Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002469

Physical Location & Seq

Genomic Coordinates Reverse (-)

40181443 .. 40190107

Gene Structure 8665 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00246860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGATGGAGGACGAGGGATTAGAAGATTGGGACGACGCGGCTTTCGTCGAAGAACTCATCCAAGTACAGGAGCGCGTCATCTCCGATTCTCAGCCGCCGTTAAAACCGGAACCGCCGCCGTCCTCTTCGATTACCTACTCGCCTCCGCGCCACCTCTCGCAGCGCTCCAACGCCGTCTCCTCTTCCTCCGCATTGCCGCCGCGTGTTTGGACCTCCCAGAGGCTCGACAAGAATCCCGAAATTGGGCGCTTGAAGATGGCTGCTTCTTCTTCGGCATTGCCTCCTTGTGTTTCGGGCAACTCTGGATGTGATAAGGAACGCGAAATCGGGCGCTTGAAGATGGAGCTTGGGCATGTCTTGAAACAGCTTTCAGATTATGAACAAGAGTGCTCAGAACTGAAGAAGGAAAGAGACAAAAAAGATGAACAACTTCAGTTTGTACTCTCAAGGAATGAAAAGAAAGATGGAGCTGCTCGGAACTCTGATAGTGCAAATTTGGAATCTTCTGTACAATTACAAATGGCAAGAGGTTCAAGTCATCAGCCTAGTTCTCGGGTTCATATTGGTGTGTCAACCTCTAAAGCCACAGGCGTTCAAACTGATGAAACTAGTGCTTCTGCCCAAGCAATCCATAATGATGACCAGCATATTTCTGATAACCTCTCCAAGAAATTGCTAGCTATCTGGGGATCTCCAAATGAACAAGAGTTGGGAAAAAATGTCATATCCAATTTGCTTATGGCTTGCCAAACAGATTTCCATTCTCTTTCTGGGTGCATTGGCATGAATATATCCTCTAAACTGAGAATGGACACTGCAGGAGATGAAGGCTCGTGTATTGCAGCTTCACAGAATATGCACATATCTCGTAACCCAGAAGTTGCAAAAGTGTCTCATCTTTATTCTGTCTTGACCAAGGTCAATAATGGAATGATAAAGTTGGATGCTCTGTTTCAACCACTAGTTGACCTCTGCGGTCTTAAAAATGTGTTTCATTCAGTTCTTTCAGTCTGCTTCTTGCAGTTTGTTGATGAGTTGGTTCATTTTGGCATAGGAGCTAGAAATTGCACTCTACTCAGGGTCAATGTCATGGTCGAGGGACTCGTAAGAAGGAATCAGACATCTTATGTGGACTCTCTTCCATTTGGAATGGATTTTTATGCTGAAACTGAAAGCAAGAGTGGAGATTGGAAGAACGGTGTTGCAAATTTGGTTTCTCGCGTAGACTGGGTTTCACTTTTTGAGTTGATCGTACAAACTGCCATGAGGAATACAGAACACTGCCTAAGGCTACAAGCAGTCTCTATTATGAATGTCATTGTAATGAAAAGTAATGCTTTTATGGAGAGGGAGATGTTTGGCCGGACACTGGTGTTTGAAATGATCGCAAAATTGCTTGCAAAGGAAGCTGGTTTTGAGGTGCGAAAACAAGCCGTGCAACTTCTGTATATGCTACTGAATTGTCCTAAAATACTGGTTAAATTCTGTACCGGTTATAAAGAGGAGATGGATGCTGGTGCTAGGGATGAAAATGCAGGAGATGCTTTGACTTTTCAAAAGTACTGTATGATTCTTCAAGGATTGGCAGATTGTCTAGCTTGCTGTGGACACTGTCTAGAGGAGTTGATACTTTGCCGAAATGCTGTTCTTTTACTGGCTTTCCTAGCCTCATCTGGAATATCTGGCTTTGAAATACTTGCGAGTCACAAGCTGCTTCAAGATGCAAACTTTCTAATGTTAATATTACAAGTCTTGGCAGCAGAAGCAGATCAGACAGCAGTTAATACTAAGCAACAACATCAGCTTTACAAAGAAAGGACCTTGCTGGTACGGGAGGCCTTGATATTGCTTAACAGATTGGCGTCAAACCCATCATATTCTGCTACTGTCCTGCATGTATTAACAAACAGCAGAGACATGGCCAGTTTGGCCATTGATGTTGCGAGCAGGTTGTCCCGGAAAGACCAGATATATGAGAAGTTTGAATGCAGGCCGGAATCTGATATTGGTGACCTAGCTAGAGTATCAACAGTATACATGTTGCCACCAGAGCTGTGCGGTGCAAATTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

