Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0253301 RchiOBHm_Chr7g0229551 |
| rosa_laevigata | RLG00000028730 |
| rosa_multiflora | Rmu_sc0019866.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00143890 Rroxscaffold_4G00331560 Rroxscaffold_7G00164500 Rroxscaffold_7G00166850 |
| rosa_samantha | Rh1DG067900 Rh1DG439300 Rh2AG137200 Rh4BG079100 |
| rosa_wichuraiana | Rw1G005220 Rw7G033140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 162 |
| AgsI | TTSAA | 3 cut(s) | 193, 215, 225 |
| AluBI | AGCT | 1 cut(s) | 22 |
| AluI | AGCT | 1 cut(s) | 22 |
| ApeKI | GCWGC | 4 cut(s) | 19, 133, 164, 167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 240 |
| BbvI | GCAGC | 4 cut(s) | 31, 145, 151, 154 |
| BciVI | GTATCC | 1 cut(s) | 100 |
| BfuI | GTATCC | 1 cut(s) | 100 |
| BglII | AGATCT | 1 cut(s) | 184 |
| BisI | GCNGC | 5 cut(s) | 20, 134, 162, 165, 168 |
| BlsI | GCNGC | 5 cut(s) | 21, 135, 163, 166, 169 |
| BmsI | GCATC | 3 cut(s) | 133, 155, 168 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 79 |
| BsaAI | YACGTR | 2 cut(s) | 152, 252 |
| BseXI | GCAGC | 4 cut(s) | 31, 145, 151, 154 |
| Bsp143I | GATC | 1 cut(s) | 184 |
| BspACI | CCGC | 1 cut(s) | 162 |
| BssMI | GATC | 1 cut(s) | 184 |
| BstBAI | YACGTR | 2 cut(s) | 152, 252 |
| BstKTI | GATC | 1 cut(s) | 187 |
| BstMBI | GATC | 1 cut(s) | 184 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstV1I | GCAGC | 4 cut(s) | 31, 145, 151, 154 |
| BstX2I | RGATCY | 1 cut(s) | 184 |
| BstYI | RGATCY | 1 cut(s) | 184 |
| BsuI | GTATCC | 1 cut(s) | 100 |
| CviJI | RGCY | 2 cut(s) | 22, 161 |
| CviKI_1 | RGCY | 2 cut(s) | 22, 161 |
| DpnI | GATC | 1 cut(s) | 186 |
| DpnII | GATC | 1 cut(s) | 184 |
| EcoT22I | ATGCAT | 1 cut(s) | 148 |
| FaiI | YATR | 1 cut(s) | 197 |
| Fnu4HI | GCNGC | 5 cut(s) | 20, 134, 162, 165, 168 |
| Fsp4HI | GCNGC | 5 cut(s) | 20, 134, 162, 165, 168 |
| GluI | GCNGC | 5 cut(s) | 20, 134, 162, 165, 168 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188III | TCNNGA | 1 cut(s) | 245 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyCH4IV | ACGT | 2 cut(s) | 151, 251 |
| HpyCH4V | TGCA | 4 cut(s) | 19, 76, 146, 170 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpySE526I | ACGT | 2 cut(s) | 151, 251 |
| Kzo9I | GATC | 1 cut(s) | 184 |
| LpnPI | CCDG | 1 cut(s) | 88 |
| Lsp1109I | GCAGC | 4 cut(s) | 31, 145, 151, 154 |
| LweI | GCATC | 3 cut(s) | 133, 155, 168 |
| MaeII | ACGT | 2 cut(s) | 151, 251 |
| MalI | GATC | 1 cut(s) | 186 |
| MboI | GATC | 1 cut(s) | 184 |
| MboII | GAAGA | 2 cut(s) | 187, 203 |
| MflI | RGATCY | 1 cut(s) | 184 |
| MluCI | AATT | 1 cut(s) | 123 |
| MnlI | CCTC | 3 cut(s) | 34, 54, 212 |
| Mph1103I | ATGCAT | 1 cut(s) | 148 |
| MroXI | GAANNNNTTC | 1 cut(s) | 240 |
| MseI | TTAA | 1 cut(s) | 116 |
| MspA1I | CMGCKG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 184 |
| NsiI | ATGCAT | 1 cut(s) | 148 |
| PdmI | GAANNNNTTC | 1 cut(s) | 240 |
| PkrI | GCNGC | 5 cut(s) | 21, 135, 163, 166, 169 |
| Ppu21I | YACGTR | 2 cut(s) | 152, 252 |
| PsuI | RGATCY | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 116 |
| SatI | GCNGC | 5 cut(s) | 20, 134, 162, 165, 168 |
| Sau3AI | GATC | 1 cut(s) | 184 |
| SetI | ASST | 6 cut(s) | 24, 45, 70, 154, 223, 254 |
| SfaNI | GCATC | 3 cut(s) | 133, 155, 168 |
| SgeI | CNNG | 8 cut(s) | 35, 52, 58, 70, 115, 152, 162, 194 |
| SmlI | CTYRAG | 2 cut(s) | 23, 58 |
| SmoI | CTYRAG | 2 cut(s) | 23, 58 |
| Sse9I | AATT | 1 cut(s) | 123 |
| SsiI | CCGC | 1 cut(s) | 162 |
| TaiI | ACGT | 2 cut(s) | 154, 254 |
| TaqI | TCGA | 2 cut(s) | 45, 89 |
| TasI | AATT | 1 cut(s) | 123 |
| TauI | GCSGC | 1 cut(s) | 164 |
| Tru1I | TTAA | 1 cut(s) | 116 |
| Tru9I | TTAA | 1 cut(s) | 116 |
| TseI | GCWGC | 4 cut(s) | 19, 133, 164, 167 |
| TspDTI | ATGAA | 1 cut(s) | 249 |
| XmnI | GAANNNNTTC | 1 cut(s) | 240 |
| Zsp2I | ATGCAT | 1 cut(s) | 148 |