Rorug05G0081800

Transglycosylase SLT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0012112
Physical Location & Seq
Reverse (-)
7072805 .. 7076884
4080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0081800.1

Sequence Viewer

Length: 1860 bp
ATGGCGGGAGAGGAATCCACGCCGTACTTGGAAGAGCTCCGCCATCTCCGGAGCATGGCCAAGCACCCCAGCATCATCAACCTCCTTTCCTCTGAGATTTCCAGTTTGGAAAAGGATCAATCTCCTCCACTACCGCCGCAATCTTCACCACCGCGCCTCACCCAAGAGGCCACGTCAGCCGCTGAGAAGGCAAAGCAGACTAATGTCACGGCAAGATCGTGTGGCAAGAAATATGTAGCAAGTGAAGATGAAAAGGATCCGACGAAATACTATGAAAACAGGCTGAATTACATTGCTACCCTGAAAAATCCATATCCCCATGAATCCTCTGTTTCAAAGAGTATAACTGAATATGTGAAGGAGTATGAAGGCCTCCTCAAGGACCAACAAGGGGTGCATCTTGAGAATGTCACAGAATCCTTGGCTGGAATGGTCATGAAACAAAGATCCTCCGGCCCAGGGTGTTTCTTTTATGATTTATGTGGTGATCGAGCTCGAGTACAAATTTATGCTAGTGCCAGCAATTCGGATATGGATAAATCTGAATTTGTTAAGATCCACTCTAATGTGAAGCGCGGTGACATTGTTAATGTGACCGGGTTTCCAGGTAAAACAATGAGTGGCCAGATCAGCATTTTTGCAAGATCATTTGTAGTCTTAGCACCTTGTCTCCACATGATGCCTACTGTCAATCCAAAGAAAATAACTGAAGAAACTGAAGAATGGGGTCCCGGACGTCCCAGGAATCCTGAAACATACAGTTTAAAAGACCAGGAAACTCGCTATCGTCAGCGTCACCTGGATTTAAGGATAAACCCTGATGTTCAACGTATAGTGGTGGAGACCAGGAGTGAGATCACTTTCTATATTAGGAGGTTTCTTCATAGTCGTCAGTTCCGTGAAGTTGAAACTCCAATATTGAACACGACTGCTGGTGGAGCAACTGCGCGTCCTTTTATGACGCATCACAATGAACTTGACATGCAACTTTACATGCGCATTGCACCCGAACTCTATCTTAAACAGCTAGTTGTTGGTGGAATTGAACGCGTTTTTGAGATAGGCAAACAGTTTAGGAATGAGGGTATTGATCTGACACATAATCCTGAGTTCGCTACCTGTGAATTCTATCAGGCTTATGCAGACTATAATCACATGATGGAGCTCACTGAGGAAATGTTGAGTGGAATGGTCAAGGAACTTACAGGTGGATATAAGATTATGTATCATTCAAATGGACTTGATAAGGATCCAATTGAGATAGACTTCACACCCCCTTTCAGACGGATTGACATGATTGAGGAATTAAATAAGATTGCAAATCTTGAAATAAATCCGGAGGATCTCTTCAGTGAGGAAGCTAACAGTGATCTGAAGGTCGCGTGCAAGAAGTATGGGATCCAATGTCCACCTCCTGAAACAACAACTCGTTTATTGGACAAGCTTGTTGATCACTTTTTGGAAGAGCAATGTGTGAATCCAACATTTATAATCAACCATCCTGAGATAATGAGTCCATTGGCAAAGTGGCATCGATCAAGACCTGGCTTGACAGAACGCTTTGAATTGTTTGTCAGCAAGCATGAGCTTTGTAATGGATACACTGAACTGAATAATCCTATTGTCCAACGCCAACGATTCGCTAATCAACTCAAGGATAGACAATCCGGTGATGATGAAGCAATGCCTTTGGATGAAGGGTTTTGTAGAGCTCTTGAATATGGCTTACCTCCAACAGGTGGTGTGGGAATTGGCATTGACCGCCTTTGTATGCTTTTAACTGATTCTGTGAACATTAAGGAAGTCATCCCCTTCCCAACCATGAAGCCACAGGATCAGCCTTCAGCTAGACCCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SLT

