Rroxscaffold_4G00283080

receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0012362
Physical Location & Seq
Reverse (-)
5109545 .. 5113029
3485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00283080.1

Sequence Viewer

Length: 1848 bp
ATGGCCATCACAGTTTTCCTTTTCACCTTGCTATTGTTCTTCACACACCCACCGCATGTTTATGGAAACACAGAGCTGAGAGCACTCATGGACATCAAGGCCCTTTTGGACCCGCAGAGTCTGTACCTTTCTTCATGGACTGTCCATGGAGACCCGTGTGACGGGTCGTTTGAAGGTATTGGGTGCAACAAAGCGGGTCGGGTAGCCAACATTTCATTGCAAGGAAAAGGGCTATCTGGGAAGCTGTCTCCTGCCGTTGGAGAGCTCAAGGATTTGACTGGGATGTACATGCATTATAACTCTTTGAAGGGAGAGATACCCAGAGAGATTGCCAACTTGACTCAGCTCAGTGACTTGTATTTGAATGTCAATAATCTAAGTGGAGAGATTCCTCCTGAGATCGGAAACATGGGCAGCTTAGAAGTTTTGCAGCTTTGCTATAATCAGCTAACTGGAAGCATACCAACGCAGCTGGGGTCTTTGAAGAACCTTAGTGTTCTTGCTCTGCAGTCCAACCAGTTAACTGGTGCAATTCCAGCAAGTTTAGGAAACTTGGAAATGCTAATGAGACTGGATTTGAGCTACAACAACCTCTTTGGTTCTATTCCCATGAAAGTAGCTGATGCACCTTTGCTTGAAGTTCTAGACATTCGGAATAATACCCTTTCTGGCAATGTACCTCTTGCTCTGAAGAGACTAAATGATGGATTCTCTTATGAAAACAATCTGGGATTGTGTGGATCTGGATTTATGTCCTTAACAGCCTGCAACACTTCAAGTCATCTAAACGCAAGTAGACCTGAACCCTTTGGATCAACTAAGCCAACACGAGCTATCCCGGAGACTGCAAATGTGCAGTTGCCTTGCAACCAATCTCGGTGCTCAAATATGTCAAAATCCCATCAAGCATCTGTTGCTGTTGTTGTTGGTATTGTTGTACTAACAATTGCATTATCGGCTATAGGAATTCTACTCTTCACACAGCATCGTCGCCGGAAACAGAAGCTTGGGTCCTCATTTGATGTTTCTGATGCCCGCCTTAGTGTTGATGAGGCCAAGGCGAGGGGTGTAGCTCACAGGAAATATGGCTCTCCCCTTATGAGCCTTGAGTATTCTCATGGGTGGGATCCTTTAGCTGATGGGAGGAATTTAAGTGCATTTGCCCAAGACGTGTTCCATAGCTTTAAATTCAATTTGGAAGAGGTGGAGACTGCTACTCAGTATTTCTCCGAGGTGAATCTATTGGGAAAGAGTAACTTCTCTGCAACCTATAAAGGAATATTACGAGATGGGACTGTTGTGGCTGTTAAGAGCATTGGAAAAACTTGCTGCAAGACTGAGGAAGCGGAGTTCTTGAAGGGGTTGAACATGTTAACCTCATTGAAGCATGAAAATTTAGTGAAATTGAGGGGATTTTGTTGCTCAAGGGGCCGCGGAGAGTGCTTTCTCATTTATGAATTTGTTCCAAATGGAAGTTTGCTGCGATATCTTGATGTCAAGGAGGGCGACAGCAATGTTCTTGAATGGTCAACTAGAGTTTCTATTGTGAAGGGCATTGCTAAAGGTCTATCTTATTTACATGGATATAAGCCAAACAAACCTGCCCTTGTTCACCAAAACATTTCGGCTGAAAAGGTGCTGATTGACCAGCGATTCAACCCCTTGCTCTCAGATTCCGGCCTGCACAAGCTTCTTACCAATGATGTTGTCTTCTCAGCACTCAAGGCCAGCGCTGCTATGGGATACCTAGCTCCAGAGTACACAACTACTGGACGATTTACAGAGAAAAGTGATGTTTATGCATTTGGGGTGCTTGTTTTCCAAATTCTATCGGGAAACGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

615

Amino Acids

66.97

Weight (kDa)

8.45

Isoelectric Point (pI)

28.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 23 - 63 4.1e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 80 - 219 3.7e-11 Leucine-rich repeat region
