Rh6AG104100
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
15369730 .. 15373362
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG104100.1

Sequence Viewer

Length: 1779 bp
ATGGAAGTCCTGGAAATGAGTAATGCTCTTGGCCAAATGAATGACTCCAATGAATCCCTGATGAGCAATCTGAATGAACTAGCTAGTGAGAGGGATCTTCTCCACGTTGAGATGCTAAATTTGAAAGAGAACCTGGAAAGGGAACAGGCACGGGCTGATGAATTTGAAGTGATTGCAAATGAAACTCAACAGATAGCCGAGTTAAGAAAGACCTATGCTGATGAAAAAGAGGCAGAGGTAAAGCTCTTAGAGCAGTCTATAGAAGAGCTCGAACGTACTGTCAATGTGCTACAAAATAAGGTTGATATTGTCAAGGAGGAGGCTGAACGGCAACGGTTGCATGGAGAAGAGCTTGAATCTGAACTTCATGCCGTAAAACATCAGATGCTGAATGTTGAAAATGCTAATGCTGACATGAGCAGACATATAGATGAGAAGGAGAAAAGCATTCAAGAAATTCAACGGAACGCACAAATCCTCGAGAGGGATATAGCTGAGAAGGATGCAGAGATTGCCCAATATAAAGCACATATCTCTGAGTTAAATTTGCATGCAGAAGCACAGGCTTGTGAATACAAGCAAAAGTTCAAGGCATTGGAAAACATGGCTGAACAAGTCAGACCCGAAGGCCATACGACTCATGCCATTAGTTCTGCACCTAACAAAACAGAGAAATATGCCACAAAGTCTAGAGGCTCTGGTTCCCCATTTAAATGTATTGGATTGGGCTTGGCACAACAAATAAAATCTGAGAAGGATGAGGAACTTACGGCTGCAAGGACCCGCATTGAAGAGCTTGAATCCTTAGCATTATGTCGACAGAAAGAGATATTTAATTTGAATGCCAGATTAGCTTCTGCCGAAAGCATGACCCATGATGTAATTCGGGATTTACTGGGAGTCAAGTTGGATATGACCACTTACGCGTCACTATTGGATAATCAACAAGTGCAGAAGATCACAGAGAAGGCCCGGATTCATAGTTTTGAATCTAAGGAAATGGAGCAGGAGGTAGTTAAGCTGAAGAAACAGCTTAATGAATTCATTGAGGAAAGAAGAGGATGGCTAGAGGAAATTGAACGAAAGCAGGCTGAAACCATAGCTGTGCAAATTGCTTTGGAAAAACTTCGACAGCGAGATCAGTTACACAAAACTGAAAATGAGGTGCTCAAGATGGAGAACATAAATCATAAAAAGAAGGTGAGGGAACTTGAAGGAGAAGTAGATAAACTGTCTGGGCAGCAAAACATCCAACAAAGAATCCATCATCATGCAAAAATCAAGGAAGAAAATCACATGCTAAAAACCCACAATGAAGAACTTAGCACTAAGCTTCGACGGACAGAGGTTCTTCTATCACGTTGCAAGGAAGAGCTTGCTCGCTATCGTGCTTCCATTGGGAGAAACCCTTATGTTGATTTTGATGAGGAGCAACGACTGAGTAACAAAGTGAAGGAAATTGAGGAGGAGAAGTTGCAGTTAGCACAAAAGTTATTAGGCCTGTGTACTAGTGTTCTAAAGGCTGCTGGAATAACAAAACCAATACCCCATATAAATCCTTCCATTGCGGAAGAGGCACTCGAGCAACTCAAGACCAAAGTTACTTCATTGGATAGAGAATTGCAAGATTTAAAGTTTAAGAATAAGATAACCAGTGAAAGACTTCGATTGTCAGAGCTCATGCCACAGACTTCGCCAAAAAACTCAAAACCAGATGAGAATTGCCAGACTCCAAGAAGAATGTCCCAAGCTCCATATTTTTCTACTTTAGATCGATGA

Protein Analysis

592

Amino Acids

68.44

Weight (kDa)

