Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006648

Physical Location & Seq

Genomic Coordinates Forward (+)

83757890 .. 83761307

Gene Structure 3418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00061670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGATGATTCCTGGCGCATGCGCATGGGAATGCCGAGCGTGCCCGGCCGGCGCTCTGGCGCCGACCGAAACTTCACGCGCTCGGTATTCCCAGCATGTTCGGGGGTCGCCACAACTCTTCAAGCGGACGACTTCGCCGACGTGTTTGGGGGACCGCCACGGAGCGTCCTCCCGCGACAATCTTCCGGCTGCTCCACTTCATTCTGCGAGGAGATTTTCCAGCCGGAGTTCGTCTCTACATCGGATAAGAGGGGCCGGAACTTGCCGGAGTTCAGGATTCCGGCGAGGAGCGAGGGGTTCTATAGTGATATCTTTGGATCGGACGATGAGTTCCAGCGGAGGTCGAGAGAGCGGTCGAGGCCGAACTCCAAGGCCAAGTCTAATTCTTCTTCGGTGCTGAGCTCGGAGGAGCTGAGTCCTCTGCGGCCGCTCATCGGCGATGACGTGGCGTTGTCGTCCTTCGCTTCGAAGCTCAGGCCCATAAATGTAAGATGGGACTCATCGACTATGAAGCCCGCCAAGGAACATTCAAAGAAACAAGGAATACCCGCAGGTGTTCATTGCAGTCTTCCTTCATTCATCGAAAAACAAAATAATGAAAATGCATACGATGAACATACTAGAGCCTCCTACTTTGGATTCACACGAAAGGTTTTGTCCCCGGAAACCATTAGTATCGAACCCAGTTCATTTCGAAGTGTCAAGCTATCCACGGAGGATCTTGAACCACTCAACTCCCCTTCATCGGAAGTCTCTTCGATTTGTCAAGAACATGAGGCCAAAACGGGGATTCTTCATGATCATGTTTTGCCAGGAAAGGAAGTGGGGGTGCTAGAACAAGAAGAACTAGATGATGATGATGAAGTGATGAGCTCTTATGTGATTGAGATCAATTCTGACCATAGAGAGGGTACATGTGAAGAAGTTAACCTTGAAGAAGCAATTGCTTGGGCTAAAGAGAAGTTTCAAACGCATGGTGCTTCTGAAAAAGAATCAAGCATGACAGCTCATGATCACAATGAGCAGTCCATTGAAATGGATGAAGGAAGGCCTAATGTGGATGAATGCTCGGATCAACAGAGAGATGAACACGAAATGACTAGAACTCCCCAGGATGAAGACAGAACATGGTTAGGTGAAGATGAAAAGCAACATTCAGAAAAGGATATGGAACTGGAGTTCTTGGATGAAGACGTAAGGTTATGGTCAGCTGGGAAGGAATCCAACATTCGCATGCTTCTTTCAACACTACACCAGATTCTATGGCCCGATAGTGGTTGGTATACAATACCTCTGACAAGCCTAATAGAAAGTTCACAAGTCAAGAAAGCCTATCAAAAGGCAAGGCTATGTCTCCACCCTGACAAACTGCAACAAAGATCAGCAACACCAGCTCAAAAGTATGTTGCTGAGAAAGCTTTCTCCATCCTCCAGGATGCATGGGCAGTATTCATCTCCCAAGATGTTTTCATTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

492

Amino Acids

55.58

Weight (kDa)

4.95

Isoelectric Point (pI)

66.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30280 AT1G30280 AT1G30280
fragaria_vesca	FvH4_3g05060 FvH4_3g05060 FvH4_3g05060 FvH4_3g05060
malus_domestica	MD05G1279900.v1.1 MD10G1258400.v1.1
prunus_persica	Prupe.4G085400_v2.0.a1 Prupe.4G085400_v2.0.a1
pyrus_communis	pycom05g26010 pycom10g21470 pycom10g21480