LRR_8 PF13855 139 - 198 4.2e-08 Leucine rich repeat
Pkinase PF00069 410 - 613 3.4e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 413 - 611 1.2e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012362)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51560
fragaria_vesca FvH4_7g28070
malus_domestica MD01G1184900.v1.1 MD07G1257200.v1.1
prunus_persica Prupe.2G281400_v2.0.a1
pyrus_communis pycom01g19660 pycom07g23010 pycom07g23020
rosa_chinensis RchiOBHm_Chr1g0375021
rosa_laevigata RLG00000026697
rosa_multiflora Rmu_sc0000554.1_g000005 Rmu_sc0017099.1_g000006
rosa_roxburghii Rroxscaffold_4G00283080
rosa_rugosa Rorug01G0387500
rosa_samantha Rh1AG398100 Rh1BG362000 Rh1CG375700 Rh1DG393200
rosa_wichuraiana Rw1G035330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 297
Acc36I ACCTGC 1 cut(s) 1609
AccI GTMKAC 1 cut(s) 796
AccII CGCG 1 cut(s) 1434
AciI CCGC 7 cut(s) 53, 113, 194, 1036, 1346, 1432, 1434
AclWI GGATC 4 cut(s) 748, 820, 1121, 1134
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 6 cut(s) 966, 1147, 1187, 1393, 1457, 1824
AcuI CTGAAG 1 cut(s) 710
AfaI GTAC 5 cut(s) 125, 287, 678, 939, 1760
AfeI AGCGCT 1 cut(s) 1732
AfiI CCNNNNNNNGG 4 cut(s) 161, 257, 401, 1062
AflIII ACRYGT 2 cut(s) 1170, 1368
AjiI CACGTC 1 cut(s) 1171
AloI GAACNNNNNNTCC 2 cut(s) 1334, 1366
Alw21I GWGCWC 3 cut(s) 85, 267, 884
Alw26I GTCTC 6 cut(s) 144, 252, 562, 688, 836, 1202
AlwI GGATC 4 cut(s) 748, 820, 1121, 1134
AlwNI CAGNNNCTG 1 cut(s) 121
Aor51HI AGCGCT 1 cut(s) 1732
AoxI GGCC 6 cut(s) 3, 99, 1053, 1429, 1678, 1725
ApeKI GCWGC 6 cut(s) 414, 430, 469, 1329, 1480, 1733
ApoI RAATTY 6 cut(s) 966, 1147, 1187, 1393, 1457, 1824
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
Asp700I GAANNNNTTC 1 cut(s) 1461
AspLEI GCGC 1 cut(s) 1733
AspS9I GGNCC 4 cut(s) 100, 109, 1011, 1429
AsuC2I CCSGG 1 cut(s) 839
AsuHPI GGTGA 3 cut(s) 16, 1246, 1604
AvaII GGWCC 2 cut(s) 109, 1011
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1126
BanII GRGCYC 1 cut(s) 267
BauI CACGAG 1 cut(s) 828
BbsI GAAGAC 1 cut(s) 1702
Bbv12I GWGCWC 3 cut(s) 85, 267, 884
BbvI GCAGC 6 cut(s) 426, 442, 481, 1316, 1467, 1720
BccI CCATC 5 cut(s) 14, 698, 909, 1133, 1283
BceAI ACGGC 1 cut(s) 239
BciVI GTATCC 1 cut(s) 1736
BcnI CCSGG 1 cut(s) 839
BcoDI GTCTC 6 cut(s) 144, 252, 562, 688, 836, 1202
BfaI CTAG 3 cut(s) 644, 1533, 1748
BfmI CTRYAG 2 cut(s) 506, 960
BfoI RGCGCY 1 cut(s) 1734
BfuAI ACCTGC 1 cut(s) 1609