5.68

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 817
AccII CGCG 1 cut(s) 926
AciI CCGC 2 cut(s) 784, 1568
AclWI GGATC 1 cut(s) 102
AcoI YGGCCR 1 cut(s) 31
AcsI RAATTY 5 cut(s) 118, 161, 456, 544, 1040
AcuI CTGAAG 1 cut(s) 1043
AfaI GTAC 2 cut(s) 277, 1507
AfiI CCNNNNNNNGG 2 cut(s) 139, 484
AflIII ACRYGT 1 cut(s) 924
AhlI ACTAGT 1 cut(s) 1508
AjnI CCWGG 2 cut(s) 9, 132
Alw21I GWGCWC 3 cut(s) 270, 1170, 1680
AlwI GGATC 1 cut(s) 102
AlwNI CAGNNNCTG 1 cut(s) 388
Ama87I CYCGRG 2 cut(s) 479, 1580
AoxI GGCC 4 cut(s) 31, 628, 969, 1498
ApeKI GCWGC 3 cut(s) 773, 1240, 1523
ApoI RAATTY 5 cut(s) 118, 161, 456, 544, 1040
ArsI GACNNNNNNTTYG 2 cut(s) 264, 296
Asp700I GAANNNNTTC 2 cut(s) 1125, 1662
AspS9I GGNCC 2 cut(s) 780, 970
AsuC2I CCSGG 1 cut(s) 973
AsuHPI GGTGA 1 cut(s) 1213
AvaI CYCGRG 2 cut(s) 479, 1580
AvaII GGWCC 1 cut(s) 780
BalI TGGCCA 1 cut(s) 33
BanII GRGCYC 2 cut(s) 270, 1680
Bbv12I GWGCWC 3 cut(s) 270, 1170, 1680
BbvI GCAGC 3 cut(s) 760, 1252, 1510
BccI CCATC 3 cut(s) 1056, 1168, 1272
BceAI ACGGC 3 cut(s) 344, 356, 786
BciT130I CCWGG 2 cut(s) 11, 134
BcnI CCSGG 1 cut(s) 973
BcuI ACTAGT 1 cut(s) 1508
BfaI CTAG 5 cut(s) 80, 84, 690, 1067, 1509
BfmI CTRYAG 1 cut(s) 258
BisI GCNGC 3 cut(s) 774, 1241, 1524
BlsI GCNGC 3 cut(s) 775, 1242, 1525
Bme1390I CCNGG 3 cut(s) 11, 134, 973
Bme18I GGWCC 1 cut(s) 780
BmeT110I CYCGRG 2 cut(s) 479, 1580
BmgT120I GGNCC 2 cut(s) 780, 970
BmiI GGNNCC 2 cut(s) 703, 782
BmrFI CCNGG 3 cut(s) 11, 134, 973
BmrI ACTGGG 1 cut(s) 905
BmsI GCATC 3 cut(s) 102, 375, 493
BmuI ACTGGG 1 cut(s) 905
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 1 cut(s) 805
BpuEI CTTGAG 2 cut(s) 1154, 1574
BpuMI CCSGG 1 cut(s) 973
Bsa29I ATCGAT 1 cut(s) 1774
BsaXI ACNNNNNCTCC 2 cut(s) 1457, 1487
Bsc4I CCNNNNNNNGG 2 cut(s) 139, 484
Bse1I ACTGG 2 cut(s) 900, 1653
Bse3DI GCAATG 1 cut(s) 1563
BseBI CCWGG 2 cut(s) 11, 134
BseCI ATCGAT 1 cut(s) 1774
BseGI GGATG 4 cut(s) 508, 763, 1067, 1248
BseLI CCNNNNNNNGG 2 cut(s) 139, 484
BseMI GCAATG 1 cut(s) 1563
BseMII CTCAG 4 cut(s) 486, 528, 741, 1430
BseNI ACTGG 2 cut(s) 900, 1653
BseRI GAGGAG 4 cut(s) 332, 1442, 1478, 1481
BseXI GCAGC 3 cut(s) 760, 1252, 1510
BsgI GTGCAG 2 cut(s) 639, 971
Bsh1236I CGCG 1 cut(s) 926
BshFI GGCC 4 cut(s) 33, 630, 971, 1500
BshVI ATCGAT 1 cut(s) 1774
BsiHKAI GWGCWC 3 cut(s) 270, 1170, 1680
BsiHKCI CYCGRG 2 cut(s) 479, 1580
BsiSI CCGG 1 cut(s) 973
BslFI GGGAC 1 cut(s) 1729
