Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009491

Physical Location & Seq

Genomic Coordinates Forward (+)

65401850 .. 65408510

Gene Structure 6661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00331440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGCCAAAAGGGTTCTCTGCAAGTTCTTTGCCCATGGAGCCTGTTTAAAAGGGGAGCACTGCGAGTTTTCACATGATTGGAAGGATCCATCAAATAATATATGTACCTTTTATCAGAAAGGAGCTTGTGCCTTTGGTAGTCGATGCAGATATGAACATGTTAAAGCTTCTCGGGCTCAGTCATCTGGTTCGTCTTCATCAGCAAATTCTCATCAATCTCTGGCTTTTGATTCTGCTCTTGCTCATCCCTCAAGAACTGCATCAAGTGGAGTTGCTTTAGTCCCGGGCACTCTTTCTGAGCTCTCTGCATTTAGTAGTCCTTTCTTACCTCCCCCTAAACCTGCATGGAGTGATTCTCTGGATGATGGTGATTTTGATCACAATGAGGATGATGATGTGGGGGAGACTAGAAGTGCTAGACCAGCCGATCGTGCTATCTGTTCATTTGCTGCAGCTGGTAATTGTCCTCGTGGAGAAAAGTGTCCTCATATTCATGGAGATATTTGCCCCAGTTGTGGAAAACATTGTTTGCATCCTTACAGACCTGTGGAAAGAGAGGAGCATATGAAGACGTGCGAGGAAAAGCACAAGCAACTTGAGGCATTAAAGCGTAGTCAAGAAATAGAATGCAGTGTTTGCCTGGAACGTGTTCTTTCAAAGCCTACAGTTGCTGAACGAAAGTTTGGGATACTCTCAGAATGTGATCACCCTTTTTGCATATCTTGTATTCGAAACTGGCGCAGTAGCTCCCCAACTTCTGGTATGGATGTGAATAGTGCATTGAGAGCTTGCCCAATATGTCGGAAGCTGTCATACTTTGTGATTCCAAGTGTCATATGGTATAACACAAAAGAAGAGAAAGAGGAAATTGTTGACAGCTACAAGGCTCGCCTCAGGTTGATTGATTGCAAGCACTTTGATTTTGGAAATGGGAACTGCCCATTTGGGACAAGCTGTTTTTATAAGGTAATTTTGCTCTTCTGGAAATATGCTACTGCCATTGTCATTCATATTTGTTTGTTTTCTGTCGCATTGAGAGCCAGTTTCTGTGTCATGGCTCATGATGAGATTGACAAGTATGTGATGCATACGGTCAAGCCGGGCTCCTATGTATGGAAATTTCATAGGCCACCTCCAAGAAGGCCACCTCCGCGCCGATCTGATACAGTGCGAATGGATGCCCTTTATGAGATGTTCGAGCACTTGGAAGAATTGGAGGATTATACTCCTGGTGATTTGGATATCCCTTTGGAACATGCATACCGGGATGGCCGTCTAGAGGAAGTTGTGCTGCGTCACCTGGGAAATGAAGATGGTCAGACGGTGATAGCTGCAAATATTAGGTTTTACTCTGACTTGAGTACTTCGTATTGGTGTAGAAGAAAATCAAACTGGACTAACAAGTCTCTAAGCCGCAGTCTCTGTGCCCATTCTTCTCTTAAGCCAGTGTTGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-CCCH zf-RING_2

Protein Analysis

485

Amino Acids

54.76

Weight (kDa)

7.72

Isoelectric Point (pI)

60.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_3	PF15663	6 - 61	2.7e-06	Zinc-finger containing family
zf-CCCH_4	PF18044	34 - 53	1.4e-06	CCCH-type zinc finger
zf-RING_2	PF13639	209 - 268	2.2e-06	Ring finger domain
