Rroxscaffold_5G00362980

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014233
Physical Location & Seq
Forward (+)
44029550 .. 44032453
2904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00362980.1

Sequence Viewer

Length: 1032 bp
ATGCTGGCGAGGGAATCGAGCAGTTCGAACTTCGATCTTCCCGAGGAAGTGCTGCAAGTTCTGCCGGCCGATCCTTTCGAGCAGCTCGATGTGGCCCGCAAGATCACCTCCATTGCCCTCGCGACACGTGTCTCCTCCCTGGAGTCCGAGGCCGACGCTCTTCGCGCCCAGCTCGCCGACAAGGACCACCTCGTCGCCGACCTCCAGGCCCAGGTCCAGTCCCTCGGCGCCTCTCTCTCCGACGCCGCCGACAAGCTCGCCCTCGCCGAGCAGGAAAAGGAGGAGTTGTTGAAGGAGAAGAGCTACCTGTCCAATACTGTGAGGAAGCTCAACAGAGATGTCTCCAAGTTGGAGGTGTTCAGAAAGACGCTTATGCGTTCGCTGCAGGAGGAGGAAGAGAGTGGAGCTTCGGAAGTGGTTGCTACTAAGGCGGAGAAGCAGACCGAAGAGAGCTTATCTTCTCAATCGCAGACTGGACCTGCAGAACATGATGCCACATTACCACCTTCGAGAACATCTTCAATCCAAAGCCAATTCTCTGAAACAGGAAGCACATATACTGAGGATCGTGACCCAAATGCCTCGAGGGCTCCTCGCATATCACCGGGGCTCCTATTAGCATCCCAAACCAGCACACCGCGGCTTACTCCCCCTGGTTCTCCTCCTATCTATTCGGCATCCACATCCCCAACTAGGACATCAAAGCCGGCGTCCCCAAGGCGACATTCCATGTCATTTGCTACCTCAAGAGGCATGTTTGATGATAGATCTTCGGTGCCCTCAAGCCATCACGGCTCCATGCCAGGCGCTGAACATGGAAGGACTCGAGTGGATGGGAAAGAATTTTTCCGCCAAGTCAGGAGTCGTTTGTCTTATGAGCAGTTTGGTGCATTTCTGGCAAATGTTAAGGAACTAAATGCCCACAAGCAAACAAAAGAGGAGACTCTGCATAAAGCTGATGAGATATTTGGCCCAGATAATAAGGATCTATATGTCATATTTGAAGGATTGATCAGTCGTAATGTCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

343

Amino Acids

37.68

Weight (kDa)

5.69

Isoelectric Point (pI)

58.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
At4g15545_C PF25972 276 - 341 6.2e-34 At4g15545-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014233)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15545
fragaria_vesca FvH4_4g16760
malus_domestica MD13G1176600.v1.1 MD16G1178400.v1.1
prunus_persica Prupe.1G145800_v2.0.a1 Prupe.1G145800_v2.0.a1
pyrus_communis pycom13g15240 pycom16g14990
rosa_chinensis RchiOBHm_Chr4g0420331
rosa_laevigata RLG00000007772
rosa_roxburghii Rroxscaffold_5G00362980
rosa_samantha Rh4AG224500 Rh4BG227500 Rh4CG239000 Rh4DG223000
rosa_wichuraiana Rw0G005760 Rw4G019380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 191
AbsI CCTCGAGG 1 cut(s) 583
Acc36I ACCTGC 1 cut(s) 487
AccB1I GGYRCC 2 cut(s) 227, 775
AccII CGCG 3 cut(s) 122, 165, 640
AciI CCGC 6 cut(s) 97, 246, 431, 638, 640, 850
AclWI GGATC 3 cut(s) 65, 573, 993
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 1 cut(s) 842