Protein Analysis

619

Amino Acids

70.55

Weight (kDa)

5.69

Isoelectric Point (pI)

55.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA_anti-codon PF01336 140 - 220 2.9e-08 OB-fold nucleic acid binding domain
tRNA-synt_2 PF00152 257 - 608 2e-90 tRNA synthetases class II (D, K and N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012112)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16290 AT1G16290
fragaria_vesca FvH4_3g14650
malus_domestica MD05G1234300.v1.1 MD10G1210800.v1.1
prunus_persica Prupe.4G131800_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0024141
rosa_laevigata RLG00000032772
rosa_multiflora Rmu_sc0004033.1_g000015
rosa_roxburghii Rroxscaffold_1G00055100 Rroxscaffold_1G00055680
rosa_rugosa Rorug05G0081800 Rorug05G0081800 Rorug05G0081900
rosa_samantha Rh5AG172500 Rh5BG169100 Rh5CG184800 Rh5DG171300
rosa_wichuraiana Rw5G015560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1490
AatII GACGTC 1 cut(s) 739
Acc16I TGCGCA 1 cut(s) 998
AccB7I CCANNNNNTGG 1 cut(s) 1739
AccII CGCG 5 cut(s) 154, 576, 949, 1050, 1382
AccIII TCCGGA 2 cut(s) 48, 1336
AciI CCGC 8 cut(s) 5, 40, 134, 137, 152, 180, 576, 1762
AcoI YGGCCR 2 cut(s) 57, 622
AcsI RAATTY 3 cut(s) 504, 545, 1124
AcuI CTGAAG 5 cut(s) 729, 738, 1333, 1394, 1827
AcyI GRCGYC 1 cut(s) 736
AfaI GTAC 2 cut(s) 26, 501
AfiI CCNNNNNNNGG 6 cut(s) 55, 379, 391, 459, 1736, 1739
AflIII ACRYGT 1 cut(s) 1048
AgsI TTSAA 9 cut(s) 336, 827, 908, 922, 1046, 1233, 1328, 1565, 1718
AjiI CACGTC 1 cut(s) 174
AjnI CCWGG 7 cut(s) 457, 604, 740, 771, 798, 845, 1543
Alw21I GWGCWC 4 cut(s) 39, 496, 1167, 1714
Alw26I GTCTC 2 cut(s) 674, 836
AlwNI CAGNNNCTG 1 cut(s) 182
Ama87I CYCGRG 1 cut(s) 495
Aor13HI TCCGGA 2 cut(s) 48, 1336
AoxI GGCC 5 cut(s) 57, 168, 370, 454, 622
ApoI RAATTY 3 cut(s) 504, 545, 1124
AspLEI GCGC 4 cut(s) 156, 576, 949, 999
AspS9I GGNCC 3 cut(s) 382, 455, 728
AsuC2I CCSGG 2 cut(s) 598, 732
AsuHPI GGTGA 6 cut(s) 138, 151, 497, 590, 788, 1682
AvaI CYCGRG 1 cut(s) 495
AvaII GGWCC 2 cut(s) 382, 728
BalI TGGCCA 2 cut(s) 59, 624
BamHI GGATCC 3 cut(s) 256, 1249, 1398
BanII GRGCYC 4 cut(s) 39, 496, 1167, 1714
