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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30880 AT1G30880 |
| fragaria_vesca | FvH4_3g13200 |
| malus_domestica | MD10G1226000.v1.1 |
| prunus_persica | Prupe.4G119300_v2.0.a1 |
| pyrus_communis | pycom05g22080 pycom10g18990 |
| rosa_chinensis | RchiOBHm_Chr5g0021541 |
| rosa_laevigata | RLG00000032613 |
| rosa_multiflora | Rmu_sc0002052.1_g000012 Rmu_sc0023070.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00057110 |
| rosa_rugosa | Rorug02G0284200 Rorug05G0067100 |
| rosa_samantha | Rh5AG156400 Rh5BG155900 Rh5CG169700 Rh5CG170100 Rh5DG156200 Rh5DG156300 |
| rosa_wichuraiana | Rw5G013920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 835, 976 |
| AccB1I | GGYRCC | 2 cut(s) | 13, 522 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 532 |
| AccIII | TCCGGA | 1 cut(s) | 946 |
| AciI | CCGC | 1 cut(s) | 236 |
| AclWI | GGATC | 3 cut(s) | 743, 938, 1334 |
| AcsI | RAATTY | 2 cut(s) | 268, 1010 |
| AcuI | CTGAAG | 1 cut(s) | 471 |
| AfaI | GTAC | 2 cut(s) | 245, 306 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 23, 532 |
| AgsI | TTSAA | 5 cut(s) | 423, 477, 602, 889, 1232 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 163 |
| AjnI | CCWGG | 2 cut(s) | 571, 751 |
| AluBI | AGCT | 4 cut(s) | 605, 836, 896, 992 |
| AluI | AGCT | 4 cut(s) | 605, 836, 896, 992 |
| Alw26I | GTCTC | 1 cut(s) | 570 |
| AlwI | GGATC | 3 cut(s) | 743, 938, 1334 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 173 |
| Aor13HI | TCCGGA | 1 cut(s) | 946 |
| ApeKI | GCWGC | 3 cut(s) | 549, 1088, 1213 |
| ApoI | RAATTY | 2 cut(s) | 268, 1010 |
| AseI | ATTAAT | 1 cut(s) | 975 |
| AspS9I | GGNCC | 3 cut(s) | 346, 851, 965 |
| AsuHPI | GGTGA | 5 cut(s) | 50, 674, 693, 734, 749 |
| AvaII | GGWCC | 3 cut(s) | 346, 851, 965 |
| BaeGI | GKGCMC | 1 cut(s) | 877 |
| BanI | GGYRCC | 2 cut(s) | 13, 522 |
| BbvCI | CCTCAGC | 1 cut(s) | 993 |
| BbvI | GCAGC | 3 cut(s) | 561, 1100, 1225 |
| BccI | CCATC | 4 cut(s) | 713, 808, 1109, 1113 |
| BciT130I | CCWGG | 2 cut(s) | 573, 753 |
| BciVI | GTATCC | 1 cut(s) | 786 |
| BclI | TGATCA | 4 cut(s) | 321, 337, 361, 766 |
| BcoDI | GTCTC | 1 cut(s) | 570 |
| BfaI | CTAG | 1 cut(s) | 636 |
| BfuAI | ACCTGC | 2 cut(s) | 835, 976 |
| BfuI | GTATCC | 1 cut(s) | 786 |
| BisI | GCNGC | 3 cut(s) | 550, 1089, 1214 |
| BlsI | GCNGC | 3 cut(s) | 551, 1090, 1215 |
| Bme1390I | CCNGG | 2 cut(s) | 573, 753 |
| Bme18I | GGWCC | 3 cut(s) | 346, 851, 965 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 3 cut(s) | 346, 851, 965 |
| BmiI | GGNNCC | 2 cut(s) | 15, 524 |
| BmrFI | CCNGG | 2 cut(s) | 573, 753 |
| BmsI | GCATC | 5 cut(s) | 172, 241, 358, 566, 1200 |
| BpmI | CTGGAG | 1 cut(s) | 594 |
| Bpu10I | CCTNAGC | 2 cut(s) | 199, 993 |
| BpuEI | CTTGAG | 1 cut(s) | 665 |
