Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008453

Physical Location & Seq

Genomic Coordinates Forward (+)

19189067 .. 19194649

Gene Structure 5583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00098040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGTGCTTAATGGTGGGACAAAGACATGTCCTGAATCCTGATGATGAAATTGAAGGCAAAGGTTCTGTGGTGCTGGCACATGCTAGTTACACCCGAAGGGGTTATTTGGCTGTTGAGAGCTGTCCAAGACACAAAAGGGGCCTTGTTACAACCGACGATCAACGCTCTTCTATAGAGGAGGCTCTGGTGACTGTGGAGGGATATAACAAGGGTGCACCTTTAGACTTGGTGAAGTTGGATGGGACATGGCGGTTGCAATATACTTCTGCTCCTGATGTTCTCATTCTTCTGGAAGCAGCTGAAAGGGTATCTTTCTTTCAGGTGGGGCAGATATTTCAAAAATTTGAATGCAAAGACCAATCCAACGGCGGTATAATCCGTAATGTTGTCAAATGGAGTGTTCCACCGTTGTTAGAGGTAATAGCCGTACATGAGGATGTCAATGCAAATCGGGAAGAAGACGGTGCTACTCTGCTAGTTTCTGCCAAGTTTGCTGTTGTTTCCGTGCGTAACATCTATCTTCAGTTTGAAGAGATTAGTGTTCAAAATATAAAAATTGGTGAACAGCTGCAGGCTCTTATAGCTCCAGCATTACTGCCGAGGTCATTTTTGAGTTTACAGATCTTACAGTTCCTCCGCACTTTCAAAGCCCAAATTCCTGTTAGTGATCCAGGAACAGGAAGGCAATCCGTAGGAGGACTCTATTACCTTTCTTACTTGGATGCTAATATGCTTTTGGGGCGTGCGGTTGGTGGCGGAGGAGTTTTTGTTTTCACTAAAGCTCAACCCCTGGAATTATGTGTGGTCGTTTGGTTCAGGATATTGACTCGATTACGTTCCATGTATAGACTGATTCTCGTAGGATACCTCTCCATAAATACCTCTAAGGGGGAGAGCAATGAAATAATCATAAAAAGATCTAGAGATTTTTCTTTTTCTTGGAATAAGTTTCGACATCCAGCACAAAGCCTTGCCCAAAAATATTTGGACATGGCTGAAGAGGAGTCTCATTCCCTTCTAGAGATGACACAACGGTCTCATGTTACCAACTCATCAGCGTCAACCGTTCGACCATCACCATCAACCTCCCAAACATCATCATCAACCCCTCAACCTCCCATTGCCGCGCCTCAACATGTTTCCGTCCTCATGCCGGTCCAACTCACCACCGACGACATTGACGCGCCTCAACGTGTTTCTGTCCTCATGCCGGTCCAACTCACCGACGAGGACAATTATTTGCTGTGGAAATCCTTCTTCCTCCCAATCCTAGGGTCCCATAATATGTTAGATCTCGCTGAGGGAAGAGAGAAGTGTCCACCACAATTCCTGAGTAGTACAGAAGACAGAAAAAAAGTCGAAAACCCTGCCTATACCGATTGGATTAGGAGGGATCAGACATTCCTAGTGTGGATTAATGTCAGCATATCCAAGGGCCTACTACTCCGGTACGCAACAGGATGCACAAGTGGAAGAGCTCTATGGCTGACCTTCGAAAAACTGTTTGCCAACAAGGCAAGAGCTCGCGTAGAACAGCTGATGGATCAACTCAGAGACCTGAAAATGGAAAGGCCAGATGAATTTAGAATGGAGGAATACATAAACTCAGCGAACCAAATCGCTGATAACCTCCATGCAATGGGGTCTCCTGTTGAGGATGATGAATTTGTTTCTTATGTACTCCGAGGACTACTTCCACAGGAATGTGATGAGTTAAAAGCCTCGATCAGGGATCGGCCTGTGCCCGTAACGCGAGAAGAATTGAATGACTTATTACTAAACCATAGATTCCCAGTCGGCCCAGTTGCCAAGATTATCAGCATCTTCTGTGTAGTCGTCATTTTGTTTTTGCCATTGGGGTTATTGTTTGGTCGTCGTGGTAAAATAGCAAGCCAAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_fibrillin

