Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0011606

Physical Location & Seq

Genomic Coordinates Reverse (-)

28467813 .. 28470593

Gene Structure 2781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG286100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2781 bp

ATGGTTCATGGGAGCGGGGGCATGAAGGAAACCAGAGAAGGAATAGAGAGTCTGAAGCTTAAGCCCAGTGCATTTAGAGTGGAATCCAAAAGTTTTTTCATTGACATTGACAAGAAATCTCAGGGAGAAACGATCATCATCACTGAAAGAAGCAGATCAAAATGCTTTCAGATTGGATTTGGATTGGGTTGTGCGGTTTGGCTCATAGATCAGCTAAGAAAGGCAGGTTTTACAGGGGAACAAAATATCTGCAGGGTGTTCAGAGGTAATAACTATACTTTCTGGGTGGAGAACTACAGAAACAAAAATGGATCCTTCATGAAACTTTCTCGATGTGGAAGATACGAAGCTGTCCATTCCATCATTTTACCGAAAGGAGAAGGAAATGAAGGCTGGCAACAGATGGAGGAGAACCTAAACACTTTCATGTTTGGGAATAGCAAGGAGGAAGTGAAGCAAGTGAAGCAGGTCCAAGAGAAAACGATGGCTCAAAAACAGAGGGAGAGGTCTCCAGAAAACCAGCTGGAAAGCAATCGTAACTTCATGAAACAAGGAGGTACTACGACGCAGAAGATGGCGGATACCAAAAAATCTTGGGCTTGCACAGTGATTTGTCAAAGGAAGGCTGTTTTTCAATCTTGGAAGAACATTGAAAGAGGCTTATCAAAGTGGCTGGGCAAAGAGATAGAGCTTTATCCTTATCAAAACAACAGAGCTTTCTTCGTCTGCGAAAACTGTGAGGAGGCAGAACAGATTGCTAGTCATGGAAAACTCCCATTGTTGGGGCAACCAGAGGTCCTTCTTTTTGAATGGGCACAAGGATTGACAAACAATCTGAAGAAGGTGGTGAGCTACGGAGGATGGATAGCAGTGAAGGGACTCCCACTTCATTGGTGGTCACAGAAATATTTTAAGCAGATCGGTGATACTTGTGGTGGATTGCTTGAAGTGGATAACAGGACAGAAGGCTTCAAACATCTGTTCGAAGCTCGGATCAGAGTAAGACAGAACGAGACTGGTTTCCTGCCTGAACTAATAAAGCTGACAGAAGGTAATCAATCCCACATTGTACGTATACAGTCAGTTTCGAAGACTAGACAACCTGCAAAGGCAAGAGGAAAGGAACTACGATTTCACTTCCTCTGTAAGAAGTTGACCGAGGATGCTGGGGATTCTATCGGAAAACATAAGGACAGCCGGAATTTTTCAACGGCAACCTCCAGGCCGCCGGAAGATGTTTTGTCAAAAAGTACGTTGGAAGCTGCAAAAAGACCTGGGGAGAATAAGGAGCTGTCAGTGGAAGTGGAGAGGACACAAACTGTGATCAATACTCAATTGATCATGCCTGGTACTTTAATTGATAGTGGAGCTCAAGTGGAGAGGGCAGAAACTGAGAACAACACTATATTGAGCATGCCGGATACTTTAATTGATGGTGGAAAACAAGTGGAGGAGGCAGAAACAGAGATCAATACTATATTGGGCATGCCTGCTACTTTTACTGGTGGTGCTCAATTAAGAATTGGGCAAGTTGTCCTAACACCTTTATTGGACAACTTAAACCTTAAAACAATGCATCAAGTGGTTCCAAGCTTCAAGAACGACCCACTTCAGTCTGGAGGTTTACAGGCCCATGTAGTCTTCAAGAAGGCCCCATTTCAGTCCGGAGCTTCGGGGGCCCAAGCAGGCTTCATGCAGGCTACGCTTGAGTCTGGAGGTTTAGAGGCCCAGAAGAAAACTAAAGCAGTGACCTGCAAACAGGGAATATTTTCTGGAAAGAGAGGAACTCAGAATAGACATAGTAAAGAAAGGGGAAAGCAAGGAATGCCTGAAGTTTTGGACGGACCTCCAAGATTGGAAACCAATTTTCCTCCCATTTCTGGAAAAGTTTCAAGAAACTTATTTAAGGCACTGAAGCCTGAAGATTTTGGAGGCAGAAGATATATGCAGGTTCAACAATCCATGGGAGATAAGAAAGTAACTAGTAACTCAGTGATAAGAGGGGATGATGAAGATAAAGATGAAGTAGAAGATGAAGAGGAAGAAGAAGATGAAGGAGAAGCTGAAGACAAAGTGGAACAACAAGGGGATCAAGAATTTCATGGAAAGGAGAACGGATGCAACGGAGGATTTGTGGAAAACAGAGAGAAGCAAGGTAGTAACTGGAAATCATGTCATGAAGATTTAGAAGATCCTATTGAAACAGATGGGGAGGAAAACCTGTATGCAGATATTGATAGGGAGGATCTGGTCAGGTCAGATAGCTCATATGACCAGTGCAGTGATACAGAATTCTCCTCTGTTGAAGGAAGACAAGATGCTGATCCATTGGAGGATGAGGAATTCAATTTAGAAGGCTTTATGGAAGGACGAACAATTAGTAACTCCTTAGTAGCAGTTCATGATGATGGAGGAAAAGGGGGGAGGGATGGGAGGAATGTTCTGCTTGTAGAGAAAATAAAAAAGGATGGAGCAATTGCATTGGGAAAAGATGGACAGATTAATCAAGTAAGGACACATGCTCAATCATTGACCAAGCAACCTCAGAGAAGAGAGGGGACAAATTCAACTAACGACAGCTCATATCAGACTCAAAGGAAGGTCTCAGGCATGCAAAAAATGGGGAAAATTGGGAAGTTCCTAGCGCCTATGAAGCTGCAAGTGTATGCTAGGAAAAAACAAAAGAGCAAGAACAGCCTTGATATAAAAACCAAGAAGGACTGGAAGAACGTGCAGCTAAAGGCCAATGTGGAGATGGGGGAATCCAAGAATTTTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

926

Amino Acids

103.97

Weight (kDa)

7.79

Isoelectric Point (pI)

41.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011606)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G281000_v2.0.a1
pyrus_communis	pycom11g16490
rosa_multiflora	Rmu_sc0001581.1_g000018 Rmu_sc0003413.1_g000009 Rmu_sc0004660.1_g000002 Rmu_sc0005999.1_g000003 Rmu_sc0007553.1_g000007 Rmu_ssc0000386.1_g000046
rosa_roxburghii	Rroxscaffold_4G00308860 Rroxscaffold_4G00308870 Rroxscaffold_4G00326360 Rroxscaffold_5G00332780 Rroxscaffold_5G00332790 Rroxscaffold_6G00399230
rosa_rugosa	Rorug05G0540600
rosa_samantha	Rh3BG286100 Rh6AG109500
rosa_wichuraiana	Rw2G021740 Rw6G011820 Rw7G032240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	5 cut(s)	215, 457, 1111, 1760, 1939
AccBSI	CCGCTC	1 cut(s)	15
AccI	GTMKAC	1 cut(s)	1075
AccIII	TCCGGA	1 cut(s)	1664