BfuI GTATCC 1 cut(s) 1736
BisI GCNGC 7 cut(s) 415, 431, 470, 1330, 1432, 1481, 1734
BlsI GCNGC 7 cut(s) 416, 432, 471, 1331, 1433, 1482, 1735
Bme1390I CCNGG 1 cut(s) 839
Bme18I GGWCC 2 cut(s) 109, 1011
BmgBI CACGTC 1 cut(s) 1171
BmgT120I GGNCC 4 cut(s) 100, 109, 1011, 1429
BmiI GGNNCC 4 cut(s) 111, 1012, 1128, 1430
BmrFI CCNGG 1 cut(s) 839
BmrI ACTGGG 1 cut(s) 288
BmsI GCATC 4 cut(s) 613, 917, 994, 1021
BmuI ACTGGG 1 cut(s) 288
BpiI GAAGAC 1 cut(s) 1702
BpmI CTGGAG 1 cut(s) 1737
BpuEI CTTGAG 4 cut(s) 251, 1127, 1408, 1706
BpuMI CCSGG 1 cut(s) 839
BsaI GGTCTC 1 cut(s) 144
BsaJI CCNNGG 4 cut(s) 145, 1056, 1230, 1432
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 257, 401, 1062
Bse1I ACTGG 6 cut(s) 283, 457, 517, 529, 576, 1774
Bse3DI GCAATG 4 cut(s) 215, 679, 1519, 1554
BseDI CCNNGG 4 cut(s) 145, 1056, 1230, 1432
BseGI GGATG 1 cut(s) 288
BseLI CCNNNNNNNGG 4 cut(s) 161, 257, 401, 1062
BseMI GCAATG 4 cut(s) 215, 679, 1519, 1554
BseMII CTCAG 8 cut(s) 68, 356, 361, 387, 1232, 1329, 1683, 1728
BseNI ACTGG 6 cut(s) 283, 457, 517, 529, 576, 1774
BseXI GCAGC 6 cut(s) 426, 442, 481, 1316, 1467, 1720
BseYI CCCAGC 1 cut(s) 472
BsgI GTGCAG 2 cut(s) 875, 1667
Bsh1236I CGCG 1 cut(s) 1434
BshFI GGCC 6 cut(s) 5, 101, 1055, 1431, 1680, 1727
BsiHKAI GWGCWC 3 cut(s) 85, 267, 884
BsiSI CCGG 3 cut(s) 839, 994, 1677
BslFI GGGAC 1 cut(s) 1306
BslI CCNNNNNNNGG 4 cut(s) 161, 257, 401, 1062
BsmAI GTCTC 6 cut(s) 144, 252, 562, 688, 836, 1202
BsmFI GGGAC 1 cut(s) 1306
BsnI GGCC 6 cut(s) 5, 101, 1055, 1431, 1680, 1727
Bso31I GGTCTC 1 cut(s) 144
Bsp1286I GDGCHC 3 cut(s) 85, 267, 884
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 4 cut(s) 399, 740, 812, 1126
Bsp19I CCATGG 1 cut(s) 145
BspACI CCGC 7 cut(s) 53, 113, 194, 1036, 1346, 1432, 1434
BspANI GGCC 6 cut(s) 5, 101, 1055, 1431, 1680, 1727
BspCNI CTCAG 8 cut(s) 69, 355, 360, 388, 1231, 1330, 1682, 1727
BspFNI CGCG 1 cut(s) 1434
BspLI GGNNCC 4 cut(s) 111, 1012, 1128, 1430
BspMAI CTGCAG 1 cut(s) 510
BspMI ACCTGC 1 cut(s) 1609
BspPI GGATC 4 cut(s) 748, 820, 1121, 1134
BspTNI GGTCTC 1 cut(s) 144
BsrDI GCAATG 4 cut(s) 215, 679, 1519, 1554
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 6 cut(s) 283, 457, 517, 529, 576, 1774
BssECI CCNNGG 4 cut(s) 145, 1056, 1230, 1432
BssMI GATC 4 cut(s) 399, 740, 812, 1126
BssSI CACGAG 1 cut(s) 828
BssT1I CCWWGG 2 cut(s) 145, 1056
Bst2BI CACGAG 1 cut(s) 828