690

Amino Acids

76.36

Weight (kDa)

5.75

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45610 AT5G45610
fragaria_vesca	FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380 FvH4_5g23380
malus_domestica	MD06G1024600.v1.1
prunus_persica	Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1 Prupe.5G025700_v2.0.a1
pyrus_communis	pycom06g01990
rosa_chinensis	RchiOBHm_Chr7g0212401
rosa_laevigata	RLG00000002892 RLG00000018896
rosa_multiflora	Rmu_sc0001911.1_g000056 Rmu_sc0007576.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246860
rosa_rugosa	Rorug07G0133800 Rorug07G0133900
rosa_samantha	Rh2DG427300 Rh7AG266600 Rh7BG260700 Rh7CG283500 Rh7DG273600
rosa_wichuraiana	Rw7G022800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1497
Acc36I	ACCTGC	1 cut(s)	1938
AccI	GTMKAC	2 cut(s)	1224, 2034
AccII	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
AclWI	GGATC	1 cut(s)	697
AcoI	YGGCCR	3 cut(s)	1360, 1920, 1929
AcsI	RAATTY	4 cut(s)	493, 1207, 1481, 2065
AcuI	CTGAAG	2 cut(s)	416, 419
AcyI	GRCGYC	1 cut(s)	1862
AfaI	GTAC	7 cut(s)	66, 441, 510, 1254, 1489, 1562, 1830
AfeI	AGCGCT	1 cut(s)	164
AfiI	CCNNNNNNNGG	5 cut(s)	67, 219, 242, 243, 1369
AflIII	ACRYGT	1 cut(s)	2037
AgeI	ACCGGT	1 cut(s)	1490
AhlI	ACTAGT	2 cut(s)	608, 961
AjuI	GAANNNNNNNTTGG	2 cut(s)	1989, 2021
Alw21I	GWGCWC	1 cut(s)	392
Alw26I	GTCTC	5 cut(s)	181, 405, 897, 1306, 1908
AlwI	GGATC	1 cut(s)	697
Ama87I	CYCGRG	1 cut(s)	552
Aor51HI	AGCGCT	1 cut(s)	164
AoxI	GGCC	5 cut(s)	1360, 1836, 1920, 1929, 1991
ApeKI	GCWGC	6 cut(s)	160, 260, 470, 842, 1711, 1757
ApoI	RAATTY	4 cut(s)	493, 1207, 1481, 2065
ArsI	GACNNNNNNTTYG	2 cut(s)	26, 58
AsiGI	ACCGGT	1 cut(s)	1490
Asp700I	GAANNNNTTC	1 cut(s)	429
AspLEI	GCGC	5 cut(s)	75, 150, 165, 249, 333
AspS9I	GGNCC	2 cut(s)	210, 1818
AsuC2I	CCSGG	1 cut(s)	1957
AsuHPI	GGTGA	1 cut(s)	2021
