Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006648

Physical Location & Seq

Genomic Coordinates Reverse (-)

10676164 .. 10679878

Gene Structure 3715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG114000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGATGATTCCTGGCGCATGCGCATGGGAATGCCGAGCGTGCCCGGCCGGCGCTCTGGCGCCGACCGAACCTTCACTCGCTCGGTATTTCCAGCATGTTCGGGGGTCGCCACAACTCTTCAAGCGGACGACTTCGCCGACGTGTTTGGGGGACCGCCACGGAGCGTCCTCCCGCGACAATCTTCCGGCTGCTCCACTTCGTTCTGCGAGGAGATTTTCCAGCCGGAGTTCGTCTCTACATCTGATAAGAGGGGCCGGAACTTGCCGGAGTTCAGGATTCCGGCGAGGAGCGAGGGGTTCTATAGTGATATCTTTGGATCGGACGATGAGTTCCAGCGGAGGTCGAGAGAGCGGTCAAGGCCGAACTCCAAGGCCAAGTCGAATTCTTCTTCGGTGCTGAGCTCGGAGGAGCTGAGTCCTCTGCGGCCGGTCATCGGCGATGACGTGGCGTTGTCGTCCTTCGCTTCGAAGCTCAGGCCCATAAATGTAAGATCGACTATGAAGCCCGCCAAGGAACATTCCAAGAAACAAGGAATACCAGCAGGTGTTCATTGCAGTCTTCCTTCATTCATCGAAAAACAAAATAACGAAAATGCATACGATGAACATACTAGAGCCTCCTACTTTGGATTCACACGAAAGGTTTTGTCCCCGGAAACCATTAGTATCGAACCCAGTTCATTTCGAAGTGTCAAGCTATCCACGGAGGATCTTGAACCACTCAACTCCCCTTCATCGGAAGTCTCTTCGATTTGTCAAGAACATGAGGCCAAAACGGGGATTCTTCATGATCATGTTTTGCCAGGAAAAGAAGTGGGGGTGCTAGAACAAGAAGAACTAGATGATGATGATGATGAAGTGATGAGCTCTTATGTGATTGAGATCAATTCTGACCATAGAGAGGGTACATGTGAAGAAGTTAACCTTGAAGAAGCAATTGCTTGGGCTAAAGAGAAGTTTCAAACGCAGAGTGCTTCTGAAAAAGAATCAAGCATGACAGCTCATGATCACAATGAGCAGTCCATTGCAATGGATGAAGGAAGGCCTAAGGATCTATGCTCGGATCAACAGAGAGATGAACACGAAATGACTAGAACTCCCCAGGATGAAGACAGAACATGGTTAGGTGAAGATGAAAAGCAACATTCAGAAAAAGATATGGAACTGGAGTTCTTGGATGAAGACATAAGGTTATGGTCAGCTGGGAAGGAATCGAACATTCGCATGCTTCTTTCAACACTACACCAGATTCTATGGCCCAATAGTGGTTGGTATACAATACCTCTGACAAGCCTAATAGAAAGTTCACAAGTCAAGAAAGCCTATCAAAAGGCAAGGCTATGTCTCCACCCTGACAAACTGCAACAAAGATCAGCAACACCAGCTCAAAAGTATGTTGCTGAGAAAGCTTTCTCCATCCTCCAGGATGCATGGGCAGTATTCATCTCCCAAGATGTTTTCATTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

489

Amino Acids

55.16

Weight (kDa)

5.03

Isoelectric Point (pI)

66.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30280 AT1G30280 AT1G30280
fragaria_vesca	FvH4_3g05060 FvH4_3g05060 FvH4_3g05060 FvH4_3g05060
malus_domestica	MD05G1279900.v1.1 MD10G1258400.v1.1
prunus_persica	Prupe.4G085400_v2.0.a1 Prupe.4G085400_v2.0.a1
pyrus_communis	pycom05g26010 pycom10g21470 pycom10g21480