AcvI CACGTG 1 cut(s) 128
AcyI GRCGYC 3 cut(s) 228, 243, 710
AfiI CCNNNNNNNGG 2 cut(s) 211, 693
AflIII ACRYGT 2 cut(s) 125, 127
AgsI TTSAA 3 cut(s) 292, 522, 1004
AjnI CCWGG 5 cut(s) 138, 204, 210, 652, 802
AjuI GAANNNNNNNTTGG 2 cut(s) 709, 741
AluBI AGCT 8 cut(s) 85, 172, 256, 303, 328, 407, 453, 956
AluI AGCT 8 cut(s) 85, 172, 256, 303, 328, 407, 453, 956
Alw26I GTCTC 3 cut(s) 136, 346, 935
AlwI GGATC 3 cut(s) 65, 573, 993
AlwNI CAGNNNCTG 1 cut(s) 809
Ama87I CYCGRG 3 cut(s) 41, 583, 825
AoxI GGCC 5 cut(s) 66, 93, 150, 207, 970
ApeKI GCWGC 3 cut(s) 52, 82, 382
ApoI RAATTY 1 cut(s) 842
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
Asp700I GAANNNNTTC 1 cut(s) 517
AspLEI GCGC 3 cut(s) 167, 230, 809
AspS9I GGNCC 6 cut(s) 94, 184, 208, 214, 476, 971
AsuC2I CCSGG 1 cut(s) 606
AsuHPI GGTGA 2 cut(s) 97, 594
AsuII TTCGAA 1 cut(s) 26
AvaI CYCGRG 3 cut(s) 41, 583, 825
AvaII GGWCC 3 cut(s) 184, 214, 476
BaeGI GKGCMC 1 cut(s) 780
BanI GGYRCC 2 cut(s) 227, 775
BanII GRGCYC 2 cut(s) 592, 612
BarI GAAGNNNNNNTAC 2 cut(s) 541, 573
BbrPI CACGTG 1 cut(s) 128
BbvI GCAGC 3 cut(s) 39, 94, 369
BccI CCATC 2 cut(s) 795, 827
BceAI ACGGC 1 cut(s) 808
BciT130I CCWGG 5 cut(s) 140, 206, 212, 654, 804
BclI TGATCA 1 cut(s) 1011
BcnI CCSGG 1 cut(s) 606
BcoDI GTCTC 3 cut(s) 136, 346, 935
BfaI CTAG 1 cut(s) 693
BfmI CTRYAG 2 cut(s) 383, 480
BfoI RGCGCY 2 cut(s) 231, 810
BfuAI ACCTGC 1 cut(s) 487
BglI GCCNNNNNGGC 2 cut(s) 587, 792
BglII AGATCT 1 cut(s) 767
BisI GCNGC 5 cut(s) 53, 83, 246, 383, 641
BlsI GCNGC 5 cut(s) 54, 84, 247, 384, 642
Bme1390I CCNGG 6 cut(s) 140, 206, 212, 606, 654, 804
Bme18I GGWCC 3 cut(s) 184, 214, 476
BmeT110I CYCGRG 3 cut(s) 41, 583, 825
BmgT120I GGNCC 6 cut(s) 94, 184, 208, 214, 476, 971
BmiI GGNNCC 5 cut(s) 229, 591, 611, 777, 796
BmrFI CCNGG 6 cut(s) 140, 206, 212, 606, 654, 804
BmsI GCATC 3 cut(s) 481, 629, 686
BoxI GACNNNNGTC 1 cut(s) 128
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 2 cut(s) 161, 188
Bpu14I TTCGAA 1 cut(s) 26
BpuEI CTTGAG 2 cut(s) 730, 766
BpuMI CCSGG 1 cut(s) 606
BsaAI YACGTR 1 cut(s) 128
BsaHI GRCGYC 3 cut(s) 228, 243, 710
BsaJI CCNNGG 9 cut(s) 42, 138, 147, 210, 223, 605, 638, 652, 716
BsaXI ACNNNNNCTCC 4 cut(s) 272, 302, 594, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 211, 693
Bse118I RCCGGY 2 cut(s) 64, 706
Bse1I ACTGG 2 cut(s) 217, 478