BslI CCNNNNNNNGG 2 cut(s) 139, 484
BsmFI GGGAC 1 cut(s) 1729
BsmI GAATGC 2 cut(s) 447, 847
BsnI GGCC 4 cut(s) 33, 630, 971, 1500
BsoBI CYCGRG 2 cut(s) 479, 1580
Bsp1286I GDGCHC 3 cut(s) 270, 1170, 1680
Bsp143I GATC 4 cut(s) 94, 957, 1138, 1771
BspACI CCGC 2 cut(s) 784, 1568
BspANI GGCC 4 cut(s) 33, 630, 971, 1500
BspCNI CTCAG 4 cut(s) 487, 529, 742, 1431
BspDI ATCGAT 1 cut(s) 1774
BspFNI CGCG 1 cut(s) 926
BspLI GGNNCC 2 cut(s) 703, 782
BspPI GGATC 1 cut(s) 102
BspQI GCTCTTC 4 cut(s) 258, 342, 786, 1365
BsrDI GCAATG 1 cut(s) 1563
BsrI ACTGG 2 cut(s) 900, 1653
BssMI GATC 4 cut(s) 94, 957, 1138, 1771
Bst2UI CCWGG 2 cut(s) 11, 134
Bst4CI ACNGT 3 cut(s) 280, 336, 1233
Bst6I CTCTTC 6 cut(s) 258, 342, 786, 1051, 1365, 1566
BstAPI GCANNNNNTGC 2 cut(s) 337, 512
BstC8I GCNNGC 4 cut(s) 552, 1089, 1377, 1381
BstDEI CTNAG 9 cut(s) 247, 495, 537, 750, 805, 993, 1322, 1329, 1439
BstF5I GGATG 4 cut(s) 508, 763, 1067, 1248
BstFNI CGCG 1 cut(s) 926
BstKTI GATC 4 cut(s) 97, 960, 1141, 1774
BstMBI GATC 4 cut(s) 94, 957, 1138, 1771
BstMWI GCNNNNNNNGC 5 cut(s) 250, 337, 512, 851, 1574
BstNI CCWGG 2 cut(s) 11, 134
BstNSI RCATGY 2 cut(s) 554, 1300
BstSCI CCNGG 3 cut(s) 9, 132, 971
BstSFI CTRYAG 1 cut(s) 258
BstUI CGCG 1 cut(s) 926
BstV1I GCAGC 3 cut(s) 760, 1252, 1510
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
Bsu15I ATCGAT 1 cut(s) 1774
BsuRI GGCC 4 cut(s) 33, 630, 971, 1500
BsuTUI ATCGAT 1 cut(s) 1774
BtsCI GGATG 4 cut(s) 508, 763, 1067, 1248
BtsIMutI CAGTG 1 cut(s) 1660
Cac8I GCNNGC 4 cut(s) 552, 1089, 1377, 1381
CaiI CAGNNNCTG 1 cut(s) 388
Cfr13I GGNCC 2 cut(s) 780, 970
ClaI ATCGAT 1 cut(s) 1774
CseI GACGC 1 cut(s) 915
Csp6I GTAC 2 cut(s) 276, 1506
CviQI GTAC 2 cut(s) 276, 1506
DdeI CTNAG 9 cut(s) 247, 495, 537, 750, 805, 993, 1322, 1329, 1439
DpnI GATC 4 cut(s) 96, 959, 1140, 1773
DpnII GATC 4 cut(s) 94, 957, 1138, 1771
DraI TTTAAA 2 cut(s) 712, 1632
EaeI YGGCCR 1 cut(s) 31
Eam1104I CTCTTC 6 cut(s) 258, 342, 786, 1051, 1365, 1566
EarI CTCTTC 6 cut(s) 258, 342, 786, 1051, 1365, 1566
Ecl136II GAGCTC 2 cut(s) 268, 1678
Eco147I AGGCCT 1 cut(s) 1500
Eco24I GRGCYC 2 cut(s) 270, 1680
Eco47I GGWCC 1 cut(s) 780
Eco53kI GAGCTC 2 cut(s) 268, 1678
Eco57I CTGAAG 1 cut(s) 1043
Eco88I CYCGRG 2 cut(s) 479, 1580
EcoICRI GAGCTC 2 cut(s) 268, 1678
EcoO109I RGGNCCY 1 cut(s) 780
EcoRI GAATTC 1 cut(s) 1040
EcoRII CCWGG 2 cut(s) 9, 132
EcoT38I GRGCYC 2 cut(s) 270, 1680
FaqI GGGAC 1 cut(s) 1729