rosa_chinensis	RchiOBHm_Chr5g0014901
rosa_laevigata	RLG00000032149
rosa_multiflora	Rmu_sc0013610.1_g000003
rosa_roxburghii	Rroxscaffold_1G00061670
rosa_rugosa	Rorug05G0021100.1 Rorug05G0021200
rosa_samantha	Rh5AG117000 Rh5BG113400 Rh5BG114000 Rh5CG125500 Rh5DG113400
rosa_wichuraiana	Rw5G010070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	533
Acc16I	TGCGCA	1 cut(s)	23
Acc36I	ACCTGC	1 cut(s)	533
AccB1I	GGYRCC	1 cut(s)	59
AccBSI	CCGCTC	1 cut(s)	352
AccI	GTMKAC	1 cut(s)	1274
AccII	CGCG	1 cut(s)	175
AciI	CCGC	7 cut(s)	125, 155, 173, 337, 352, 424, 507
AclWI	GGATC	4 cut(s)	325, 717, 1059, 1071
AcoI	YGGCCR	2 cut(s)	46, 425
AcsI	RAATTY	1 cut(s)	382
AcyI	GRCGYC	1 cut(s)	60
AfaI	GTAC	1 cut(s)	907
AfiI	CCNNNNNNNGG	5 cut(s)	434, 736, 777, 901, 1265
AflIII	ACRYGT	2 cut(s)	141, 908
AgsI	TTSAA	5 cut(s)	122, 716, 929, 962, 1236
AjiI	CACGTC	2 cut(s)	142, 445
AjnI	CCWGG	4 cut(s)	11, 802, 1101, 1422
AloI	GAACNNNNNNTCC	4 cut(s)	314, 346, 1154, 1186
AluBI	AGCT	9 cut(s)	402, 412, 472, 697, 867, 1001, 1202, 1385, 1409
AluI	AGCT	9 cut(s)	402, 412, 472, 697, 867, 1001, 1202, 1385, 1409
Alw21I	GWGCWC	2 cut(s)	404, 869
Alw26I	GTCTC	3 cut(s)	238, 748, 1349
AlwI	GGATC	4 cut(s)	325, 717, 1059, 1071
AoxI	GGCC	9 cut(s)	46, 253, 359, 372, 425, 476, 768, 1043, 1256
ApeKI	GCWGC	1 cut(s)	189
ApoI	RAATTY	1 cut(s)	382
Asp700I	GAANNNNTTC	1 cut(s)	1409
AspLEI	GCGC	4 cut(s)	18, 24, 54, 62
AspS9I	GGNCC	4 cut(s)	152, 253, 477, 1257
AsuC2I	CCSGG	2 cut(s)	45, 653
AsuHPI	GGTGA	1 cut(s)	1139
AsuII	TTCGAA	2 cut(s)	467, 685
AvaII	GGWCC	1 cut(s)	152
AxyI	CCTNAGG	1 cut(s)	1047
BaeGI	GKGCMC	1 cut(s)	45
BanI	GGYRCC	1 cut(s)	59
BanII	GRGCYC	2 cut(s)	404, 869
BbsI	GAAGAC	3 cut(s)	551, 1116, 1188
Bbv12I	GWGCWC	2 cut(s)	404, 869
BbvI	GCAGC	1 cut(s)	176
BccI	CCATC	1 cut(s)	1424
BciT130I	CCWGG	4 cut(s)	13, 804, 1103, 1424
BclI	TGATCA	2 cut(s)	790, 1006
BcnI	CCSGG	2 cut(s)	45, 653
BcoDI	GTCTC	3 cut(s)	238, 748, 1349
BfaI	CTAG	5 cut(s)	612, 824, 839, 1092, 1468
BfmI	CTRYAG	1 cut(s)	301
BfoI	RGCGCY	2 cut(s)	55, 63
BfuAI	ACCTGC	1 cut(s)	533
BglI	GCCNNNNNGGC	1 cut(s)	49
BisI	GCNGC	2 cut(s)	190, 425
BlpI	GCTNAGC	1 cut(s)	398
BlsI	GCNGC	2 cut(s)	191, 426
Bme1390I	CCNGG	6 cut(s)	13, 45, 653, 804, 1103, 1424