AsuNHI	GCTAGC	1 cut(s)	676
AvaI	CYCGRG	1 cut(s)	552
AvaII	GGWCC	2 cut(s)	210, 1818
AxyI	CCTNAGG	1 cut(s)	1286
BalI	TGGCCA	2 cut(s)	1922, 1931
BarI	GAAGNNNNNNTAC	2 cut(s)	829, 861
BauI	CACGAG	1 cut(s)	832
Bbv12I	GWGCWC	1 cut(s)	392
BbvI	GCAGC	6 cut(s)	172, 247, 457, 854, 1698, 1769
BccI	CCATC	5 cut(s)	250, 334, 458, 1501, 1879
BceAI	ACGGC	4 cut(s)	82, 103, 158, 1418
BcgI	CGANNNNNNTGC	2 cut(s)	848, 882
BcnI	CCSGG	1 cut(s)	1957
BcoDI	GTCTC	5 cut(s)	181, 405, 897, 1306, 1908
BcuI	ACTAGT	2 cut(s)	608, 961
BfmI	CTRYAG	1 cut(s)	816
BfoI	RGCGCY	3 cut(s)	166, 250, 334
BfuAI	ACCTGC	1 cut(s)	1938
BglI	GCCNNNNNGGC	1 cut(s)	1928
BmcAI	AGTACT	1 cut(s)	1562
Bme1390I	CCNGG	1 cut(s)	1957
Bme18I	GGWCC	2 cut(s)	210, 1818
BmeT110I	CYCGRG	1 cut(s)	552
BmgT120I	GGNCC	2 cut(s)	210, 1818
BmiI	GGNNCC	1 cut(s)	111
BmrFI	CCNGG	1 cut(s)	1957
BmrI	ACTGGG	1 cut(s)	1237
BmsI	GCATC	4 cut(s)	934, 1501, 1531, 1711
BmtI	GCTAGC	1 cut(s)	680
BmuI	ACTGGG	1 cut(s)	1237
BoxI	GACNNNNGTC	1 cut(s)	917
BpuEI	CTTGAG	1 cut(s)	430
BpuMI	CCSGG	1 cut(s)	1957
BsaHI	GRCGYC	1 cut(s)	1862
BsaJI	CCNNGG	1 cut(s)	915
BsaWI	WCCGGW	2 cut(s)	106, 1490
BsaXI	ACNNNNNCTCC	2 cut(s)	161, 191
Bsc4I	CCNNNNNNNGG	5 cut(s)	67, 219, 242, 243, 1369
Bse118I	RCCGGY	1 cut(s)	1490
Bse1I	ACTGG	5 cut(s)	1232, 1374, 1479, 1659, 1923
Bse21I	CCTNAGG	1 cut(s)	1286
Bse3DI	GCAATG	2 cut(s)	191, 275
BseDI	CCNNGG	1 cut(s)	915
BseGI	GGATG	5 cut(s)	57, 311, 949, 1516, 1531
BseLI	CCNNNNNNNGG	5 cut(s)	67, 219, 242, 243, 1369
BseMI	GCAATG	2 cut(s)	191, 275
BseMII	CTCAG	4 cut(s)	104, 405, 794, 1090
BseNI	ACTGG	5 cut(s)	1232, 1374, 1479, 1659, 1923
BseRI	GAGGAG	3 cut(s)	169, 1517, 1634
BseXI	GCAGC	6 cut(s)	172, 247, 457, 854, 1698, 1769
Bsh1236I	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
BshFI	GGCC	5 cut(s)	1362, 1838, 1922, 1931, 1993
BshTI	ACCGGT	1 cut(s)	1490
BsiHKAI	GWGCWC	1 cut(s)	392
BsiHKCI	CYCGRG	1 cut(s)	552
BsiSI	CCGG	5 cut(s)	107, 1363, 1491, 1957, 1994
BslFI	GGGAC	3 cut(s)	44, 1113, 1939
BslI	CCNNNNNNNGG	5 cut(s)	67, 219, 242, 243, 1369
BsmAI	GTCTC	5 cut(s)	181, 405, 897, 1306, 1908
BsmBI	CGTCTC	1 cut(s)	181
BsmFI	GGGAC	3 cut(s)	44, 1113, 1939