AciI	CCGC	4 cut(s)	15, 194, 578, 1226
AclWI	GGATC	7 cut(s)	306, 319, 1001, 2097, 2186, 2253, 2318
AcsI	RAATTY	6 cut(s)	1201, 2096, 2291, 2342, 2563, 2770
AcuI	CTGAAG	7 cut(s)	74, 857, 1595, 1851, 1934, 1941, 2085
AfaI	GTAC	4 cut(s)	559, 1071, 1252, 1351
AfiI	CCNNNNNNNGG	3 cut(s)	781, 782, 1880
AflII	CTTAAG	1 cut(s)	59
AhlI	ACTAGT	1 cut(s)	1982
AjnI	CCWGG	3 cut(s)	1220, 1273, 1345
AjuI	GAANNNNNNNTTGG	2 cut(s)	80, 112
Alw21I	GWGCWC	2 cut(s)	1372, 1513
Alw26I	GTCTC	3 cut(s)	513, 1007, 2608
AlwI	GGATC	7 cut(s)	306, 319, 1001, 2097, 2186, 2253, 2318
AlwNI	CAGNNNCTG	1 cut(s)	1391
Aor13HI	TCCGGA	1 cut(s)	1664
AoxI	GGCC	6 cut(s)	1223, 1629, 1650, 1677, 1725, 2742
ApaI	GGGCCC	1 cut(s)	1681
ApeKI	GCWGC	3 cut(s)	1262, 2656, 2734
ApoI	RAATTY	6 cut(s)	1201, 2096, 2291, 2342, 2563, 2770
AseI	ATTAAT	1 cut(s)	2502
Asp700I	GAANNNNTTC	2 cut(s)	1768, 1888
AspLEI	GCGC	1 cut(s)	2647
AspS9I	GGNCC	8 cut(s)	469, 796, 1630, 1651, 1677, 1678, 1726, 1844
AsuHPI	GGTGA	2 cut(s)	859, 935
AsuII	TTCGAA	2 cut(s)	984, 1088
AvaII	GGWCC	3 cut(s)	469, 796, 1844
BaeGI	GKGCMC	2 cut(s)	817, 1681
BamHI	GGATCC	1 cut(s)	311
BanII	GRGCYC	2 cut(s)	1372, 1681
BbsI	GAAGAC	4 cut(s)	1097, 1633, 2073, 2317
Bbv12I	GWGCWC	2 cut(s)	1372, 1513
BbvI	GCAGC	3 cut(s)	1249, 2643, 2746
BceAI	ACGGC	1 cut(s)	1227
BciT130I	CCWGG	3 cut(s)	1222, 1275, 1347
BciVI	GTATCC	2 cut(s)	574, 1414
BclI	TGATCA	2 cut(s)	1323, 1338
BcoDI	GTCTC	3 cut(s)	513, 1007, 2608
BcuI	ACTAGT	1 cut(s)	1982
BfaI	CTAG	5 cut(s)	759, 1095, 1983, 2642, 2670
BfmI	CTRYAG	2 cut(s)	250, 295
BfoI	RGCGCY	1 cut(s)	2648
BfrI	CTTAAG	1 cut(s)	59
BfuAI	ACCTGC	5 cut(s)	215, 457, 1111, 1760, 1939
BfuI	GTATCC	2 cut(s)	574, 1414
BisI	GCNGC	4 cut(s)	1226, 1263, 2657, 2735
BlsI	GCNGC	4 cut(s)	1227, 1264, 2658, 2736
Bme1390I	CCNGG	3 cut(s)	1222, 1275, 1347
Bme18I	GGWCC	3 cut(s)	469, 796, 1844
BmgT120I	GGNCC	8 cut(s)	469, 796, 1630, 1651, 1677, 1678, 1726, 1844
BmiI	GGNNCC	5 cut(s)	313, 1587, 1653, 1678, 1679
BmrFI	CCNGG	3 cut(s)	1222, 1275, 1347