Bme18I	GGWCC	1 cut(s)	152
BmgBI	CACGTC	2 cut(s)	142, 445
BmgT120I	GGNCC	4 cut(s)	152, 253, 477, 1257
BmiI	GGNNCC	3 cut(s)	61, 153, 254
BmrFI	CCNGG	6 cut(s)	13, 45, 653, 804, 1103, 1424
BmrI	ACTGGG	1 cut(s)	669
BmsI	GCATC	1 cut(s)	1417
BmuI	ACTGGG	1 cut(s)	669
BpiI	GAAGAC	3 cut(s)	551, 1116, 1188
BplI	GAGNNNNNCTC	2 cut(s)	218, 250
BpmI	CTGGAG	2 cut(s)	1187, 1406
Bpu10I	CCTNAGC	1 cut(s)	473
Bpu1102I	GCTNAGC	1 cut(s)	398
Bpu14I	TTCGAA	2 cut(s)	467, 685
BpuMI	CCSGG	2 cut(s)	45, 653
BsaBI	GATNNNNATC	1 cut(s)	881
BsaHI	GRCGYC	1 cut(s)	60
BsaJI	CCNNGG	6 cut(s)	158, 369, 510, 651, 702, 1101
BsaXI	ACNNNNNCTCC	2 cut(s)	1081, 1111
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 736, 777, 901, 1265
Bse118I	RCCGGY	2 cut(s)	48, 427
Bse1I	ACTGG	2 cut(s)	675, 1170
Bse21I	CCTNAGG	1 cut(s)	1047
Bse3DI	GCAATG	3 cut(s)	550, 1023, 1035
Bse8I	GATNNNNATC	1 cut(s)	881
BseBI	CCWGG	4 cut(s)	13, 804, 1103, 1424
BseDI	CCNNGG	6 cut(s)	158, 369, 510, 651, 702, 1101
BseGI	GGATG	6 cut(s)	10, 1039, 1111, 1183, 1416, 1432
BseJI	GATNNNNATC	1 cut(s)	881
BseLI	CCNNNNNNNGG	5 cut(s)	434, 736, 777, 901, 1265
BseMI	GCAATG	3 cut(s)	550, 1023, 1035
BseMII	CTCAG	4 cut(s)	389, 404, 487, 1392
BseNI	ACTGG	2 cut(s)	675, 1170
BseRI	GAGGAG	3 cut(s)	224, 301, 422
BseSI	GKGCMC	1 cut(s)	45
BseX3I	CGGCCG	2 cut(s)	46, 425
BseXI	GCAGC	1 cut(s)	176
BseYI	CCCAGC	1 cut(s)	1202
Bsh1236I	CGCG	1 cut(s)	175
Bsh1285I	CGRYCG	3 cut(s)	49, 67, 428
BshFI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 770, 1045, 1258
BshNI	GGYRCC	1 cut(s)	59
BsiEI	CGRYCG	3 cut(s)	49, 67, 428
BsiHKAI	GWGCWC	2 cut(s)	404, 869
BsiSI	CCGG	9 cut(s)	45, 49, 186, 224, 256, 266, 281, 428, 653
BslFI	GGGAC	2 cut(s)	165, 634
BslI	CCNNNNNNNGG	5 cut(s)	434, 736, 777, 901, 1265
BsmAI	GTCTC	3 cut(s)	238, 748, 1349
BsmBI	CGTCTC	1 cut(s)	238
BsmFI	GGGAC	2 cut(s)	165, 634
BsmI	GAATGC	1 cut(s)	36
BsnI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 770, 1045, 1258
Bsp119I	TTCGAA	2 cut(s)	467, 685
Bsp1286I	GDGCHC	3 cut(s)	45, 404, 869
Bsp143I	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
Bsp1720I	GCTNAGC	1 cut(s)	398
BspACI	CCGC	7 cut(s)	125, 155, 173, 337, 352, 424, 507
BspANI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 770, 1045, 1258