BsmI	GAATGC	1 cut(s)	1991
BsnI	GGCC	5 cut(s)	1362, 1838, 1922, 1931, 1993
BsoBI	CYCGRG	1 cut(s)	552
Bsp1286I	GDGCHC	1 cut(s)	392
Bsp1407I	TGTACA	1 cut(s)	508
Bsp143I	GATC	4 cut(s)	689, 1248, 1383, 1768
BspANI	GGCC	5 cut(s)	1362, 1838, 1922, 1931, 1993
BspCNI	CTCAG	4 cut(s)	103, 404, 795, 1089
BspFNI	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
BspLI	GGNNCC	1 cut(s)	111
BspMAI	CTGCAG	1 cut(s)	820
BspMI	ACCTGC	1 cut(s)	1938
BspOI	GCTAGC	1 cut(s)	680
BspPI	GGATC	1 cut(s)	697
BsrDI	GCAATG	2 cut(s)	191, 275
BsrFI	RCCGGY	1 cut(s)	1490
BsrGI	TGTACA	1 cut(s)	508
BsrI	ACTGG	5 cut(s)	1232, 1374, 1479, 1659, 1923
BssAI	RCCGGY	1 cut(s)	1490
BssECI	CCNNGG	1 cut(s)	915
BssMI	GATC	4 cut(s)	689, 1248, 1383, 1768
BssNAI	GTATAC	1 cut(s)	2035
BssNI	GRCGYC	1 cut(s)	1862
BssSI	CACGAG	1 cut(s)	832
BssT1I	CCWWGG	1 cut(s)	915
Bst1107I	GTATAC	1 cut(s)	2035
Bst2BI	CACGAG	1 cut(s)	832
Bst4CI	ACNGT	5 cut(s)	1199, 1565, 1613, 1888, 2032
Bst6I	CTCTTC	3 cut(s)	130, 187, 1143
BstACI	GRCGYC	1 cut(s)	1862
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstAUI	TGTACA	1 cut(s)	508
BstC8I	GCNNGC	6 cut(s)	678, 745, 1398, 1600, 1945, 1991
BstDEI	CTNAG	7 cut(s)	90, 391, 803, 1076, 1286, 1788, 2070
BstEII	GGTNACC	1 cut(s)	2009
BstENI	CCTNNNNNAGG	1 cut(s)	217
BstF5I	GGATG	5 cut(s)	57, 311, 949, 1516, 1531
BstFNI	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
BstH2I	RGCGCY	3 cut(s)	166, 250, 334
BstHHI	GCGC	5 cut(s)	75, 150, 165, 249, 333
BstKTI	GATC	4 cut(s)	692, 1251, 1386, 1771
BstMAI	GTCTC	5 cut(s)	181, 405, 897, 1306, 1908
BstMBI	GATC	4 cut(s)	689, 1248, 1383, 1768
BstMWI	GCNNNNNNNGC	6 cut(s)	1406, 1541, 1664, 1763, 1928, 2050
BstNSI	RCATGY	3 cut(s)	356, 1898, 2041
BstPAI	GACNNNNGTC	1 cut(s)	917
BstPI	GGTNACC	1 cut(s)	2009
BstSCI	CCNGG	1 cut(s)	1955
BstSFI	CTRYAG	1 cut(s)	816
BstUI	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
BstV1I	GCAGC	6 cut(s)	172, 247, 457, 854, 1698, 1769
BstX2I	RGATCY	1 cut(s)	689
BstYI	RGATCY	1 cut(s)	689
BstZ17I	GTATAC	1 cut(s)	2035
Bsu36I	CCTNAGG	1 cut(s)	1286
BsuRI	GGCC	5 cut(s)	1362, 1838, 1922, 1931, 1993
BtsCI	GGATG	5 cut(s)	57, 311, 949, 1516, 1531