Bst4CI ACNGT 3 cut(s) 13, 142, 1297
Bst6I CTCTTC 3 cut(s) 686, 980, 1194
BstAPI GCANNNNNTGC 1 cut(s) 914
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 4 cut(s) 766, 1036, 1682, 1729
BstDSI CCRYGG 2 cut(s) 145, 1432
BstF5I GGATG 1 cut(s) 288
BstFNI CGCG 1 cut(s) 1434
BstH2I RGCGCY 1 cut(s) 1734
BstHHI GCGC 1 cut(s) 1733
BstKTI GATC 4 cut(s) 402, 743, 815, 1129
BstMAI GTCTC 6 cut(s) 144, 252, 562, 688, 836, 1202
BstMBI GATC 4 cut(s) 399, 740, 812, 1126
BstMWI GCNNNNNNNGC 7 cut(s) 536, 914, 956, 1428, 1440, 1724, 1733
BstNSI RCATGY 3 cut(s) 59, 292, 1372
BstSCI CCNGG 1 cut(s) 837
BstSFI CTRYAG 2 cut(s) 506, 960
BstUI CGCG 1 cut(s) 1434
BstV1I GCAGC 6 cut(s) 426, 442, 481, 1316, 1467, 1720
BstV2I GAAGAC 1 cut(s) 1702
BstX2I RGATCY 2 cut(s) 740, 1126
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 2 cut(s) 740, 1126
BsuI GTATCC 1 cut(s) 1736
BsuRI GGCC 6 cut(s) 5, 101, 1055, 1431, 1680, 1727
BtgI CCRYGG 2 cut(s) 145, 1432
BtrI CACGTC 1 cut(s) 1171
BtsCI GGATG 1 cut(s) 288
BtsIMutI CAGTG 1 cut(s) 355
BveI ACCTGC 1 cut(s) 1609
Cac8I GCNNGC 4 cut(s) 766, 1036, 1682, 1729
CaiI CAGNNNCTG 1 cut(s) 121
CfoI GCGC 1 cut(s) 1733
Cfr13I GGNCC 4 cut(s) 100, 109, 1011, 1429
Cfr42I CCGCGG 1 cut(s) 1435
Csp6I GTAC 5 cut(s) 124, 286, 677, 938, 1759
CviQI GTAC 5 cut(s) 124, 286, 677, 938, 1759
DpnI GATC 4 cut(s) 401, 742, 814, 1128
DpnII GATC 4 cut(s) 399, 740, 812, 1126
DraI TTTAAA 1 cut(s) 1186
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 686, 980, 1194
EarI CTCTTC 3 cut(s) 686, 980, 1194
Ecl136II GAGCTC 1 cut(s) 265
Eco130I CCWWGG 2 cut(s) 145, 1056
Eco24I GRGCYC 1 cut(s) 267
Eco31I GGTCTC 1 cut(s) 144
Eco32I GATATC 1 cut(s) 1487
Eco47I GGWCC 2 cut(s) 109, 1011
Eco47III AGCGCT 1 cut(s) 1732
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 1 cut(s) 710
EcoICRI GAGCTC 1 cut(s) 265
EcoO109I RGGNCCY 2 cut(s) 100, 1011
EcoRI GAATTC 1 cut(s) 966
EcoRV GATATC 1 cut(s) 1487
EcoT14I CCWWGG 2 cut(s) 145, 1056
EcoT22I ATGCAT 2 cut(s) 294, 1804
EcoT38I GRGCYC 1 cut(s) 267
ErhI CCWWGG 2 cut(s) 145, 1056
FalI AAGNNNNNCTT 2 cut(s) 1241, 1273
FaqI GGGAC 1 cut(s) 1306
FauI CCCGC 3 cut(s) 120, 187, 1043
FblI GTMKAC 1 cut(s) 796
Fnu4HI GCNGC 7 cut(s) 415, 431, 470, 1330, 1432, 1481, 1734
FokI GGATG 1 cut(s) 295
FriOI GRGCYC 1 cut(s) 267
Fsp4HI GCNGC 7 cut(s) 415, 431, 470, 1330, 1432, 1481, 1734
FspBI CTAG 3 cut(s) 644, 1533, 1748
GlaI GCGC 1 cut(s) 1732