BmrI	ACTGGG	1 cut(s)	60
BmsI	GCATC	4 cut(s)	1153, 1585, 2108, 2308
BmuI	ACTGGG	1 cut(s)	60
BpiI	GAAGAC	4 cut(s)	1097, 1633, 2073, 2317
BplI	GAGNNNNNCTC	2 cut(s)	1771, 1803
BpmI	CTGGAG	4 cut(s)	495, 1204, 1638, 1734
Bpu14I	TTCGAA	2 cut(s)	984, 1088
BpuEI	CTTGAG	2 cut(s)	1356, 1727
BsaAI	YACGTR	1 cut(s)	1073
BsaBI	GATNNNNATC	2 cut(s)	137, 2322
BsaI	GGTCTC	2 cut(s)	513, 2608
BsaJI	CCNNGG	3 cut(s)	1158, 1274, 1962
BsaWI	WCCGGW	1 cut(s)	1664
BsaXI	ACNNNNNCTCC	4 cut(s)	1359, 1389, 2118, 2148
Bsc4I	CCNNNNNNNGG	3 cut(s)	781, 782, 1880
Bse1I	ACTGG	6 cut(s)	66, 1021, 1507, 2168, 2275, 2726
Bse8I	GATNNNNATC	2 cut(s)	137, 2322
BseAI	TCCGGA	1 cut(s)	1664
BseBI	CCWGG	3 cut(s)	1222, 1275, 1347
BseDI	CCNNGG	3 cut(s)	1158, 1274, 1962
BseGI	GGATG	7 cut(s)	866, 1168, 2011, 2123, 2341, 2434, 2473
BseJI	GATNNNNATC	2 cut(s)	137, 2322
BseLI	CCNNNNNNNGG	3 cut(s)	781, 782, 1880
BseMII	CTCAG	6 cut(s)	134, 1383, 1802, 2004, 2558, 2619
BseNI	ACTGG	6 cut(s)	66, 1021, 1507, 2168, 2275, 2726
BseRI	GAGGAG	4 cut(s)	422, 755, 1466, 2287
BseSI	GKGCMC	2 cut(s)	817, 1681
BseXI	GCAGC	3 cut(s)	1249, 2643, 2746
BseYI	CCCAGC	2 cut(s)	673, 1166
BsgI	GTGCAG	2 cut(s)	2299, 2753
BshFI	GGCC	6 cut(s)	1225, 1631, 1652, 1679, 1727, 2744
BsiHKAI	GWGCWC	2 cut(s)	1372, 1513
BsiSI	CCGG	4 cut(s)	1198, 1229, 1418, 1665
BslFI	GGGAC	2 cut(s)	891, 2572
BslI	CCNNNNNNNGG	3 cut(s)	781, 782, 1880
BsmAI	GTCTC	3 cut(s)	513, 1007, 2608
BsmFI	GGGAC	2 cut(s)	891, 2572
BsmI	GAATGC	1 cut(s)	1830
BsnI	GGCC	6 cut(s)	1225, 1631, 1652, 1679, 1727, 2744
Bso31I	GGTCTC	2 cut(s)	513, 2608
Bsp119I	TTCGAA	2 cut(s)	984, 1088
Bsp120I	GGGCCC	1 cut(s)	1677
Bsp1286I	GDGCHC	4 cut(s)	817, 1372, 1513, 1681
Bsp13I	TCCGGA	1 cut(s)	1664
Bsp19I	CCATGG	1 cut(s)	1962
BspACI	CCGC	4 cut(s)	15, 194, 578, 1226
BspANI	GGCC	6 cut(s)	1225, 1631, 1652, 1679, 1727, 2744
BspCNI	CTCAG	6 cut(s)	133, 1384, 1801, 2003, 2557, 2618
BspEI	TCCGGA	1 cut(s)	1664
BspHI	TCATGA	4 cut(s)	318, 543, 2176, 2401
BspLI	GGNNCC	5 cut(s)	313, 1587, 1653, 1678, 1679
