Rroxscaffold_5G00363330

Beta-amylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0013209
Physical Location & Seq
Reverse (-)
44528922 .. 44531393
2472 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00363330.1

Sequence Viewer

Length: 1593 bp
ATGGAGGTTTCTGTGGTTCGAAGCTCTCAGGTGAAGATCGGAAGGGCTGAATTGGGGCGCAGGGAGTTGGGGTTTTGTAAATTGAGTGGTAATTTGAGGACCCAGATAAGCTTTCGTCAAAACACGAGCTGGAAAAATGGCCGGCTTCAGTTTACTCTCAGGGCTGTTCAGTCTGAATCGGTTCGACCCGTTAAAGCTTCGGGTCCTTCCACAAGACCCAAATCGGATGACGGCTTAAGACTATTCGTTGGATTGCCCCTGGATGCAGTTTCAGACTGCAATTCGGTGAAGCATGCCCGAGCAATTGCGGTTGGACTAATGGCTCTGAAGCTATTGGGAGTGACAGGCGTGGAGCTTCCTGTCTGGTGGGGAATTGTTGAGAAAGAAGCCATGGGGAAGTATGAGTGGTCTGCCTACCATTCTCTAGCAGAGATGGTTCAGAAAGCCGGTCTTGAGCTGCATGTGTCGCTCTGCTTCCATGCTTCTAAACAACCGAAGATCTCACTCCCCGATTGGGTGTCTTGCTTAGGGGAGTCCCAACCTGGTATGTTTTTCAAAGACAGGTCAGGGCAGCAATACAAGGAGTGCTTATCACTGGCTGTTGATGAGCTTCCTGTTCTTAATGGAAAGACTCCGATTCAAGTTTACCATGATTTCTGCGAAAGCTTTAAAGCTTCGTTCTCGCCTTTCCTTGGTTCCACAATCACGGGCGTCTCAGTGAGCCTAGGACCAGATGGTGAGCTTCGGTATCCTTCTCATCACCAGTCAGTCAAACGTAGCAAAATTCCCGGCGTTGGCGAATTCCAATGTTTTGATGAAAACATGCTCGGTGTTCTTAAACAACATGCTGAGGCAACCGGAAATCCTTTATGGGGTCTTGGCGGTCCCCATGATGCTCCGAGCTATGACCAGTCACCGGACTCAAACACTTTCTTCAAGGACCATGGGGGATCATGGGAGTCACCATATGGTGATTTCTTCCTGTCCTGGTACTCAAACCAGCTAATCTCTCATGGAGATCGGATCCTTTCCCTTGCTTCTTCAACTTTTGGTGACACAGAAGTCACAATATATGGCAAAGTCCCTCTAATGCACACTTGGTACAAAACAAGGTCTCACCCATCCGAGTTGACATCTGGGTTTTATAATACATCCTCTCGAGATGGTTATGAAGCAGTTGGAGATATGTTTGCAAGAAACTCCTGCAAAATGATATTACCGGGACTGGACTTATCAGACGTACATCAACCGCACGAATCCCGTTCTAGTCCCGAGTCATTACTATCACAAATTAGAACAGCGTGCAAAAAGTACGGAGTTGAAATTTCTGGTCAAAACTCATCAATTTCAGGAGCTCCAGGAGGCTTTCAACAGATAAAGAAGAACTTGTTAGGAGAGAACAAAATAGACTTGTTCACTTATCAGAGAATGGGAGCTTATTTCTTCTCACCTGAGCATTTTCCTTCATTTTCTGGATTCGTCCGAAGCCTTAATCAAGTGGAATTGCAGTCAGATGATCTAGTTTCTGACGAAGAAGCTACTGAATCTATTCATGTCAACTCAGAACCAGGAATCCACATGCAAGCCGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_14

Protein Analysis

530

Amino Acids

58.48

Weight (kDa)

6.32

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_14 PF01373 82 - 482 1.2e-95 Glycosyl hydrolase family 14
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18670
fragaria_vesca FvH4_4g17180 FvH4_4g17180
malus_domestica MD13G1174000.v1.1 MD16G1175300.v1.1
prunus_persica Prupe.1G142400_v2.0.a1