rosa_chinensis	RchiOBHm_Chr5g0014901
rosa_laevigata	RLG00000032149
rosa_multiflora	Rmu_sc0013610.1_g000003
rosa_roxburghii	Rroxscaffold_1G00061670
rosa_rugosa	Rorug05G0021100.1 Rorug05G0021200
rosa_samantha	Rh5AG117000 Rh5BG113400 Rh5BG114000 Rh5CG125500 Rh5DG113400
rosa_wichuraiana	Rw5G010070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	542
Acc16I	TGCGCA	1 cut(s)	23
Acc36I	ACCTGC	1 cut(s)	542
AccB1I	GGYRCC	1 cut(s)	59
AccBSI	CCGCTC	2 cut(s)	352, 430
AccI	GTMKAC	1 cut(s)	1283
AccII	CGCG	2 cut(s)	79, 175
AciI	CCGC	9 cut(s)	125, 155, 173, 337, 352, 424, 428, 516, 549
AclWI	GGATC	3 cut(s)	325, 726, 1080
AcoI	YGGCCR	2 cut(s)	46, 425
AcyI	GRCGYC	1 cut(s)	60
AfaI	GTAC	1 cut(s)	913
AfiI	CCNNNNNNNGG	5 cut(s)	434, 745, 786, 907, 1274
AflIII	ACRYGT	2 cut(s)	141, 914
AgsI	TTSAA	7 cut(s)	122, 531, 725, 935, 968, 1034, 1245
AjiI	CACGTC	2 cut(s)	142, 445
AjnI	CCWGG	4 cut(s)	11, 811, 1110, 1431
AloI	GAACNNNNNNTCC	4 cut(s)	314, 346, 1163, 1195
AluBI	AGCT	9 cut(s)	402, 412, 472, 706, 873, 1007, 1211, 1394, 1418
AluI	AGCT	9 cut(s)	402, 412, 472, 706, 873, 1007, 1211, 1394, 1418
Alw21I	GWGCWC	2 cut(s)	404, 875
Alw26I	GTCTC	3 cut(s)	238, 757, 1358
AlwI	GGATC	3 cut(s)	325, 726, 1080
AoxI	GGCC	9 cut(s)	46, 253, 359, 372, 425, 476, 777, 1049, 1265
ApeKI	GCWGC	1 cut(s)	189
Asp700I	GAANNNNTTC	1 cut(s)	1418
AspLEI	GCGC	5 cut(s)	18, 24, 54, 62, 81
AspS9I	GGNCC	4 cut(s)	152, 253, 477, 1266
AsuC2I	CCSGG	2 cut(s)	45, 662
AsuHPI	GGTGA	1 cut(s)	1148
AsuII	TTCGAA	2 cut(s)	467, 694
AvaII	GGWCC	1 cut(s)	152
BaeGI	GKGCMC	1 cut(s)	45
BanI	GGYRCC	1 cut(s)	59
BanII	GRGCYC	2 cut(s)	404, 875
BbsI	GAAGAC	3 cut(s)	560, 1125, 1197
Bbv12I	GWGCWC	2 cut(s)	404, 875
BbvI	GCAGC	1 cut(s)	176
BccI	CCATC	2 cut(s)	486, 1433
BciT130I	CCWGG	4 cut(s)	13, 813, 1112, 1433
BclI	TGATCA	2 cut(s)	799, 1012
BcnI	CCSGG	2 cut(s)	45, 662
BcoDI	GTCTC	3 cut(s)	238, 757, 1358
BfaI	CTAG	5 cut(s)	621, 833, 848, 1101, 1477
BfmI	CTRYAG	1 cut(s)	301
BfoI	RGCGCY	2 cut(s)	55, 63
BfuAI	ACCTGC	1 cut(s)	542
BglI	GCCNNNNNGGC	1 cut(s)	49
BisI	GCNGC	3 cut(s)	190, 425, 428
BlpI	GCTNAGC	1 cut(s)	398
BlsI	GCNGC	3 cut(s)	191, 426, 429
Bme1390I	CCNGG	6 cut(s)	13, 45, 662, 813, 1112, 1433
Bme18I	GGWCC	1 cut(s)	152
