Rroxscaffold_2G00123360
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
57204613 .. 57205326
714 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00123360.1

Sequence Viewer

Length: 237 bp
ATGGCGGCAGAGAAACCGTTCAAGAGTATATCGGAATCGCTTGAGAAGCCGGACGGCGGCGAGTTCGGAAAAGTAATTCGACGCATACTACCCCAACTAAAAGTGTTTCGAAGCCTCCGAATTCGGGGTTCGAATAAGGTGGATGGAAGTGTTGGTGGTCGAGGTGGGAGCTTTGCTGCATTGTACAAAGGGATTCCCATTTCGAGTGGACCTTCTACTACCATGGTGAATTCTTGA

Protein Analysis

78

Amino Acids

8.27

Weight (kDa)

10.43

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 57
AcsI RAATTY 2 cut(s) 120, 229
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 2 cut(s) 56, 124
AgsI TTSAA 1 cut(s) 22
AluBI AGCT 1 cut(s) 171
AluI AGCT 1 cut(s) 171
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 2 cut(s) 120, 229
Asp700I GAANNNNTTC 1 cut(s) 17
AspS9I GGNCC 1 cut(s) 209
AsuII TTCGAA 2 cut(s) 109, 131
AvaII GGWCC 1 cut(s) 209
BbvI GCAGC 1 cut(s) 163
BccI CCATC 1 cut(s) 137
BceAI ACGGC 1 cut(s) 70
BisI GCNGC 3 cut(s) 6, 58, 177
BlsI GCNGC 3 cut(s) 7, 59, 178
Bme18I GGWCC 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 209
Bpu14I TTCGAA 2 cut(s) 109, 131
BpuEI CTTGAG 1 cut(s) 62
BsaJI CCNNGG 1 cut(s) 222
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 124
BseDI CCNNGG 1 cut(s) 222
BseGI GGATG 1 cut(s) 148
BseLI CCNNNNNNNGG 2 cut(s) 56, 124
BseXI GCAGC 1 cut(s) 163
BsiSI CCGG 1 cut(s) 50
BslI CCNNNNNNNGG 2 cut(s) 56, 124
Bsp119I TTCGAA 2 cut(s) 109, 131
Bsp1407I TGTACA 1 cut(s) 183
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 2 cut(s) 5, 57
BspT104I TTCGAA 2 cut(s) 109, 131
BsrGI TGTACA 1 cut(s) 183
BssECI CCNNGG 1 cut(s) 222
BssT1I CCWWGG 1 cut(s) 222
Bst4CI ACNGT 1 cut(s) 18
BstAUI TGTACA 1 cut(s) 183
BstBI TTCGAA 2 cut(s) 109, 131
BstDSI CCRYGG 1 cut(s) 222
BstF5I GGATG 1 cut(s) 148
BstMWI GCNNNNNNNGC 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 163
BtgI CCRYGG 1 cut(s) 222
BtsCI GGATG 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 209
CseI GACGC 1 cut(s) 90
Csp6I GTAC 1 cut(s) 184
CviAII CATG 1 cut(s) 223
CviJI RGCY 3 cut(s) 49, 114, 171
CviKI_1 RGCY 3 cut(s) 49, 114, 171
CviQI GTAC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 209
EcoRI GAATTC 2 cut(s) 120, 229
EcoT14I CCWWGG 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 222
FaeI CATG 1 cut(s) 226
FaiI YATR 3 cut(s) 29, 86, 224
FatI CATG 1 cut(s) 222
Fnu4HI GCNGC 3 cut(s) 6, 58, 177
FokI GGATG 1 cut(s) 155
Fsp4HI GCNGC 3 cut(s) 6, 58, 177
GluI GCNGC 3 cut(s) 6, 58, 177
HapII CCGG 1 cut(s) 50
HgaI GACGC 1 cut(s) 90
Hin1II CATG 1 cut(s) 226
HinfI GANTC 2 cut(s) 35, 193
HpaII CCGG 1 cut(s) 50
Hpy166II GTNNAC 1 cut(s) 209
Hpy188I TCNGA 3 cut(s) 34, 68, 119
Hpy188III TCNNGA 2 cut(s) 22, 234
Hpy8I GTNNAC 1 cut(s) 209
Hpy99I CGWCG 1 cut(s) 84
HpyAV CCTTC 1 cut(s) 222
HpyCH4III ACNGT 1 cut(s) 18
HpyCH4V TGCA 1 cut(s) 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 46
Hsp92II CATG 1 cut(s) 226
LmnI GCTCC 1 cut(s) 168
LpnPI CCDG 1 cut(s) 63
Lsp1109I GCAGC 1 cut(s) 163
MluCI AATT 3 cut(s) 75, 120, 229
MnlI CCTC 2 cut(s) 125, 155
MroXI GAANNNNTTC 1 cut(s) 17
MspI CCGG 1 cut(s) 50
MwoI GCNNNNNNNGC 1 cut(s) 46
NcoI CCATGG 1 cut(s) 222
NlaIII CATG 1 cut(s) 226
NspV TTCGAA 2 cut(s) 109, 131
PcsI WCGNNNNNNNCGW 1 cut(s) 115
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 35, 193
PkrI GCNGC 3 cut(s) 7, 59, 178
PspPI GGNCC 1 cut(s) 209
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SatI GCNGC 3 cut(s) 6, 58, 177
Sau96I GGNCC 1 cut(s) 209
SetI ASST 4 cut(s) 141, 166, 173, 214
SfuI TTCGAA 2 cut(s) 109, 131
SgeI CNNG 7 cut(s) 34, 53, 62, 73, 137, 173, 216
SinI GGWCC 1 cut(s) 209
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
Sse9I AATT 3 cut(s) 75, 120, 229
SsiI CCGC 2 cut(s) 5, 57
StyI CCWWGG 1 cut(s) 222
TaaI ACNGT 1 cut(s) 18
TaqI TCGA 5 cut(s) 79, 109, 131, 160, 203
TasI AATT 3 cut(s) 75, 120, 229
TatI WGTACW 1 cut(s) 183
TauI GCSGC 2 cut(s) 8, 60
TfiI GAWTC 2 cut(s) 35, 193
TseI GCWGC 1 cut(s) 176
VpaK11BI GGWCC 1 cut(s) 209
XapI RAATTY 2 cut(s) 120, 229
XmnI GAANNNNTTC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.