zf-C3HC4	PF00097	210 - 267	3.4e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08505 AT3G08505 AT3G08505
fragaria_vesca	FvH4_7g00890 FvH4_7g00890 FvH4_7g00890
malus_domestica	MD02G1313900.v1.1 MD07G1008500.v1.1
prunus_persica	Prupe.2G011700_v2.0.a1 Prupe.2G011700_v2.0.a1
pyrus_communis	pycom02g26320 pycom07g00730
rosa_chinensis	RchiOBHm_Chr1g0315781
rosa_laevigata	RLG00000030733
rosa_multiflora	Rmu_sc0009816.1_g000006
rosa_roxburghii	Rroxscaffold_4G00331440
rosa_rugosa	Rorug01G0005500
rosa_samantha	Rh1AG016400 Rh1BG008800 Rh1CG013700 Rh1DG009500
rosa_wichuraiana	Rw1G000960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	963
AasI	GACNNNNNNGTC	1 cut(s)	1402
Acc36I	ACCTGC	1 cut(s)	349
AccB7I	CCANNNNNTGG	1 cut(s)	758
AccII	CGCG	1 cut(s)	1153
AciI	CCGC	2 cut(s)	1151, 1414
AclWI	GGATC	2 cut(s)	80, 93
AcoI	YGGCCR	2 cut(s)	3, 1270
AcsI	RAATTY	2 cut(s)	205, 1118
AfaI	GTAC	2 cut(s)	106, 1363
AfiI	CCNNNNNNNGG	4 cut(s)	515, 758, 1113, 1279
AflII	CTTAAG	1 cut(s)	1439
AflIII	ACRYGT	2 cut(s)	157, 646
AgsI	TTSAA	1 cut(s)	657
AjiI	CACGTC	1 cut(s)	573
AjnI	CCWGG	3 cut(s)	639, 1228, 1299
AjuI	GAANNNNNNNTTGG	2 cut(s)	666, 698
Alw21I	GWGCWC	3 cut(s)	60, 303, 1203
Alw26I	GTCTC	3 cut(s)	398, 1410, 1424
AlwI	GGATC	2 cut(s)	80, 93
AlwNI	CAGNNNCTG	3 cut(s)	671, 1047, 1422
Ama87I	CYCGRG	2 cut(s)	171, 283
AoxI	GGCC	4 cut(s)	3, 1127, 1142, 1270
ApeKI	GCWGC	4 cut(s)	449, 452, 1291, 1331
ApoI	RAATTY	2 cut(s)	205, 1118
Asp700I	GAANNNNTTC	1 cut(s)	648
AspLEI	GCGC	2 cut(s)	741, 1155
AsuC2I	CCSGG	4 cut(s)	284, 285, 1101, 1265
AsuHPI	GGTGA	5 cut(s)	380, 698, 1244, 1289, 1336
AsuII	TTCGAA	1 cut(s)	730
AvaI	CYCGRG	2 cut(s)	171, 283
AxyI	CCTNAGG	1 cut(s)	893
BaeGI	GKGCMC	2 cut(s)	290, 1429
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	85
BanII	GRGCYC	3 cut(s)	178, 303, 1106
BarI	GAAGNNNNNNTAC	2 cut(s)	797, 829
BauI	CACGAG	1 cut(s)	468
BbsI	GAAGAC	2 cut(s)	186, 575
Bbv12I	GWGCWC	3 cut(s)	60, 303, 1203
BbvI	GCAGC	4 cut(s)	436, 464, 1278, 1318
BccI	CCATC	4 cut(s)	97, 359, 1262, 1307
BceAI	ACGGC	1 cut(s)	1257
BciT130I	CCWGG	3 cut(s)	641, 1230, 1301
BciVI	GTATCC	1 cut(s)	681
BclI	TGATCA	2 cut(s)	376, 703
BcnI	CCSGG	4 cut(s)	284, 285, 1101, 1265