Protein Analysis

633

Amino Acids

71.18

Weight (kDa)

6.46

Isoelectric Point (pI)

54.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP_fibrillin	PF04755	42 - 258	3.3e-16	PAP_fibrillin
Retrotran_gag_2	PF14223	448 - 595	2.8e-12	gag-polypeptide of LTR copia-type

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46910
fragaria_vesca	FvH4_6g36990 FvH4_6g36990 FvH4_6g36990 FvH4_6g36990 FvH4_6g36990 FvH4_6g36990
malus_domestica	MD17G1162500.v1.1
prunus_persica	Prupe.3G022800_v2.0.a1 Prupe.3G022800_v2.0.a1 Prupe.3G022800_v2.0.a1
pyrus_communis	pycom17g15560
rosa_chinensis	RchiOBHm_Chr2g0149531
rosa_laevigata	RLG00000020417
rosa_multiflora	Rmu_sc0006867.1_g000012 Rmu_sc0008619.1_g000008
rosa_roxburghii	Rroxscaffold_2G00098040
rosa_rugosa	Rorug02G0412100
rosa_samantha	Rh2AG472500 Rh2BG484500 Rh2CG458400 Rh2DG493700
rosa_wichuraiana	Rw2G038510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1033
AccB7I	CCANNNNNTGG	1 cut(s)	1639
AccII	CGCG	4 cut(s)	1127, 1184, 1527, 1753
AciI	CCGC	6 cut(s)	250, 369, 637, 746, 756, 1125
AclWI	GGATC	4 cut(s)	662, 1401, 1551, 1740
AcsI	RAATTY	4 cut(s)	341, 654, 1580, 1664
AcuI	CTGAAG	2 cut(s)	506, 1017
AfaI	GTAC	4 cut(s)	429, 1339, 1451, 1680
AfiI	CCNNNNNNNGG	8 cut(s)	677, 888, 1153, 1210, 1271, 1564, 1639, 1728
AflIII	ACRYGT	3 cut(s)	25, 1135, 1192
AgsI	TTSAA	7 cut(s)	53, 338, 347, 530, 545, 646, 1765
AjnI	CCWGG	2 cut(s)	670, 789
AluBI	AGCT	8 cut(s)	120, 299, 568, 584, 782, 1478, 1523, 1537
AluI	AGCT	8 cut(s)	120, 299, 568, 584, 782, 1478, 1523, 1537
Alw21I	GWGCWC	3 cut(s)	217, 1480, 1525
Alw26I	GTCTC	4 cut(s)	1011, 1041, 1548, 1650
Alw44I	GTGCAC	1 cut(s)	213
AlwI	GGATC	4 cut(s)	662, 1401, 1551, 1740
AoxI	GGCC	5 cut(s)	139, 1435, 1571, 1736, 1798
ApaLI	GTGCAC	1 cut(s)	213
ApeKI	GCWGC	2 cut(s)	296, 568
ApoI	RAATTY	4 cut(s)	341, 654, 1580, 1664
AseI	ATTAAT	1 cut(s)	1416
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspA2I	CCTAGG	1 cut(s)	1270
AspLEI	GCGC	2 cut(s)	1129, 1186
AspS9I	GGNCC	6 cut(s)	139, 1156, 1213, 1275, 1435, 1799
AsuHPI	GGTGA	6 cut(s)	199, 241, 572, 1068, 1156, 1213
AsuII	TTCGAA	1 cut(s)	1494
AvaII	GGWCC	3 cut(s)	1156, 1213, 1275