| BsaWI | WCCGGW | 1 cut(s) | 946 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 23, 532 |
| Bse1I | ACTGG | 1 cut(s) | 183 |
| Bse3DI | GCAATG | 1 cut(s) | 192 |
| BseAI | TCCGGA | 1 cut(s) | 946 |
| BseBI | CCWGG | 2 cut(s) | 573, 753 |
| BseGI | GGATG | 5 cut(s) | 10, 187, 219, 769, 1124 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 23, 532 |
| BseMI | GCAATG | 1 cut(s) | 192 |
| BseMII | CTCAG | 3 cut(s) | 363, 813, 984 |
| BseNI | ACTGG | 1 cut(s) | 183 |
| BseRI | GAGGAG | 1 cut(s) | 662 |
| BseSI | GKGCMC | 1 cut(s) | 877 |
| BseXI | GCAGC | 3 cut(s) | 561, 1100, 1225 |
| BshNI | GGYRCC | 2 cut(s) | 13, 522 |
| BsiSI | CCGG | 2 cut(s) | 947, 1357 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 23, 532 |
| BsmAI | GTCTC | 1 cut(s) | 570 |
| Bsp1286I | GDGCHC | 1 cut(s) | 877 |
| Bsp13I | TCCGGA | 1 cut(s) | 946 |
| Bsp143I | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| BspACI | CCGC | 1 cut(s) | 236 |
| BspCNI | CTCAG | 3 cut(s) | 364, 814, 985 |
| BspEI | TCCGGA | 1 cut(s) | 946 |
| BspHI | TCATGA | 1 cut(s) | 364 |
| BspLI | GGNNCC | 2 cut(s) | 15, 524 |
| BspMI | ACCTGC | 2 cut(s) | 835, 976 |
| BspPI | GGATC | 3 cut(s) | 743, 938, 1334 |
| BspT107I | GGYRCC | 2 cut(s) | 13, 522 |
| BsrDI | GCAATG | 1 cut(s) | 192 |
| BsrI | ACTGG | 1 cut(s) | 183 |
| BssMI | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| Bst2UI | CCWGG | 2 cut(s) | 573, 753 |
| Bst4CI | ACNGT | 4 cut(s) | 76, 149, 662, 1354 |
| BstC8I | GCNNGC | 1 cut(s) | 538 |
| BstDEI | CTNAG | 6 cut(s) | 199, 301, 372, 822, 993, 1206 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 21 |
| BstF5I | GGATG | 5 cut(s) | 10, 187, 219, 769, 1124 |
| BstKTI | GATC | 7 cut(s) | 324, 340, 364, 751, 769, 946, 1329 |
| BstMAI | GTCTC | 1 cut(s) | 570 |
| BstMBI | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 546, 902 |
| BstNI | CCWGG | 2 cut(s) | 573, 753 |
| BstNSI | RCATGY | 1 cut(s) | 635 |
| BstSCI | CCNGG | 2 cut(s) | 571, 751 |
| BstSLI | GKGCMC | 1 cut(s) | 877 |
| BstV1I | GCAGC | 3 cut(s) | 561, 1100, 1225 |
| BsuI | GTATCC | 1 cut(s) | 786 |
| BtsCI | GGATG | 5 cut(s) | 10, 187, 219, 769, 1124 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| BveI | ACCTGC | 2 cut(s) | 835, 976 |
| Cac8I | GCNNGC | 1 cut(s) | 538 |
| CaiI | CAGNNNCTG | 1 cut(s) | 173 |
| CciI | TCATGA | 1 cut(s) | 364 |
| Cfr13I | GGNCC | 3 cut(s) | 346, 851, 965 |
| Csp6I | GTAC | 2 cut(s) | 244, 305 |
| CviAII | CATG | 9 cut(s) | 89, 365, 403, 527, 632, 707, 1030, 1217, 1285 |
| CviJI | RGCY | 9 cut(s) | 494, 605, 698, 836, 896, 992, 1129, 1175, 1360 |
| CviKI_1 | RGCY | 9 cut(s) | 494, 605, 698, 836, 896, 992, 1129, 1175, 1360 |
| CviQI | GTAC | 2 cut(s) | 244, 305 |
| DdeI | CTNAG | 6 cut(s) | 199, 301, 372, 822, 993, 1206 |
| DpnI | GATC | 7 cut(s) | 323, 339, 363, 750, 768, 945, 1328 |