GluI GCNGC 7 cut(s) 415, 431, 470, 1330, 1432, 1481, 1734
GsaI CCCAGC 1 cut(s) 476
GsuI CTGGAG 1 cut(s) 1737
HaeII RGCGCY 1 cut(s) 1734
HaeIII GGCC 6 cut(s) 5, 101, 1055, 1431, 1680, 1727
HapII CCGG 3 cut(s) 839, 994, 1677
HhaI GCGC 1 cut(s) 1733
Hin6I GCGC 1 cut(s) 1731
HinP1I GCGC 1 cut(s) 1731
HincII GTYRAC 3 cut(s) 522, 1374, 1530
HindII GTYRAC 3 cut(s) 522, 1374, 1530
HindIII AAGCTT 2 cut(s) 1004, 1688
HinfI GANTC 7 cut(s) 118, 340, 388, 708, 1237, 1653, 1673
HpaI GTTAAC 2 cut(s) 522, 1374
HpaII CCGG 3 cut(s) 839, 994, 1677
HphI GGTGA 3 cut(s) 16, 1246, 1604
Hpy166II GTNNAC 6 cut(s) 522, 797, 1374, 1530, 1612, 1761
Hpy188I TCNGA 6 cut(s) 404, 654, 690, 1030, 1231, 1672
Hpy188III TCNNGA 8 cut(s) 395, 644, 744, 1354, 1490, 1520, 1754, 1833
Hpy8I GTNNAC 6 cut(s) 522, 797, 1374, 1530, 1612, 1761
Hpy99I CGWCG 1 cut(s) 993
HpyAV CCTTC 4 cut(s) 167, 301, 1351, 1543
HpyCH4III ACNGT 3 cut(s) 13, 142, 1297
HpyCH4IV ACGT 1 cut(s) 1170
HpyF10VI GCNNNNNNNGC 7 cut(s) 536, 914, 956, 1428, 1440, 1724, 1733
HpySE526I ACGT 1 cut(s) 1170
HspAI GCGC 1 cut(s) 1731
KspAI GTTAAC 2 cut(s) 522, 1374
KspI CCGCGG 1 cut(s) 1435
Kzo9I GATC 4 cut(s) 399, 740, 812, 1126
LmnI GCTCC 1 cut(s) 1756
Lsp1109I GCAGC 6 cut(s) 426, 442, 481, 1316, 1467, 1720
LweI GCATC 4 cut(s) 613, 917, 994, 1021
MaeI CTAG 3 cut(s) 644, 1533, 1748
MaeII ACGT 1 cut(s) 1170
MaeIII GTNAC 3 cut(s) 158, 350, 1253
MalI GATC 4 cut(s) 401, 742, 814, 1128
MboI GATC 4 cut(s) 399, 740, 812, 1126
MboII GAAGA 7 cut(s) 31, 123, 496, 703, 967, 1211, 1702
MfeI CAATTG 1 cut(s) 945
MflI RGATCY 2 cut(s) 740, 1126
MhlI GDGCHC 3 cut(s) 85, 267, 884
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 127, 334
MmeI TCCRAC 2 cut(s) 238, 537
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 294, 1804
MroXI GAANNNNTTC 1 cut(s) 1461
MscI TGGCCA 1 cut(s) 5
MseI TTAA 6 cut(s) 521, 758, 1151, 1185, 1308, 1373
MslI CAYNNNNRTG 1 cut(s) 60
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 472, 1434
MspI CCGG 3 cut(s) 839, 994, 1677
MspR9I CCNGG 1 cut(s) 839
MunI CAATTG 1 cut(s) 945
MvnI CGCG 1 cut(s) 1434
MwoI GCNNNNNNNGC 7 cut(s) 536, 914, 956, 1428, 1440, 1724, 1733
NciI CCSGG 1 cut(s) 839
NcoI CCATGG 1 cut(s) 145
NdeII GATC 4 cut(s) 399, 740, 812, 1126
NlaIV GGNNCC 4 cut(s) 111, 1012, 1128, 1430
NmuCI GTSAC 2 cut(s) 158, 350
NsiI ATGCAT 2 cut(s) 294, 1804
NspI RCATGY 3 cut(s) 59, 292, 1372
PciI ACATGT 1 cut(s) 1368