BmgBI	CACGTC	2 cut(s)	142, 445
BmgT120I	GGNCC	4 cut(s)	152, 253, 477, 1266
BmiI	GGNNCC	3 cut(s)	61, 153, 254
BmrFI	CCNGG	6 cut(s)	13, 45, 662, 813, 1112, 1433
BmrI	ACTGGG	1 cut(s)	678
BmsI	GCATC	1 cut(s)	1426
BmuI	ACTGGG	1 cut(s)	678
BpiI	GAAGAC	3 cut(s)	560, 1125, 1197
BplI	GAGNNNNNCTC	2 cut(s)	218, 250
BpmI	CTGGAG	2 cut(s)	1196, 1415
Bpu10I	CCTNAGC	1 cut(s)	473
Bpu1102I	GCTNAGC	1 cut(s)	398
Bpu14I	TTCGAA	2 cut(s)	467, 694
BpuMI	CCSGG	2 cut(s)	45, 662
BsaBI	GATNNNNATC	1 cut(s)	887
BsaHI	GRCGYC	1 cut(s)	60
BsaJI	CCNNGG	6 cut(s)	158, 369, 519, 660, 711, 1110
BsaXI	ACNNNNNCTCC	2 cut(s)	1090, 1120
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 745, 786, 907, 1274
Bse118I	RCCGGY	1 cut(s)	48
Bse1I	ACTGG	2 cut(s)	684, 1179
Bse3DI	GCAATG	1 cut(s)	559
Bse8I	GATNNNNATC	1 cut(s)	887
BseBI	CCWGG	4 cut(s)	13, 813, 1112, 1433
BseDI	CCNNGG	6 cut(s)	158, 369, 519, 660, 711, 1110
BseGI	GGATG	7 cut(s)	10, 1045, 1066, 1120, 1192, 1425, 1441
BseJI	GATNNNNATC	1 cut(s)	887
BseLI	CCNNNNNNNGG	5 cut(s)	434, 745, 786, 907, 1274
BseMI	GCAATG	1 cut(s)	559
BseMII	CTCAG	4 cut(s)	389, 404, 487, 1401
BseNI	ACTGG	2 cut(s)	684, 1179
BseRI	GAGGAG	3 cut(s)	224, 301, 422
BseSI	GKGCMC	1 cut(s)	45
BseX3I	CGGCCG	2 cut(s)	46, 425
BseXI	GCAGC	1 cut(s)	176
BseYI	CCCAGC	2 cut(s)	91, 1211
Bsh1236I	CGCG	2 cut(s)	79, 175
Bsh1285I	CGRYCG	4 cut(s)	49, 67, 356, 428
BshFI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 779, 1051, 1267
BshNI	GGYRCC	1 cut(s)	59
BsiEI	CGRYCG	4 cut(s)	49, 67, 356, 428
BsiHKAI	GWGCWC	2 cut(s)	404, 875
BsiSI	CCGG	8 cut(s)	45, 49, 186, 224, 256, 266, 281, 662
BslFI	GGGAC	3 cut(s)	165, 509, 643
BslI	CCNNNNNNNGG	5 cut(s)	434, 745, 786, 907, 1274
BsmAI	GTCTC	3 cut(s)	238, 757, 1358
BsmBI	CGTCTC	1 cut(s)	238
BsmFI	GGGAC	3 cut(s)	165, 509, 643
BsmI	GAATGC	2 cut(s)	36, 1070
BsnI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 779, 1051, 1267
Bsp119I	TTCGAA	2 cut(s)	467, 694
Bsp1286I	GDGCHC	3 cut(s)	45, 404, 875
Bsp143I	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
Bsp1720I	GCTNAGC	1 cut(s)	398
BspACI	CCGC	9 cut(s)	125, 155, 173, 337, 352, 424, 428, 516, 549
BspANI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 779, 1051, 1267