Bbv12I GWGCWC 4 cut(s) 39, 496, 1167, 1714
BccI CCATC 3 cut(s) 51, 1153, 1506
BceAI ACGGC 2 cut(s) 7, 225
BciT130I CCWGG 7 cut(s) 459, 606, 742, 773, 800, 847, 1545
BciVI GTATCC 1 cut(s) 1592
BclI TGATCA 1 cut(s) 1450
BcnI CCSGG 2 cut(s) 598, 732
BcoDI GTCTC 2 cut(s) 674, 836
BfaI CTAG 4 cut(s) 513, 1028, 1848, 1858
BfuI GTATCC 1 cut(s) 1592
BisI GCNGC 2 cut(s) 137, 180
BlsI GCNGC 2 cut(s) 138, 181
Bme1390I CCNGG 9 cut(s) 459, 598, 606, 732, 742, 773, 800, 847, 1545
Bme18I GGWCC 2 cut(s) 382, 728
BmeT110I CYCGRG 1 cut(s) 495
BmgBI CACGTC 1 cut(s) 174
BmgT120I GGNCC 3 cut(s) 382, 455, 728
BmiI GGNNCC 5 cut(s) 258, 729, 730, 1251, 1400
BmrFI CCNGG 9 cut(s) 459, 598, 606, 732, 742, 773, 800, 847, 1545
BmsI GCATC 5 cut(s) 81, 406, 669, 973, 1540
BoxI GACNNNNGTC 1 cut(s) 203
BpuEI CTTGAG 3 cut(s) 362, 422, 1637
BpuMI CCSGG 2 cut(s) 598, 732
Bsa29I ATCGAT 1 cut(s) 1534
BsaBI GATNNNNATC 1 cut(s) 1248
BsaHI GRCGYC 1 cut(s) 736
BsaI GGTCTC 1 cut(s) 836
BsaJI CCNNGG 4 cut(s) 420, 457, 458, 740
BsaWI WCCGGW 3 cut(s) 48, 1336, 1667
BsaXI ACNNNNNCTCC 2 cut(s) 654, 684
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 379, 391, 459, 1736, 1739
Bse1I ACTGG 1 cut(s) 102
Bse3DI GCAATG 4 cut(s) 291, 999, 1475, 1689
Bse8I GATNNNNATC 1 cut(s) 1248
BseAI TCCGGA 2 cut(s) 48, 1336
BseBI CCWGG 7 cut(s) 459, 606, 742, 773, 800, 847, 1545
BseCI ATCGAT 1 cut(s) 1534
BseDI CCNNGG 4 cut(s) 420, 457, 458, 740
BseGI GGATG 3 cut(s) 1498, 1699, 1806
BseJI GATNNNNATC 1 cut(s) 1248
BseLI CCNNNNNNNGG 6 cut(s) 55, 379, 391, 459, 1736, 1739
BseMI GCAATG 4 cut(s) 291, 999, 1475, 1689
BseMII CTCAG 5 cut(s) 84, 174, 1098, 1161, 1494
BseNI ACTGG 1 cut(s) 102
BseRI GAGGAG 2 cut(s) 114, 365
BseYI CCCAGC 2 cut(s) 68, 1853
Bsh1236I CGCG 5 cut(s) 154, 576, 949, 1050, 1382
BshFI GGCC 5 cut(s) 59, 170, 372, 456, 624
BshVI ATCGAT 1 cut(s) 1534
BsiHKAI GWGCWC 4 cut(s) 39, 496, 1167, 1714
BsiHKCI CYCGRG 1 cut(s) 495
BsiSI CCGG 6 cut(s) 49, 453, 597, 732, 1337, 1668
BslFI GGGAC 2 cut(s) 714, 723
BslI CCNNNNNNNGG 6 cut(s) 55, 379, 391, 459, 1736, 1739
BsmAI GTCTC 2 cut(s) 674, 836
BsmFI GGGAC 2 cut(s) 714, 723