Bse3DI GCAATG 1 cut(s) 111
BseBI CCWGG 5 cut(s) 140, 206, 212, 654, 804
BseDI CCNNGG 9 cut(s) 42, 138, 147, 210, 223, 605, 638, 652, 716
BseGI GGATG 4 cut(s) 620, 677, 683, 838
BseLI CCNNNNNNNGG 2 cut(s) 211, 693
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 1 cut(s) 552
BseNI ACTGG 2 cut(s) 217, 478
BseRI GAGGAG 6 cut(s) 124, 296, 404, 582, 651, 953
BseSI GKGCMC 1 cut(s) 780
BseX3I CGGCCG 1 cut(s) 66
BseXI GCAGC 3 cut(s) 39, 94, 369
BseYI CCCAGC 1 cut(s) 168
Bsh1236I CGCG 3 cut(s) 122, 165, 640
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 5 cut(s) 68, 95, 152, 209, 972
BshNI GGYRCC 2 cut(s) 227, 775
BsiEI CGRYCG 1 cut(s) 69
BsiHKCI CYCGRG 3 cut(s) 41, 583, 825
BsiSI CCGG 3 cut(s) 65, 605, 707
BslFI GGGAC 2 cut(s) 205, 697
BslI CCNNNNNNNGG 2 cut(s) 211, 693
BsmAI GTCTC 3 cut(s) 136, 346, 935
BsmFI GGGAC 2 cut(s) 205, 697
BsnI GGCC 5 cut(s) 68, 95, 152, 209, 972
BsoBI CYCGRG 3 cut(s) 41, 583, 825
Bsp119I TTCGAA 1 cut(s) 26
Bsp1286I GDGCHC 3 cut(s) 592, 612, 780
Bsp143I GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
Bsp68I TCGCGA 1 cut(s) 122
BspACI CCGC 6 cut(s) 97, 246, 431, 638, 640, 850
BspANI GGCC 5 cut(s) 68, 95, 152, 209, 972
BspCNI CTCAG 1 cut(s) 553
BspFNI CGCG 3 cut(s) 122, 165, 640
BspLI GGNNCC 5 cut(s) 229, 591, 611, 777, 796
BspMAI CTGCAG 2 cut(s) 387, 484
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 3 cut(s) 65, 573, 993
BspQI GCTCTTC 2 cut(s) 165, 293
BspT104I TTCGAA 1 cut(s) 26
BspT107I GGYRCC 2 cut(s) 227, 775
BsrDI GCAATG 1 cut(s) 111
BsrFI RCCGGY 2 cut(s) 64, 706
BsrI ACTGG 2 cut(s) 217, 478
BssAI RCCGGY 2 cut(s) 64, 706
BssECI CCNNGG 9 cut(s) 42, 138, 147, 210, 223, 605, 638, 652, 716
BssMI GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
BssNI GRCGYC 3 cut(s) 228, 243, 710
BssT1I CCWWGG 1 cut(s) 716
Bst2UI CCWGG 5 cut(s) 140, 206, 212, 654, 804
Bst4CI ACNGT 1 cut(s) 319
Bst6I CTCTTC 4 cut(s) 165, 293, 390, 441
BstACI GRCGYC 3 cut(s) 228, 243, 710
BstAPI GCANNNNNTGC 1 cut(s) 61
BstBAI YACGTR 1 cut(s) 128
BstBI TTCGAA 1 cut(s) 26
BstC8I GCNNGC 6 cut(s) 6, 66, 97, 174, 258, 708
BstDEI CTNAG 2 cut(s) 426, 561
BstDSI CCRYGG 1 cut(s) 638
BstF5I GGATG 4 cut(s) 620, 677, 683, 838
BstFNI CGCG 3 cut(s) 122, 165, 640
BstH2I RGCGCY 2 cut(s) 231, 810
BstHHI GCGC 3 cut(s) 167, 230, 809
BstKTI GATC 7 cut(s) 37, 73, 105, 568, 770, 988, 1014