BspCNI	CTCAG	4 cut(s)	390, 405, 486, 1402
BspFNI	CGCG	2 cut(s)	79, 175
BspHI	TCATGA	2 cut(s)	796, 1009
BspLI	GGNNCC	3 cut(s)	61, 153, 254
BspMI	ACCTGC	1 cut(s)	542
BspPI	GGATC	3 cut(s)	325, 726, 1080
BspT104I	TTCGAA	2 cut(s)	467, 694
BspT107I	GGYRCC	1 cut(s)	59
BsrBI	CCGCTC	2 cut(s)	352, 430
BsrDI	GCAATG	1 cut(s)	559
BsrFI	RCCGGY	1 cut(s)	48
BsrI	ACTGG	2 cut(s)	684, 1179
BssAI	RCCGGY	1 cut(s)	48
BssECI	CCNNGG	6 cut(s)	158, 369, 519, 660, 711, 1110
BssMI	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
BssNAI	GTATAC	1 cut(s)	1284
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	2 cut(s)	369, 519
Bst1107I	GTATAC	1 cut(s)	1284
Bst2UI	CCWGG	4 cut(s)	13, 813, 1112, 1433
Bst6I	CTCTTC	2 cut(s)	123, 760
BstACI	GRCGYC	1 cut(s)	60
BstBI	TTCGAA	2 cut(s)	467, 694
BstC8I	GCNNGC	5 cut(s)	20, 41, 50, 516, 1235
BstDEI	CTNAG	4 cut(s)	398, 413, 473, 1410
BstDSI	CCRYGG	2 cut(s)	158, 711
BstF5I	GGATG	7 cut(s)	10, 1045, 1066, 1120, 1192, 1425, 1441
BstFNI	CGCG	2 cut(s)	79, 175
BstH2I	RGCGCY	2 cut(s)	55, 63
BstHHI	GCGC	5 cut(s)	18, 24, 54, 62, 81
BstKTI	GATC	7 cut(s)	320, 721, 802, 891, 1015, 1075, 1382
BstMAI	GTCTC	3 cut(s)	238, 757, 1358
BstMBI	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
BstMCI	CGRYCG	4 cut(s)	49, 67, 356, 428
BstMWI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1391, 1415
BstNI	CCWGG	4 cut(s)	13, 813, 1112, 1433
BstNSI	RCATGY	4 cut(s)	22, 99, 918, 1237
BstSCI	CCNGG	6 cut(s)	11, 43, 660, 811, 1110, 1431
BstSFI	CTRYAG	1 cut(s)	301
BstSLI	GKGCMC	1 cut(s)	45
BstUI	CGCG	2 cut(s)	79, 175
BstV1I	GCAGC	1 cut(s)	176
BstV2I	GAAGAC	3 cut(s)	560, 1125, 1197
BstX2I	RGATCY	1 cut(s)	718
BstXI	CCANNNNNNTGG	1 cut(s)	1036
BstYI	RGATCY	1 cut(s)	718
BstZ17I	GTATAC	1 cut(s)	1284
BstZI	CGGCCG	2 cut(s)	46, 425
BsuRI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 779, 1051, 1267
BtgI	CCRYGG	2 cut(s)	158, 711
BtgZI	GCGATG	1 cut(s)	453
BtrI	CACGTC	2 cut(s)	142, 445
BtsCI	GGATG	7 cut(s)	10, 1045, 1066, 1120, 1192, 1425, 1441
BveI	ACCTGC	1 cut(s)	542
Cac8I	GCNNGC	5 cut(s)	20, 41, 50, 516, 1235
CciI	TCATGA	2 cut(s)	796, 1009
CciNI	GCGGCCGC	1 cut(s)	425
CfoI	GCGC	5 cut(s)	18, 24, 54, 62, 81
Cfr10I	RCCGGY	1 cut(s)	48
Cfr13I	GGNCC	4 cut(s)	152, 253, 477, 1266