AvrII	CCTAGG	1 cut(s)	1270
BaeGI	GKGCMC	2 cut(s)	217, 1746
BanII	GRGCYC	2 cut(s)	1480, 1525
BbsI	GAAGAC	2 cut(s)	465, 1350
Bbv12I	GWGCWC	3 cut(s)	217, 1480, 1525
BbvCI	CCTCAGC	1 cut(s)	1299
BbvI	GCAGC	2 cut(s)	308, 555
BccI	CCATC	4 cut(s)	233, 1081, 1087, 1534
BceAI	ACGGC	2 cut(s)	382, 410
BcgI	CGANNNNNNTGC	2 cut(s)	1349, 1383
BciT130I	CCWGG	2 cut(s)	672, 791
BciVI	GTATCC	1 cut(s)	857
BcoDI	GTCTC	4 cut(s)	1011, 1041, 1548, 1650
BfaI	CTAG	6 cut(s)	84, 476, 921, 1019, 1271, 1406
BfmI	CTRYAG	2 cut(s)	171, 569
BfuI	GTATCC	1 cut(s)	857
BglI	GCCNNNNNGGC	1 cut(s)	1514
BglII	AGATCT	3 cut(s)	621, 917, 1291
BisI	GCNGC	3 cut(s)	297, 569, 1125
BlnI	CCTAGG	1 cut(s)	1270
BlsI	GCNGC	3 cut(s)	298, 570, 1126
Bme1390I	CCNGG	2 cut(s)	672, 791
Bme18I	GGWCC	3 cut(s)	1156, 1213, 1275
BmgT120I	GGNCC	6 cut(s)	139, 1156, 1213, 1275, 1435, 1799
BmiI	GGNNCC	3 cut(s)	140, 1276, 1277
BmrFI	CCNGG	2 cut(s)	672, 791
BmrI	ACTGGG	2 cut(s)	1787, 1796
BmsI	GCATC	3 cut(s)	712, 1451, 1830
BmuI	ACTGGG	2 cut(s)	1787, 1796
BpiI	GAAGAC	2 cut(s)	465, 1350
BpmI	CTGGAG	1 cut(s)	570
Bpu10I	CCTNAGC	1 cut(s)	1299
Bpu14I	TTCGAA	1 cut(s)	1494
BsaI	GGTCTC	3 cut(s)	1041, 1548, 1650
BsaJI	CCNNGG	5 cut(s)	599, 789, 1270, 1431, 1684
BsaWI	WCCGGW	1 cut(s)	1446
BsaXI	ACNNNNNCTCC	6 cut(s)	253, 283, 618, 648, 753, 783
Bsc4I	CCNNNNNNNGG	8 cut(s)	677, 888, 1153, 1210, 1271, 1564, 1639, 1728
Bse118I	RCCGGY	2 cut(s)	1153, 1210
Bse1I	ACTGG	2 cut(s)	1793, 1802
Bse3DI	GCAATG	3 cut(s)	904, 1119, 1644
BseBI	CCWGG	2 cut(s)	672, 791
BseDI	CCNNGG	5 cut(s)	599, 789, 1270, 1431, 1684
BseGI	GGATG	6 cut(s)	244, 442, 727, 955, 1466, 1663
BseLI	CCNNNNNNNGG	8 cut(s)	677, 888, 1153, 1210, 1271, 1564, 1639, 1728
BseMI	GCAATG	3 cut(s)	904, 1119, 1644
BseMII	CTCAG	4 cut(s)	1290, 1322, 1564, 1620
BseNI	ACTGG	2 cut(s)	1793, 1802
BseRI	GAGGAG	3 cut(s)	191, 774, 1016
BseSI	GKGCMC	2 cut(s)	217, 1746
BseXI	GCAGC	2 cut(s)	308, 555
Bsh1236I	CGCG	4 cut(s)	1127, 1184, 1527, 1753
BshFI	GGCC	5 cut(s)	141, 1437, 1573, 1738, 1800
BsiHKAI	GWGCWC	3 cut(s)	217, 1480, 1525
BsiSI	CCGG	3 cut(s)	1154, 1211, 1447
BslFI	GGGAC	3 cut(s)	30, 256, 1261