BstMAI GTCTC 3 cut(s) 136, 346, 935
BstMBI GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 8 cut(s) 61, 164, 173, 382, 428, 587, 792, 896
BstNI CCWGG 5 cut(s) 140, 206, 212, 654, 804
BstNSI RCATGY 1 cut(s) 757
BstPAI GACNNNNGTC 1 cut(s) 128
BstSCI CCNGG 6 cut(s) 138, 204, 210, 604, 652, 802
BstSFI CTRYAG 2 cut(s) 383, 480
BstSLI GKGCMC 1 cut(s) 780
BstUI CGCG 3 cut(s) 122, 165, 640
BstV1I GCAGC 3 cut(s) 39, 94, 369
BstX2I RGATCY 2 cut(s) 767, 985
BstYI RGATCY 2 cut(s) 767, 985
BstZI CGGCCG 1 cut(s) 66
BsuRI GGCC 5 cut(s) 68, 95, 152, 209, 972
BtgI CCRYGG 1 cut(s) 638
BtsCI GGATG 4 cut(s) 620, 677, 683, 838
BtuMI TCGCGA 1 cut(s) 122
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 6 cut(s) 6, 66, 97, 174, 258, 708
CaiI CAGNNNCTG 1 cut(s) 809
CfoI GCGC 3 cut(s) 167, 230, 809
Cfr10I RCCGGY 2 cut(s) 64, 706
Cfr13I GGNCC 6 cut(s) 94, 184, 208, 214, 476, 971
Cfr42I CCGCGG 1 cut(s) 641
CseI GACGC 4 cut(s) 164, 251, 376, 699
CviAII CATG 5 cut(s) 488, 730, 754, 799, 815
DdeI CTNAG 2 cut(s) 426, 561
DinI GGCGCC 1 cut(s) 229
DpnI GATC 7 cut(s) 36, 72, 104, 567, 769, 987, 1013
DpnII GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
EaeI YGGCCR 1 cut(s) 66
EagI CGGCCG 1 cut(s) 66
Eam1104I CTCTTC 4 cut(s) 165, 293, 390, 441
EarI CTCTTC 4 cut(s) 165, 293, 390, 441
EciI GGCGGA 2 cut(s) 446, 839
EclXI CGGCCG 1 cut(s) 66
Eco130I CCWWGG 1 cut(s) 716
Eco24I GRGCYC 2 cut(s) 592, 612
Eco47I GGWCC 3 cut(s) 184, 214, 476
Eco52I CGGCCG 1 cut(s) 66
Eco72I CACGTG 1 cut(s) 128
Eco88I CYCGRG 3 cut(s) 41, 583, 825
EcoRII CCWGG 5 cut(s) 138, 204, 210, 652, 802
EcoT14I CCWWGG 1 cut(s) 716
EcoT38I GRGCYC 2 cut(s) 592, 612
EgeI GGCGCC 1 cut(s) 229
EheI GGCGCC 1 cut(s) 229
ErhI CCWWGG 1 cut(s) 716
FaeI CATG 5 cut(s) 491, 733, 757, 802, 818
FaqI GGGAC 2 cut(s) 205, 697
FatI CATG 5 cut(s) 487, 729, 753, 798, 814
FauI CCCGC 1 cut(s) 104
FbaI TGATCA 1 cut(s) 1011
Fnu4HI GCNGC 5 cut(s) 53, 83, 246, 383, 641
FokI GGATG 4 cut(s) 607, 664, 670, 845
FriOI GRGCYC 2 cut(s) 592, 612
Fsp4HI GCNGC 5 cut(s) 53, 83, 246, 383, 641
FspBI CTAG 1 cut(s) 693
GlaI GCGC 3 cut(s) 166, 229, 808
GluI GCNGC 5 cut(s) 53, 83, 246, 383, 641
GsaI CCCAGC 1 cut(s) 172
GsuI CTGGAG 2 cut(s) 161, 188
HaeII RGCGCY 2 cut(s) 231, 810
HaeIII GGCC 5 cut(s) 68, 95, 152, 209, 972
HapII CCGG 3 cut(s) 65, 605, 707
HgaI GACGC 4 cut(s) 164, 251, 376, 699