pyrus_communis pycom13g14970 pycom16g14700
rosa_chinensis RchiOBHm_Chr4g0420971
rosa_laevigata RLG00000007716
rosa_multiflora Rmu_sc0015981.1_g000002
rosa_roxburghii Rroxscaffold_5G00363330
rosa_rugosa Rorug04G0167500
rosa_samantha Rh4AG228600 Rh4BG231800 Rh4CG243500 Rh4DG227200
rosa_wichuraiana Rw4G019790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
AasI GACNNNNNNGTC 1 cut(s) 1061
AciI CCGC 4 cut(s) 308, 882, 1250, 1587
AclWI GGATC 3 cut(s) 958, 1018, 1031
AcoI YGGCCR 1 cut(s) 139
AcsI RAATTY 3 cut(s) 783, 800, 1323
AcuI CTGAAG 2 cut(s) 131, 347
AcyI GRCGYC 1 cut(s) 711
AfaI GTAC 4 cut(s) 992, 1103, 1242, 1313
AfiI CCNNNNNNNGG 5 cut(s) 514, 692, 794, 872, 916
AflII CTTAAG 1 cut(s) 235
AgsI TTSAA 6 cut(s) 556, 641, 937, 1044, 1322, 1370
AjnI CCWGG 5 cut(s) 258, 541, 986, 1357, 1567
AloI GAACNNNNNNTCC 2 cut(s) 1557, 1589
Alw21I GWGCWC 1 cut(s) 1357
Alw26I GTCTC 2 cut(s) 718, 1119
AlwI GGATC 3 cut(s) 958, 1018, 1031
Ama87I CYCGRG 3 cut(s) 297, 1158, 1271
AoxI GGCC 1 cut(s) 139
ApeKI GCWGC 2 cut(s) 457, 571
ApoI RAATTY 3 cut(s) 783, 800, 1323
Asp700I GAANNNNTTC 2 cut(s) 180, 1548
AspA2I CCTAGG 1 cut(s) 724
AspLEI GCGC 1 cut(s) 60
AspS9I GGNCC 5 cut(s) 99, 203, 728, 884, 940
AsuC2I CCSGG 2 cut(s) 789, 1221
AsuII TTCGAA 1 cut(s) 19
AvaI CYCGRG 3 cut(s) 297, 1158, 1271
AvaII GGWCC 5 cut(s) 99, 203, 728, 884, 940
AvrII CCTAGG 1 cut(s) 724
BamHI GGATCC 1 cut(s) 1023
BanII GRGCYC 1 cut(s) 1357
BauI CACGAG 1 cut(s) 124
Bbv12I GWGCWC 1 cut(s) 1357
BbvCI CCTCAGC 1 cut(s) 849
BbvI GCAGC 2 cut(s) 444, 583
BccI CCATC 4 cut(s) 427, 728, 1129, 1157
BceAI ACGGC 1 cut(s) 247
BciT130I CCWGG 5 cut(s) 260, 543, 988, 1359, 1569
BciVI GTATCC 1 cut(s) 759
BcnI CCSGG 2 cut(s) 789, 1221
BcoDI GTCTC 2 cut(s) 718, 1119
BfaI CTAG 4 cut(s) 425, 725, 1266, 1520
BfrI CTTAAG 1 cut(s) 235
BfuI GTATCC 1 cut(s) 759
BglII AGATCT 1 cut(s) 498
BisI GCNGC 3 cut(s) 458, 572, 1587
BlnI CCTAGG 1 cut(s) 724
BlsI GCNGC 3 cut(s) 459, 573, 1588
Bme1390I CCNGG 7 cut(s) 260, 543, 789, 988, 1221, 1359, 1569
Bme18I GGWCC 5 cut(s) 99, 203, 728, 884, 940
BmeT110I CYCGRG 3 cut(s) 297, 1158, 1271
BmgT120I GGNCC 5 cut(s) 99, 203, 728, 884, 940
BmiI GGNNCC 5 cut(s) 101, 204, 697, 886, 1025
BmrFI CCNGG 7 cut(s) 260, 543, 789, 988, 1221, 1359, 1569
BmsI GCATC 2 cut(s) 253, 883
BpmI CTGGAG 1 cut(s) 1341