BcoDI	GTCTC	3 cut(s)	398, 1410, 1424
BfaI	CTAG	3 cut(s)	408, 417, 1277
BfmI	CTRYAG	2 cut(s)	450, 663
BfrI	CTTAAG	1 cut(s)	1439
BfuAI	ACCTGC	1 cut(s)	349
BfuI	GTATCC	1 cut(s)	681
BisI	GCNGC	5 cut(s)	450, 453, 1292, 1332, 1414
BlsI	GCNGC	5 cut(s)	451, 454, 1293, 1333, 1415
BmcAI	AGTACT	1 cut(s)	1363
Bme1390I	CCNGG	7 cut(s)	284, 285, 641, 1101, 1230, 1265, 1301
BmeT110I	CYCGRG	2 cut(s)	171, 283
BmgBI	CACGTC	1 cut(s)	573
BmiI	GGNNCC	3 cut(s)	40, 87, 1105
BmrFI	CCNGG	7 cut(s)	284, 285, 641, 1101, 1230, 1265, 1301
BmrI	ACTGGG	1 cut(s)	504
BmsI	GCATC	5 cut(s)	134, 269, 541, 1074, 1168
BmuI	ACTGGG	1 cut(s)	504
BpiI	GAAGAC	2 cut(s)	186, 575
BplI	GAGNNNNNCTC	2 cut(s)	340, 372
Bpu14I	TTCGAA	1 cut(s)	730
BpuEI	CTTGAG	3 cut(s)	235, 617, 1378
BpuMI	CCSGG	4 cut(s)	284, 285, 1101, 1265
BsaBI	GATNNNNATC	1 cut(s)	375
BsaJI	CCNNGG	3 cut(s)	34, 283, 1300
Bsc4I	CCNNNNNNNGG	4 cut(s)	515, 758, 1113, 1279
Bse1I	ACTGG	5 cut(s)	510, 740, 1041, 1397, 1445
Bse21I	CCTNAGG	1 cut(s)	893
Bse8I	GATNNNNATC	1 cut(s)	375
BseBI	CCWGG	3 cut(s)	641, 1230, 1301
BseDI	CCNNGG	3 cut(s)	34, 283, 1300
BseGI	GGATG	7 cut(s)	244, 367, 394, 532, 772, 1183, 1273
BseJI	GATNNNNATC	1 cut(s)	375
BseLI	CCNNNNNNNGG	4 cut(s)	515, 758, 1113, 1279
BseMII	CTCAG	4 cut(s)	191, 288, 708, 907
BseNI	ACTGG	5 cut(s)	510, 740, 1041, 1397, 1445
BseRI	GAGGAG	1 cut(s)	572
BseSI	GKGCMC	2 cut(s)	290, 1429
BseXI	GCAGC	4 cut(s)	436, 464, 1278, 1318
Bsh1236I	CGCG	1 cut(s)	1153
Bsh1285I	CGRYCG	1 cut(s)	430
BshFI	GGCC	4 cut(s)	5, 1129, 1144, 1272
BsiEI	CGRYCG	1 cut(s)	430
BsiHKAI	GWGCWC	3 cut(s)	60, 303, 1203
BsiHKCI	CYCGRG	2 cut(s)	171, 283
BsiSI	CCGG	3 cut(s)	284, 1100, 1264
BslFI	GGGAC	2 cut(s)	266, 961
BslI	CCNNNNNNNGG	4 cut(s)	515, 758, 1113, 1279
BsmAI	GTCTC	3 cut(s)	398, 1410, 1424
BsmFI	GGGAC	2 cut(s)	266, 961
BsmI	GAATGC	1 cut(s)	632
BsnI	GGCC	4 cut(s)	5, 1129, 1144, 1272
BsoBI	CYCGRG	2 cut(s)	171, 283
Bsp119I	TTCGAA	1 cut(s)	730
Bsp1286I	GDGCHC	7 cut(s)	60, 178, 290, 303, 1106, 1203, 1429
Bsp143I	GATC	5 cut(s)	85, 376, 427, 703, 1157
Bsp19I	CCATGG	1 cut(s)	34
BspACI	CCGC	2 cut(s)	1151, 1414
BspANI	GGCC	4 cut(s)	5, 1129, 1144, 1272