HhaI GCGC 3 cut(s) 167, 230, 809
Hin1I GRCGYC 3 cut(s) 228, 243, 710
Hin1II CATG 5 cut(s) 491, 733, 757, 802, 818
Hin6I GCGC 3 cut(s) 165, 228, 807
HinP1I GCGC 3 cut(s) 165, 228, 807
HinfI GANTC 5 cut(s) 14, 143, 823, 862, 943
HpaII CCGG 3 cut(s) 65, 605, 707
HphI GGTGA 2 cut(s) 97, 594
Hpy188I TCNGA 5 cut(s) 148, 241, 362, 412, 541
Hpy188III TCNNGA 6 cut(s) 41, 121, 510, 569, 747, 859
Hpy99I CGWCG 3 cut(s) 158, 197, 245
HpyAV CCTTC 4 cut(s) 286, 516, 813, 998
HpyCH4III ACNGT 1 cut(s) 319
HpyCH4IV ACGT 1 cut(s) 127
HpyCH4V TGCA 5 cut(s) 55, 385, 482, 890, 949
HpyF10VI GCNNNNNNNGC 8 cut(s) 61, 164, 173, 382, 428, 587, 792, 896
HpyF3I CTNAG 2 cut(s) 426, 561
HpySE526I ACGT 1 cut(s) 127
Hsp92I GRCGYC 3 cut(s) 228, 243, 710
Hsp92II CATG 5 cut(s) 491, 733, 757, 802, 818
HspAI GCGC 3 cut(s) 165, 228, 807
KasI GGCGCC 1 cut(s) 227
KroI GCCGGC 2 cut(s) 64, 706
KroNI GCCGGC 2 cut(s) 66, 708
Ksp22I TGATCA 1 cut(s) 1011
KspI CCGCGG 1 cut(s) 641
Kzo9I GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
LguI GCTCTTC 2 cut(s) 165, 293
LmnI GCTCC 4 cut(s) 404, 595, 615, 800
Lsp1109I GCAGC 3 cut(s) 39, 94, 369
LweI GCATC 3 cut(s) 481, 629, 686
MaeI CTAG 1 cut(s) 693
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 1 cut(s) 569
MalI GATC 7 cut(s) 36, 72, 104, 567, 769, 987, 1013
MboI GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
MboII GAAGA 8 cut(s) 29, 152, 310, 407, 450, 458, 510, 762
MflI RGATCY 2 cut(s) 767, 985
MhlI GDGCHC 3 cut(s) 592, 612, 780
MluCI AATT 2 cut(s) 533, 842
Mly113I GGCGCC 1 cut(s) 228
MlyI GAGTC 4 cut(s) 152, 817, 871, 937
MmeI TCCRAC 2 cut(s) 264, 330
MroNI GCCGGC 2 cut(s) 64, 706
MroXI GAANNNNTTC 1 cut(s) 517
MseI TTAA 2 cut(s) 906, 1030
MspA1I CMGCKG 1 cut(s) 640
MspI CCGG 3 cut(s) 65, 605, 707
MspR9I CCNGG 6 cut(s) 140, 206, 212, 606, 654, 804
MvaI CCWGG 5 cut(s) 140, 206, 212, 654, 804
MvnI CGCG 3 cut(s) 122, 165, 640
MwoI GCNNNNNNNGC 8 cut(s) 61, 164, 173, 382, 428, 587, 792, 896
NaeI GCCGGC 2 cut(s) 66, 708
NarI GGCGCC 1 cut(s) 228
NciI CCSGG 1 cut(s) 606
NdeII GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
NgoMIV GCCGGC 2 cut(s) 64, 706
NlaIII CATG 5 cut(s) 491, 733, 757, 802, 818
NlaIV GGNNCC 5 cut(s) 229, 591, 611, 777, 796
NmeAIII GCCGAG 2 cut(s) 204, 292
NmuCI GTSAC 1 cut(s) 569
NruI TCGCGA 1 cut(s) 122
NspI RCATGY 1 cut(s) 757
NspV TTCGAA 1 cut(s) 26