Bpu10I CCTNAGC 3 cut(s) 526, 849, 1452
Bpu14I TTCGAA 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 473
BpuMI CCSGG 2 cut(s) 789, 1221
BsaHI GRCGYC 1 cut(s) 711
BsaI GGTCTC 1 cut(s) 1119
BsaJI CCNNGG 5 cut(s) 258, 390, 691, 724, 943
BsaWI WCCGGW 2 cut(s) 857, 916
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 5 cut(s) 514, 692, 794, 872, 916
Bse118I RCCGGY 2 cut(s) 141, 446
Bse1I ACTGG 4 cut(s) 600, 763, 910, 1230
BseBI CCWGG 5 cut(s) 260, 543, 988, 1359, 1569
BseDI CCNNGG 5 cut(s) 258, 390, 691, 724, 943
BseGI GGATG 4 cut(s) 232, 268, 1121, 1151
BseLI CCNNNNNNNGG 5 cut(s) 514, 692, 794, 872, 916
BseMII CTCAG 6 cut(s) 41, 172, 729, 840, 1443, 1575
BseNI ACTGG 4 cut(s) 600, 763, 910, 1230
BseXI GCAGC 2 cut(s) 444, 583
BshFI GGCC 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 1357
BsiHKCI CYCGRG 3 cut(s) 297, 1158, 1271
BsiSI CCGG 6 cut(s) 142, 447, 789, 858, 917, 1220
BslFI GGGAC 5 cut(s) 520, 870, 1067, 1236, 1254
BslI CCNNNNNNNGG 5 cut(s) 514, 692, 794, 872, 916
BsmAI GTCTC 2 cut(s) 718, 1119
BsmBI CGTCTC 1 cut(s) 718
BsmFI GGGAC 5 cut(s) 520, 870, 1067, 1236, 1254
BsnI GGCC 1 cut(s) 141
Bso31I GGTCTC 1 cut(s) 1119
BsoBI CYCGRG 3 cut(s) 297, 1158, 1271
Bsp119I TTCGAA 1 cut(s) 19
Bsp1286I GDGCHC 1 cut(s) 1357
Bsp143I GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
Bsp19I CCATGG 2 cut(s) 390, 943
BspACI CCGC 4 cut(s) 308, 882, 1250, 1587
BspANI GGCC 1 cut(s) 141
BspCNI CTCAG 6 cut(s) 40, 171, 728, 841, 1444, 1574
BspLI GGNNCC 5 cut(s) 101, 204, 697, 886, 1025
BspPI GGATC 3 cut(s) 958, 1018, 1031
BspT104I TTCGAA 1 cut(s) 19
BspTI CTTAAG 1 cut(s) 235
BspTNI GGTCTC 1 cut(s) 1119
BsrFI RCCGGY 2 cut(s) 141, 446
BsrI ACTGG 4 cut(s) 600, 763, 910, 1230
BssAI RCCGGY 2 cut(s) 141, 446
BssECI CCNNGG 5 cut(s) 258, 390, 691, 724, 943
BssMI GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
BssNI GRCGYC 1 cut(s) 711
BssSI CACGAG 1 cut(s) 124
BssT1I CCWWGG 4 cut(s) 390, 691, 724, 943
Bst2BI CACGAG 1 cut(s) 124
Bst2UI CCWGG 5 cut(s) 260, 543, 988, 1359, 1569
BstACI GRCGYC 1 cut(s) 711
BstAFI CTTAAG 1 cut(s) 235
BstBI TTCGAA 1 cut(s) 19
BstC8I GCNNGC 4 cut(s) 143, 294, 1303, 1584
BstDEI CTNAG 8 cut(s) 27, 158, 526, 715, 849, 1452, 1561, 1590
BstDSI CCRYGG 2 cut(s) 390, 943
BstF5I GGATG 4 cut(s) 232, 268, 1121, 1151
