No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30880 AT1G30880 |
| fragaria_vesca | FvH4_3g13200 |
| malus_domestica | MD10G1226000.v1.1 |
| prunus_persica | Prupe.4G119300_v2.0.a1 |
| pyrus_communis | pycom05g22080 pycom10g18990 |
| rosa_chinensis | RchiOBHm_Chr5g0021541 |
| rosa_laevigata | RLG00000032613 |
| rosa_multiflora | Rmu_sc0002052.1_g000012 Rmu_sc0023070.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00057110 |
| rosa_rugosa | Rorug02G0284200 Rorug05G0067100 |
| rosa_samantha | Rh5AG156400 Rh5BG155900 Rh5CG169700 Rh5CG170100 Rh5DG156200 Rh5DG156300 |
| rosa_wichuraiana | Rw5G013920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 102, 123, 351 |
| AclWI | GGATC | 1 cut(s) | 182 |
| AcyI | GRCGYC | 2 cut(s) | 319, 367 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 269 |
| AgsI | TTSAA | 1 cut(s) | 301 |
| AluBI | AGCT | 3 cut(s) | 97, 113, 133 |
| AluI | AGCT | 3 cut(s) | 97, 113, 133 |
| AlwI | GGATC | 1 cut(s) | 182 |
| AoxI | GGCC | 3 cut(s) | 90, 143, 156 |
| ApeKI | GCWGC | 2 cut(s) | 113, 133 |
| AspS9I | GGNCC | 1 cut(s) | 144 |
| BanII | GRGCYC | 1 cut(s) | 69 |
| BbvI | GCAGC | 2 cut(s) | 100, 120 |
| BccI | CCATC | 3 cut(s) | 52, 220, 227 |
| BceAI | ACGGC | 1 cut(s) | 247 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 142 |
| BisI | GCNGC | 4 cut(s) | 102, 114, 123, 134 |
| BlsI | GCNGC | 4 cut(s) | 103, 115, 124, 135 |
| BmgT120I | GGNCC | 1 cut(s) | 144 |
| BmsI | GCATC | 1 cut(s) | 8 |
| Bpu10I | CCTNAGC | 1 cut(s) | 129 |
| BsaHI | GRCGYC | 2 cut(s) | 319, 367 |
| BsaJI | CCNNGG | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 269 |
| Bse3DI | GCAATG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BseMI | GCAATG | 1 cut(s) | 334 |
| BseRI | GAGGAG | 1 cut(s) | 151 |
| BseXI | GCAGC | 2 cut(s) | 100, 120 |
| BshFI | GGCC | 3 cut(s) | 92, 145, 158 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BsnI | GGCC | 3 cut(s) | 92, 145, 158 |
| Bsp1286I | GDGCHC | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 174 |
| Bsp19I | CCATGG | 1 cut(s) | 213 |
| BspACI | CCGC | 3 cut(s) | 102, 123, 351 |
| BspANI | GGCC | 3 cut(s) | 92, 145, 158 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BsrDI | GCAATG | 1 cut(s) | 334 |
| BssECI | CCNNGG | 1 cut(s) | 213 |
| BssMI | GATC | 1 cut(s) | 174 |
| BssNI | GRCGYC | 2 cut(s) | 319, 367 |
| BssT1I | CCWWGG | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 3 cut(s) | 26, 154, 169 |
| BstACI | GRCGYC | 2 cut(s) | 319, 367 |
| BstC8I | GCNNGC | 1 cut(s) | 99 |
| BstDEI | CTNAG | 2 cut(s) | 129, 153 |
| BstDSI | CCRYGG | 1 cut(s) | 213 |
| BstKTI | GATC | 1 cut(s) | 177 |
| BstMBI | GATC | 1 cut(s) | 174 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 98, 110, 119, 122, 142 |
| BstV1I | GCAGC | 2 cut(s) | 100, 120 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 220 |
| BsuRI | GGCC | 3 cut(s) | 92, 145, 158 |
| BtgI | CCRYGG | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 1 cut(s) | 144 |
| CseI | GACGC | 2 cut(s) | 308, 356 |
