Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0012518

Physical Location & Seq

Genomic Coordinates Forward (+)

58657449 .. 58659097

Gene Structure 1649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00378140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGCCGGAGAGGAATGTGGTTATGTATAATACACTTATTACTGGGCTTTTGAGGTGTGGATTGATCGGAGATGCTGAGTGTTTGTTTGGTGACATGCCTGAAAAAGACTCCATTTCGTGGACCACGATGATTACCGGACTCACGAGAAATGGTGCAGGCAGAAAAGCACTTGATAAGTTTAGAGAAATGAGGTCGGAAGGTTTGGGGATGGATCAATATACGTTTGGTAGCACATTGACTGCATGTGGGGGACTGTTGGCTCTGCAGGAGGGCAAGCAAGTTCATGCTTATATTGTTAGGACTGATTTTATGGATAATATCTTCATCAGTAGCGCTCTTGTTGACTTGTATTGTAAGTGTGGAAGCATAAAAGCTGCAGAGACAGTTTTCAGGAGAATGAGCTGCAAGAATGTAGTATCGTGGACTGCCTTGCTTGTTGGTTATGGCCAGAATGGGTACAGTGAAGAAGCTAGAAGTGGGGTTGAACCAGATGAATATACCCTGGGAAGCTTAATTAGCTCGTGTGCTAACTTAGCAAGCTTAGAAGAAGGTGCCCAGTTCCATGGTCAAGCTCTAGTTTCAGGCCTGATTTCTTTCACTACAGTTTCAAATGCACTCGTTACCTTATACGGTAAGTGTGGAAGTATCGAAGACTCCCATAGGCTGTTTGATGAGATGAACATCCGGGATGAAGTCTCCTGGTCAGCATTGGTTTCAGGGTATGCCCGTTTTGGAAAAGCCAATGAGACGATTGCTTTGTTTGAGATGATGTTGGCCCAGGGTTTAAAACCTGATGGAGTTACTTTCATAGGGGTTCTTTCAGCCTGTAGTAGAGCAGGACTAGTAGAGAGAGGACATCAGTATTTTGAATCAATGACTAAAGTACATGGAATTACACCGATTCTTGATCACTACACTTGCATCATTGACCTGCTCAGCCGAGCAGGAAGATTAGAAGAAGCACGAAGCTTCATTAATAAGATGCCTATGCGTCCTGATGCAATTGGTTGGGCCACCTTGCTAAGCTCATGTAGATTTCGCTCTAATATGGAGATTGGAAAATGGGCAGCTAAGTCTCTTCGAGAAATAGATCCCCAGAATCCTGCAAGCTATATCTTGCTCTCAAGCATCTATGCTGCTAAAGGAAAGTGGGATGAAGTGTCTAAATTGAGGACAGGAATGAGAGATAAGGGGATCAGAAAGGAACCAGGATGCAGTTGGATTAAATATAAGAGCAGAGTACACATCTTTTCAGCAGATGACCAGTCAAGTCCATTTTCAGATCAGATATACGCTGAGCTGGAGAAACTATATTCTAAAATGATAGAAGAAGGATATGAGCCAGATGTGAGTTCAGTTCTCCATGATGTTGACGAATCACAAAAGATGAAGATGCTTAATTACCACAGTGAGAGGCTTGCAATTGCCTTTGGATTGATATTTATTCCTTCTGGCCTTCCTATTCGAGTTGTTAAAAACCTTAGAGTATGTGGGGACTGCCACAATGCCACTAATATATATTTCCAAGATCACCAAGAGAGAGATACTTGTAAGAGATGCTGTCCGCTACCACTTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

526

Amino Acids

58.52

Weight (kDa)