BslI	CCNNNNNNNGG	8 cut(s)	677, 888, 1153, 1210, 1271, 1564, 1639, 1728
BsmAI	GTCTC	4 cut(s)	1011, 1041, 1548, 1650
BsmFI	GGGAC	3 cut(s)	30, 256, 1261
BsmI	GAATGC	1 cut(s)	353
BsnI	GGCC	5 cut(s)	141, 1437, 1573, 1738, 1800
Bso31I	GGTCTC	3 cut(s)	1041, 1548, 1650
Bsp119I	TTCGAA	1 cut(s)	1494
Bsp1286I	GDGCHC	4 cut(s)	217, 1480, 1525, 1746
Bsp143I	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
BspACI	CCGC	6 cut(s)	250, 369, 637, 746, 756, 1125
BspANI	GGCC	5 cut(s)	141, 1437, 1573, 1738, 1800
BspCNI	CTCAG	4 cut(s)	1291, 1323, 1563, 1619
BspFNI	CGCG	4 cut(s)	1127, 1184, 1527, 1753
BspLI	GGNNCC	3 cut(s)	140, 1276, 1277
BspMAI	CTGCAG	1 cut(s)	573
BspPI	GGATC	4 cut(s)	662, 1401, 1551, 1740
BspQI	GCTCTTC	2 cut(s)	172, 1468
BspT104I	TTCGAA	1 cut(s)	1494
BspTNI	GGTCTC	3 cut(s)	1041, 1548, 1650
BsrDI	GCAATG	3 cut(s)	904, 1119, 1644
BsrFI	RCCGGY	2 cut(s)	1153, 1210
BsrI	ACTGG	2 cut(s)	1793, 1802
BssAI	RCCGGY	2 cut(s)	1153, 1210
BssECI	CCNNGG	5 cut(s)	599, 789, 1270, 1431, 1684
BssMI	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
BssT1I	CCWWGG	2 cut(s)	1270, 1431
Bst2UI	CCWGG	2 cut(s)	672, 791
Bst4CI	ACNGT	7 cut(s)	193, 408, 464, 630, 1035, 1066, 1503
Bst6I	CTCTTC	5 cut(s)	172, 525, 993, 1300, 1468
BstBI	TTCGAA	1 cut(s)	1494
BstC8I	GCNNGC	5 cut(s)	75, 573, 744, 1525, 1891
BstDEI	CTNAG	5 cut(s)	885, 1299, 1331, 1550, 1606
BstENI	CCTNNNNNAGG	1 cut(s)	1726
BstF5I	GGATG	6 cut(s)	244, 442, 727, 955, 1466, 1663
BstFNI	CGCG	4 cut(s)	1127, 1184, 1527, 1753
BstHHI	GCGC	2 cut(s)	1129, 1186
BstKTI	GATC	9 cut(s)	160, 624, 670, 920, 1294, 1396, 1546, 1728, 1735
BstMAI	GTCTC	4 cut(s)	1011, 1041, 1548, 1650
BstMBI	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
BstMWI	GCNNNNNNNGC	5 cut(s)	491, 581, 739, 1514, 1750
BstNI	CCWGG	2 cut(s)	672, 791
BstNSI	RCATGY	3 cut(s)	29, 83, 1139
BstSCI	CCNGG	2 cut(s)	670, 789
BstSFI	CTRYAG	2 cut(s)	171, 569
BstSLI	GKGCMC	2 cut(s)	217, 1746
BstUI	CGCG	4 cut(s)	1127, 1184, 1527, 1753
BstV1I	GCAGC	2 cut(s)	308, 555
BstV2I	GAAGAC	2 cut(s)	465, 1350
BstX2I	RGATCY	3 cut(s)	621, 917, 1291
BstYI	RGATCY	3 cut(s)	621, 917, 1291
BsuI	GTATCC	1 cut(s)	857
BsuRI	GGCC	5 cut(s)	141, 1437, 1573, 1738, 1800