FauI CCCGC 1 cut(s) 791
FblI GTMKAC 1 cut(s) 817
Fnu4HI GCNGC 3 cut(s) 774, 1241, 1524
FokI GGATG 4 cut(s) 515, 770, 1074, 1235
FriOI GRGCYC 2 cut(s) 270, 1680
Fsp4HI GCNGC 3 cut(s) 774, 1241, 1524
FspBI CTAG 5 cut(s) 80, 84, 690, 1067, 1509
GluI GCNGC 3 cut(s) 774, 1241, 1524
HaeIII GGCC 4 cut(s) 33, 630, 971, 1500
HapII CCGG 1 cut(s) 973
HgaI GACGC 1 cut(s) 915
HincII GTYRAC 1 cut(s) 818
HindII GTYRAC 1 cut(s) 818
HindIII AAGCTT 1 cut(s) 1331
HpaII CCGG 1 cut(s) 973
HphI GGTGA 1 cut(s) 1213
Hpy166II GTNNAC 2 cut(s) 818, 1506
Hpy188I TCNGA 7 cut(s) 72, 361, 384, 538, 620, 751, 1675
Hpy188III TCNNGA 6 cut(s) 452, 481, 690, 887, 1171, 1591
Hpy8I GTNNAC 2 cut(s) 818, 1506
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 9 cut(s) 430, 493, 620, 748, 961, 1192, 1208, 1447, 1569
HpyCH4III ACNGT 3 cut(s) 280, 336, 1233
HpyCH4IV ACGT 3 cut(s) 105, 274, 1360
HpyF10VI GCNNNNNNNGC 5 cut(s) 250, 337, 512, 851, 1574
HpyF3I CTNAG 9 cut(s) 247, 495, 537, 750, 805, 993, 1322, 1329, 1439
HpySE526I ACGT 3 cut(s) 105, 274, 1360
Kzo9I GATC 4 cut(s) 94, 957, 1138, 1771
LguI GCTCTTC 4 cut(s) 258, 342, 786, 1365
LmnI GCTCC 3 cut(s) 1003, 1429, 1756
Lsp1109I GCAGC 3 cut(s) 760, 1252, 1510
LweI GCATC 3 cut(s) 102, 375, 493
MaeI CTAG 5 cut(s) 80, 84, 690, 1067, 1509
MaeII ACGT 3 cut(s) 105, 274, 1360
MaeIII GTNAC 4 cut(s) 927, 1143, 1442, 1600
MalI GATC 4 cut(s) 96, 959, 1140, 1773
MboI GATC 4 cut(s) 94, 957, 1138, 1771
MflI RGATCY 1 cut(s) 94
MhlI GDGCHC 3 cut(s) 270, 1170, 1680
MlsI TGGCCA 1 cut(s) 33
MluI ACGCGT 1 cut(s) 924
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 4 cut(s) 38, 631, 909, 1723
MmeI TCCRAC 2 cut(s) 888, 1276
Mox20I TGGCCA 1 cut(s) 33
MroXI GAANNNNTTC 2 cut(s) 1125, 1662
MscI TGGCCA 1 cut(s) 33
MseI TTAA 8 cut(s) 203, 542, 711, 834, 1017, 1035, 1631, 1638
MslI CAYNNNNRTG 4 cut(s) 429, 712, 1103, 1269
Msp20I TGGCCA 1 cut(s) 33
MspI CCGG 1 cut(s) 973
MspR9I CCNGG 3 cut(s) 11, 134, 973
Mva1269I GAATGC 2 cut(s) 447, 847
MvaI CCWGG 2 cut(s) 11, 134
MvnI CGCG 1 cut(s) 926
MwoI GCNNNNNNNGC 5 cut(s) 250, 337, 512, 851, 1574
NciI CCSGG 1 cut(s) 973
NdeII GATC 4 cut(s) 94, 957, 1138, 1771
NlaIV GGNNCC 2 cut(s) 703, 782
NmeAIII GCCGAG 1 cut(s) 223
NmuCI GTSAC 1 cut(s) 927
NspI RCATGY 2 cut(s) 554, 1300
PaeI GCATGC 1 cut(s) 554
PaeR7I CTCGAG 2 cut(s) 479, 1580
PceI AGGCCT 1 cut(s) 1500
PciSI GCTCTTC 4 cut(s) 258, 342, 786, 1365
PctI GAATGC 2 cut(s) 447, 847