6.3

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	4 - 35	9.5e-06	PPR repeat family
PPR_2	PF13041	36 - 82	7.3e-09	PPR repeat family
PPR	PF01535	38 - 68	4.8e-06	PPR repeat
PPR_2	PF13041	230 - 277	1.7e-07	PPR repeat family
E_motif	PF20431	348 - 409	6.8e-23	E motif
DYW_deaminase	PF14432	445 - 506	1.2e-21	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012518)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68930 AT1G68930
fragaria_vesca	FvH4_4g28920
malus_domestica	MD13G1054800.v1.1 MD16G1053700.v1.1
prunus_persica	Prupe.1G297100_v2.0.a1
pyrus_communis	pycom13g04860
rosa_chinensis	RchiOBHm_Chr4g0437061
rosa_laevigata	RLG00000006472
rosa_multiflora	Rmu_co8326179.1_g000001 Rmu_sc0008325.1_g000001 Rmu_sc0028518.1_g000001
rosa_roxburghii	Rroxscaffold_5G00378140
rosa_rugosa	Rorug04G0298000
rosa_samantha	Rh4AG352500 Rh4BG361800 Rh4CG376100 Rh4DG356000
rosa_wichuraiana	Rw4G030860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	939
AccB1I	GGYRCC	1 cut(s)	551
AccB7I	CCANNNNNTGG	1 cut(s)	117
AciI	CCGC	1 cut(s)	1565
AclWI	GGATC	3 cut(s)	219, 1085, 1202
AcoI	YGGCCR	1 cut(s)	445
AfaI	GTAC	3 cut(s)	458, 885, 1242
AfeI	AGCGCT	1 cut(s)	334
AfiI	CCNNNNNNNGG	1 cut(s)	117
AgsI	TTSAA	3 cut(s)	485, 609, 869
AhlI	ACTAGT	1 cut(s)	841
AjnI	CCWGG	4 cut(s)	501, 698, 777, 1207
Alw26I	GTCTC	4 cut(s)	374, 700, 740, 1080
AlwI	GGATC	3 cut(s)	219, 1085, 1202
Aor51HI	AGCGCT	1 cut(s)	334
AoxI	GGCC	5 cut(s)	445, 583, 774, 1011, 1453
ApeKI	GCWGC	4 cut(s)	374, 402, 1067, 1136
ArsI	GACNNNNNNTTYG	2 cut(s)	739, 771
AseI	ATTAAT	1 cut(s)	975
AspLEI	GCGC	1 cut(s)	335
AspS9I	GGNCC	3 cut(s)	120, 775, 1011
AsuC2I	CCSGG	1 cut(s)	686
AsuHPI	GGTGA	2 cut(s)	101, 1523
AvaII	GGWCC	1 cut(s)	120
BaeGI	GKGCMC	1 cut(s)	556
BalI	TGGCCA	1 cut(s)	447
BanI	GGYRCC	1 cut(s)	551
BauI	CACGAG	2 cut(s)	142, 520
BbsI	GAAGAC	1 cut(s)	657
BbvI	GCAGC	4 cut(s)	361, 389, 1079, 1123
BccI	CCATC	2 cut(s)	202, 788
BciT130I	CCWGG	4 cut(s)	503, 700, 779, 1209
BclI	TGATCA	1 cut(s)	907
BcnI	CCSGG	1 cut(s)	686
BcoDI	GTCTC	4 cut(s)	374, 700, 740, 1080
BcuI	ACTAGT	1 cut(s)	841
BfaI	CTAG	3 cut(s)	471, 575, 842
BfmI	CTRYAG	4 cut(s)	263, 375, 600, 826
BfoI	RGCGCY	1 cut(s)	336
BfuAI	ACCTGC	1 cut(s)	939
BisI	GCNGC	4 cut(s)	375, 403, 1068, 1137
BlpI	GCTNAGC	3 cut(s)	935, 1022, 1296
BlsI	GCNGC	4 cut(s)	376, 404, 1069, 1138
Bme1390I	CCNGG	5 cut(s)	503, 686, 700, 779, 1209
Bme18I	GGWCC	1 cut(s)	120
BmgT120I	GGNCC	3 cut(s)	120, 775, 1011
BmiI	GGNNCC	2 cut(s)	553, 1206