BtsCI	GGATG	6 cut(s)	244, 442, 727, 955, 1466, 1663
Cac8I	GCNNGC	5 cut(s)	75, 573, 744, 1525, 1891
CfoI	GCGC	2 cut(s)	1129, 1186
Cfr10I	RCCGGY	2 cut(s)	1153, 1210
Cfr13I	GGNCC	6 cut(s)	139, 1156, 1213, 1275, 1435, 1799
CseI	GACGC	2 cut(s)	1047, 1190
Csp6I	GTAC	4 cut(s)	428, 1338, 1450, 1679
CviQI	GTAC	4 cut(s)	428, 1338, 1450, 1679
DdeI	CTNAG	5 cut(s)	885, 1299, 1331, 1550, 1606
DpnI	GATC	9 cut(s)	159, 623, 669, 919, 1293, 1395, 1545, 1727, 1734
DpnII	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
DrdI	GACNNNNNNGTC	1 cut(s)	1033
DseDI	GACNNNNNNGTC	1 cut(s)	1033
Eam1104I	CTCTTC	5 cut(s)	172, 525, 993, 1300, 1468
EarI	CTCTTC	5 cut(s)	172, 525, 993, 1300, 1468
EciI	GGCGGA	1 cut(s)	771
Ecl136II	GAGCTC	2 cut(s)	1478, 1523
Eco130I	CCWWGG	2 cut(s)	1270, 1431
Eco24I	GRGCYC	2 cut(s)	1480, 1525
Eco31I	GGTCTC	3 cut(s)	1041, 1548, 1650
Eco47I	GGWCC	3 cut(s)	1156, 1213, 1275
Eco53kI	GAGCTC	2 cut(s)	1478, 1523
Eco57I	CTGAAG	2 cut(s)	506, 1017
EcoICRI	GAGCTC	2 cut(s)	1478, 1523
EcoNI	CCTNNNNNAGG	1 cut(s)	1726
EcoO109I	RGGNCCY	3 cut(s)	139, 1275, 1435
EcoRII	CCWGG	2 cut(s)	670, 789
EcoT14I	CCWWGG	2 cut(s)	1270, 1431
EcoT38I	GRGCYC	2 cut(s)	1480, 1525
ErhI	CCWWGG	2 cut(s)	1270, 1431
FalI	AAGNNNNNCTT	2 cut(s)	295, 327
FaqI	GGGAC	3 cut(s)	30, 256, 1261
Fnu4HI	GCNGC	3 cut(s)	297, 569, 1125
FokI	GGATG	6 cut(s)	251, 449, 734, 942, 1473, 1670
FriOI	GRGCYC	2 cut(s)	1480, 1525
Fsp4HI	GCNGC	3 cut(s)	297, 569, 1125
FspBI	CTAG	6 cut(s)	84, 476, 921, 1019, 1271, 1406
GlaI	GCGC	2 cut(s)	1128, 1185
GluI	GCNGC	3 cut(s)	297, 569, 1125
GsuI	CTGGAG	1 cut(s)	570
HaeIII	GGCC	5 cut(s)	141, 1437, 1573, 1738, 1800
HapII	CCGG	3 cut(s)	1154, 1211, 1447
HgaI	GACGC	2 cut(s)	1047, 1190
HhaI	GCGC	2 cut(s)	1129, 1186
Hin6I	GCGC	2 cut(s)	1127, 1184
HinP1I	GCGC	2 cut(s)	1127, 1184
HincII	GTYRAC	1 cut(s)	1062
HindII	GTYRAC	1 cut(s)	1062
HinfI	GANTC	6 cut(s)	34, 699, 826, 853, 1004, 1788
HpaII	CCGG	3 cut(s)	1154, 1211, 1447
HphI	GGTGA	6 cut(s)	199, 241, 572, 1068, 1156, 1213
Hpy166II	GTNNAC	5 cut(s)	215, 563, 617, 1062, 1319
Hpy188I	TCNGA	3 cut(s)	1398, 1553, 1685
Hpy188III	TCNNGA	9 cut(s)	31, 38, 272, 290, 452, 817, 921, 1019, 1330