BspMAI	CTGCAG	1 cut(s)	254
BspMI	ACCTGC	5 cut(s)	215, 457, 1111, 1760, 1939
BspPI	GGATC	7 cut(s)	306, 319, 1001, 2097, 2186, 2253, 2318
BspT104I	TTCGAA	2 cut(s)	984, 1088
BspTI	CTTAAG	1 cut(s)	59
BspTNI	GGTCTC	2 cut(s)	513, 2608
BsrBI	CCGCTC	1 cut(s)	15
BsrI	ACTGG	6 cut(s)	66, 1021, 1507, 2168, 2275, 2726
BssECI	CCNNGG	3 cut(s)	1158, 1274, 1962
BssNAI	GTATAC	1 cut(s)	1076
BssT1I	CCWWGG	1 cut(s)	1962
Bst1107I	GTATAC	1 cut(s)	1076
Bst2UI	CCWGG	3 cut(s)	1222, 1275, 1347
Bst4CI	ACNGT	4 cut(s)	607, 737, 1080, 1321
Bst6I	CTCTTC	2 cut(s)	2031, 2545
BstAFI	CTTAAG	1 cut(s)	59
BstAPI	GCANNNNNTGC	1 cut(s)	1825
BstBAI	YACGTR	1 cut(s)	1073
BstBI	TTCGAA	2 cut(s)	984, 1088
BstC8I	GCNNGC	8 cut(s)	395, 601, 1415, 1487, 1491, 1687, 1698, 2612
BstDEI	CTNAG	8 cut(s)	120, 215, 1392, 1788, 1990, 2389, 2544, 2605
BstDSI	CCRYGG	1 cut(s)	1962
BstF5I	GGATG	7 cut(s)	866, 1168, 2011, 2123, 2341, 2434, 2473
BstH2I	RGCGCY	1 cut(s)	2648
BstHHI	GCGC	1 cut(s)	2647
BstMAI	GTCTC	3 cut(s)	513, 1007, 2608
BstMWI	GCNNNNNNNGC	6 cut(s)	463, 1676, 1702, 1825, 2653, 2694
BstNI	CCWGG	3 cut(s)	1222, 1275, 1347
BstNSI	RCATGY	4 cut(s)	1417, 1489, 2522, 2614
BstSCI	CCNGG	3 cut(s)	1220, 1273, 1345
BstSFI	CTRYAG	2 cut(s)	250, 295
BstSLI	GKGCMC	2 cut(s)	817, 1681
BstSNI	TACGTA	1 cut(s)	1073
BstV1I	GCAGC	3 cut(s)	1249, 2643, 2746
BstV2I	GAAGAC	4 cut(s)	1097, 1633, 2073, 2317
BstX2I	RGATCY	3 cut(s)	311, 2191, 2245
BstXI	CCANNNNNNTGG	1 cut(s)	891
BstYI	RGATCY	3 cut(s)	311, 2191, 2245
BstZ17I	GTATAC	1 cut(s)	1076
BsuI	GTATCC	2 cut(s)	574, 1414
BsuRI	GGCC	6 cut(s)	1225, 1631, 1652, 1679, 1727, 2744
BtgI	CCRYGG	1 cut(s)	1962
BtsCI	GGATG	7 cut(s)	866, 1168, 2011, 2123, 2341, 2434, 2473
BtsI	GCAGTG	3 cut(s)	876, 1752, 2287
BveI	ACCTGC	5 cut(s)	215, 457, 1111, 1760, 1939
Cac8I	GCNNGC	8 cut(s)	395, 601, 1415, 1487, 1491, 1687, 1698, 2612
CaiI	CAGNNNCTG	1 cut(s)	1391
CciI	TCATGA	4 cut(s)	318, 543, 2176, 2401
CfoI	GCGC	1 cut(s)	2647
Cfr13I	GGNCC	8 cut(s)	469, 796, 1630, 1651, 1677, 1678, 1726, 1844