BspCNI	CTCAG	4 cut(s)	190, 289, 707, 906
BspFNI	CGCG	1 cut(s)	1153
BspHI	TCATGA	1 cut(s)	1060
BspLI	GGNNCC	3 cut(s)	40, 87, 1105
BspMAI	CTGCAG	1 cut(s)	454
BspMI	ACCTGC	1 cut(s)	349
BspPI	GGATC	2 cut(s)	80, 93
BspQI	GCTCTTC	1 cut(s)	983
BspT104I	TTCGAA	1 cut(s)	730
BspTI	CTTAAG	1 cut(s)	1439
BsrI	ACTGG	5 cut(s)	510, 740, 1041, 1397, 1445
BssECI	CCNNGG	3 cut(s)	34, 283, 1300
BssMI	GATC	5 cut(s)	85, 376, 427, 703, 1157
BssSI	CACGAG	1 cut(s)	468
BssT1I	CCWWGG	1 cut(s)	34
Bst2BI	CACGAG	1 cut(s)	468
Bst2UI	CCWGG	3 cut(s)	641, 1230, 1301
Bst4CI	ACNGT	4 cut(s)	667, 1093, 1168, 1324
Bst6I	CTCTTC	2 cut(s)	849, 983
BstAFI	CTTAAG	1 cut(s)	1439
BstAPI	GCANNNNNTGC	1 cut(s)	636
BstBI	TTCGAA	1 cut(s)	730
BstC8I	GCNNGC	3 cut(s)	790, 889, 911
BstDEI	CTNAG	5 cut(s)	177, 297, 694, 893, 1409
BstDSI	CCRYGG	1 cut(s)	34
BstF5I	GGATG	7 cut(s)	244, 367, 394, 532, 772, 1183, 1273
BstFNI	CGCG	1 cut(s)	1153
BstHHI	GCGC	2 cut(s)	741, 1155
BstKTI	GATC	5 cut(s)	88, 379, 430, 706, 1160
BstMAI	GTCTC	3 cut(s)	398, 1410, 1424
BstMBI	GATC	5 cut(s)	85, 376, 427, 703, 1157
BstMCI	CGRYCG	1 cut(s)	430
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 173, 422, 431, 636, 785, 1037, 1150
BstNI	CCWGG	3 cut(s)	641, 1230, 1301
BstNSI	RCATGY	2 cut(s)	161, 1259
BstSCI	CCNGG	7 cut(s)	282, 283, 639, 1099, 1228, 1263, 1299
BstSFI	CTRYAG	2 cut(s)	450, 663
BstSLI	GKGCMC	2 cut(s)	290, 1429
BstUI	CGCG	1 cut(s)	1153
BstV1I	GCAGC	4 cut(s)	436, 464, 1278, 1318
BstV2I	GAAGAC	2 cut(s)	186, 575
BstX2I	RGATCY	1 cut(s)	85
BstYI	RGATCY	1 cut(s)	85
Bsu36I	CCTNAGG	1 cut(s)	893
BsuI	GTATCC	1 cut(s)	681
BsuRI	GGCC	4 cut(s)	5, 1129, 1144, 1272
BtgI	CCRYGG	1 cut(s)	34
BtrI	CACGTC	1 cut(s)	573
BtsCI	GGATG	7 cut(s)	244, 367, 394, 532, 772, 1183, 1273
BtsI	GCAGTG	2 cut(s)	58, 637
BtsIMutI	CAGTG	4 cut(s)	58, 637, 1173, 1452
BveI	ACCTGC	1 cut(s)	349
Cac8I	GCNNGC	3 cut(s)	790, 889, 911
CaiI	CAGNNNCTG	3 cut(s)	671, 1047, 1422
CciI	TCATGA	1 cut(s)	1060
CfoI	GCGC	2 cut(s)	741, 1155
Cfr9I	CCCGGG	1 cut(s)	283
CseI	GACGC	1 cut(s)	1283
Csp6I	GTAC	2 cut(s)	105, 1362
CviAII	CATG	8 cut(s)	35, 74, 158, 345, 494, 1054, 1061, 1256
CviQI	GTAC	2 cut(s)	105, 1362