Hpy8I	GTNNAC	5 cut(s)	215, 563, 617, 1062, 1319
Hpy99I	CGWCG	4 cut(s)	158, 1175, 1229, 1878
HpyAV	CCTTC	6 cut(s)	47, 90, 675, 1025, 1264, 1501
HpyCH4III	ACNGT	7 cut(s)	193, 408, 464, 630, 1035, 1066, 1503
HpyCH4IV	ACGT	2 cut(s)	835, 1192
HpyCH4V	TGCA	7 cut(s)	215, 256, 351, 446, 571, 1464, 1637
HpyF10VI	GCNNNNNNNGC	5 cut(s)	491, 581, 739, 1514, 1750
HpyF3I	CTNAG	5 cut(s)	885, 1299, 1331, 1550, 1606
HpySE526I	ACGT	2 cut(s)	835, 1192
HspAI	GCGC	2 cut(s)	1127, 1184
KflI	GGGWCCC	1 cut(s)	1275
Kzo9I	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
LguI	GCTCTTC	2 cut(s)	172, 1468
LmnI	GCTCC	2 cut(s)	274, 589
Lsp1109I	GCAGC	2 cut(s)	308, 555
LweI	GCATC	3 cut(s)	712, 1451, 1830
MaeI	CTAG	6 cut(s)	84, 476, 921, 1019, 1271, 1406
MaeII	ACGT	2 cut(s)	835, 1192
MaeIII	GTNAC	6 cut(s)	86, 145, 187, 509, 1042, 1747
MalI	GATC	9 cut(s)	159, 623, 669, 919, 1293, 1395, 1545, 1727, 1734
MboI	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
MflI	RGATCY	3 cut(s)	621, 917, 1291
MhlI	GDGCHC	4 cut(s)	217, 1480, 1525, 1746
MlyI	GAGTC	3 cut(s)	693, 820, 1013
MmeI	TCCRAC	4 cut(s)	216, 387, 1183, 1240
MroXI	GAANNNNTTC	1 cut(s)	1253
MseI	TTAA	3 cut(s)	8, 1416, 1715
MslI	CAYNNNNRTG	2 cut(s)	435, 1702
MspA1I	CMGCKG	3 cut(s)	299, 568, 1537
MspI	CCGG	3 cut(s)	1154, 1211, 1447
MspR9I	CCNGG	2 cut(s)	672, 791
Mva1269I	GAATGC	1 cut(s)	353
MvaI	CCWGG	2 cut(s)	672, 791
MvnI	CGCG	4 cut(s)	1127, 1184, 1527, 1753
MwoI	GCNNNNNNNGC	5 cut(s)	491, 581, 739, 1514, 1750
NdeII	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
NlaIV	GGNNCC	3 cut(s)	140, 1276, 1277
NmeAIII	GCCGAG	1 cut(s)	624
NmuCI	GTSAC	1 cut(s)	187
NspI	RCATGY	3 cut(s)	29, 83, 1139
NspV	TTCGAA	1 cut(s)	1494
PciI	ACATGT	2 cut(s)	25, 1135
PciSI	GCTCTTC	2 cut(s)	172, 1468
PctI	GAATGC	1 cut(s)	353
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	3 cut(s)	34, 853, 1788
PflMI	CCANNNNNTGG	1 cut(s)	1639
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	3 cut(s)	298, 570, 1126
PleI	GAGTC	3 cut(s)	693, 820, 1012
PpsI	GAGTC	3 cut(s)	693, 820, 1012
PpuMI	RGGWCCY	1 cut(s)	1275
PscI	ACATGT	2 cut(s)	25, 1135
PshBI	ATTAAT	1 cut(s)	1416
