tRNA-dihydrouridine20 synthase activity
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G281000_v2.0.a1 |
| pyrus_communis | pycom11g16490 |
| rosa_multiflora | Rmu_sc0001581.1_g000018 Rmu_sc0003413.1_g000009 Rmu_sc0004660.1_g000002 Rmu_sc0005999.1_g000003 Rmu_sc0007553.1_g000007 Rmu_ssc0000386.1_g000046 |
| rosa_roxburghii | Rroxscaffold_4G00308860 Rroxscaffold_4G00308870 Rroxscaffold_4G00326360 Rroxscaffold_5G00332780 Rroxscaffold_5G00332790 Rroxscaffold_6G00399230 |
| rosa_rugosa | Rorug05G0540600 |
| rosa_samantha | Rh3BG286100 Rh6AG109500 |
| rosa_wichuraiana | Rw2G021740 Rw6G011820 Rw7G032240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 5 cut(s) | 49, 105, 127, 176, 236 |
| AluBI | AGCT | 1 cut(s) | 244 |
| AluI | AGCT | 1 cut(s) | 244 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| BccI | CCATC | 1 cut(s) | 302 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BfaI | CTAG | 1 cut(s) | 245 |
| BglII | AGATCT | 2 cut(s) | 292, 331 |
| BsaJI | CCNNGG | 1 cut(s) | 22 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 22 |
| BseGI | GGATG | 1 cut(s) | 349 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsmBI | CGTCTC | 1 cut(s) | 129 |
| Bsp143I | GATC | 2 cut(s) | 292, 331 |
| BspQI | GCTCTTC | 1 cut(s) | 234 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BssECI | CCNNGG | 1 cut(s) | 22 |
| BssMI | GATC | 2 cut(s) | 292, 331 |
| Bst4CI | ACNGT | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 3 cut(s) | 92, 100, 234 |
| BstDSI | CCRYGG | 1 cut(s) | 22 |
| BstF5I | GGATG | 1 cut(s) | 349 |
| BstKTI | GATC | 2 cut(s) | 295, 334 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 2 cut(s) | 292, 331 |
| BstNSI | RCATGY | 1 cut(s) | 63 |
| BstX2I | RGATCY | 2 cut(s) | 292, 331 |
| BstYI | RGATCY | 2 cut(s) | 292, 331 |
| BtgI | CCRYGG | 1 cut(s) | 22 |
| BtsCI | GGATG | 1 cut(s) | 349 |
| CviAII | CATG | 1 cut(s) | 60 |
| CviJI | RGCY | 1 cut(s) | 244 |
| CviKI_1 | RGCY | 1 cut(s) | 244 |
| DpnI | GATC | 2 cut(s) | 294, 333 |
| DpnII | GATC | 2 cut(s) | 292, 331 |
| Eam1104I | CTCTTC | 3 cut(s) | 92, 100, 234 |
| EarI | CTCTTC | 3 cut(s) | 92, 100, 234 |
| Esp3I | CGTCTC | 1 cut(s) | 129 |
| FaeI | CATG | 1 cut(s) | 63 |
| FaiI | YATR | 2 cut(s) | 61, 287 |
| FatI | CATG | 1 cut(s) | 59 |
| FokI | GGATG | 1 cut(s) | 356 |
| FspBI | CTAG | 1 cut(s) | 245 |
| Hin1II | CATG | 1 cut(s) | 63 |
| HphI | GGTGA | 1 cut(s) | 38 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| HpyAV | CCTTC | 1 cut(s) | 218 |
| HpyCH4III | ACNGT | 1 cut(s) | 26 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Hsp92II | CATG | 1 cut(s) | 63 |
| Kzo9I | GATC | 2 cut(s) | 292, 331 |
| LguI | GCTCTTC | 1 cut(s) | 234 |
| LpnPI | CCDG | 2 cut(s) | 176, 250 |
| MaeI | CTAG | 1 cut(s) | 245 |
| MaeIII | GTNAC | 2 cut(s) | 26, 260 |
| MalI | GATC | 2 cut(s) | 294, 333 |
| MboI | GATC | 2 cut(s) | 292, 331 |
| MfeI | CAATTG | 1 cut(s) | 122 |
| MflI | RGATCY | 2 cut(s) | 292, 331 |
| MluCI | AATT | 4 cut(s) | 31, 105, 122, 195 |
| MnlI | CCTC | 4 cut(s) | 124, 148, 209, 307 |
| MunI | CAATTG | 1 cut(s) | 122 |
| NdeII | GATC | 2 cut(s) | 292, 331 |
| NlaIII | CATG | 1 cut(s) | 63 |
| NmuCI | GTSAC | 1 cut(s) | 26 |
| NspI | RCATGY | 1 cut(s) | 63 |
| PciSI | GCTCTTC | 1 cut(s) | 234 |
| PsuI | RGATCY | 2 cut(s) | 292, 331 |
| SapI | GCTCTTC | 1 cut(s) | 234 |
| Sau3AI | GATC | 2 cut(s) | 292, 331 |
| SetI | ASST | 3 cut(s) | 47, 195, 246 |
| Sse9I | AATT | 4 cut(s) | 31, 105, 122, 195 |
| SspMI | CTAG | 1 cut(s) | 245 |
| TaaI | ACNGT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TasI | AATT | 4 cut(s) | 31, 105, 122, 195 |
| TseFI | GTSAC | 1 cut(s) | 26 |
| Tsp45I | GTSAC | 1 cut(s) | 26 |
| TspDTI | ATGAA | 6 cut(s) | 66, 159, 177, 183, 201, 237 |
| TspGWI | ACGGA | 1 cut(s) | 316 |
| XceI | RCATGY | 1 cut(s) | 63 |
| XspI | CTAG | 1 cut(s) | 245 |