BspCNI	CTCAG	4 cut(s)	390, 405, 486, 1393
BspFNI	CGCG	1 cut(s)	175
BspHI	TCATGA	2 cut(s)	787, 1003
BspLI	GGNNCC	3 cut(s)	61, 153, 254
BspMI	ACCTGC	1 cut(s)	533
BspPI	GGATC	4 cut(s)	325, 717, 1059, 1071
BspT104I	TTCGAA	2 cut(s)	467, 685
BspT107I	GGYRCC	1 cut(s)	59
BsrBI	CCGCTC	1 cut(s)	352
BsrDI	GCAATG	3 cut(s)	550, 1023, 1035
BsrFI	RCCGGY	2 cut(s)	48, 427
BsrI	ACTGG	2 cut(s)	675, 1170
BssAI	RCCGGY	2 cut(s)	48, 427
BssECI	CCNNGG	6 cut(s)	158, 369, 510, 651, 702, 1101
BssMI	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
BssNAI	GTATAC	1 cut(s)	1275
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	2 cut(s)	369, 510
Bst1107I	GTATAC	1 cut(s)	1275
Bst2UI	CCWGG	4 cut(s)	13, 804, 1103, 1424
Bst6I	CTCTTC	2 cut(s)	123, 751
BstACI	GRCGYC	1 cut(s)	60
BstBI	TTCGAA	2 cut(s)	467, 685
BstC8I	GCNNGC	5 cut(s)	20, 41, 50, 507, 1226
BstDEI	CTNAG	5 cut(s)	398, 413, 473, 1047, 1401
BstDSI	CCRYGG	2 cut(s)	158, 702
BstF5I	GGATG	6 cut(s)	10, 1039, 1111, 1183, 1416, 1432
BstFNI	CGCG	1 cut(s)	175
BstH2I	RGCGCY	2 cut(s)	55, 63
BstHHI	GCGC	4 cut(s)	18, 24, 54, 62
BstKTI	GATC	9 cut(s)	320, 494, 712, 793, 885, 1009, 1054, 1066, 1373
BstMAI	GTCTC	3 cut(s)	238, 748, 1349
BstMBI	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
BstMCI	CGRYCG	3 cut(s)	49, 67, 428
BstMWI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1382, 1406
BstNI	CCWGG	4 cut(s)	13, 804, 1103, 1424
BstNSI	RCATGY	4 cut(s)	22, 99, 912, 1228
BstSCI	CCNGG	6 cut(s)	11, 43, 651, 802, 1101, 1422
BstSFI	CTRYAG	1 cut(s)	301
BstSLI	GKGCMC	1 cut(s)	45
BstUI	CGCG	1 cut(s)	175
BstV1I	GCAGC	1 cut(s)	176
BstV2I	GAAGAC	3 cut(s)	551, 1116, 1188
BstX2I	RGATCY	2 cut(s)	709, 1051
BstXI	CCANNNNNNTGG	1 cut(s)	1030
BstYI	RGATCY	2 cut(s)	709, 1051
BstZ17I	GTATAC	1 cut(s)	1275
BstZI	CGGCCG	2 cut(s)	46, 425
Bsu36I	CCTNAGG	1 cut(s)	1047
BsuRI	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 770, 1045, 1258
BtgI	CCRYGG	2 cut(s)	158, 702
BtgZI	GCGATG	1 cut(s)	453
BtrI	CACGTC	2 cut(s)	142, 445
BtsCI	GGATG	6 cut(s)	10, 1039, 1111, 1183, 1416, 1432
BveI	ACCTGC	1 cut(s)	533
Cac8I	GCNNGC	5 cut(s)	20, 41, 50, 507, 1226
CciI	TCATGA	2 cut(s)	787, 1003
CfoI	GCGC	4 cut(s)	18, 24, 54, 62
Cfr10I	RCCGGY	2 cut(s)	48, 427
