Rh1CG103800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
21399825 .. 21405478
5654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG103800.1

Sequence Viewer

Length: 192 bp
ATGAGAATGACAAAGTACAATGACGTTGTGACTGATTCTATGGTACTTCAAAGGCTGGTGGACCGATTCCCTCCTTTAAAGGCATTTCATTTTGTCCTTGACGACACTGATGAGAGAAGTGACATTCCACATTCACCTGTTATGTATGTACATCTGATTGTGGAGATCGACAAAACAAATATTCCAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.43

Weight (kDa)

5.79

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 17, 45, 150
AgsI TTSAA 1 cut(s) 50
AspS9I GGNCC 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 126
AvaII GGWCC 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 61
BmgT120I GGNCC 1 cut(s) 61
Bsp1407I TGTACA 1 cut(s) 148
Bsp143I GATC 1 cut(s) 165
BsrGI TGTACA 1 cut(s) 148
BssMI GATC 1 cut(s) 165
BstAUI TGTACA 1 cut(s) 148
BstKTI GATC 1 cut(s) 168
BstMBI GATC 1 cut(s) 165
BtsIMutI CAGTG 1 cut(s) 105
Cfr13I GGNCC 1 cut(s) 61
Csp6I GTAC 3 cut(s) 16, 44, 149
CviJI RGCY 1 cut(s) 55
CviKI_1 RGCY 1 cut(s) 55
CviQI GTAC 3 cut(s) 16, 44, 149
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
DraI TTTAAA 1 cut(s) 78
Eco47I GGWCC 1 cut(s) 61
FaiI YATR 3 cut(s) 41, 143, 147
HinfI GANTC 2 cut(s) 35, 66
HphI GGTGA 1 cut(s) 126
Hpy166II GTNNAC 1 cut(s) 61
Hpy188I TCNGA 1 cut(s) 156
Hpy8I GTNNAC 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 24
HpySE526I ACGT 1 cut(s) 24
Kzo9I GATC 1 cut(s) 165
LpnPI CCDG 2 cut(s) 41, 150
MaeII ACGT 1 cut(s) 24
MaeIII GTNAC 2 cut(s) 28, 119
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MnlI CCTC 1 cut(s) 81
MseI TTAA 1 cut(s) 77
NdeII GATC 1 cut(s) 165
NmuCI GTSAC 2 cut(s) 28, 119
PfeI GAWTC 2 cut(s) 35, 66
PspPI GGNCC 1 cut(s) 61
RsaI GTAC 3 cut(s) 17, 45, 150
RsaNI GTAC 3 cut(s) 16, 44, 149
SaqAI TTAA 1 cut(s) 77
Sau3AI GATC 1 cut(s) 165
Sau96I GGNCC 1 cut(s) 61
SetI ASST 2 cut(s) 27, 139
SgeI CNNG 3 cut(s) 68, 110, 149
SinI GGWCC 1 cut(s) 61
SspI AATATT 1 cut(s) 181
TaiI ACGT 1 cut(s) 27
TaqI TCGA 1 cut(s) 168
TaqII GACCGA 1 cut(s) 78
TatI WGTACW 2 cut(s) 15, 148
TfiI GAWTC 2 cut(s) 35, 66
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 2 cut(s) 28, 119
Tsp45I GTSAC 2 cut(s) 28, 119
TspDTI ATGAA 1 cut(s) 77
TspRI CASTG 1 cut(s) 112
VpaK11BI GGWCC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.