PaeR7I CTCGAG 2 cut(s) 583, 825
PciSI GCTCTTC 2 cut(s) 165, 293
PcsI WCGNNNNNNNCGW 4 cut(s) 23, 39, 84, 264
PdiI GCCGGC 2 cut(s) 66, 708
PdmI GAANNNNTTC 1 cut(s) 517
PfeI GAWTC 1 cut(s) 14
PkrI GCNGC 5 cut(s) 54, 84, 247, 384, 642
PleI GAGTC 4 cut(s) 151, 817, 870, 937
PluTI GGCGCC 1 cut(s) 231
PmaCI CACGTG 1 cut(s) 128
PmlI CACGTG 1 cut(s) 128
PpsI GAGTC 4 cut(s) 151, 817, 870, 937
Ppu21I YACGTR 1 cut(s) 128
PshAI GACNNNNGTC 1 cut(s) 128
Psp6I CCWGG 5 cut(s) 138, 204, 210, 652, 802
PspCI CACGTG 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 168
PspGI CCWGG 5 cut(s) 138, 204, 210, 652, 802
PspN4I GGNNCC 5 cut(s) 229, 591, 611, 777, 796
PspPI GGNCC 6 cut(s) 94, 184, 208, 214, 476, 971
PspXI VCTCGAGB 2 cut(s) 583, 825
PstI CTGCAG 2 cut(s) 387, 484
PstNI CAGNNNCTG 1 cut(s) 809
PsuI RGATCY 2 cut(s) 767, 985
RruI TCGCGA 1 cut(s) 122
SacII CCGCGG 1 cut(s) 641
SapI GCTCTTC 2 cut(s) 165, 293
SaqAI TTAA 2 cut(s) 906, 1030
SatI GCNGC 5 cut(s) 53, 83, 246, 383, 641
Sau3AI GATC 7 cut(s) 34, 70, 102, 565, 767, 985, 1011
Sau96I GGNCC 6 cut(s) 94, 184, 208, 214, 476, 971
SchI GAGTC 4 cut(s) 152, 817, 871, 937
ScrFI CCNGG 6 cut(s) 140, 206, 212, 606, 654, 804
SduI GDGCHC 3 cut(s) 592, 612, 780
SfaNI GCATC 3 cut(s) 481, 629, 686
SfcI CTRYAG 2 cut(s) 383, 480
SfoI GGCGCC 1 cut(s) 229
Sfr274I CTCGAG 2 cut(s) 583, 825
Sfr303I CCGCGG 1 cut(s) 641
SfuI TTCGAA 1 cut(s) 26
SgrBI CCGCGG 1 cut(s) 641
SinI GGWCC 3 cut(s) 184, 214, 476
SlaI CTCGAG 2 cut(s) 583, 825
SmlI CTYRAG 4 cut(s) 583, 745, 781, 825
SmoI CTYRAG 4 cut(s) 583, 745, 781, 825
Sse9I AATT 2 cut(s) 533, 842
SsiI CCGC 6 cut(s) 97, 246, 431, 638, 640, 850
SspDI GGCGCC 1 cut(s) 227
SspMI CTAG 1 cut(s) 693
StyD4I CCNGG 6 cut(s) 138, 204, 210, 604, 652, 802
StyI CCWWGG 1 cut(s) 716
TaaI ACNGT 1 cut(s) 319
TaiI ACGT 1 cut(s) 130
TaqI TCGA 8 cut(s) 17, 26, 33, 78, 87, 509, 584, 826
TaqII GACCGA 1 cut(s) 458
TasI AATT 2 cut(s) 533, 842
TauI GCSGC 2 cut(s) 248, 643
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 2 cut(s) 906, 1030
Tru9I TTAA 2 cut(s) 906, 1030
TseFI GTSAC 1 cut(s) 569
TseI GCWGC 3 cut(s) 52, 82, 382
Tsp45I GTSAC 1 cut(s) 569
VpaK11BI GGWCC 3 cut(s) 184, 214, 476
XapI RAATTY 1 cut(s) 842
XceI RCATGY 1 cut(s) 757
XhoI CTCGAG 2 cut(s) 583, 825
XmnI GAANNNNTTC 1 cut(s) 517
XspI CTAG 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.