Cfr13I	GGNCC	4 cut(s)	152, 253, 477, 1257
CseI	GACGC	1 cut(s)	154
Csp6I	GTAC	1 cut(s)	906
CviQI	GTAC	1 cut(s)	906
DdeI	CTNAG	5 cut(s)	398, 413, 473, 1047, 1401
DinI	GGCGCC	1 cut(s)	61
DpnI	GATC	9 cut(s)	319, 493, 711, 792, 884, 1008, 1053, 1065, 1372
DpnII	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
EaeI	YGGCCR	2 cut(s)	46, 425
EagI	CGGCCG	2 cut(s)	46, 425
Eam1104I	CTCTTC	2 cut(s)	123, 751
EarI	CTCTTC	2 cut(s)	123, 751
Ecl136II	GAGCTC	2 cut(s)	402, 867
EclXI	CGGCCG	2 cut(s)	46, 425
Eco130I	CCWWGG	2 cut(s)	369, 510
Eco147I	AGGCCT	1 cut(s)	1045
Eco24I	GRGCYC	2 cut(s)	404, 869
Eco32I	GATATC	1 cut(s)	310
Eco47I	GGWCC	1 cut(s)	152
Eco52I	CGGCCG	2 cut(s)	46, 425
Eco53kI	GAGCTC	2 cut(s)	402, 867
Eco81I	CCTNAGG	1 cut(s)	1047
EcoICRI	GAGCTC	2 cut(s)	402, 867
EcoRI	GAATTC	1 cut(s)	382
EcoRII	CCWGG	4 cut(s)	11, 802, 1101, 1422
EcoRV	GATATC	1 cut(s)	310
EcoT14I	CCWWGG	2 cut(s)	369, 510
EcoT22I	ATGCAT	2 cut(s)	598, 1432
EcoT38I	GRGCYC	2 cut(s)	404, 869
EgeI	GGCGCC	1 cut(s)	61
EheI	GGCGCC	1 cut(s)	61
ErhI	CCWWGG	2 cut(s)	369, 510
Esp3I	CGTCTC	1 cut(s)	238
FalI	AAGNNNNNCTT	2 cut(s)	909, 941
FaqI	GGGAC	2 cut(s)	165, 634
FauI	CCCGC	2 cut(s)	180, 514
FbaI	TGATCA	2 cut(s)	790, 1006
FblI	GTMKAC	1 cut(s)	1274
Fnu4HI	GCNGC	2 cut(s)	190, 425
FokI	GGATG	6 cut(s)	17, 1046, 1118, 1190, 1403, 1439
FriOI	GRGCYC	2 cut(s)	404, 869
Fsp4HI	GCNGC	2 cut(s)	190, 425
FspAI	RTGCGCAY	1 cut(s)	23
FspBI	CTAG	5 cut(s)	612, 824, 839, 1092, 1468
FspI	TGCGCA	1 cut(s)	23
GlaI	GCGC	4 cut(s)	17, 23, 53, 61
GluI	GCNGC	2 cut(s)	190, 425
GsaI	CCCAGC	1 cut(s)	1206
GsuI	CTGGAG	2 cut(s)	1187, 1406
HaeII	RGCGCY	2 cut(s)	55, 63
HaeIII	GGCC	9 cut(s)	48, 255, 361, 374, 427, 478, 770, 1045, 1258
HapII	CCGG	9 cut(s)	45, 49, 186, 224, 256, 266, 281, 428, 653
HgaI	GACGC	1 cut(s)	154
HhaI	GCGC	4 cut(s)	18, 24, 54, 62
Hin1I	GRCGYC	1 cut(s)	60
Hin6I	GCGC	4 cut(s)	16, 22, 52, 60
HinP1I	GCGC	4 cut(s)	16, 22, 52, 60
HincII	GTYRAC	1 cut(s)	922
HindII	GTYRAC	1 cut(s)	922
HindIII	AAGCTT	1 cut(s)	1407
HinfI	GANTC	8 cut(s)	8, 277, 415, 630, 781, 986, 1211, 1249
HpaI	GTTAAC	1 cut(s)	922
HpaII	CCGG	9 cut(s)	45, 49, 186, 224, 256, 266, 281, 428, 653
HphI	GGTGA	1 cut(s)	1139
Hpy166II	GTNNAC	3 cut(s)	922, 1275, 1307