Psp124BI	GAGCTC	2 cut(s)	1480, 1525
Psp5II	RGGWCCY	1 cut(s)	1275
Psp6I	CCWGG	2 cut(s)	670, 789
PspGI	CCWGG	2 cut(s)	670, 789
PspN4I	GGNNCC	3 cut(s)	140, 1276, 1277
PspPI	GGNCC	6 cut(s)	139, 1156, 1213, 1275, 1435, 1799
PspPPI	RGGWCCY	1 cut(s)	1275
PstI	CTGCAG	1 cut(s)	573
PsuI	RGATCY	3 cut(s)	621, 917, 1291
PvuII	CAGCTG	3 cut(s)	299, 568, 1537
RsaI	GTAC	4 cut(s)	429, 1339, 1451, 1680
RsaNI	GTAC	4 cut(s)	428, 1338, 1450, 1679
RseI	CAYNNNNRTG	2 cut(s)	435, 1702
SacI	GAGCTC	2 cut(s)	1480, 1525
SapI	GCTCTTC	2 cut(s)	172, 1468
SaqAI	TTAA	3 cut(s)	8, 1416, 1715
SatI	GCNGC	3 cut(s)	297, 569, 1125
Sau3AI	GATC	9 cut(s)	157, 621, 667, 917, 1291, 1393, 1543, 1725, 1732
Sau96I	GGNCC	6 cut(s)	139, 1156, 1213, 1275, 1435, 1799
SchI	GAGTC	3 cut(s)	693, 820, 1013
ScrFI	CCNGG	2 cut(s)	672, 791
SduI	GDGCHC	4 cut(s)	217, 1480, 1525, 1746
SfaNI	GCATC	3 cut(s)	712, 1451, 1830
SfcI	CTRYAG	2 cut(s)	171, 569
SfuI	TTCGAA	1 cut(s)	1494
SinI	GGWCC	3 cut(s)	1156, 1213, 1275
SmiMI	CAYNNNNRTG	2 cut(s)	435, 1702
SsiI	CCGC	6 cut(s)	250, 369, 637, 746, 756, 1125
SspI	AATATT	1 cut(s)	983
SspMI	CTAG	6 cut(s)	84, 476, 921, 1019, 1271, 1406
SstI	GAGCTC	2 cut(s)	1480, 1525
StyD4I	CCNGG	2 cut(s)	670, 789
StyI	CCWWGG	2 cut(s)	1270, 1431
TaaI	ACNGT	7 cut(s)	193, 408, 464, 630, 1035, 1066, 1503
TaiI	ACGT	2 cut(s)	838, 1195
TaqI	TCGA	6 cut(s)	829, 952, 1069, 1359, 1494, 1724
TatI	WGTACW	2 cut(s)	1337, 1678
TauI	GCSGC	1 cut(s)	1127
TfiI	GAWTC	3 cut(s)	34, 853, 1788
Tru1I	TTAA	3 cut(s)	8, 1416, 1715
Tru9I	TTAA	3 cut(s)	8, 1416, 1715
TseFI	GTSAC	1 cut(s)	187
TseI	GCWGC	2 cut(s)	296, 568
Tsp45I	GTSAC	1 cut(s)	187
TspDTI	ATGAA	4 cut(s)	60, 915, 1593, 1677
TspGWI	ACGGA	4 cut(s)	368, 493, 679, 1132
Van91I	CCANNNNNTGG	1 cut(s)	1639
VneI	GTGCAC	1 cut(s)	213
VpaK11BI	GGWCC	3 cut(s)	1156, 1213, 1275
VspI	ATTAAT	1 cut(s)	1416
XagI	CCTNNNNNAGG	1 cut(s)	1726
XapI	RAATTY	4 cut(s)	341, 654, 1580, 1664
XbaI	TCTAGA	2 cut(s)	920, 1018
XceI	RCATGY	3 cut(s)	29, 83, 1139
XmaJI	CCTAGG	1 cut(s)	1270
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	6 cut(s)	84, 476, 921, 1019, 1271, 1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.