BstHHI GCGC 1 cut(s) 60
BstKTI GATC 6 cut(s) 39, 501, 953, 1021, 1026, 1519
BstMAI GTCTC 2 cut(s) 718, 1119
BstMBI GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
BstMWI GCNNNNNNNGC 1 cut(s) 466
BstNI CCWGG 5 cut(s) 260, 543, 988, 1359, 1569
BstNSI RCATGY 5 cut(s) 296, 464, 826, 848, 1582
BstSCI CCNGG 7 cut(s) 258, 541, 787, 986, 1219, 1357, 1567
BstV1I GCAGC 2 cut(s) 444, 583
BstX2I RGATCY 2 cut(s) 498, 1023
BstYI RGATCY 2 cut(s) 498, 1023
BsuI GTATCC 1 cut(s) 759
BsuRI GGCC 1 cut(s) 141
BtgI CCRYGG 2 cut(s) 390, 943
BtsCI GGATG 4 cut(s) 232, 268, 1121, 1151
BtsIMutI CAGTG 2 cut(s) 593, 723
Cac8I GCNNGC 4 cut(s) 143, 294, 1303, 1584
CfoI GCGC 1 cut(s) 60
Cfr10I RCCGGY 2 cut(s) 141, 446
Cfr13I GGNCC 5 cut(s) 99, 203, 728, 884, 940
CseI GACGC 1 cut(s) 700
CsiI ACCWGGT 1 cut(s) 541
Csp6I GTAC 4 cut(s) 991, 1102, 1241, 1312
CviQI GTAC 4 cut(s) 991, 1102, 1241, 1312
DdeI CTNAG 8 cut(s) 27, 158, 526, 715, 849, 1452, 1561, 1590
DpnI GATC 6 cut(s) 38, 500, 952, 1020, 1025, 1518
DpnII GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
DraI TTTAAA 1 cut(s) 670
DrdI GACNNNNNNGTC 1 cut(s) 1061
DseDI GACNNNNNNGTC 1 cut(s) 1061
EaeI YGGCCR 1 cut(s) 139
Ecl136II GAGCTC 1 cut(s) 1355
Eco130I CCWWGG 4 cut(s) 390, 691, 724, 943
Eco24I GRGCYC 1 cut(s) 1357
Eco31I GGTCTC 1 cut(s) 1119
Eco47I GGWCC 5 cut(s) 99, 203, 728, 884, 940
Eco53kI GAGCTC 1 cut(s) 1355
Eco57I CTGAAG 2 cut(s) 131, 347
Eco88I CYCGRG 3 cut(s) 297, 1158, 1271
EcoICRI GAGCTC 1 cut(s) 1355
EcoO109I RGGNCCY 2 cut(s) 99, 203
EcoRI GAATTC 1 cut(s) 800
EcoRII CCWGG 5 cut(s) 258, 541, 986, 1357, 1567
EcoT14I CCWWGG 4 cut(s) 390, 691, 724, 943
EcoT38I GRGCYC 1 cut(s) 1357
ErhI CCWWGG 4 cut(s) 390, 691, 724, 943
Esp3I CGTCTC 1 cut(s) 718
FalI AAGNNNNNCTT 6 cut(s) 435, 467, 572, 604, 1370, 1402
FaqI GGGAC 5 cut(s) 520, 870, 1067, 1236, 1254
FauNDI CATATG 1 cut(s) 967
Fnu4HI GCNGC 3 cut(s) 458, 572, 1587
FokI GGATG 4 cut(s) 239, 275, 1108, 1138
FriOI GRGCYC 1 cut(s) 1357
Fsp4HI GCNGC 3 cut(s) 458, 572, 1587
FspBI CTAG 4 cut(s) 425, 725, 1266, 1520
GlaI GCGC 1 cut(s) 59
GluI GCNGC 3 cut(s) 458, 572, 1587
GsuI CTGGAG 1 cut(s) 1341
HaeIII GGCC 1 cut(s) 141
HapII CCGG 6 cut(s) 142, 447, 789, 858, 917, 1220
HgaI GACGC 1 cut(s) 700
HhaI GCGC 1 cut(s) 60
Hin1I GRCGYC 1 cut(s) 711
Hin6I GCGC 1 cut(s) 58
