Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0253301 RchiOBHm_Chr7g0229551 |
| rosa_laevigata | RLG00000028730 |
| rosa_multiflora | Rmu_sc0019866.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00143890 Rroxscaffold_4G00331560 Rroxscaffold_7G00164500 Rroxscaffold_7G00166850 |
| rosa_samantha | Rh1DG067900 Rh1DG439300 Rh2AG137200 Rh4BG079100 |
| rosa_wichuraiana | Rw1G005220 Rw7G033140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 154 |
| AcuI | CTGAAG | 1 cut(s) | 105 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 15 |
| AgsI | TTSAA | 1 cut(s) | 277 |
| AluBI | AGCT | 2 cut(s) | 89, 106 |
| AluI | AGCT | 2 cut(s) | 89, 106 |
| AoxI | GGCC | 1 cut(s) | 151 |
| ApeKI | GCWGC | 3 cut(s) | 217, 248, 251 |
| AsuII | TTCGAA | 1 cut(s) | 173 |
| BbvI | GCAGC | 3 cut(s) | 229, 235, 238 |
| BfaI | CTAG | 1 cut(s) | 307 |
| BglII | AGATCT | 1 cut(s) | 268 |
| BisI | GCNGC | 4 cut(s) | 154, 218, 249, 252 |
| BlsI | GCNGC | 4 cut(s) | 155, 219, 250, 253 |
| BmsI | GCATC | 3 cut(s) | 217, 239, 252 |
| Bpu14I | TTCGAA | 1 cut(s) | 173 |
| BpuEI | CTTGAG | 3 cut(s) | 75, 128, 163 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 15 |
| BseGI | GGATG | 1 cut(s) | 267 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BseMII | CTCAG | 1 cut(s) | 87 |
| BseXI | GCAGC | 3 cut(s) | 229, 235, 238 |
| BshFI | GGCC | 1 cut(s) | 153 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BsnI | GGCC | 1 cut(s) | 153 |
| Bsp119I | TTCGAA | 1 cut(s) | 173 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspACI | CCGC | 1 cut(s) | 154 |
| BspANI | GGCC | 1 cut(s) | 153 |
| BspCNI | CTCAG | 1 cut(s) | 86 |
| BspT104I | TTCGAA | 1 cut(s) | 173 |
| BssMI | GATC | 1 cut(s) | 268 |
| BstBI | TTCGAA | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 2 cut(s) | 35, 158 |
| BstDEI | CTNAG | 2 cut(s) | 73, 210 |
| BstF5I | GGATG | 1 cut(s) | 267 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstV1I | GCAGC | 3 cut(s) | 229, 235, 238 |
| BstX2I | RGATCY | 1 cut(s) | 268 |
| BstYI | RGATCY | 1 cut(s) | 268 |
| BsuRI | GGCC | 1 cut(s) | 153 |
| BtsCI | GGATG | 1 cut(s) | 267 |
| Cac8I | GCNNGC | 2 cut(s) | 35, 158 |
| CviAII | CATG | 1 cut(s) | 234 |
| CviJI | RGCY | 4 cut(s) | 8, 89, 106, 153 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 89, 106, 153 |
| DdeI | CTNAG | 2 cut(s) | 73, 210 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 1 cut(s) | 105 |
| EcoT22I | ATGCAT | 1 cut(s) | 232 |
| FaeI | CATG | 1 cut(s) | 237 |
| FaiI | YATR | 2 cut(s) | 31, 235 |
| FatI | CATG | 1 cut(s) | 233 |
| Fnu4HI | GCNGC | 4 cut(s) | 154, 218, 249, 252 |
| FokI | GGATG | 1 cut(s) | 274 |
| Fsp4HI | GCNGC | 4 cut(s) | 154, 218, 249, 252 |
| FspBI | CTAG | 1 cut(s) | 307 |
| GluI | GCNGC | 4 cut(s) | 154, 218, 249, 252 |
| HaeIII | GGCC | 1 cut(s) | 153 |
| Hin1II | CATG | 1 cut(s) | 237 |
| HindIII | AAGCTT | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 1 cut(s) | 22 |
| Hpy8I | GTNNAC | 1 cut(s) | 121 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 4 cut(s) | 37, 160, 230, 254 |
| HpyF3I | CTNAG | 2 cut(s) | 73, 210 |
| Hsp92II | CATG | 1 cut(s) | 237 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LpnPI | CCDG | 3 cut(s) | 47, 96, 170 |
| Lsp1109I | GCAGC | 3 cut(s) | 229, 235, 238 |
| LweI | GCATC | 3 cut(s) | 217, 239, 252 |
| MaeI | CTAG | 1 cut(s) | 307 |
| MaeIII | GTNAC | 1 cut(s) | 284 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 37 |
| MflI | RGATCY | 1 cut(s) | 268 |
| MluCI | AATT | 1 cut(s) | 38 |
| MmeI | TCCRAC | 1 cut(s) | 78 |
| MnlI | CCTC | 3 cut(s) | 9, 118, 138 |
| Mph1103I | ATGCAT | 1 cut(s) | 232 |
| MseI | TTAA | 1 cut(s) | 201 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 1 cut(s) | 237 |
| NmuCI | GTSAC | 1 cut(s) | 284 |
| NsiI | ATGCAT | 1 cut(s) | 232 |
| NspV | TTCGAA | 1 cut(s) | 173 |
| PkrI | GCNGC | 4 cut(s) | 155, 219, 250, 253 |
| PsuI | RGATCY | 1 cut(s) | 268 |
| SaqAI | TTAA | 1 cut(s) | 201 |
| SatI | GCNGC | 4 cut(s) | 154, 218, 249, 252 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| SetI | ASST | 4 cut(s) | 20, 91, 108, 129 |
| SfaNI | GCATC | 3 cut(s) | 217, 239, 252 |
| SfuI | TTCGAA | 1 cut(s) | 173 |
| SmlI | CTYRAG | 3 cut(s) | 90, 107, 142 |
| SmoI | CTYRAG | 3 cut(s) | 90, 107, 142 |
| Sse9I | AATT | 1 cut(s) | 38 |
| SsiI | CCGC | 1 cut(s) | 154 |
| SspMI | CTAG | 1 cut(s) | 307 |
| TaqI | TCGA | 3 cut(s) | 23, 47, 173 |
| TasI | AATT | 1 cut(s) | 38 |
| TauI | GCSGC | 1 cut(s) | 156 |
| Tru1I | TTAA | 1 cut(s) | 201 |
| Tru9I | TTAA | 1 cut(s) | 201 |
| TseFI | GTSAC | 1 cut(s) | 284 |
| TseI | GCWGC | 3 cut(s) | 217, 248, 251 |
| Tsp45I | GTSAC | 1 cut(s) | 284 |
| TspDTI | ATGAA | 1 cut(s) | 83 |
| XspI | CTAG | 1 cut(s) | 307 |
| Zsp2I | ATGCAT | 1 cut(s) | 232 |