BtsI	GCAGTG	2 cut(s)	813, 1279
BtsIMutI	CAGTG	4 cut(s)	813, 1279, 1367, 1609
BveI	ACCTGC	1 cut(s)	1938
Cac8I	GCNNGC	6 cut(s)	678, 745, 1398, 1600, 1945, 1991
CfoI	GCGC	5 cut(s)	75, 150, 165, 249, 333
Cfr10I	RCCGGY	1 cut(s)	1490
Cfr13I	GGNCC	2 cut(s)	210, 1818
CseI	GACGC	3 cut(s)	44, 64, 1851
Csp6I	GTAC	7 cut(s)	65, 440, 509, 1253, 1488, 1561, 1829
CspAI	ACCGGT	1 cut(s)	1490
CviAII	CATG	7 cut(s)	353, 784, 1090, 1264, 1895, 1918, 2038
CviQI	GTAC	7 cut(s)	65, 440, 509, 1253, 1488, 1561, 1829
DdeI	CTNAG	7 cut(s)	90, 391, 803, 1076, 1286, 1788, 2070
DpnI	GATC	4 cut(s)	691, 1250, 1385, 1770
DpnII	GATC	4 cut(s)	689, 1248, 1383, 1768
EaeI	YGGCCR	3 cut(s)	1360, 1920, 1929
Eam1104I	CTCTTC	3 cut(s)	130, 187, 1143
EarI	CTCTTC	3 cut(s)	130, 187, 1143
Eco130I	CCWWGG	1 cut(s)	915
Eco147I	AGGCCT	1 cut(s)	1838
Eco47I	GGWCC	2 cut(s)	210, 1818
Eco47III	AGCGCT	1 cut(s)	164
Eco57I	CTGAAG	2 cut(s)	416, 419
Eco81I	CCTNAGG	1 cut(s)	1286
Eco88I	CYCGRG	1 cut(s)	552
Eco91I	GGTNACC	1 cut(s)	2009
EcoNI	CCTNNNNNAGG	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1818
EcoO65I	GGTNACC	1 cut(s)	2009
EcoT14I	CCWWGG	1 cut(s)	915
ErhI	CCWWGG	1 cut(s)	915
Esp3I	CGTCTC	1 cut(s)	181
FaeI	CATG	7 cut(s)	356, 787, 1093, 1267, 1898, 1921, 2041
FalI	AAGNNNNNCTT	2 cut(s)	1321, 1353
FaqI	GGGAC	3 cut(s)	44, 1113, 1939
FatI	CATG	7 cut(s)	352, 783, 1089, 1263, 1894, 1917, 2037
FblI	GTMKAC	2 cut(s)	1224, 2034
FokI	GGATG	5 cut(s)	44, 318, 956, 1523, 1538
GlaI	GCGC	5 cut(s)	74, 149, 164, 248, 332
HaeII	RGCGCY	3 cut(s)	166, 250, 334
HaeIII	GGCC	5 cut(s)	1362, 1838, 1922, 1931, 1993
HapII	CCGG	5 cut(s)	107, 1363, 1491, 1957, 1994
HgaI	GACGC	3 cut(s)	44, 64, 1851
HhaI	GCGC	5 cut(s)	75, 150, 165, 249, 333
Hin1I	GRCGYC	1 cut(s)	1862
Hin1II	CATG	7 cut(s)	356, 787, 1093, 1267, 1898, 1921, 2041
Hin6I	GCGC	5 cut(s)	73, 148, 163, 247, 331
HinP1I	GCGC	5 cut(s)	73, 148, 163, 247, 331
HincII	GTYRAC	2 cut(s)	573, 967
HindII	GTYRAC	2 cut(s)	573, 967
HinfI	GANTC	9 cut(s)	86, 232, 500, 1101, 1114, 1133, 1570, 1702, 1997
HpaII	CCGG	5 cut(s)	107, 1363, 1491, 1957, 1994
HphI	GGTGA	1 cut(s)	2021