HinP1I GCGC 1 cut(s) 58
HincII GTYRAC 2 cut(s) 1131, 1558
HindII GTYRAC 2 cut(s) 1131, 1558
HindIII AAGCTT 4 cut(s) 109, 195, 664, 672
HpaII CCGG 6 cut(s) 142, 447, 789, 858, 917, 1220
Hpy166II GTNNAC 5 cut(s) 153, 646, 1131, 1416, 1558
Hpy188III TCNNGA 6 cut(s) 452, 1158, 1160, 1271, 1350, 1473
Hpy8I GTNNAC 5 cut(s) 153, 646, 1131, 1416, 1558
HpyAV CCTTC 4 cut(s) 36, 216, 762, 1473
HpyCH4IV ACGT 2 cut(s) 775, 1239
HpyCH4V TGCA 9 cut(s) 266, 279, 460, 1093, 1193, 1206, 1305, 1507, 1582
HpyF10VI GCNNNNNNNGC 1 cut(s) 466
HpyF3I CTNAG 8 cut(s) 27, 158, 526, 715, 849, 1452, 1561, 1590
HpySE526I ACGT 2 cut(s) 775, 1239
Hsp92I GRCGYC 1 cut(s) 711
HspAI GCGC 1 cut(s) 58
KroI GCCGGC 1 cut(s) 141
KroNI GCCGGC 1 cut(s) 143
Kzo9I GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
LmnI GCTCC 5 cut(s) 352, 901, 1352, 1360, 1433
Lsp1109I GCAGC 2 cut(s) 444, 583
LweI GCATC 2 cut(s) 253, 883
MabI ACCWGGT 1 cut(s) 541
MaeI CTAG 4 cut(s) 425, 725, 1266, 1520
MaeII ACGT 2 cut(s) 775, 1239
MaeIII GTNAC 5 cut(s) 340, 912, 960, 1052, 1063
MalI GATC 6 cut(s) 38, 500, 952, 1020, 1025, 1518
MboI GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
MboII GAAGA 8 cut(s) 46, 508, 925, 970, 1032, 1393, 1435, 1544
MfeI CAATTG 1 cut(s) 303
MflI RGATCY 2 cut(s) 498, 1023
MhlI GDGCHC 1 cut(s) 1357
MlyI GAGTC 5 cut(s) 542, 625, 914, 968, 1283
MmeI TCCRAC 3 cut(s) 229, 292, 1159
MnlI CCTC 5 cut(s) 90, 844, 1095, 1165, 1355
MroNI GCCGGC 1 cut(s) 141
MroXI GAANNNNTTC 2 cut(s) 180, 1548
MseI TTAA 6 cut(s) 192, 236, 621, 669, 837, 1491
MspCI CTTAAG 1 cut(s) 235
MspI CCGG 6 cut(s) 142, 447, 789, 858, 917, 1220
MspR9I CCNGG 7 cut(s) 260, 543, 789, 988, 1221, 1359, 1569
MunI CAATTG 1 cut(s) 303
MvaI CCWGG 5 cut(s) 260, 543, 988, 1359, 1569
MwoI GCNNNNNNNGC 1 cut(s) 466
NaeI GCCGGC 1 cut(s) 143
NciI CCSGG 2 cut(s) 789, 1221
NcoI CCATGG 2 cut(s) 390, 943
NdeI CATATG 1 cut(s) 967
NdeII GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
NgoMIV GCCGGC 1 cut(s) 141
NlaIV GGNNCC 5 cut(s) 101, 204, 697, 886, 1025
NmuCI GTSAC 5 cut(s) 340, 912, 960, 1052, 1063
NspI RCATGY 5 cut(s) 296, 464, 826, 848, 1582
NspV TTCGAA 1 cut(s) 19
PaeI GCATGC 1 cut(s) 296
PaeR7I CTCGAG 1 cut(s) 1158
PdiI GCCGGC 1 cut(s) 143
PdmI GAANNNNTTC 2 cut(s) 180, 1548
PfeI GAWTC 6 cut(s) 176, 637, 1256, 1476, 1544, 1572