CseI	GACGC	1 cut(s)	154
Csp6I	GTAC	1 cut(s)	912
CviQI	GTAC	1 cut(s)	912
DdeI	CTNAG	4 cut(s)	398, 413, 473, 1410
DinI	GGCGCC	1 cut(s)	61
DpnI	GATC	7 cut(s)	319, 720, 801, 890, 1014, 1074, 1381
DpnII	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
EaeI	YGGCCR	2 cut(s)	46, 425
EagI	CGGCCG	2 cut(s)	46, 425
Eam1104I	CTCTTC	2 cut(s)	123, 760
EarI	CTCTTC	2 cut(s)	123, 760
Ecl136II	GAGCTC	2 cut(s)	402, 873
EclXI	CGGCCG	2 cut(s)	46, 425
Eco130I	CCWWGG	2 cut(s)	369, 519
Eco147I	AGGCCT	1 cut(s)	1051
Eco24I	GRGCYC	2 cut(s)	404, 875
Eco32I	GATATC	1 cut(s)	310
Eco47I	GGWCC	1 cut(s)	152
Eco52I	CGGCCG	2 cut(s)	46, 425
Eco53kI	GAGCTC	2 cut(s)	402, 873
EcoICRI	GAGCTC	2 cut(s)	402, 873
EcoRII	CCWGG	4 cut(s)	11, 811, 1110, 1431
EcoRV	GATATC	1 cut(s)	310
EcoT14I	CCWWGG	2 cut(s)	369, 519
EcoT22I	ATGCAT	2 cut(s)	607, 1441
EcoT38I	GRGCYC	2 cut(s)	404, 875
EgeI	GGCGCC	1 cut(s)	61
EheI	GGCGCC	1 cut(s)	61
ErhI	CCWWGG	2 cut(s)	369, 519
Esp3I	CGTCTC	1 cut(s)	238
FalI	AAGNNNNNCTT	2 cut(s)	915, 947
FaqI	GGGAC	3 cut(s)	165, 509, 643
FauI	CCCGC	3 cut(s)	180, 523, 556
FbaI	TGATCA	2 cut(s)	799, 1012
FblI	GTMKAC	1 cut(s)	1283
Fnu4HI	GCNGC	3 cut(s)	190, 425, 428
FokI	GGATG	7 cut(s)	17, 1052, 1073, 1127, 1199, 1412, 1448
FriOI	GRGCYC	2 cut(s)	404, 875
Fsp4HI	GCNGC	3 cut(s)	190, 425, 428
FspAI	RTGCGCAY	1 cut(s)	23
FspBI	CTAG	5 cut(s)	621, 833, 848, 1101, 1477
FspI	TGCGCA	1 cut(s)	23
GlaI	GCGC	5 cut(s)	17, 23, 53, 61, 80
GluI	GCNGC	3 cut(s)	190, 425, 428
GsaI	CCCAGC	2 cut(s)	95, 1215
GsuI	CTGGAG	2 cut(s)	1196, 1415
HaeII	RGCGCY	2 cut(s)	55, 63
HaeIII	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 779, 1051, 1267
HapII	CCGG	8 cut(s)	45, 49, 186, 224, 256, 266, 281, 662
HgaI	GACGC	1 cut(s)	154
HhaI	GCGC	5 cut(s)	18, 24, 54, 62, 81
Hin1I	GRCGYC	1 cut(s)	60
Hin6I	GCGC	5 cut(s)	16, 22, 52, 60, 79
HinP1I	GCGC	5 cut(s)	16, 22, 52, 60, 79
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	1416
HinfI	GANTC	9 cut(s)	8, 277, 415, 497, 639, 790, 992, 1220, 1258
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	8 cut(s)	45, 49, 186, 224, 256, 266, 281, 662
HphI	GGTGA	1 cut(s)	1148
Hpy166II	GTNNAC	3 cut(s)	928, 1284, 1316
Hpy188I	TCNGA	9 cut(s)	244, 322, 406, 748, 898, 985, 1072, 1159, 1296