CseI	GACGC	1 cut(s)	574
Csp6I	GTAC	4 cut(s)	558, 1070, 1251, 1350
CviQI	GTAC	4 cut(s)	558, 1070, 1251, 1350
DdeI	CTNAG	8 cut(s)	120, 215, 1392, 1788, 1990, 2389, 2544, 2605
DraI	TTTAAA	1 cut(s)	2776
Eam1104I	CTCTTC	2 cut(s)	2031, 2545
EarI	CTCTTC	2 cut(s)	2031, 2545
EciI	GGCGGA	1 cut(s)	593
Ecl136II	GAGCTC	1 cut(s)	1370
Eco105I	TACGTA	1 cut(s)	1073
Eco130I	CCWWGG	1 cut(s)	1962
Eco24I	GRGCYC	2 cut(s)	1372, 1681
Eco31I	GGTCTC	2 cut(s)	513, 2608
Eco47I	GGWCC	3 cut(s)	469, 796, 1844
Eco53kI	GAGCTC	1 cut(s)	1370
Eco57I	CTGAAG	7 cut(s)	74, 857, 1595, 1851, 1934, 1941, 2085
EcoICRI	GAGCTC	1 cut(s)	1370
EcoO109I	RGGNCCY	3 cut(s)	796, 1651, 1677
EcoRI	GAATTC	2 cut(s)	2291, 2342
EcoRII	CCWGG	3 cut(s)	1220, 1273, 1345
EcoT14I	CCWWGG	1 cut(s)	1962
EcoT22I	ATGCAT	1 cut(s)	1578
EcoT38I	GRGCYC	2 cut(s)	1372, 1681
ErhI	CCWWGG	1 cut(s)	1962
FaqI	GGGAC	2 cut(s)	891, 2572
FauI	CCCGC	1 cut(s)	8
FauNDI	CATATG	1 cut(s)	2269
FbaI	TGATCA	2 cut(s)	1323, 1338
FblI	GTMKAC	1 cut(s)	1075
Fnu4HI	GCNGC	4 cut(s)	1226, 1263, 2657, 2735
FokI	GGATG	7 cut(s)	873, 1175, 2018, 2130, 2348, 2441, 2480
FriOI	GRGCYC	2 cut(s)	1372, 1681
Fsp4HI	GCNGC	4 cut(s)	1226, 1263, 2657, 2735
FspBI	CTAG	5 cut(s)	759, 1095, 1983, 2642, 2670
GlaI	GCGC	1 cut(s)	2646
GluI	GCNGC	4 cut(s)	1226, 1263, 2657, 2735
GsaI	CCCAGC	2 cut(s)	677, 1170
GsuI	CTGGAG	4 cut(s)	495, 1204, 1638, 1734
HaeII	RGCGCY	1 cut(s)	2648
HaeIII	GGCC	6 cut(s)	1225, 1631, 1652, 1679, 1727, 2744
HapII	CCGG	4 cut(s)	1198, 1229, 1418, 1665
HgaI	GACGC	1 cut(s)	574
HhaI	GCGC	1 cut(s)	2647
Hin6I	GCGC	1 cut(s)	2645
HinP1I	GCGC	1 cut(s)	2645
HincII	GTYRAC	1 cut(s)	1155
HindII	GTYRAC	1 cut(s)	1155
HindIII	AAGCTT	2 cut(s)	56, 1591
HinfI	GANTC	7 cut(s)	49, 83, 879, 1172, 1709, 2590, 2762
HpaII	CCGG	4 cut(s)	1198, 1229, 1418, 1665
HphI	GGTGA	2 cut(s)	859, 935
Hpy166II	GTNNAC	3 cut(s)	1076, 1155, 1625
Hpy8I	GTNNAC	3 cut(s)	1076, 1155, 1625
Hpy99I	CGWCG	1 cut(s)	568
HpyCH4III	ACNGT	4 cut(s)	607, 737, 1080, 1321