Hpy166II	GTNNAC	6 cut(s)	573, 967, 1132, 1225, 1607, 2035
Hpy188I	TCNGA	9 cut(s)	85, 373, 394, 477, 484, 655, 1119, 1773, 2002
Hpy188III	TCNNGA	7 cut(s)	236, 303, 358, 910, 1616, 1674, 1718
Hpy8I	GTNNAC	6 cut(s)	573, 967, 1132, 1225, 1607, 2035
Hpy99I	CGWCG	2 cut(s)	38, 50
HpyAV	CCTTC	3 cut(s)	397, 821, 1104
HpyCH4III	ACNGT	5 cut(s)	1199, 1565, 1613, 1888, 2032
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1406, 1541, 1664, 1763, 1928, 2050
HpyF3I	CTNAG	7 cut(s)	90, 391, 803, 1076, 1286, 1788, 2070
Hsp92I	GRCGYC	1 cut(s)	1862
Hsp92II	CATG	7 cut(s)	356, 787, 1093, 1267, 1898, 1921, 2041
HspAI	GCGC	5 cut(s)	73, 148, 163, 247, 331
Kzo9I	GATC	4 cut(s)	689, 1248, 1383, 1768
LmnI	GCTCC	5 cut(s)	70, 170, 343, 467, 1055
Lsp1109I	GCAGC	6 cut(s)	172, 247, 457, 854, 1698, 1769
LweI	GCATC	4 cut(s)	934, 1501, 1531, 1711
MaeIII	GTNAC	3 cut(s)	869, 1703, 2009
MalI	GATC	4 cut(s)	691, 1250, 1385, 1770
MboI	GATC	4 cut(s)	689, 1248, 1383, 1768
MflI	RGATCY	1 cut(s)	689
MhlI	GDGCHC	1 cut(s)	392
MlsI	TGGCCA	2 cut(s)	1922, 1931
MluNI	TGGCCA	2 cut(s)	1922, 1931
MlyI	GAGTC	3 cut(s)	1095, 1127, 1711
MmeI	TCCRAC	2 cut(s)	192, 921
Mox20I	TGGCCA	2 cut(s)	1922, 1931
MroXI	GAANNNNTTC	1 cut(s)	429
MscI	TGGCCA	2 cut(s)	1922, 1931
MseI	TTAA	7 cut(s)	101, 981, 1479, 1739, 1782, 1851, 1901
MslI	CAYNNNNRTG	4 cut(s)	564, 636, 782, 1322
Msp20I	TGGCCA	2 cut(s)	1922, 1931
MspI	CCGG	5 cut(s)	107, 1363, 1491, 1957, 1994
MspR9I	CCNGG	1 cut(s)	1957
Mva1269I	GAATGC	1 cut(s)	1991
MvnI	CGCG	6 cut(s)	38, 75, 148, 202, 321, 1221
MwoI	GCNNNNNNNGC	6 cut(s)	1406, 1541, 1664, 1763, 1928, 2050
NciI	CCSGG	1 cut(s)	1957
NdeII	GATC	4 cut(s)	689, 1248, 1383, 1768
NheI	GCTAGC	1 cut(s)	676
NlaIII	CATG	7 cut(s)	356, 787, 1093, 1267, 1898, 1921, 2041
NlaIV	GGNNCC	1 cut(s)	111
NmuCI	GTSAC	2 cut(s)	1703, 2009
NspI	RCATGY	3 cut(s)	356, 1898, 2041
PceI	AGGCCT	1 cut(s)	1838
PciI	ACATGT	1 cut(s)	2037
PcsI	WCGNNNNNNNCGW	2 cut(s)	42, 1101
PctI	GAATGC	1 cut(s)	1991
PdmI	GAANNNNTTC	1 cut(s)	429
PfeI	GAWTC	6 cut(s)	86, 232, 500, 1114, 1570, 1997
PflFI	GACNNNGTC	1 cut(s)	1611
PfoI	TCCNGGA	1 cut(s)	1955
PinAI	ACCGGT	1 cut(s)	1490
PleI	GAGTC	3 cut(s)	1095, 1127, 1710