| CviAII | CATG | 2 cut(s) | 214, 323 |
| DdeI | CTNAG | 2 cut(s) | 129, 153 |
| DpnI | GATC | 1 cut(s) | 176 |
| DpnII | GATC | 1 cut(s) | 174 |
| Eam1104I | CTCTTC | 3 cut(s) | 26, 154, 169 |
| EarI | CTCTTC | 3 cut(s) | 26, 154, 169 |
| EciI | GGCGGA | 1 cut(s) | 366 |
| Eco130I | CCWWGG | 1 cut(s) | 213 |
| Eco147I | AGGCCT | 1 cut(s) | 158 |
| Eco24I | GRGCYC | 1 cut(s) | 69 |
| EcoO109I | RGGNCCY | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 1 cut(s) | 213 |
| EcoT38I | GRGCYC | 1 cut(s) | 69 |
| ErhI | CCWWGG | 1 cut(s) | 213 |
| FaeI | CATG | 2 cut(s) | 217, 326 |
| FaiI | YATR | 4 cut(s) | 170, 215, 324, 372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 133, 165 |
| FatI | CATG | 2 cut(s) | 213, 322 |
| Fnu4HI | GCNGC | 4 cut(s) | 102, 114, 123, 134 |
| FriOI | GRGCYC | 1 cut(s) | 69 |
| Fsp4HI | GCNGC | 4 cut(s) | 102, 114, 123, 134 |
| GluI | GCNGC | 4 cut(s) | 102, 114, 123, 134 |
| HaeIII | GGCC | 3 cut(s) | 92, 145, 158 |
| HgaI | GACGC | 2 cut(s) | 308, 356 |
| Hin1I | GRCGYC | 2 cut(s) | 319, 367 |
| Hin1II | CATG | 2 cut(s) | 217, 326 |
| HincII | GTYRAC | 1 cut(s) | 187 |
| HindII | GTYRAC | 1 cut(s) | 187 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 243 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyAV | CCTTC | 2 cut(s) | 210, 309 |
| HpyCH4V | TGCA | 1 cut(s) | 21 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 98, 110, 119, 122, 142 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 153 |
| Hsp92I | GRCGYC | 2 cut(s) | 319, 367 |
| Hsp92II | CATG | 2 cut(s) | 217, 326 |
| Kzo9I | GATC | 1 cut(s) | 174 |
| Lsp1109I | GCAGC | 2 cut(s) | 100, 120 |
| LweI | GCATC | 1 cut(s) | 8 |
| MalI | GATC | 1 cut(s) | 176 |
| MboI | GATC | 1 cut(s) | 174 |
| MboII | GAAGA | 4 cut(s) | 43, 91, 141, 156 |
| MhlI | GDGCHC | 1 cut(s) | 69 |
| MnlI | CCTC | 8 cut(s) | 27, 82, 128, 157, 169, 172, 202, 357 |
| MseI | TTAA | 2 cut(s) | 257, 360 |
| MslI | CAYNNNNRTG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 98, 110, 119, 122, 142 |
| NcoI | CCATGG | 1 cut(s) | 213 |
| NdeII | GATC | 1 cut(s) | 174 |
| NlaIII | CATG | 2 cut(s) | 217, 326 |
| PceI | AGGCCT | 1 cut(s) | 158 |
| PkrI | GCNGC | 4 cut(s) | 103, 115, 124, 135 |
| PspPI | GGNCC | 1 cut(s) | 144 |
| RseI | CAYNNNNRTG | 1 cut(s) | 327 |
| SaqAI | TTAA | 2 cut(s) | 257, 360 |
| SatI | GCNGC | 4 cut(s) | 102, 114, 123, 134 |
| Sau3AI | GATC | 1 cut(s) | 174 |
| Sau96I | GGNCC | 1 cut(s) | 144 |
| SduI | GDGCHC | 1 cut(s) | 69 |
| SetI | ASST | 7 cut(s) | 99, 115, 135, 194, 306, 339, 360 |
| SfaNI | GCATC | 1 cut(s) | 8 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 327 |
| SseBI | AGGCCT | 1 cut(s) | 158 |
| SsiI | CCGC | 3 cut(s) | 102, 123, 351 |
| StuI | AGGCCT | 1 cut(s) | 158 |
| StyI | CCWWGG | 1 cut(s) | 213 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TauI | GCSGC | 2 cut(s) | 104, 125 |
| Tru1I | TTAA | 2 cut(s) | 257, 360 |
| Tru9I | TTAA | 2 cut(s) | 257, 360 |
| TseI | GCWGC | 2 cut(s) | 113, 133 |
| TspDTI | ATGAA | 1 cut(s) | 243 |