BmrFI	CCNGG	5 cut(s)	503, 686, 700, 779, 1209
BmrI	ACTGGG	2 cut(s)	51, 550
BmsI	GCATC	8 cut(s)	61, 930, 972, 988, 1137, 1202, 1383, 1547
BmuI	ACTGGG	2 cut(s)	51, 550
BpiI	GAAGAC	1 cut(s)	657
BpmI	CTGGAG	1 cut(s)	1322
Bpu1102I	GCTNAGC	3 cut(s)	935, 1022, 1296
BpuEI	CTTGAG	1 cut(s)	1108
BpuMI	CCSGG	1 cut(s)	686
BsaBI	GATNNNNATC	1 cut(s)	680
BsaJI	CCNNGG	5 cut(s)	501, 502, 562, 777, 778
BsaWI	WCCGGW	1 cut(s)	134
Bsc4I	CCNNNNNNNGG	1 cut(s)	117
Bse1I	ACTGG	3 cut(s)	46, 556, 1264
Bse8I	GATNNNNATC	1 cut(s)	680
BseBI	CCWGG	4 cut(s)	503, 700, 779, 1209
BseDI	CCNNGG	5 cut(s)	501, 502, 562, 777, 778
BseGI	GGATG	5 cut(s)	213, 681, 694, 1159, 1217
BseJI	GATNNNNATC	1 cut(s)	680
BseLI	CCNNNNNNNGG	1 cut(s)	117
BseMII	CTCAG	3 cut(s)	66, 949, 1287
BseNI	ACTGG	3 cut(s)	46, 556, 1264
BseSI	GKGCMC	1 cut(s)	556
BseXI	GCAGC	4 cut(s)	361, 389, 1079, 1123
BsgI	GTGCAG	1 cut(s)	174
BshFI	GGCC	5 cut(s)	447, 585, 776, 1013, 1455
BshNI	GGYRCC	1 cut(s)	551
BsiSI	CCGG	3 cut(s)	5, 135, 685
BslFI	GGGAC	2 cut(s)	264, 1508
BslI	CCNNNNNNNGG	1 cut(s)	117
BsmAI	GTCTC	4 cut(s)	374, 700, 740, 1080
BsmBI	CGTCTC	1 cut(s)	740
BsmFI	GGGAC	2 cut(s)	264, 1508
BsnI	GGCC	5 cut(s)	447, 585, 776, 1013, 1455
Bsp1286I	GDGCHC	1 cut(s)	556
Bsp143I	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
Bsp1720I	GCTNAGC	3 cut(s)	935, 1022, 1296
Bsp19I	CCATGG	1 cut(s)	562
BspACI	CCGC	1 cut(s)	1565
BspANI	GGCC	5 cut(s)	447, 585, 776, 1013, 1455
BspCNI	CTCAG	3 cut(s)	67, 948, 1288
BspLI	GGNNCC	2 cut(s)	553, 1206
BspMAI	CTGCAG	2 cut(s)	267, 379
BspMI	ACCTGC	1 cut(s)	939
BspPI	GGATC	3 cut(s)	219, 1085, 1202
BspT107I	GGYRCC	1 cut(s)	551
BsrI	ACTGG	3 cut(s)	46, 556, 1264
BssECI	CCNNGG	5 cut(s)	501, 502, 562, 777, 778
BssMI	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
BssSI	CACGAG	2 cut(s)	142, 520
BssT1I	CCWWGG	1 cut(s)	562
Bst2BI	CACGAG	2 cut(s)	142, 520
Bst2UI	CCWGG	4 cut(s)	503, 700, 779, 1209
Bst4CI	ACNGT	6 cut(s)	255, 385, 461, 604, 632, 1409
Bst6I	CTCTTC	1 cut(s)	1083
BstC8I	GCNNGC	5 cut(s)	157, 275, 538, 1108, 1419
BstDEI	CTNAG	8 cut(s)	75, 532, 541, 935, 1022, 1071, 1296, 1481
BstDSI	CCRYGG	1 cut(s)	562
BstF5I	GGATG	5 cut(s)	213, 681, 694, 1159, 1217
BstH2I	RGCGCY	1 cut(s)	336
BstHHI	GCGC	1 cut(s)	335
BstKTI	GATC	7 cut(s)	66, 214, 910, 1093, 1197, 1285, 1531
BstMAI	GTCTC	4 cut(s)	374, 700, 740, 1080
BstMBI	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
BstMWI	GCNNNNNNNGC	2 cut(s)	516, 533
BstNI	CCWGG	4 cut(s)	503, 700, 779, 1209