BsnI GGCC 5 cut(s) 59, 170, 372, 456, 624
Bso31I GGTCTC 1 cut(s) 836
BsoBI CYCGRG 1 cut(s) 495
Bsp1286I GDGCHC 4 cut(s) 39, 496, 1167, 1714
Bsp13I TCCGGA 2 cut(s) 48, 1336
BspACI CCGC 8 cut(s) 5, 40, 134, 137, 152, 180, 576, 1762
BspANI GGCC 5 cut(s) 59, 170, 372, 456, 624
BspCNI CTCAG 5 cut(s) 85, 175, 1099, 1162, 1495
BspDI ATCGAT 1 cut(s) 1534
BspEI TCCGGA 2 cut(s) 48, 1336
BspFNI CGCG 5 cut(s) 154, 576, 949, 1050, 1382
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 5 cut(s) 258, 729, 730, 1251, 1400
BspQI GCTCTTC 2 cut(s) 27, 1458
BspTNI GGTCTC 1 cut(s) 836
BsrDI GCAATG 4 cut(s) 291, 999, 1475, 1689
BsrI ACTGG 1 cut(s) 102
BssECI CCNNGG 4 cut(s) 420, 457, 458, 740
BssNI GRCGYC 1 cut(s) 736
BssT1I CCWWGG 1 cut(s) 420
Bst2UI CCWGG 7 cut(s) 459, 606, 742, 773, 800, 847, 1545
Bst4CI ACNGT 4 cut(s) 688, 761, 1071, 1367
Bst6I CTCTTC 3 cut(s) 27, 1352, 1458
BstACI GRCGYC 1 cut(s) 736
BstC8I GCNNGC 3 cut(s) 520, 1384, 1580
BstDEI CTNAG 6 cut(s) 93, 183, 658, 1107, 1170, 1503
BstENI CCTNNNNNAGG 2 cut(s) 377, 1734
BstF5I GGATG 3 cut(s) 1498, 1699, 1806
BstFNI CGCG 5 cut(s) 154, 576, 949, 1050, 1382
BstHHI GCGC 4 cut(s) 156, 576, 949, 999
BstMAI GTCTC 2 cut(s) 674, 836
BstMWI GCNNNNNNNGC 5 cut(s) 176, 188, 630, 938, 1761
BstNI CCWGG 7 cut(s) 459, 606, 742, 773, 800, 847, 1545
BstNSI RCATGY 2 cut(s) 985, 997
BstPAI GACNNNNGTC 1 cut(s) 203
BstSCI CCNGG 9 cut(s) 457, 596, 604, 730, 740, 771, 798, 845, 1543
BstUI CGCG 5 cut(s) 154, 576, 949, 1050, 1382
BstX2I RGATCY 6 cut(s) 256, 446, 555, 1249, 1342, 1398
BstYI RGATCY 6 cut(s) 256, 446, 555, 1249, 1342, 1398
Bsu15I ATCGAT 1 cut(s) 1534
BsuI GTATCC 1 cut(s) 1592
BsuRI GGCC 5 cut(s) 59, 170, 372, 456, 624
BsuTUI ATCGAT 1 cut(s) 1534
BtrI CACGTC 1 cut(s) 174
BtsCI GGATG 3 cut(s) 1498, 1699, 1806
BtsIMutI CAGTG 4 cut(s) 1167, 1357, 1372, 1602
Cac8I GCNNGC 3 cut(s) 520, 1384, 1580
CaiI CAGNNNCTG 1 cut(s) 182
CciI TCATGA 1 cut(s) 435
CfoI GCGC 4 cut(s) 156, 576, 949, 999
Cfr13I GGNCC 3 cut(s) 382, 455, 728
ClaI ATCGAT 1 cut(s) 1534
CseI GACGC 3 cut(s) 782, 938, 970
Csp6I GTAC 2 cut(s) 25, 500
CviQI GTAC 2 cut(s) 25, 500
DdeI CTNAG 6 cut(s) 93, 183, 658, 1107, 1170, 1503