HpyCH4IV	ACGT	3 cut(s)	1072, 1253, 2730
HpyF10VI	GCNNNNNNNGC	6 cut(s)	463, 1676, 1702, 1825, 2653, 2694
HpyF3I	CTNAG	8 cut(s)	120, 215, 1392, 1788, 1990, 2389, 2544, 2605
HpySE526I	ACGT	3 cut(s)	1072, 1253, 2730
HspAI	GCGC	1 cut(s)	2645
Kpn2I	TCCGGA	1 cut(s)	1664
Ksp22I	TGATCA	2 cut(s)	1323, 1338
LmnI	GCTCC	5 cut(s)	12, 1288, 1367, 1667, 2471
Lsp1109I	GCAGC	3 cut(s)	1249, 2643, 2746
LweI	GCATC	4 cut(s)	1153, 1585, 2108, 2308
MaeI	CTAG	5 cut(s)	759, 1095, 1983, 2642, 2670
MaeII	ACGT	3 cut(s)	1072, 1253, 2730
MaeIII	GTNAC	7 cut(s)	536, 897, 1747, 1978, 1985, 2159, 2381
MbiI	CCGCTC	1 cut(s)	15
MfeI	CAATTG	2 cut(s)	1334, 2475
MflI	RGATCY	3 cut(s)	311, 2191, 2245
MhlI	GDGCHC	4 cut(s)	817, 1372, 1513, 1681
MlyI	GAGTC	4 cut(s)	58, 873, 1718, 2584
MmeI	TCCRAC	1 cut(s)	1236
Mph1103I	ATGCAT	1 cut(s)	1578
MroI	TCCGGA	1 cut(s)	1664
MroXI	GAANNNNTTC	2 cut(s)	1768, 1888
MslI	CAYNNNNRTG	2 cut(s)	425, 2406
MspA1I	CMGCKG	1 cut(s)	523
MspCI	CTTAAG	1 cut(s)	59
MspI	CCGG	4 cut(s)	1198, 1229, 1418, 1665
MspR9I	CCNGG	3 cut(s)	1222, 1275, 1347
MunI	CAATTG	2 cut(s)	1334, 2475
Mva1269I	GAATGC	1 cut(s)	1830
MvaI	CCWGG	3 cut(s)	1222, 1275, 1347
MwoI	GCNNNNNNNGC	6 cut(s)	463, 1676, 1702, 1825, 2653, 2694
NcoI	CCATGG	1 cut(s)	1962
NdeI	CATATG	1 cut(s)	2269
NlaIV	GGNNCC	5 cut(s)	313, 1587, 1653, 1678, 1679
NmuCI	GTSAC	2 cut(s)	897, 1747
NsiI	ATGCAT	1 cut(s)	1578
NspI	RCATGY	4 cut(s)	1417, 1489, 2522, 2614
NspV	TTCGAA	2 cut(s)	984, 1088
PaeI	GCATGC	3 cut(s)	1417, 1489, 2614
PagI	TCATGA	4 cut(s)	318, 543, 2176, 2401
PctI	GAATGC	1 cut(s)	1830
PdmI	GAANNNNTTC	2 cut(s)	1768, 1888
PfeI	GAWTC	3 cut(s)	83, 1172, 2762
PkrI	GCNGC	4 cut(s)	1227, 1264, 2658, 2736
PleI	GAGTC	4 cut(s)	57, 873, 1717, 2584
PpsI	GAGTC	4 cut(s)	57, 873, 1717, 2584
Ppu21I	YACGTR	1 cut(s)	1073
PpuMI	RGGWCCY	1 cut(s)	796
PshBI	ATTAAT	1 cut(s)	2502
Psp124BI	GAGCTC	1 cut(s)	1372
Psp5II	RGGWCCY	1 cut(s)	796
Psp6I	CCWGG	3 cut(s)	1220, 1273, 1345
PspFI	CCCAGC	2 cut(s)	673, 1166
PspGI	CCWGG	3 cut(s)	1220, 1273, 1345