PpsI	GAGTC	3 cut(s)	1095, 1127, 1710
PpuMI	RGGWCCY	1 cut(s)	1818
PscI	ACATGT	1 cut(s)	2037
PshAI	GACNNNNGTC	1 cut(s)	917
PsiI	TTATAA	1 cut(s)	1497
Psp5II	RGGWCCY	1 cut(s)	1818
PspEI	GGTNACC	1 cut(s)	2009
PspN4I	GGNNCC	1 cut(s)	111
PspPI	GGNCC	2 cut(s)	210, 1818
PspPPI	RGGWCCY	1 cut(s)	1818
PstI	CTGCAG	1 cut(s)	820
PsuI	RGATCY	1 cut(s)	689
PsyI	GACNNNGTC	1 cut(s)	1611
RsaI	GTAC	7 cut(s)	66, 441, 510, 1254, 1489, 1562, 1830
RsaNI	GTAC	7 cut(s)	65, 440, 509, 1253, 1488, 1561, 1829
RseI	CAYNNNNRTG	4 cut(s)	564, 636, 782, 1322
SaqAI	TTAA	7 cut(s)	101, 981, 1479, 1739, 1782, 1851, 1901
Sau3AI	GATC	4 cut(s)	689, 1248, 1383, 1768
Sau96I	GGNCC	2 cut(s)	210, 1818
ScaI	AGTACT	1 cut(s)	1562
SchI	GAGTC	3 cut(s)	1095, 1127, 1711
ScrFI	CCNGG	1 cut(s)	1957
SduI	GDGCHC	1 cut(s)	392
SfaNI	GCATC	4 cut(s)	934, 1501, 1531, 1711
SfcI	CTRYAG	1 cut(s)	816
SfiI	GGCCNNNNNGGCC	1 cut(s)	1928
SinI	GGWCC	2 cut(s)	210, 1818
SmiMI	CAYNNNNRTG	4 cut(s)	564, 636, 782, 1322
SmlI	CTYRAG	1 cut(s)	445
SmoI	CTYRAG	1 cut(s)	445
SpeI	ACTAGT	2 cut(s)	608, 961
SseBI	AGGCCT	1 cut(s)	1838
SspI	AATATT	1 cut(s)	1743
StuI	AGGCCT	1 cut(s)	1838
StyD4I	CCNGG	1 cut(s)	1955
StyI	CCWWGG	1 cut(s)	915
TaaI	ACNGT	5 cut(s)	1199, 1565, 1613, 1888, 2032
TaqI	TCGA	4 cut(s)	48, 128, 225, 1095
TatI	WGTACW	4 cut(s)	64, 439, 508, 1560
TauI	GCSGC	5 cut(s)	41, 97, 118, 199, 202
TfiI	GAWTC	6 cut(s)	86, 232, 500, 1114, 1570, 1997
Tru1I	TTAA	7 cut(s)	101, 981, 1479, 1739, 1782, 1851, 1901
Tru9I	TTAA	7 cut(s)	101, 981, 1479, 1739, 1782, 1851, 1901
TscAI	CASTG	4 cut(s)	820, 1286, 1374, 1616
TseFI	GTSAC	2 cut(s)	1703, 2009
TseI	GCWGC	6 cut(s)	160, 260, 470, 842, 1711, 1757
Tsp45I	GTSAC	2 cut(s)	1703, 2009
TspRI	CASTG	4 cut(s)	820, 1286, 1374, 1616
Tth111I	GACNNNGTC	1 cut(s)	1611
VpaK11BI	GGWCC	2 cut(s)	210, 1818
XagI	CCTNNNNNAGG	1 cut(s)	217
XapI	RAATTY	4 cut(s)	493, 1207, 1481, 2065
XbaI	TCTAGA	1 cut(s)	1615
XceI	RCATGY	3 cut(s)	356, 1898, 2041
XcmI	CCANNNNNNNNNTGG	2 cut(s)	736, 767
XmiI	GTMKAC	2 cut(s)	1224, 2034
XmnI	GAANNNNTTC	1 cut(s)	429
ZrmI	AGTACT	1 cut(s)	1562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.