DraI TTTAAA 1 cut(s) 765
EaeI YGGCCR 2 cut(s) 57, 622
Eam1104I CTCTTC 3 cut(s) 27, 1352, 1458
EarI CTCTTC 3 cut(s) 27, 1352, 1458
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 4 cut(s) 37, 494, 1165, 1712
Eco130I CCWWGG 1 cut(s) 420
Eco147I AGGCCT 1 cut(s) 372
Eco24I GRGCYC 4 cut(s) 39, 496, 1167, 1714
Eco31I GGTCTC 1 cut(s) 836
Eco47I GGWCC 2 cut(s) 382, 728
Eco53kI GAGCTC 4 cut(s) 37, 494, 1165, 1712
Eco57I CTGAAG 5 cut(s) 729, 738, 1333, 1394, 1827
Eco88I CYCGRG 1 cut(s) 495
EcoICRI GAGCTC 4 cut(s) 37, 494, 1165, 1712
EcoNI CCTNNNNNAGG 2 cut(s) 377, 1734
EcoO109I RGGNCCY 1 cut(s) 728
EcoRI GAATTC 1 cut(s) 1124
EcoRII CCWGG 7 cut(s) 457, 604, 740, 771, 798, 845, 1543
EcoT14I CCWWGG 1 cut(s) 420
EcoT38I GRGCYC 4 cut(s) 39, 496, 1167, 1714
ErhI CCWWGG 1 cut(s) 420
FaqI GGGAC 2 cut(s) 714, 723
FbaI TGATCA 1 cut(s) 1450
Fnu4HI GCNGC 2 cut(s) 137, 180
FokI GGATG 3 cut(s) 1485, 1706, 1793
FriOI GRGCYC 4 cut(s) 39, 496, 1167, 1714
Fsp4HI GCNGC 2 cut(s) 137, 180
FspAI RTGCGCAY 1 cut(s) 998
FspBI CTAG 4 cut(s) 513, 1028, 1848, 1858
FspI TGCGCA 1 cut(s) 998
GlaI GCGC 4 cut(s) 155, 575, 948, 998
GluI GCNGC 2 cut(s) 137, 180
GsaI CCCAGC 2 cut(s) 72, 1857
HaeIII GGCC 5 cut(s) 59, 170, 372, 456, 624
HapII CCGG 6 cut(s) 49, 453, 597, 732, 1337, 1668
HgaI GACGC 3 cut(s) 782, 938, 970
HhaI GCGC 4 cut(s) 156, 576, 949, 999
Hin1I GRCGYC 1 cut(s) 736
Hin6I GCGC 4 cut(s) 154, 574, 947, 997
HinP1I GCGC 4 cut(s) 154, 574, 947, 997
HindIII AAGCTT 1 cut(s) 1442
HinfI GANTC 8 cut(s) 14, 323, 416, 745, 1477, 1513, 1638, 1784
HpaII CCGG 6 cut(s) 49, 453, 597, 732, 1337, 1668
HphI GGTGA 6 cut(s) 138, 151, 497, 590, 788, 1682
Hpy166II GTNNAC 2 cut(s) 1409, 1792
Hpy188I TCNGA 7 cut(s) 94, 261, 529, 544, 1095, 1283, 1374
Hpy8I GTNNAC 2 cut(s) 1409, 1792
Hpy99I CGWCG 1 cut(s) 265
HpyAV CCTTC 7 cut(s) 181, 352, 362, 1369, 1691, 1822, 1851
HpyCH4III ACNGT 4 cut(s) 688, 761, 1071, 1367
HpyCH4IV ACGT 3 cut(s) 173, 736, 829
HpyCH4V TGCA 7 cut(s) 397, 641, 985, 1004, 1142, 1319, 1386
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 188, 630, 938, 1761
HpyF3I CTNAG 6 cut(s) 93, 183, 658, 1107, 1170, 1503
