No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0274291 |
| rosa_roxburghii | Rroxscaffold_3G00256910 |
| rosa_rugosa | Rorug02G0329500 Rorug02G0329600 Rorug02G0329700 Rorug05G0138200 Rorug05G0138200 Rorug05G0138300 Rorug05G0138400.1 |
| rosa_samantha | Rh1CG103800 Rh1CG136300 Rh1DG132600 Rh2AG516900 Rh2CG501700 Rh3DG365400 Rh6DG191400 Rh7AG280200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 158 |
| AcsI | RAATTY | 2 cut(s) | 137, 182 |
| AcuI | CTGAAG | 1 cut(s) | 226 |
| AgsI | TTSAA | 1 cut(s) | 35 |
| AluBI | AGCT | 1 cut(s) | 193 |
| AluI | AGCT | 1 cut(s) | 193 |
| ApoI | RAATTY | 2 cut(s) | 137, 182 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 198 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BseGI | GGATG | 1 cut(s) | 142 |
| Bsh1236I | CGCG | 1 cut(s) | 158 |
| BsmI | GAATGC | 1 cut(s) | 252 |
| Bsp68I | TCGCGA | 1 cut(s) | 158 |
| BspFNI | CGCG | 1 cut(s) | 158 |
| BspHI | TCATGA | 2 cut(s) | 261, 269 |
| BstF5I | GGATG | 1 cut(s) | 142 |
| BstFNI | CGCG | 1 cut(s) | 158 |
| BstUI | CGCG | 1 cut(s) | 158 |
| BtgZI | GCGATG | 1 cut(s) | 139 |
| BtsCI | GGATG | 1 cut(s) | 142 |
| BtsI | GCAGTG | 1 cut(s) | 257 |
| BtsIMutI | CAGTG | 1 cut(s) | 257 |
| BtuMI | TCGCGA | 1 cut(s) | 158 |
| CciI | TCATGA | 2 cut(s) | 261, 269 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| CviAII | CATG | 3 cut(s) | 131, 262, 270 |
| CviJI | RGCY | 4 cut(s) | 21, 40, 193, 235 |
| CviKI_1 | RGCY | 4 cut(s) | 21, 40, 193, 235 |
| DraI | TTTAAA | 1 cut(s) | 181 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| Eco57I | CTGAAG | 1 cut(s) | 226 |
| FaeI | CATG | 3 cut(s) | 134, 265, 273 |
| FaiI | YATR | 3 cut(s) | 132, 263, 271 |
| FatI | CATG | 3 cut(s) | 130, 261, 269 |
| FokI | GGATG | 1 cut(s) | 129 |
| FspBI | CTAG | 1 cut(s) | 198 |
| Hin1II | CATG | 3 cut(s) | 134, 265, 273 |
| HinfI | GANTC | 1 cut(s) | 112 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 2 cut(s) | 188, 245 |
| Hpy188III | TCNNGA | 3 cut(s) | 157, 262, 270 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 1 cut(s) | 250 |
| Hsp92II | CATG | 3 cut(s) | 134, 265, 273 |
| LmnI | GCTCC | 1 cut(s) | 122 |
| LpnPI | CCDG | 2 cut(s) | 26, 216 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeIII | GTNAC | 1 cut(s) | 10 |
| MluCI | AATT | 4 cut(s) | 50, 137, 167, 182 |
| MseI | TTAA | 1 cut(s) | 180 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| Mva1269I | GAATGC | 1 cut(s) | 252 |
| MvnI | CGCG | 1 cut(s) | 158 |
| NlaIII | CATG | 3 cut(s) | 134, 265, 273 |
| NmuCI | GTSAC | 1 cut(s) | 10 |
| NruI | TCGCGA | 1 cut(s) | 158 |
| PagI | TCATGA | 2 cut(s) | 261, 269 |
| PctI | GAATGC | 1 cut(s) | 252 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| RruI | TCGCGA | 1 cut(s) | 158 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| SetI | ASST | 2 cut(s) | 195, 203 |
| SinI | GGWCC | 1 cut(s) | 46 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| Sse9I | AATT | 4 cut(s) | 50, 137, 167, 182 |
| SspMI | CTAG | 1 cut(s) | 198 |
| TasI | AATT | 4 cut(s) | 50, 137, 167, 182 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TscAI | CASTG | 1 cut(s) | 257 |
| TseFI | GTSAC | 1 cut(s) | 10 |
| Tsp45I | GTSAC | 1 cut(s) | 10 |
| TspDTI | ATGAA | 4 cut(s) | 62, 131, 250, 258 |
| TspRI | CASTG | 1 cut(s) | 257 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XapI | RAATTY | 2 cut(s) | 137, 182 |
| XspI | CTAG | 1 cut(s) | 198 |