Hpy188III	TCNNGA	7 cut(s)	274, 345, 722, 767, 797, 1010, 1324
Hpy8I	GTNNAC	3 cut(s)	928, 1284, 1316
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	6 cut(s)	469, 582, 750, 1037, 1041, 1210
HpyCH4IV	ACGT	3 cut(s)	141, 444, 1194
HpyCH4V	TGCA	4 cut(s)	564, 605, 1372, 1439
HpyF10VI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1391, 1415
HpyF3I	CTNAG	4 cut(s)	398, 413, 473, 1410
HpySE526I	ACGT	3 cut(s)	141, 444, 1194
Hsp92I	GRCGYC	1 cut(s)	60
HspAI	GCGC	5 cut(s)	16, 22, 52, 60, 79
KasI	GGCGCC	1 cut(s)	59
KroI	GCCGGC	1 cut(s)	48
KroNI	GCCGGC	1 cut(s)	50
Ksp22I	TGATCA	2 cut(s)	799, 1012
KspAI	GTTAAC	1 cut(s)	928
Kzo9I	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
LmnI	GCTCC	4 cut(s)	162, 197, 288, 409
Lsp1109I	GCAGC	1 cut(s)	176
LweI	GCATC	1 cut(s)	1426
MaeI	CTAG	5 cut(s)	621, 833, 848, 1101, 1477
MaeII	ACGT	3 cut(s)	141, 444, 1194
MalI	GATC	7 cut(s)	319, 720, 801, 890, 1014, 1074, 1381
MbiI	CCGCTC	2 cut(s)	352, 430
MboI	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	1 cut(s)	718
MhlI	GDGCHC	3 cut(s)	45, 404, 875
MluCI	AATT	3 cut(s)	382, 892, 942
Mly113I	GGCGCC	1 cut(s)	60
MlyI	GAGTC	2 cut(s)	424, 491
MmeI	TCCRAC	1 cut(s)	1248
Mph1103I	ATGCAT	2 cut(s)	607, 1441
MroNI	GCCGGC	1 cut(s)	48
MroXI	GAANNNNTTC	1 cut(s)	1418
MseI	TTAA	1 cut(s)	927
MslI	CAYNNNNRTG	5 cut(s)	23, 29, 801, 1034, 1232
MspA1I	CMGCKG	2 cut(s)	337, 1211
MspI	CCGG	8 cut(s)	45, 49, 186, 224, 256, 266, 281, 662
MspR9I	CCNGG	6 cut(s)	13, 45, 662, 813, 1112, 1433
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	2 cut(s)	36, 1070
MvaI	CCWGG	4 cut(s)	13, 813, 1112, 1433
MvnI	CGCG	2 cut(s)	79, 175
MwoI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1391, 1415
NaeI	GCCGGC	1 cut(s)	50
NarI	GGCGCC	1 cut(s)	60
NciI	CCSGG	2 cut(s)	45, 662
NdeII	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
NgoMIV	GCCGGC	1 cut(s)	48
NlaIV	GGNNCC	3 cut(s)	61, 153, 254
NmeAIII	GCCGAG	1 cut(s)	60
NotI	GCGGCCGC	1 cut(s)	425
NsbI	TGCGCA	1 cut(s)	23
NsiI	ATGCAT	2 cut(s)	607, 1441
NspI	RCATGY	4 cut(s)	22, 99, 918, 1237
NspV	TTCGAA	2 cut(s)	467, 694
PaeI	GCATGC	2 cut(s)	22, 1237
PagI	TCATGA	2 cut(s)	796, 1009
PaqCI	CACCTGC	1 cut(s)	542
PceI	AGGCCT	1 cut(s)	1051