Hpy188I	TCNGA	9 cut(s)	244, 322, 406, 739, 892, 979, 1063, 1150, 1287
Hpy188III	TCNNGA	7 cut(s)	274, 345, 713, 758, 788, 1004, 1315
Hpy8I	GTNNAC	3 cut(s)	922, 1275, 1307
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	7 cut(s)	82, 469, 573, 741, 1031, 1035, 1201
HpyCH4IV	ACGT	2 cut(s)	141, 444
HpyCH4V	TGCA	5 cut(s)	555, 596, 1028, 1363, 1430
HpyF10VI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1382, 1406
HpyF3I	CTNAG	5 cut(s)	398, 413, 473, 1047, 1401
HpySE526I	ACGT	2 cut(s)	141, 444
Hsp92I	GRCGYC	1 cut(s)	60
HspAI	GCGC	4 cut(s)	16, 22, 52, 60
KasI	GGCGCC	1 cut(s)	59
KroI	GCCGGC	1 cut(s)	48
KroNI	GCCGGC	1 cut(s)	50
Ksp22I	TGATCA	2 cut(s)	790, 1006
KspAI	GTTAAC	1 cut(s)	922
Kzo9I	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
LmnI	GCTCC	4 cut(s)	162, 197, 288, 409
Lsp1109I	GCAGC	1 cut(s)	176
LweI	GCATC	1 cut(s)	1417
MaeI	CTAG	5 cut(s)	612, 824, 839, 1092, 1468
MaeII	ACGT	2 cut(s)	141, 444
MalI	GATC	9 cut(s)	319, 493, 711, 792, 884, 1008, 1053, 1065, 1372
MbiI	CCGCTC	1 cut(s)	352
MboI	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	2 cut(s)	709, 1051
MhlI	GDGCHC	3 cut(s)	45, 404, 869
MluCI	AATT	3 cut(s)	382, 886, 936
Mly113I	GGCGCC	1 cut(s)	60
MlyI	GAGTC	1 cut(s)	424
Mph1103I	ATGCAT	2 cut(s)	598, 1432
MroNI	GCCGGC	1 cut(s)	48
MroXI	GAANNNNTTC	1 cut(s)	1409
MseI	TTAA	1 cut(s)	921
MslI	CAYNNNNRTG	5 cut(s)	23, 29, 792, 1028, 1223
MspA1I	CMGCKG	2 cut(s)	337, 1202
MspI	CCGG	9 cut(s)	45, 49, 186, 224, 256, 266, 281, 428, 653
MspR9I	CCNGG	6 cut(s)	13, 45, 653, 804, 1103, 1424
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	1 cut(s)	36
MvaI	CCWGG	4 cut(s)	13, 804, 1103, 1424
MvnI	CGCG	1 cut(s)	175
MwoI	GCNNNNNNNGC	6 cut(s)	40, 45, 49, 358, 1382, 1406
NaeI	GCCGGC	1 cut(s)	50
NarI	GGCGCC	1 cut(s)	60
NciI	CCSGG	2 cut(s)	45, 653
NdeII	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
NgoMIV	GCCGGC	1 cut(s)	48
NlaIV	GGNNCC	3 cut(s)	61, 153, 254
NmeAIII	GCCGAG	1 cut(s)	60
NsbI	TGCGCA	1 cut(s)	23
NsiI	ATGCAT	2 cut(s)	598, 1432
NspI	RCATGY	4 cut(s)	22, 99, 912, 1228
NspV	TTCGAA	2 cut(s)	467, 685
PaeI	GCATGC	2 cut(s)	22, 1228
PagI	TCATGA	2 cut(s)	787, 1003
PaqCI	CACCTGC	1 cut(s)	533
PceI	AGGCCT	1 cut(s)	1045
