Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0253301 RchiOBHm_Chr7g0229551 |
| rosa_laevigata | RLG00000028730 |
| rosa_multiflora | Rmu_sc0019866.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00143890 Rroxscaffold_4G00331560 Rroxscaffold_7G00164500 Rroxscaffold_7G00166850 |
| rosa_samantha | Rh1DG067900 Rh1DG439300 Rh2AG137200 Rh4BG079100 |
| rosa_wichuraiana | Rw1G005220 Rw7G033140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 190, 212 |
| ApeKI | GCWGC | 3 cut(s) | 130, 161, 164 |
| BbvI | GCAGC | 3 cut(s) | 142, 148, 151 |
| BciVI | GTATCC | 1 cut(s) | 97 |
| BfuI | GTATCC | 1 cut(s) | 97 |
| BglII | AGATCT | 1 cut(s) | 181 |
| BisI | GCNGC | 3 cut(s) | 131, 162, 165 |
| BlsI | GCNGC | 3 cut(s) | 132, 163, 166 |
| BmsI | GCATC | 3 cut(s) | 130, 152, 165 |
| BpuEI | CTTGAG | 2 cut(s) | 41, 76 |
| BsaAI | YACGTR | 1 cut(s) | 149 |
| BseGI | GGATG | 1 cut(s) | 180 |
| BseXI | GCAGC | 3 cut(s) | 142, 148, 151 |
| Bsp143I | GATC | 1 cut(s) | 181 |
| BssMI | GATC | 1 cut(s) | 181 |
| BstBAI | YACGTR | 1 cut(s) | 149 |
| BstF5I | GGATG | 1 cut(s) | 180 |
| BstKTI | GATC | 1 cut(s) | 184 |
| BstMBI | GATC | 1 cut(s) | 181 |
| BstV1I | GCAGC | 3 cut(s) | 142, 148, 151 |
| BstX2I | RGATCY | 1 cut(s) | 181 |
| BstYI | RGATCY | 1 cut(s) | 181 |
| BsuI | GTATCC | 1 cut(s) | 97 |
| BtsCI | GGATG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| DpnI | GATC | 1 cut(s) | 183 |
| DpnII | GATC | 1 cut(s) | 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 145 |
| FaiI | YATR | 1 cut(s) | 194 |
| Fnu4HI | GCNGC | 3 cut(s) | 131, 162, 165 |
| FokI | GGATG | 1 cut(s) | 187 |
| Fsp4HI | GCNGC | 3 cut(s) | 131, 162, 165 |
| GluI | GCNGC | 3 cut(s) | 131, 162, 165 |
| HinfI | GANTC | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 1 cut(s) | 20 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| Hpy99I | CGWCG | 1 cut(s) | 91 |
| HpyCH4IV | ACGT | 1 cut(s) | 148 |
| HpyCH4V | TGCA | 4 cut(s) | 73, 143, 167, 178 |
| HpySE526I | ACGT | 1 cut(s) | 148 |
| Kzo9I | GATC | 1 cut(s) | 181 |
| LpnPI | CCDG | 1 cut(s) | 85 |
| Lsp1109I | GCAGC | 3 cut(s) | 142, 148, 151 |
| LweI | GCATC | 3 cut(s) | 130, 152, 165 |
| MaeII | ACGT | 1 cut(s) | 148 |
| MalI | GATC | 1 cut(s) | 183 |
| MboI | GATC | 1 cut(s) | 181 |
| MboII | GAAGA | 2 cut(s) | 25, 200 |
| MflI | RGATCY | 1 cut(s) | 181 |
| MluCI | AATT | 1 cut(s) | 120 |
| MnlI | CCTC | 4 cut(s) | 31, 51, 165, 209 |
| Mph1103I | ATGCAT | 1 cut(s) | 145 |
| MseI | TTAA | 3 cut(s) | 113, 123, 233 |
| NdeII | GATC | 1 cut(s) | 181 |
| NsiI | ATGCAT | 1 cut(s) | 145 |
| PfeI | GAWTC | 1 cut(s) | 16 |
| PkrI | GCNGC | 3 cut(s) | 132, 163, 166 |
| Ppu21I | YACGTR | 1 cut(s) | 149 |
| PsuI | RGATCY | 1 cut(s) | 181 |
| SaqAI | TTAA | 3 cut(s) | 113, 123, 233 |
| SatI | GCNGC | 3 cut(s) | 131, 162, 165 |
| Sau3AI | GATC | 1 cut(s) | 181 |
| SetI | ASST | 3 cut(s) | 42, 67, 151 |
| SfaNI | GCATC | 3 cut(s) | 130, 152, 165 |
| SgeI | CNNG | 8 cut(s) | 32, 49, 55, 67, 112, 149, 159, 191 |
| SmlI | CTYRAG | 2 cut(s) | 20, 55 |
| SmoI | CTYRAG | 2 cut(s) | 20, 55 |
| Sse9I | AATT | 1 cut(s) | 120 |
| TaiI | ACGT | 1 cut(s) | 151 |
| TaqI | TCGA | 2 cut(s) | 42, 86 |
| TasI | AATT | 1 cut(s) | 120 |
| TfiI | GAWTC | 1 cut(s) | 16 |
| Tru1I | TTAA | 3 cut(s) | 113, 123, 233 |
| Tru9I | TTAA | 3 cut(s) | 113, 123, 233 |
| TscAI | CASTG | 1 cut(s) | 15 |
| TseI | GCWGC | 3 cut(s) | 130, 161, 164 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| TspRI | CASTG | 1 cut(s) | 15 |
| Zsp2I | ATGCAT | 1 cut(s) | 145 |