PdmI GAANNNNTTC 2 cut(s) 1125, 1662
PfeI GAWTC 6 cut(s) 53, 356, 800, 976, 989, 1260
PfoI TCCNGGA 1 cut(s) 9
PkrI GCNGC 3 cut(s) 775, 1242, 1525
PleI GAGTC 4 cut(s) 38, 631, 908, 1723
PpsI GAGTC 4 cut(s) 38, 631, 908, 1723
PpuMI RGGWCCY 1 cut(s) 780
Psp124BI GAGCTC 2 cut(s) 270, 1680
Psp5II RGGWCCY 1 cut(s) 780
Psp6I CCWGG 2 cut(s) 9, 132
PspGI CCWGG 2 cut(s) 9, 132
PspN4I GGNNCC 2 cut(s) 703, 782
PspPI GGNCC 2 cut(s) 780, 970
PspPPI RGGWCCY 1 cut(s) 780
PspXI VCTCGAGB 1 cut(s) 1580
PstNI CAGNNNCTG 1 cut(s) 388
PsuI RGATCY 1 cut(s) 94
RsaI GTAC 2 cut(s) 277, 1507
RsaNI GTAC 2 cut(s) 276, 1506
RseI CAYNNNNRTG 4 cut(s) 429, 712, 1103, 1269
SacI GAGCTC 2 cut(s) 270, 1680
SalI GTCGAC 1 cut(s) 816
SapI GCTCTTC 4 cut(s) 258, 342, 786, 1365
SaqAI TTAA 8 cut(s) 203, 542, 711, 834, 1017, 1035, 1631, 1638
SatI GCNGC 3 cut(s) 774, 1241, 1524
Sau3AI GATC 4 cut(s) 94, 957, 1138, 1771
Sau96I GGNCC 2 cut(s) 780, 970
SchI GAGTC 4 cut(s) 38, 631, 909, 1723
ScrFI CCNGG 3 cut(s) 11, 134, 973
SduI GDGCHC 3 cut(s) 270, 1170, 1680
SfaNI GCATC 3 cut(s) 102, 375, 493
SfcI CTRYAG 1 cut(s) 258
Sfr274I CTCGAG 2 cut(s) 479, 1580
SinI GGWCC 1 cut(s) 780
SlaI CTCGAG 2 cut(s) 479, 1580
SmiI ATTTAAAT 1 cut(s) 712
SmiMI CAYNNNNRTG 4 cut(s) 429, 712, 1103, 1269
SmlI CTYRAG 4 cut(s) 479, 1169, 1580, 1589
SmoI CTYRAG 4 cut(s) 479, 1169, 1580, 1589
SpeI ACTAGT 1 cut(s) 1508
SphI GCATGC 1 cut(s) 554
SseBI AGGCCT 1 cut(s) 1500
SsiI CCGC 2 cut(s) 784, 1568
SspMI CTAG 5 cut(s) 80, 84, 690, 1067, 1509
SstI GAGCTC 2 cut(s) 270, 1680
StuI AGGCCT 1 cut(s) 1500
StyD4I CCNGG 3 cut(s) 9, 132, 971
SwaI ATTTAAAT 1 cut(s) 712
TaaI ACNGT 3 cut(s) 280, 336, 1233
TaiI ACGT 3 cut(s) 108, 277, 1363
TaqI TCGA 8 cut(s) 270, 480, 817, 1129, 1336, 1581, 1666, 1774
TatI WGTACW 1 cut(s) 1505
TfiI GAWTC 6 cut(s) 53, 356, 800, 976, 989, 1260
Tru1I TTAA 8 cut(s) 203, 542, 711, 834, 1017, 1035, 1631, 1638
Tru9I TTAA 8 cut(s) 203, 542, 711, 834, 1017, 1035, 1631, 1638
TscAI CASTG 1 cut(s) 1660
TseFI GTSAC 1 cut(s) 927
TseI GCWGC 3 cut(s) 773, 1240, 1523
Tsp45I GTSAC 1 cut(s) 927
TspGWI ACGGA 2 cut(s) 478, 1354
TspRI CASTG 1 cut(s) 1660
VpaK11BI GGWCC 1 cut(s) 780
XapI RAATTY 5 cut(s) 118, 161, 456, 544, 1040
XbaI TCTAGA 1 cut(s) 689
XceI RCATGY 2 cut(s) 554, 1300
XhoI CTCGAG 2 cut(s) 479, 1580
XmiI GTMKAC 1 cut(s) 817
XmnI GAANNNNTTC 2 cut(s) 1125, 1662
XspI CTAG 5 cut(s) 80, 84, 690, 1067, 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.