PspN4I	GGNNCC	5 cut(s)	313, 1587, 1653, 1678, 1679
PspOMI	GGGCCC	1 cut(s)	1677
PspPI	GGNCC	8 cut(s)	469, 796, 1630, 1651, 1677, 1678, 1726, 1844
PspPPI	RGGWCCY	1 cut(s)	796
PstI	CTGCAG	1 cut(s)	254
PstNI	CAGNNNCTG	1 cut(s)	1391
PsuI	RGATCY	3 cut(s)	311, 2191, 2245
PvuII	CAGCTG	1 cut(s)	523
RsaI	GTAC	4 cut(s)	559, 1071, 1252, 1351
RsaNI	GTAC	4 cut(s)	558, 1070, 1251, 1350
RseI	CAYNNNNRTG	2 cut(s)	425, 2406
SacI	GAGCTC	1 cut(s)	1372
SatI	GCNGC	4 cut(s)	1226, 1263, 2657, 2735
Sau96I	GGNCC	8 cut(s)	469, 796, 1630, 1651, 1677, 1678, 1726, 1844
SchI	GAGTC	4 cut(s)	58, 873, 1718, 2584
ScrFI	CCNGG	3 cut(s)	1222, 1275, 1347
SduI	GDGCHC	4 cut(s)	817, 1372, 1513, 1681
SfaNI	GCATC	4 cut(s)	1153, 1585, 2108, 2308
SfcI	CTRYAG	2 cut(s)	250, 295
SfuI	TTCGAA	2 cut(s)	984, 1088
SinI	GGWCC	3 cut(s)	469, 796, 1844
SmiMI	CAYNNNNRTG	2 cut(s)	425, 2406
SmlI	CTYRAG	3 cut(s)	59, 1371, 1706
SmoI	CTYRAG	3 cut(s)	59, 1371, 1706
SnaBI	TACGTA	1 cut(s)	1073
SpeI	ACTAGT	1 cut(s)	1982
SphI	GCATGC	3 cut(s)	1417, 1489, 2614
SsiI	CCGC	4 cut(s)	15, 194, 578, 1226
SspI	AATATT	2 cut(s)	908, 1767
SspMI	CTAG	5 cut(s)	759, 1095, 1983, 2642, 2670
SstI	GAGCTC	1 cut(s)	1372
StyD4I	CCNGG	3 cut(s)	1220, 1273, 1345
StyI	CCWWGG	1 cut(s)	1962
TaaI	ACNGT	4 cut(s)	607, 737, 1080, 1321
TaiI	ACGT	3 cut(s)	1075, 1256, 2733
TaqI	TCGA	3 cut(s)	331, 984, 1088
TaqII	GACCGA	1 cut(s)	1172
TauI	GCSGC	1 cut(s)	1228
TfiI	GAWTC	3 cut(s)	83, 1172, 2762
TseFI	GTSAC	2 cut(s)	897, 1747
TseI	GCWGC	3 cut(s)	1262, 2656, 2734
Tsp45I	GTSAC	2 cut(s)	897, 1747
TspGWI	ACGGA	4 cut(s)	870, 1857, 2130, 2139
Vha464I	CTTAAG	1 cut(s)	59
VpaK11BI	GGWCC	3 cut(s)	469, 796, 1844
VspI	ATTAAT	1 cut(s)	2502
XapI	RAATTY	6 cut(s)	1201, 2096, 2291, 2342, 2563, 2770
XceI	RCATGY	4 cut(s)	1417, 1489, 2522, 2614
XcmI	CCANNNNNNNNNTGG	2 cut(s)	891, 2752
XmiI	GTMKAC	1 cut(s)	1075
XmnI	GAANNNNTTC	2 cut(s)	1768, 1888
XspI	CTAG	5 cut(s)	759, 1095, 1983, 2642, 2670
Zsp2I	ATGCAT	1 cut(s)	1578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.