Uncharacterised ACR, YagE family COG1723
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0274291 |
| rosa_roxburghii | Rroxscaffold_3G00256910 |
| rosa_rugosa | Rorug02G0329500 Rorug02G0329600 Rorug02G0329700 Rorug05G0138200 Rorug05G0138200 Rorug05G0138300 Rorug05G0138400.1 |
| rosa_samantha | Rh1CG103800 Rh1CG136300 Rh1DG132600 Rh2AG516900 Rh2CG501700 Rh3DG365400 Rh6DG191400 Rh7AG280200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 134, 179 |
| AdeI | CACNNNGTG | 1 cut(s) | 96 |
| AfaI | GTAC | 2 cut(s) | 29, 289 |
| AgsI | TTSAA | 1 cut(s) | 35 |
| AluBI | AGCT | 2 cut(s) | 112, 190 |
| AluI | AGCT | 2 cut(s) | 112, 190 |
| AoxI | GGCC | 1 cut(s) | 38 |
| ApeKI | GCWGC | 1 cut(s) | 299 |
| ApoI | RAATTY | 2 cut(s) | 134, 179 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BbvI | GCAGC | 1 cut(s) | 286 |
| BfaI | CTAG | 1 cut(s) | 195 |
| BisI | GCNGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 1 cut(s) | 301 |
| BmcAI | AGTACT | 1 cut(s) | 289 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BmrI | ACTGGG | 1 cut(s) | 290 |
| BmuI | ACTGGG | 1 cut(s) | 290 |
| Bse118I | RCCGGY | 1 cut(s) | 40 |
| Bse1I | ACTGG | 2 cut(s) | 285, 295 |
| Bse3DI | GCAATG | 1 cut(s) | 269 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseMI | GCAATG | 1 cut(s) | 269 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseNI | ACTGG | 2 cut(s) | 285, 295 |
| BseXI | GCAGC | 1 cut(s) | 286 |
| BshFI | GGCC | 1 cut(s) | 40 |
| BsiSI | CCGG | 1 cut(s) | 41 |
| BsmI | GAATGC | 1 cut(s) | 249 |
| BsnI | GGCC | 1 cut(s) | 40 |
| BspANI | GGCC | 1 cut(s) | 40 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspHI | TCATGA | 1 cut(s) | 258 |
| BsrDI | GCAATG | 1 cut(s) | 269 |
| BsrFI | RCCGGY | 1 cut(s) | 40 |
| BsrI | ACTGG | 2 cut(s) | 285, 295 |
| BssAI | RCCGGY | 1 cut(s) | 40 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 319 |
| BstDEI | CTNAG | 1 cut(s) | 93 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 229, 319 |
| BstV1I | GCAGC | 1 cut(s) | 286 |
| BsuRI | GGCC | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| BtsI | GCAGTG | 2 cut(s) | 254, 301 |
| BtsIMutI | CAGTG | 3 cut(s) | 90, 254, 301 |
| CciI | TCATGA | 1 cut(s) | 258 |
| Cfr10I | RCCGGY | 1 cut(s) | 40 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| Csp6I | GTAC | 2 cut(s) | 28, 288 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 132, 167 |
| CviAII | CATG | 2 cut(s) | 259, 330 |
| CviJI | RGCY | 6 cut(s) | 21, 40, 112, 190, 223, 232 |
| CviKI_1 | RGCY | 6 cut(s) | 21, 40, 112, 190, 223, 232 |
| CviQI | GTAC | 2 cut(s) | 28, 288 |
| DdeI | CTNAG | 1 cut(s) | 93 |
| DraI | TTTAAA | 1 cut(s) | 178 |
| DraIII | CACNNNGTG | 1 cut(s) | 96 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| FaeI | CATG | 2 cut(s) | 262, 333 |
| FaiI | YATR | 6 cut(s) | 168, 260, 315, 317, 324, 331 |
| FatI | CATG | 2 cut(s) | 258, 329 |
| FauNDI | CATATG | 1 cut(s) | 315 |
| Fnu4HI | GCNGC | 1 cut(s) | 300 |
| FokI | GGATG | 1 cut(s) | 126 |
| Fsp4HI | GCNGC | 1 cut(s) | 300 |
| FspBI | CTAG | 1 cut(s) | 195 |
| GluI | GCNGC | 1 cut(s) | 300 |
| HaeIII | GGCC | 1 cut(s) | 40 |
| HapII | CCGG | 1 cut(s) | 41 |
| Hin1II | CATG | 2 cut(s) | 262, 333 |
| HindIII | AAGCTT | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 41 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 1 cut(s) | 259 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyCH4IV | ACGT | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 2 cut(s) | 247, 322 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 229, 319 |
| HpyF3I | CTNAG | 1 cut(s) | 93 |
| HpySE526I | ACGT | 1 cut(s) | 149 |
| Hsp92II | CATG | 2 cut(s) | 262, 333 |
| LmnI | GCTCC | 1 cut(s) | 119 |
| LpnPI | CCDG | 6 cut(s) | 54, 72, 213, 266, 276, 323 |
| Lsp1109I | GCAGC | 1 cut(s) | 286 |
| MaeI | CTAG | 1 cut(s) | 195 |
| MaeII | ACGT | 1 cut(s) | 149 |
| MluCI | AATT | 4 cut(s) | 50, 134, 163, 179 |
| MnlI | CCTC | 1 cut(s) | 66 |
| MseI | TTAA | 1 cut(s) | 177 |
| MspI | CCGG | 1 cut(s) | 41 |
| Mva1269I | GAATGC | 1 cut(s) | 249 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 229, 319 |
| NdeI | CATATG | 1 cut(s) | 315 |
| NlaIII | CATG | 2 cut(s) | 262, 333 |
| PagI | TCATGA | 1 cut(s) | 258 |
| PctI | GAATGC | 1 cut(s) | 249 |
| PkrI | GCNGC | 1 cut(s) | 301 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| RsaI | GTAC | 2 cut(s) | 29, 289 |
| RsaNI | GTAC | 2 cut(s) | 28, 288 |
| SaqAI | TTAA | 1 cut(s) | 177 |
| SatI | GCNGC | 1 cut(s) | 300 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| ScaI | AGTACT | 1 cut(s) | 289 |
| SetI | ASST | 6 cut(s) | 29, 114, 133, 152, 192, 200 |
| SinI | GGWCC | 1 cut(s) | 46 |
| Sse9I | AATT | 4 cut(s) | 50, 134, 163, 179 |
| SspMI | CTAG | 1 cut(s) | 195 |
| TaiI | ACGT | 1 cut(s) | 152 |
| TasI | AATT | 4 cut(s) | 50, 134, 163, 179 |
| TatI | WGTACW | 1 cut(s) | 287 |
| Tru1I | TTAA | 1 cut(s) | 177 |
| Tru9I | TTAA | 1 cut(s) | 177 |
| TscAI | CASTG | 3 cut(s) | 97, 254, 301 |
| TseI | GCWGC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 4 cut(s) | 62, 128, 247, 255 |
| TspRI | CASTG | 3 cut(s) | 97, 254, 301 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XapI | RAATTY | 2 cut(s) | 134, 179 |
| XspI | CTAG | 1 cut(s) | 195 |
| ZrmI | AGTACT | 1 cut(s) | 289 |