PciI	ACATGT	1 cut(s)	914
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 441
PctI	GAATGC	2 cut(s)	36, 1070
PdiI	GCCGGC	1 cut(s)	50
PdmI	GAANNNNTTC	1 cut(s)	1418
PfeI	GAWTC	7 cut(s)	8, 277, 639, 790, 992, 1220, 1258
PfoI	TCCNGGA	1 cut(s)	1431
PkrI	GCNGC	3 cut(s)	191, 426, 429
PleI	GAGTC	2 cut(s)	423, 491
PluTI	GGCGCC	1 cut(s)	63
PpsI	GAGTC	2 cut(s)	423, 491
PscI	ACATGT	1 cut(s)	914
Psp124BI	GAGCTC	2 cut(s)	404, 875
Psp6I	CCWGG	4 cut(s)	11, 811, 1110, 1431
PspFI	CCCAGC	2 cut(s)	91, 1211
PspGI	CCWGG	4 cut(s)	11, 811, 1110, 1431
PspN4I	GGNNCC	3 cut(s)	61, 153, 254
PspPI	GGNCC	4 cut(s)	152, 253, 477, 1266
PsuI	RGATCY	1 cut(s)	718
PvuII	CAGCTG	1 cut(s)	1211
RsaI	GTAC	1 cut(s)	913
RsaNI	GTAC	1 cut(s)	912
RseI	CAYNNNNRTG	5 cut(s)	23, 29, 801, 1034, 1232
SacI	GAGCTC	2 cut(s)	404, 875
SaqAI	TTAA	1 cut(s)	927
SatI	GCNGC	3 cut(s)	190, 425, 428
Sau3AI	GATC	7 cut(s)	317, 718, 799, 888, 1012, 1072, 1379
Sau96I	GGNCC	4 cut(s)	152, 253, 477, 1266
SchI	GAGTC	2 cut(s)	424, 491
ScrFI	CCNGG	6 cut(s)	13, 45, 662, 813, 1112, 1433
SduI	GDGCHC	3 cut(s)	45, 404, 875
SfaNI	GCATC	1 cut(s)	1426
SfcI	CTRYAG	1 cut(s)	301
SfoI	GGCGCC	1 cut(s)	61
SfuI	TTCGAA	2 cut(s)	467, 694
SinI	GGWCC	1 cut(s)	152
SmiMI	CAYNNNNRTG	5 cut(s)	23, 29, 801, 1034, 1232
SphI	GCATGC	2 cut(s)	22, 1237
Sse9I	AATT	3 cut(s)	382, 892, 942
SseBI	AGGCCT	1 cut(s)	1051
SsiI	CCGC	9 cut(s)	125, 155, 173, 337, 352, 424, 428, 516, 549
SspDI	GGCGCC	1 cut(s)	59
SspMI	CTAG	5 cut(s)	621, 833, 848, 1101, 1477
SstI	GAGCTC	2 cut(s)	404, 875
StuI	AGGCCT	1 cut(s)	1051
StyD4I	CCNGG	6 cut(s)	11, 43, 660, 811, 1110, 1431
StyI	CCWWGG	2 cut(s)	369, 519
TaiI	ACGT	3 cut(s)	144, 447, 1197
TaqI	TCGA	8 cut(s)	344, 356, 467, 503, 582, 678, 694, 758
TaqII	GACCGA	1 cut(s)	81
TasI	AATT	3 cut(s)	382, 892, 942
TauI	GCSGC	2 cut(s)	427, 430
TfiI	GAWTC	7 cut(s)	8, 277, 639, 790, 992, 1220, 1258
Tru1I	TTAA	1 cut(s)	927
Tru9I	TTAA	1 cut(s)	927
TseI	GCWGC	1 cut(s)	189
TspGWI	ACGGA	2 cut(s)	175, 728
VpaK11BI	GGWCC	1 cut(s)	152
XceI	RCATGY	4 cut(s)	22, 99, 918, 1237
XmiI	GTMKAC	1 cut(s)	1283
XmnI	GAANNNNTTC	1 cut(s)	1418
XspI	CTAG	5 cut(s)	621, 833, 848, 1101, 1477
Zsp2I	ATGCAT	2 cut(s)	607, 1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.