DdeI	CTNAG	5 cut(s)	177, 297, 694, 893, 1409
DpnI	GATC	5 cut(s)	87, 378, 429, 705, 1159
DpnII	GATC	5 cut(s)	85, 376, 427, 703, 1157
DraI	TTTAAA	1 cut(s)	48
DrdI	GACNNNNNNGTC	1 cut(s)	1402
DseDI	GACNNNNNNGTC	1 cut(s)	1402
EaeI	YGGCCR	2 cut(s)	3, 1270
Eam1104I	CTCTTC	2 cut(s)	849, 983
EarI	CTCTTC	2 cut(s)	849, 983
Ecl136II	GAGCTC	1 cut(s)	301
Eco130I	CCWWGG	1 cut(s)	34
Eco24I	GRGCYC	3 cut(s)	178, 303, 1106
Eco32I	GATATC	1 cut(s)	1243
Eco53kI	GAGCTC	1 cut(s)	301
Eco81I	CCTNAGG	1 cut(s)	893
Eco88I	CYCGRG	2 cut(s)	171, 283
EcoICRI	GAGCTC	1 cut(s)	301
EcoRII	CCWGG	3 cut(s)	639, 1228, 1299
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	1 cut(s)	34
EcoT22I	ATGCAT	2 cut(s)	1089, 1261
EcoT38I	GRGCYC	3 cut(s)	178, 303, 1106
ErhI	CCWWGG	1 cut(s)	34
FaeI	CATG	8 cut(s)	38, 77, 161, 348, 497, 1057, 1064, 1259
FaqI	GGGAC	2 cut(s)	266, 961
FatI	CATG	8 cut(s)	34, 73, 157, 344, 493, 1053, 1060, 1255
FauNDI	CATATG	2 cut(s)	564, 836
FbaI	TGATCA	2 cut(s)	376, 703
Fnu4HI	GCNGC	5 cut(s)	450, 453, 1292, 1332, 1414
FokI	GGATG	7 cut(s)	231, 374, 401, 519, 779, 1190, 1280
FriOI	GRGCYC	3 cut(s)	178, 303, 1106
Fsp4HI	GCNGC	5 cut(s)	450, 453, 1292, 1332, 1414
FspBI	CTAG	3 cut(s)	408, 417, 1277
GlaI	GCGC	2 cut(s)	740, 1154
GluI	GCNGC	5 cut(s)	450, 453, 1292, 1332, 1414
HaeIII	GGCC	4 cut(s)	5, 1129, 1144, 1272
HapII	CCGG	3 cut(s)	284, 1100, 1264
HgaI	GACGC	1 cut(s)	1283
HhaI	GCGC	2 cut(s)	741, 1155
Hin1II	CATG	8 cut(s)	38, 77, 161, 348, 497, 1057, 1064, 1259
Hin6I	GCGC	2 cut(s)	739, 1153
HinP1I	GCGC	2 cut(s)	739, 1153
HincII	GTYRAC	1 cut(s)	874
HindII	GTYRAC	1 cut(s)	874
HindIII	AAGCTT	1 cut(s)	165
HinfI	GANTC	3 cut(s)	230, 353, 823
HpaII	CCGG	3 cut(s)	284, 1100, 1264
HphI	GGTGA	5 cut(s)	380, 698, 1244, 1289, 1336
Hpy166II	GTNNAC	1 cut(s)	874
Hpy188I	TCNGA	7 cut(s)	117, 298, 697, 804, 1162, 1320, 1354
Hpy188III	TCNNGA	6 cut(s)	252, 359, 617, 982, 1061, 1277
Hpy8I	GTNNAC	1 cut(s)	874
HpyAV	CCTTC	2 cut(s)	76, 1134
HpyCH4III	ACNGT	4 cut(s)	667, 1093, 1168, 1324
HpyCH4IV	ACGT	2 cut(s)	572, 646
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 173, 422, 431, 636, 785, 1037, 1150
HpyF3I	CTNAG	5 cut(s)	177, 297, 694, 893, 1409