HpySE526I ACGT 3 cut(s) 173, 736, 829
Hsp92I GRCGYC 1 cut(s) 736
HspAI GCGC 4 cut(s) 154, 574, 947, 997
KflI GGGWCCC 1 cut(s) 728
Kpn2I TCCGGA 2 cut(s) 48, 1336
Ksp22I TGATCA 1 cut(s) 1450
LguI GCTCTTC 2 cut(s) 27, 1458
LmnI GCTCC 4 cut(s) 42, 51, 938, 1162
LweI GCATC 5 cut(s) 81, 406, 669, 973, 1540
MaeI CTAG 4 cut(s) 513, 1028, 1848, 1858
MaeII ACGT 3 cut(s) 173, 736, 829
MaeIII GTNAC 5 cut(s) 205, 409, 578, 592, 794
MboII GAAGA 8 cut(s) 44, 135, 257, 722, 731, 872, 1339, 1475
MfeI CAATTG 1 cut(s) 1254
MflI RGATCY 6 cut(s) 256, 446, 555, 1249, 1342, 1398
MhlI GDGCHC 4 cut(s) 39, 496, 1167, 1714
MlsI TGGCCA 2 cut(s) 59, 624
MluI ACGCGT 1 cut(s) 1048
MluNI TGGCCA 2 cut(s) 59, 624
MlyI GAGTC 1 cut(s) 1522
MmeI TCCRAC 4 cut(s) 284, 1505, 1651, 1757
Mox20I TGGCCA 2 cut(s) 59, 624
MroI TCCGGA 2 cut(s) 48, 1336
MscI TGGCCA 2 cut(s) 59, 624
MseI TTAA 8 cut(s) 552, 588, 764, 806, 1020, 1307, 1778, 1797
MslI CAYNNNNRTG 3 cut(s) 564, 969, 1233
Msp20I TGGCCA 2 cut(s) 59, 624
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 6 cut(s) 49, 453, 597, 732, 1337, 1668
MspR9I CCNGG 9 cut(s) 459, 598, 606, 732, 742, 773, 800, 847, 1545
MunI CAATTG 1 cut(s) 1254
MvaI CCWGG 7 cut(s) 459, 606, 742, 773, 800, 847, 1545
MvnI CGCG 5 cut(s) 154, 576, 949, 1050, 1382
MwoI GCNNNNNNNGC 5 cut(s) 176, 188, 630, 938, 1761
NciI CCSGG 2 cut(s) 598, 732
NlaIV GGNNCC 5 cut(s) 258, 729, 730, 1251, 1400
NmuCI GTSAC 5 cut(s) 205, 409, 578, 592, 794
NsbI TGCGCA 1 cut(s) 998
NspI RCATGY 2 cut(s) 985, 997
PaeR7I CTCGAG 1 cut(s) 495
PagI TCATGA 1 cut(s) 435
PasI CCCWGGG 1 cut(s) 458
PceI AGGCCT 1 cut(s) 372
PciSI GCTCTTC 2 cut(s) 27, 1458
PcsI WCGNNNNNNNCGW 2 cut(s) 215, 895
PfeI GAWTC 7 cut(s) 14, 323, 416, 745, 1477, 1638, 1784
PflMI CCANNNNNTGG 1 cut(s) 1739
PfoI TCCNGGA 1 cut(s) 730
PkrI GCNGC 2 cut(s) 138, 181
PleI GAGTC 1 cut(s) 1521
PpsI GAGTC 1 cut(s) 1521
PpuMI RGGWCCY 1 cut(s) 728
PshAI GACNNNNGTC 1 cut(s) 203
PsiI TTATAA 1 cut(s) 1490
Psp124BI GAGCTC 4 cut(s) 39, 496, 1167, 1714
Psp5II RGGWCCY 1 cut(s) 728
Psp6I CCWGG 7 cut(s) 457, 604, 740, 771, 798, 845, 1543
PspFI CCCAGC 2 cut(s) 68, 1853
PspGI CCWGG 7 cut(s) 457, 604, 740, 771, 798, 845, 1543
