGWCG 1 cut(s) 536
HpyAV CCTTC 5 cut(s) 508, 697, 941, 1183, 1523
HpyCH4III ACNGT 5 cut(s) 399, 903, 1311, 1405, 1551
HpyCH4IV ACGT 2 cut(s) 472, 1372
HpyCH4V TGCA 9 cut(s) 8, 208, 241, 372, 391, 664, 1307, 1499, 1686
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 983
HpyF3I CTNAG 7 cut(s) 507, 525, 588, 639, 1355, 1573, 1611
HpySE526I ACGT 2 cut(s) 472, 1372
Hsp92II CATG 5 cut(s) 391, 1069, 1078, 1348, 1696
HspAI GCGC 3 cut(s) 102, 420, 1138
KflI GGGWCCC 1 cut(s) 136
Kzo9I GATC 5 cut(s) 475, 528, 562, 956, 1672
LmnI GCTCC 1 cut(s) 1680
Lsp1109I GCAGC 6 cut(s) 194, 197, 225, 766, 1511, 1670
LweI GCATC 2 cut(s) 424, 651
MaeI CTAG 4 cut(s) 336, 653, 696, 1668
MaeII ACGT 2 cut(s) 472, 1372
MaeIII GTNAC 3 cut(s) 707, 1048, 1536
MalI GATC 5 cut(s) 477, 530, 564, 958, 1674
MboI GATC 5 cut(s) 475, 528, 562, 956, 1672
MfeI CAATTG 1 cut(s) 722
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 3 cut(s) 301, 1309, 1327
MluCI AATT 6 cut(s) 44, 67, 270, 356, 666, 722
Mph1103I ATGCAT 1 cut(s) 374
MroXI GAANNNNTTC 3 cut(s) 741, 924, 1450
MseI TTAA 3 cut(s) 234, 972, 1239
MslI CAYNNNNRTG 1 cut(s) 1691
MspA1I CMGCKG 2 cut(s) 188, 622
MspI CCGG 1 cut(s) 26
MspR9I CCNGG 4 cut(s) 26, 99, 1302, 1377
MunI CAATTG 1 cut(s) 722
Mva1269I GAATGC 3 cut(s) 268, 374, 1529
MvaI CCWGG 3 cut(s) 99, 1302, 1377
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 2 cut(s) 341, 983
NciI CCSGG 1 cut(s) 26
NdeII GATC 5 cut(s) 475, 528, 562, 956, 1672
NlaIII CATG 5 cut(s) 391, 1069, 1078, 1348, 1696
NlaIV GGNNCC 2 cut(s) 137, 138
NruI TCGCGA 1 cut(s) 276
NsiI ATGCAT 1 cut(s) 374
NspI RCATGY 3 cut(s) 391, 1078, 1348
PaeI GCATGC 1 cut(s) 1348
PceI AGGCCT 1 cut(s) 754
PciI ACATGT 1 cut(s) 1074
PctI GAATGC 3 cut(s) 268, 374, 1529
PdmI GAANNNNTTC 3 cut(s) 741, 924, 1450
PfeI GAWTC 8 cut(s) 255, 920, 1043, 1081, 1350, 1389, 1591, 1663
PflFI GACNNNGTC 1 cut(s) 1371
PflMI CCANNNNNTGG 1 cut(s) 1376
PkrI GCNGC 6 cut(s) 184, 187, 240, 781, 1501, 1685
PmaCI CACGTG 1 cut(s) 473
PmlI CACGTG 1 cut(s) 473
Ppu21I YACGTR 1 cut(s) 473
PpuMI RGGWCCY 2 cut(s) 136, 1607
PscI ACATGT 1 cut(s) 1074
PsiI TTATAA 1 cut(s) 1340
Psp5II RGGWCCY 2 cut(s) 136, 1607
Psp6I CCWGG 3 cut(s) 97, 1300, 1375
PspCI CACGTG 1 cut(s) 473
PspGI CCWGG 3 cut(s) 97, 1300, 1375
PspN4I GGNNCC 2 cut(s) 137, 138
PspPI GGNCC 5 cut(s) 37, 136, 1367, 1577, 1607
PspPPI RGGWCCY 2 cut(s) 136, 1607
PstNI CAGNNNCTG 2 cut(s) 188, 1610
PsuI RGATCY 1 cut(s) 562
PsyI GACNNNGTC 1 cut(s) 1371
PvuII CAGCTG 1 cut(s) 188
RruI TCGCGA 1 cut(s) 276
RsaI GTAC 3 cut(s) 859, 1031, 1490
RsaNI GTAC 3 cut(s) 858, 1030, 1489
RseI CAYNNNNRTG 1 cut(s) 1691
SaqAI TTAA 3 cut(s) 234, 972, 1239
SatI GCNGC 6 cut(s) 183, 186, 239, 780, 1500, 1684
Sau3AI GATC 5 cut(s) 475, 528, 562, 956, 1672
Sau96I GGNCC 5 cut(s) 37, 136, 1367, 1577, 1607
ScrFI CCNGG 4 cut(s) 26, 99, 1302, 1377
SduI GDGCHC 3 cut(s) 301, 1309, 1327
SfaNI GCATC 2 cut(s) 424, 651
SfcI CTRYAG 1 cut(s) 1401
SinI GGWCC 4 cut(s) 37, 136, 1367, 1607
SmiMI CAYNNNNRTG 1 cut(s) 1691
SmlI CTYRAG 2 cut(s) 1619, 1636
SmoI CTYRAG 2 cut(s) 1619, 1636
SphI GCATGC 1 cut(s) 1348
Sse9I AATT 6 cut(s) 44, 67, 270, 356, 666, 722
SseBI AGGCCT 1 cut(s) 754
SsiI CCGC 1 cut(s) 622
SspI AATATT 1 cut(s) 310
SspMI CTAG 4 cut(s) 336, 653, 696, 1668
StuI AGGCCT 1 cut(s) 754
StyD4I CCNGG 4 cut(s) 24, 97, 1300, 1375
StyI CCWWGG 3 cut(s) 381, 652, 1667
TaaI ACNGT 5 cut(s) 399, 903, 1311, 1405, 1551
TaiI ACGT 2 cut(s) 475, 1375
TaqI TCGA 2 cut(s) 955, 1392
TasI AATT 6 cut(s) 44, 67, 270, 356, 666, 722
TatI WGTACW 2 cut(s) 1029, 1488
TfiI GAWTC 8 cut(s) 255, 920, 1043, 1081, 1350, 1389, 1591, 1663
Tru1I TTAA 3 cut(s) 234, 972, 1239
Tru9I TTAA 3 cut(s) 234, 972, 1239
TscAI CASTG 2 cut(s) 402, 1200
TseI GCWGC 6 cut(s) 182, 185, 238, 779, 1499, 1683
TspDTI ATGAA 5 cut(s) 38, 381, 527, 750, 996
TspGWI ACGGA 2 cut(s) 901, 1036
TspRI CASTG 2 cut(s) 402, 1200
Tth111I GACNNNGTC 1 cut(s) 1371
Van91I CCANNNNNTGG 1 cut(s) 1376
VneI GTGCAC 1 cut(s) 1305
VpaK11BI GGWCC 4 cut(s) 37, 136, 1367, 1607
XapI RAATTY 3 cut(s) 270, 356, 666
XceI RCATGY 3 cut(s) 391, 1078, 1348
XmaJI CCTAGG 2 cut(s) 652, 1667
XmnI GAANNNNTTC 3 cut(s) 741, 924, 1450
XspI CTAG 4 cut(s) 336, 653, 696, 1668
Zsp2I ATGCAT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.