HpySE526I	ACGT	2 cut(s)	572, 646
Hsp92II	CATG	8 cut(s)	38, 77, 161, 348, 497, 1057, 1064, 1259
HspAI	GCGC	2 cut(s)	739, 1153
Ksp22I	TGATCA	2 cut(s)	376, 703
Kzo9I	GATC	5 cut(s)	85, 376, 427, 703, 1157
LguI	GCTCTTC	1 cut(s)	983
LmnI	GCTCC	6 cut(s)	38, 55, 122, 559, 752, 1109
Lsp1109I	GCAGC	4 cut(s)	436, 464, 1278, 1318
LweI	GCATC	5 cut(s)	134, 269, 541, 1074, 1168
MaeI	CTAG	3 cut(s)	408, 417, 1277
MaeII	ACGT	2 cut(s)	572, 646
MaeIII	GTNAC	1 cut(s)	1295
MalI	GATC	5 cut(s)	87, 378, 429, 705, 1159
MboI	GATC	5 cut(s)	85, 376, 427, 703, 1157
MboII	GAAGA	8 cut(s)	186, 580, 866, 970, 1220, 1322, 1392, 1425
MflI	RGATCY	1 cut(s)	85
MhlI	GDGCHC	7 cut(s)	60, 178, 290, 303, 1106, 1203, 1429
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	6 cut(s)	205, 460, 867, 969, 1118, 1211
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	782
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	1089, 1261
MroXI	GAANNNNTTC	1 cut(s)	648
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	47, 162, 605, 1440, 1456
MslI	CAYNNNNRTG	1 cut(s)	492
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	455
MspCI	CTTAAG	1 cut(s)	1439
MspI	CCGG	3 cut(s)	284, 1100, 1264
MspR9I	CCNGG	7 cut(s)	284, 285, 641, 1101, 1230, 1265, 1301
Mva1269I	GAATGC	1 cut(s)	632
MvaI	CCWGG	3 cut(s)	641, 1230, 1301
MvnI	CGCG	1 cut(s)	1153
MwoI	GCNNNNNNNGC	8 cut(s)	38, 173, 422, 431, 636, 785, 1037, 1150
NciI	CCSGG	4 cut(s)	284, 285, 1101, 1265
NcoI	CCATGG	1 cut(s)	34
NdeI	CATATG	2 cut(s)	564, 836
NdeII	GATC	5 cut(s)	85, 376, 427, 703, 1157
NlaIII	CATG	8 cut(s)	38, 77, 161, 348, 497, 1057, 1064, 1259
NlaIV	GGNNCC	3 cut(s)	40, 87, 1105
NmuCI	GTSAC	1 cut(s)	1295
NsiI	ATGCAT	2 cut(s)	1089, 1261
NspI	RCATGY	2 cut(s)	161, 1259
NspV	TTCGAA	1 cut(s)	730
PagI	TCATGA	1 cut(s)	1060
PciI	ACATGT	1 cut(s)	157
PciSI	GCTCTTC	1 cut(s)	983
PctI	GAATGC	1 cut(s)	632
PdmI	GAANNNNTTC	1 cut(s)	648
PfeI	GAWTC	3 cut(s)	230, 353, 823
PflMI	CCANNNNNTGG	1 cut(s)	758
PkrI	GCNGC	5 cut(s)	451, 454, 1293, 1333, 1415
Ple19I	CGATCG	1 cut(s)	430
PscI	ACATGT	1 cut(s)	157
PsiI	TTATAA	1 cut(s)	963
Psp124BI	GAGCTC	1 cut(s)	303
Psp6I	CCWGG	3 cut(s)	639, 1228, 1299