PspN4I GGNNCC 5 cut(s) 258, 729, 730, 1251, 1400
PspPI GGNCC 3 cut(s) 382, 455, 728
PspPPI RGGWCCY 1 cut(s) 728
PspXI VCTCGAGB 1 cut(s) 495
PstNI CAGNNNCTG 1 cut(s) 182
PsuI RGATCY 6 cut(s) 256, 446, 555, 1249, 1342, 1398
RsaI GTAC 2 cut(s) 26, 501
RsaNI GTAC 2 cut(s) 25, 500
RseI CAYNNNNRTG 3 cut(s) 564, 969, 1233
SacI GAGCTC 4 cut(s) 39, 496, 1167, 1714
SapI GCTCTTC 2 cut(s) 27, 1458
SaqAI TTAA 8 cut(s) 552, 588, 764, 806, 1020, 1307, 1778, 1797
SatI GCNGC 2 cut(s) 137, 180
Sau96I GGNCC 3 cut(s) 382, 455, 728
SchI GAGTC 1 cut(s) 1522
ScrFI CCNGG 9 cut(s) 459, 598, 606, 732, 742, 773, 800, 847, 1545
SduI GDGCHC 4 cut(s) 39, 496, 1167, 1714
SfaNI GCATC 5 cut(s) 81, 406, 669, 973, 1540
Sfr274I CTCGAG 1 cut(s) 495
SinI GGWCC 2 cut(s) 382, 728
SlaI CTCGAG 1 cut(s) 495
SmiMI CAYNNNNRTG 3 cut(s) 564, 969, 1233
SmlI CTYRAG 4 cut(s) 377, 401, 495, 1652
SmoI CTYRAG 4 cut(s) 377, 401, 495, 1652
SseBI AGGCCT 1 cut(s) 372
SsiI CCGC 8 cut(s) 5, 40, 134, 137, 152, 180, 576, 1762
SspI AATATT 1 cut(s) 918
SspMI CTAG 4 cut(s) 513, 1028, 1848, 1858
SstI GAGCTC 4 cut(s) 39, 496, 1167, 1714
StuI AGGCCT 1 cut(s) 372
StyD4I CCNGG 9 cut(s) 457, 596, 604, 730, 740, 771, 798, 845, 1543
StyI CCWWGG 1 cut(s) 420
TaaI ACNGT 4 cut(s) 688, 761, 1071, 1367
TaiI ACGT 3 cut(s) 176, 739, 832
TaqI TCGA 3 cut(s) 490, 496, 1534
TatI WGTACW 1 cut(s) 499
TauI GCSGC 2 cut(s) 139, 182
TfiI GAWTC 7 cut(s) 14, 323, 416, 745, 1477, 1638, 1784
Tru1I TTAA 8 cut(s) 552, 588, 764, 806, 1020, 1307, 1778, 1797
Tru9I TTAA 8 cut(s) 552, 588, 764, 806, 1020, 1307, 1778, 1797
TscAI CASTG 4 cut(s) 1174, 1357, 1372, 1609
TseFI GTSAC 5 cut(s) 205, 409, 578, 592, 794
Tsp45I GTSAC 5 cut(s) 205, 409, 578, 592, 794
TspGWI ACGGA 2 cut(s) 887, 1300
TspRI CASTG 4 cut(s) 1174, 1357, 1372, 1609
Van91I CCANNNNNTGG 1 cut(s) 1739
VpaK11BI GGWCC 2 cut(s) 382, 728
XagI CCTNNNNNAGG 2 cut(s) 377, 1734
XapI RAATTY 3 cut(s) 504, 545, 1124
XceI RCATGY 2 cut(s) 985, 997
XcmI CCANNNNNNNNNTGG 2 cut(s) 25, 1524
XhoI CTCGAG 1 cut(s) 495
XspI CTAG 4 cut(s) 513, 1028, 1848, 1858
ZraI GACGTC 1 cut(s) 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.