| DpnII | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| DriI | GACNNNNNGTC | 1 cut(s) | 163 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 163 |
| Eco32I | GATATC | 1 cut(s) | 1078 |
| Eco47I | GGWCC | 3 cut(s) | 346, 851, 965 |
| Eco57I | CTGAAG | 1 cut(s) | 471 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 21 |
| EcoO109I | RGGNCCY | 1 cut(s) | 965 |
| EcoRII | CCWGG | 2 cut(s) | 571, 751 |
| EcoRV | GATATC | 1 cut(s) | 1078 |
| FaeI | CATG | 9 cut(s) | 92, 368, 406, 530, 635, 710, 1033, 1220, 1288 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 885, 917 |
| FatI | CATG | 9 cut(s) | 88, 364, 402, 526, 631, 706, 1029, 1216, 1284 |
| FauI | CCCGC | 1 cut(s) | 229 |
| FauNDI | CATATG | 1 cut(s) | 1189 |
| FbaI | TGATCA | 4 cut(s) | 321, 337, 361, 766 |
| Fnu4HI | GCNGC | 3 cut(s) | 550, 1089, 1214 |
| FokI | GGATG | 5 cut(s) | 17, 194, 226, 776, 1131 |
| Fsp4HI | GCNGC | 3 cut(s) | 550, 1089, 1214 |
| FspBI | CTAG | 1 cut(s) | 636 |
| GluI | GCNGC | 3 cut(s) | 550, 1089, 1214 |
| GsuI | CTGGAG | 1 cut(s) | 594 |
| HapII | CCGG | 2 cut(s) | 947, 1357 |
| Hin1II | CATG | 9 cut(s) | 92, 368, 406, 530, 635, 710, 1033, 1220, 1288 |
| HincII | GTYRAC | 2 cut(s) | 658, 1350 |
| HindII | GTYRAC | 2 cut(s) | 658, 1350 |
| HinfI | GANTC | 2 cut(s) | 1036, 1269 |
| HpaII | CCGG | 2 cut(s) | 947, 1357 |
| HphI | GGTGA | 5 cut(s) | 50, 674, 693, 734, 749 |
| Hpy166II | GTNNAC | 2 cut(s) | 658, 1350 |
| Hpy188I | TCNGA | 6 cut(s) | 274, 619, 864, 982, 1075, 1309 |
| Hpy188III | TCNNGA | 3 cut(s) | 365, 947, 1237 |
| Hpy8I | GTNNAC | 2 cut(s) | 658, 1350 |
| HpyAV | CCTTC | 4 cut(s) | 483, 484, 676, 1118 |
| HpyCH4III | ACNGT | 4 cut(s) | 76, 149, 662, 1354 |
| HpyCH4V | TGCA | 4 cut(s) | 185, 905, 1213, 1284 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 546, 902 |
| HpyF3I | CTNAG | 6 cut(s) | 199, 301, 372, 822, 993, 1206 |
| Hsp92II | CATG | 9 cut(s) | 92, 368, 406, 530, 635, 710, 1033, 1220, 1288 |
| Kpn2I | TCCGGA | 1 cut(s) | 946 |
| Ksp22I | TGATCA | 4 cut(s) | 321, 337, 361, 766 |
| Kzo9I | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| Lsp1109I | GCAGC | 3 cut(s) | 561, 1100, 1225 |
| LweI | GCATC | 5 cut(s) | 172, 241, 358, 566, 1200 |
| MaeI | CTAG | 1 cut(s) | 636 |
| MaeIII | GTNAC | 3 cut(s) | 149, 169, 433 |
| MalI | GATC | 7 cut(s) | 323, 339, 363, 750, 768, 945, 1328 |
| MboI | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| MboII | GAAGA | 4 cut(s) | 91, 464, 475, 1045 |
| MhlI | GDGCHC | 1 cut(s) | 877 |
| MluCI | AATT | 8 cut(s) | 49, 129, 268, 976, 1010, 1258, 1279, 1342 |
| MlyI | GAGTC | 1 cut(s) | 1278 |
| MmeI | TCCRAC | 1 cut(s) | 829 |
| MroI | TCCGGA | 1 cut(s) | 946 |
| MseI | TTAA | 5 cut(s) | 257, 975, 1014, 1050, 1334 |
| MslI | CAYNNNNRTG | 2 cut(s) | 357, 1260 |