PfoI TCCNGGA 1 cut(s) 1357
PkrI GCNGC 3 cut(s) 459, 573, 1588
PleI GAGTC 5 cut(s) 541, 625, 914, 967, 1282
PpsI GAGTC 5 cut(s) 541, 625, 914, 967, 1282
PpuMI RGGWCCY 2 cut(s) 99, 203
PsiI TTATAA 1 cut(s) 1146
Psp124BI GAGCTC 1 cut(s) 1357
Psp5II RGGWCCY 2 cut(s) 99, 203
Psp6I CCWGG 5 cut(s) 258, 541, 986, 1357, 1567
PspGI CCWGG 5 cut(s) 258, 541, 986, 1357, 1567
PspN4I GGNNCC 5 cut(s) 101, 204, 697, 886, 1025
PspPI GGNCC 5 cut(s) 99, 203, 728, 884, 940
PspPPI RGGWCCY 2 cut(s) 99, 203
PsuI RGATCY 2 cut(s) 498, 1023
RsaI GTAC 4 cut(s) 992, 1103, 1242, 1313
RsaNI GTAC 4 cut(s) 991, 1102, 1241, 1312
SacI GAGCTC 1 cut(s) 1357
SaqAI TTAA 6 cut(s) 192, 236, 621, 669, 837, 1491
SatI GCNGC 3 cut(s) 458, 572, 1587
Sau3AI GATC 6 cut(s) 36, 498, 950, 1018, 1023, 1516
Sau96I GGNCC 5 cut(s) 99, 203, 728, 884, 940
SchI GAGTC 5 cut(s) 542, 625, 914, 968, 1283
ScrFI CCNGG 7 cut(s) 260, 543, 789, 988, 1221, 1359, 1569
SduI GDGCHC 1 cut(s) 1357
SexAI ACCWGGT 1 cut(s) 541
SfaNI GCATC 2 cut(s) 253, 883
Sfr274I CTCGAG 1 cut(s) 1158
SfuI TTCGAA 1 cut(s) 19
SinI GGWCC 5 cut(s) 99, 203, 728, 884, 940
SlaI CTCGAG 1 cut(s) 1158
SmlI CTYRAG 3 cut(s) 235, 452, 1158
SmoI CTYRAG 3 cut(s) 235, 452, 1158
SphI GCATGC 1 cut(s) 296
SsiI CCGC 4 cut(s) 308, 882, 1250, 1587
SspMI CTAG 4 cut(s) 425, 725, 1266, 1520
SstI GAGCTC 1 cut(s) 1357
StyD4I CCNGG 7 cut(s) 258, 541, 787, 986, 1219, 1357, 1567
StyI CCWWGG 4 cut(s) 390, 691, 724, 943
TaiI ACGT 2 cut(s) 778, 1242
TaqI TCGA 3 cut(s) 19, 184, 1159
TauI GCSGC 1 cut(s) 1589
TfiI GAWTC 6 cut(s) 176, 637, 1256, 1476, 1544, 1572
Tru1I TTAA 6 cut(s) 192, 236, 621, 669, 837, 1491
Tru9I TTAA 6 cut(s) 192, 236, 621, 669, 837, 1491
TscAI CASTG 2 cut(s) 600, 723
TseFI GTSAC 5 cut(s) 340, 912, 960, 1052, 1063
TseI GCWGC 2 cut(s) 457, 571
Tsp45I GTSAC 5 cut(s) 340, 912, 960, 1052, 1063
TspDTI ATGAA 4 cut(s) 831, 1185, 1455, 1541
TspGWI ACGGA 1 cut(s) 1329
TspRI CASTG 2 cut(s) 600, 723
Vha464I CTTAAG 1 cut(s) 235
VpaK11BI GGWCC 5 cut(s) 99, 203, 728, 884, 940
XapI RAATTY 3 cut(s) 783, 800, 1323
XceI RCATGY 5 cut(s) 296, 464, 826, 848, 1582
XhoI CTCGAG 1 cut(s) 1158
XmaJI CCTAGG 1 cut(s) 724
XmnI GAANNNNTTC 2 cut(s) 180, 1548
XspI CTAG 4 cut(s) 425, 725, 1266, 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.