PspGI	CCWGG	3 cut(s)	639, 1228, 1299
PspN4I	GGNNCC	3 cut(s)	40, 87, 1105
PstI	CTGCAG	1 cut(s)	454
PstNI	CAGNNNCTG	3 cut(s)	671, 1047, 1422
PsuI	RGATCY	1 cut(s)	85
PvuI	CGATCG	1 cut(s)	430
PvuII	CAGCTG	1 cut(s)	455
RsaI	GTAC	2 cut(s)	106, 1363
RsaNI	GTAC	2 cut(s)	105, 1362
RseI	CAYNNNNRTG	1 cut(s)	492
SacI	GAGCTC	1 cut(s)	303
SapI	GCTCTTC	1 cut(s)	983
SaqAI	TTAA	5 cut(s)	47, 162, 605, 1440, 1456
SatI	GCNGC	5 cut(s)	450, 453, 1292, 1332, 1414
Sau3AI	GATC	5 cut(s)	85, 376, 427, 703, 1157
ScaI	AGTACT	1 cut(s)	1363
ScrFI	CCNGG	7 cut(s)	284, 285, 641, 1101, 1230, 1265, 1301
SduI	GDGCHC	7 cut(s)	60, 178, 290, 303, 1106, 1203, 1429
SfaNI	GCATC	5 cut(s)	134, 269, 541, 1074, 1168
SfcI	CTRYAG	2 cut(s)	450, 663
SfuI	TTCGAA	1 cut(s)	730
SmaI	CCCGGG	1 cut(s)	285
SmiMI	CAYNNNNRTG	1 cut(s)	492
SmlI	CTYRAG	4 cut(s)	250, 596, 1357, 1439
SmoI	CTYRAG	4 cut(s)	250, 596, 1357, 1439
Sse9I	AATT	6 cut(s)	205, 460, 867, 969, 1118, 1211
SsiI	CCGC	2 cut(s)	1151, 1414
SspI	AATATT	1 cut(s)	1339
SspMI	CTAG	3 cut(s)	408, 417, 1277
SstI	GAGCTC	1 cut(s)	303
StyD4I	CCNGG	7 cut(s)	282, 283, 639, 1099, 1228, 1263, 1299
StyI	CCWWGG	1 cut(s)	34
TaaI	ACNGT	4 cut(s)	667, 1093, 1168, 1324
TaiI	ACGT	2 cut(s)	575, 649
TaqI	TCGA	3 cut(s)	142, 730, 1197
TasI	AATT	6 cut(s)	205, 460, 867, 969, 1118, 1211
TatI	WGTACW	1 cut(s)	1361
TauI	GCSGC	1 cut(s)	1416
TfiI	GAWTC	3 cut(s)	230, 353, 823
Tru1I	TTAA	5 cut(s)	47, 162, 605, 1440, 1456
Tru9I	TTAA	5 cut(s)	47, 162, 605, 1440, 1456
TscAI	CASTG	4 cut(s)	65, 637, 1173, 1452
TseFI	GTSAC	1 cut(s)	1295
TseI	GCWGC	4 cut(s)	449, 452, 1291, 1331
Tsp45I	GTSAC	1 cut(s)	1295
TspDTI	ATGAA	8 cut(s)	168, 186, 432, 482, 581, 998, 1112, 1323
TspMI	CCCGGG	1 cut(s)	283
TspRI	CASTG	4 cut(s)	65, 637, 1173, 1452
Van91I	CCANNNNNTGG	1 cut(s)	758
Vha464I	CTTAAG	1 cut(s)	1439
XapI	RAATTY	2 cut(s)	205, 1118
XbaI	TCTAGA	1 cut(s)	1276
XceI	RCATGY	2 cut(s)	161, 1259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	834
XmaI	CCCGGG	1 cut(s)	283
XmnI	GAANNNNTTC	1 cut(s)	648
XspI	CTAG	3 cut(s)	408, 417, 1277
ZrmI	AGTACT	1 cut(s)	1363
Zsp2I	ATGCAT	2 cut(s)	1089, 1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.