PciI	ACATGT	1 cut(s)	908
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 441
PctI	GAATGC	1 cut(s)	36
PdiI	GCCGGC	1 cut(s)	50
PdmI	GAANNNNTTC	1 cut(s)	1409
PfeI	GAWTC	7 cut(s)	8, 277, 630, 781, 986, 1211, 1249
PfoI	TCCNGGA	1 cut(s)	1422
PkrI	GCNGC	2 cut(s)	191, 426
PleI	GAGTC	1 cut(s)	423
PluTI	GGCGCC	1 cut(s)	63
PpsI	GAGTC	1 cut(s)	423
PscI	ACATGT	1 cut(s)	908
Psp124BI	GAGCTC	2 cut(s)	404, 869
Psp6I	CCWGG	4 cut(s)	11, 802, 1101, 1422
PspFI	CCCAGC	1 cut(s)	1202
PspGI	CCWGG	4 cut(s)	11, 802, 1101, 1422
PspN4I	GGNNCC	3 cut(s)	61, 153, 254
PspPI	GGNCC	4 cut(s)	152, 253, 477, 1257
PsuI	RGATCY	2 cut(s)	709, 1051
PvuII	CAGCTG	1 cut(s)	1202
RsaI	GTAC	1 cut(s)	907
RsaNI	GTAC	1 cut(s)	906
RseI	CAYNNNNRTG	5 cut(s)	23, 29, 792, 1028, 1223
SacI	GAGCTC	2 cut(s)	404, 869
SaqAI	TTAA	1 cut(s)	921
SatI	GCNGC	2 cut(s)	190, 425
Sau3AI	GATC	9 cut(s)	317, 491, 709, 790, 882, 1006, 1051, 1063, 1370
Sau96I	GGNCC	4 cut(s)	152, 253, 477, 1257
SchI	GAGTC	1 cut(s)	424
ScrFI	CCNGG	6 cut(s)	13, 45, 653, 804, 1103, 1424
SduI	GDGCHC	3 cut(s)	45, 404, 869
SfaNI	GCATC	1 cut(s)	1417
SfcI	CTRYAG	1 cut(s)	301
SfoI	GGCGCC	1 cut(s)	61
SfuI	TTCGAA	2 cut(s)	467, 685
SinI	GGWCC	1 cut(s)	152
SmiMI	CAYNNNNRTG	5 cut(s)	23, 29, 792, 1028, 1223
SphI	GCATGC	2 cut(s)	22, 1228
Sse9I	AATT	3 cut(s)	382, 886, 936
SseBI	AGGCCT	1 cut(s)	1045
SsiI	CCGC	7 cut(s)	125, 155, 173, 337, 352, 424, 507
SspDI	GGCGCC	1 cut(s)	59
SspMI	CTAG	5 cut(s)	612, 824, 839, 1092, 1468
SstI	GAGCTC	2 cut(s)	404, 869
StuI	AGGCCT	1 cut(s)	1045
StyD4I	CCNGG	6 cut(s)	11, 43, 651, 802, 1101, 1422
StyI	CCWWGG	2 cut(s)	369, 510
TaiI	ACGT	2 cut(s)	144, 447
TaqI	TCGA	9 cut(s)	344, 380, 467, 494, 573, 669, 685, 749, 1214
TaqII	GACCGA	1 cut(s)	81
TasI	AATT	3 cut(s)	382, 886, 936
TauI	GCSGC	1 cut(s)	427
TfiI	GAWTC	7 cut(s)	8, 277, 630, 781, 986, 1211, 1249
Tru1I	TTAA	1 cut(s)	921
Tru9I	TTAA	1 cut(s)	921
TseI	GCWGC	1 cut(s)	189
TspGWI	ACGGA	2 cut(s)	175, 719
VpaK11BI	GGWCC	1 cut(s)	152
XapI	RAATTY	1 cut(s)	382
XceI	RCATGY	4 cut(s)	22, 99, 912, 1228
XmiI	GTMKAC	1 cut(s)	1274
XmnI	GAANNNNTTC	1 cut(s)	1409
XspI	CTAG	5 cut(s)	612, 824, 839, 1092, 1468
Zsp2I	ATGCAT	2 cut(s)	598, 1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.