PdmI GAANNNNTTC 1 cut(s) 1461
PfeI GAWTC 5 cut(s) 388, 708, 1237, 1653, 1673
PfoI TCCNGGA 1 cut(s) 837
PkrI GCNGC 7 cut(s) 416, 432, 471, 1331, 1433, 1482, 1735
PleI GAGTC 2 cut(s) 126, 334
PpsI GAGTC 2 cut(s) 126, 334
PpuMI RGGWCCY 1 cut(s) 1011
PscI ACATGT 1 cut(s) 1368
PsiI TTATAA 1 cut(s) 297
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 1011
PspFI CCCAGC 1 cut(s) 472
PspN4I GGNNCC 4 cut(s) 111, 1012, 1128, 1430
PspPI GGNCC 4 cut(s) 100, 109, 1011, 1429
PspPPI RGGWCCY 1 cut(s) 1011
PstI CTGCAG 1 cut(s) 510
PstNI CAGNNNCTG 1 cut(s) 121
PsuI RGATCY 2 cut(s) 740, 1126
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 5 cut(s) 125, 287, 678, 939, 1760
RsaNI GTAC 5 cut(s) 124, 286, 677, 938, 1759
RseI CAYNNNNRTG 1 cut(s) 60
SacI GAGCTC 1 cut(s) 267
SacII CCGCGG 1 cut(s) 1435
SaqAI TTAA 6 cut(s) 521, 758, 1151, 1185, 1308, 1373
SatI GCNGC 7 cut(s) 415, 431, 470, 1330, 1432, 1481, 1734
Sau3AI GATC 4 cut(s) 399, 740, 812, 1126
Sau96I GGNCC 4 cut(s) 100, 109, 1011, 1429
SchI GAGTC 2 cut(s) 127, 334
ScrFI CCNGG 1 cut(s) 839
SduI GDGCHC 3 cut(s) 85, 267, 884
SfaNI GCATC 4 cut(s) 613, 917, 994, 1021
SfcI CTRYAG 2 cut(s) 506, 960
Sfr303I CCGCGG 1 cut(s) 1435
SgrBI CCGCGG 1 cut(s) 1435
SinI GGWCC 2 cut(s) 109, 1011
SmiMI CAYNNNNRTG 1 cut(s) 60
SmlI CTYRAG 4 cut(s) 266, 1106, 1423, 1721
SmoI CTYRAG 4 cut(s) 266, 1106, 1423, 1721
SsiI CCGC 7 cut(s) 53, 113, 194, 1036, 1346, 1432, 1434
SspI AATATT 1 cut(s) 1281
SspMI CTAG 3 cut(s) 644, 1533, 1748
SstI GAGCTC 1 cut(s) 267
StyD4I CCNGG 1 cut(s) 837
StyI CCWWGG 2 cut(s) 145, 1056
TaaI ACNGT 3 cut(s) 13, 142, 1297
TaiI ACGT 1 cut(s) 1173
TatI WGTACW 3 cut(s) 285, 937, 1758
TauI GCSGC 1 cut(s) 1434
TfiI GAWTC 5 cut(s) 388, 708, 1237, 1653, 1673
Tru1I TTAA 6 cut(s) 521, 758, 1151, 1185, 1308, 1373
Tru9I TTAA 6 cut(s) 521, 758, 1151, 1185, 1308, 1373
TscAI CASTG 1 cut(s) 355
TseFI GTSAC 2 cut(s) 158, 350
TseI GCWGC 6 cut(s) 414, 430, 469, 1329, 1480, 1733
Tsp45I GTSAC 2 cut(s) 158, 350
TspDTI ATGAA 6 cut(s) 123, 204, 626, 732, 1404, 1470
TspRI CASTG 1 cut(s) 355
VpaK11BI GGWCC 2 cut(s) 109, 1011
XapI RAATTY 6 cut(s) 966, 1147, 1187, 1393, 1457, 1824
XbaI TCTAGA 1 cut(s) 643
XceI RCATGY 3 cut(s) 59, 292, 1372
XcmI CCANNNNNNNNNTGG 1 cut(s) 1735
XmiI GTMKAC 1 cut(s) 796
XmnI GAANNNNTTC 1 cut(s) 1461
XspI CTAG 3 cut(s) 644, 1533, 1748
Zsp2I ATGCAT 2 cut(s) 294, 1804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.