| MspA1I | CMGCKG | 1 cut(s) | 236 |
| MspI | CCGG | 2 cut(s) | 947, 1357 |
| MspR9I | CCNGG | 2 cut(s) | 573, 753 |
| MvaI | CCWGG | 2 cut(s) | 573, 753 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 546, 902 |
| NdeI | CATATG | 1 cut(s) | 1189 |
| NdeII | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| NlaIII | CATG | 9 cut(s) | 92, 368, 406, 530, 635, 710, 1033, 1220, 1288 |
| NlaIV | GGNNCC | 2 cut(s) | 15, 524 |
| NmuCI | GTSAC | 1 cut(s) | 149 |
| NspI | RCATGY | 1 cut(s) | 635 |
| PagI | TCATGA | 1 cut(s) | 364 |
| PfeI | GAWTC | 1 cut(s) | 1036 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 532 |
| PkrI | GCNGC | 3 cut(s) | 551, 1090, 1215 |
| PleI | GAGTC | 1 cut(s) | 1277 |
| PpsI | GAGTC | 1 cut(s) | 1277 |
| PpuMI | RGGWCCY | 1 cut(s) | 965 |
| PshBI | ATTAAT | 1 cut(s) | 975 |
| Psp5II | RGGWCCY | 1 cut(s) | 965 |
| Psp6I | CCWGG | 2 cut(s) | 571, 751 |
| PspGI | CCWGG | 2 cut(s) | 571, 751 |
| PspN4I | GGNNCC | 2 cut(s) | 15, 524 |
| PspPI | GGNCC | 3 cut(s) | 346, 851, 965 |
| PspPPI | RGGWCCY | 1 cut(s) | 965 |
| PstNI | CAGNNNCTG | 1 cut(s) | 173 |
| RsaI | GTAC | 2 cut(s) | 245, 306 |
| RsaNI | GTAC | 2 cut(s) | 244, 305 |
| RseI | CAYNNNNRTG | 2 cut(s) | 357, 1260 |
| SaqAI | TTAA | 5 cut(s) | 257, 975, 1014, 1050, 1334 |
| SatI | GCNGC | 3 cut(s) | 550, 1089, 1214 |
| Sau3AI | GATC | 7 cut(s) | 321, 337, 361, 748, 766, 943, 1326 |
| Sau96I | GGNCC | 3 cut(s) | 346, 851, 965 |
| SchI | GAGTC | 1 cut(s) | 1278 |
| ScrFI | CCNGG | 2 cut(s) | 573, 753 |
| SduI | GDGCHC | 1 cut(s) | 877 |
| SfaNI | GCATC | 5 cut(s) | 172, 241, 358, 566, 1200 |
| SinI | GGWCC | 3 cut(s) | 346, 851, 965 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 357, 1260 |
| SmlI | CTYRAG | 1 cut(s) | 644 |
| SmoI | CTYRAG | 1 cut(s) | 644 |
| Sse9I | AATT | 8 cut(s) | 49, 129, 268, 976, 1010, 1258, 1279, 1342 |
| SsiI | CCGC | 1 cut(s) | 236 |
| SspI | AATATT | 1 cut(s) | 960 |
| SspMI | CTAG | 1 cut(s) | 636 |
| StyD4I | CCNGG | 2 cut(s) | 571, 751 |
| TaaI | ACNGT | 4 cut(s) | 76, 149, 662, 1354 |
| TaqI | TCGA | 2 cut(s) | 19, 1329 |
| TasI | AATT | 8 cut(s) | 49, 129, 268, 976, 1010, 1258, 1279, 1342 |
| TfiI | GAWTC | 1 cut(s) | 1036 |
| Tru1I | TTAA | 5 cut(s) | 257, 975, 1014, 1050, 1334 |
| Tru9I | TTAA | 5 cut(s) | 257, 975, 1014, 1050, 1334 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TseFI | GTSAC | 1 cut(s) | 149 |
| TseI | GCWGC | 3 cut(s) | 549, 1088, 1213 |
| Tsp45I | GTSAC | 1 cut(s) | 149 |
| TspRI | CASTG | 1 cut(s) | 79 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 532 |
| VpaK11BI | GGWCC | 3 cut(s) | 346, 851, 965 |
| VspI | ATTAAT | 1 cut(s) | 975 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 21 |
| XapI | RAATTY | 2 cut(s) | 268, 1010 |
| XceI | RCATGY | 1 cut(s) | 635 |
| XspI | CTAG | 1 cut(s) | 636 |