BstNSI	RCATGY	2 cut(s)	97, 246
BstSCI	CCNGG	5 cut(s)	501, 684, 698, 777, 1207
BstSFI	CTRYAG	4 cut(s)	263, 375, 600, 826
BstSLI	GKGCMC	1 cut(s)	556
BstV1I	GCAGC	4 cut(s)	361, 389, 1079, 1123
BstV2I	GAAGAC	1 cut(s)	657
BstX2I	RGATCY	1 cut(s)	1090
BstXI	CCANNNNNNTGG	1 cut(s)	563
BstYI	RGATCY	1 cut(s)	1090
BsuRI	GGCC	5 cut(s)	447, 585, 776, 1013, 1455
BtgI	CCRYGG	1 cut(s)	562
BtsCI	GGATG	5 cut(s)	213, 681, 694, 1159, 1217
BtsIMutI	CAGTG	2 cut(s)	466, 1414
BveI	ACCTGC	1 cut(s)	939
Cac8I	GCNNGC	5 cut(s)	157, 275, 538, 1108, 1419
CfoI	GCGC	1 cut(s)	335
Cfr13I	GGNCC	3 cut(s)	120, 775, 1011
CseI	GACGC	1 cut(s)	980
Csp6I	GTAC	3 cut(s)	457, 884, 1241
CviAII	CATG	7 cut(s)	94, 243, 284, 563, 887, 1029, 1364
CviQI	GTAC	3 cut(s)	457, 884, 1241
DdeI	CTNAG	8 cut(s)	75, 532, 541, 935, 1022, 1071, 1296, 1481
DpnI	GATC	7 cut(s)	65, 213, 909, 1092, 1196, 1284, 1530
DpnII	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
DraI	TTTAAA	1 cut(s)	786
EaeI	YGGCCR	1 cut(s)	445
Eam1104I	CTCTTC	1 cut(s)	1083
EarI	CTCTTC	1 cut(s)	1083
Eco130I	CCWWGG	1 cut(s)	562
Eco147I	AGGCCT	1 cut(s)	585
Eco47I	GGWCC	1 cut(s)	120
Eco47III	AGCGCT	1 cut(s)	334
EcoRII	CCWGG	4 cut(s)	501, 698, 777, 1207
EcoT14I	CCWWGG	1 cut(s)	562
ErhI	CCWWGG	1 cut(s)	562
Esp3I	CGTCTC	1 cut(s)	740
FaeI	CATG	7 cut(s)	97, 246, 287, 566, 890, 1032, 1367
FaqI	GGGAC	2 cut(s)	264, 1508
FatI	CATG	7 cut(s)	93, 242, 283, 562, 886, 1028, 1363
FbaI	TGATCA	1 cut(s)	907
Fnu4HI	GCNGC	4 cut(s)	375, 403, 1068, 1137
FokI	GGATG	5 cut(s)	220, 668, 701, 1166, 1224
Fsp4HI	GCNGC	4 cut(s)	375, 403, 1068, 1137
FspBI	CTAG	3 cut(s)	471, 575, 842
GlaI	GCGC	1 cut(s)	334
GluI	GCNGC	4 cut(s)	375, 403, 1068, 1137
GsuI	CTGGAG	1 cut(s)	1322
HaeII	RGCGCY	1 cut(s)	336
HaeIII	GGCC	5 cut(s)	447, 585, 776, 1013, 1455
HapII	CCGG	3 cut(s)	5, 135, 685
HgaI	GACGC	1 cut(s)	980
HhaI	GCGC	1 cut(s)	335
Hin1II	CATG	7 cut(s)	97, 246, 287, 566, 890, 1032, 1367
Hin6I	GCGC	1 cut(s)	333
HinP1I	GCGC	1 cut(s)	333
HincII	GTYRAC	2 cut(s)	343, 1372
HindII	GTYRAC	2 cut(s)	343, 1372
HindIII	AAGCTT	3 cut(s)	508, 538, 967
HinfI	GANTC	7 cut(s)	107, 138, 653, 869, 901, 1099, 1376
HpaII	CCGG	3 cut(s)	5, 135, 685
HphI	GGTGA	2 cut(s)	101, 1523
Hpy166II	GTNNAC	5 cut(s)	120, 343, 423, 1243, 1372
Hpy188I	TCNGA	5 cut(s)	68, 196, 1199, 1282, 1287
Hpy188III	TCNNGA	5 cut(s)	142, 391, 905, 995, 1082
Hpy8I	GTNNAC	5 cut(s)	120, 343, 423, 1243, 1372
HpyAV	CCTTC	5 cut(s)	191, 542, 1325, 1458, 1466
HpyCH4III	ACNGT	6 cut(s)	255, 385, 461, 604, 632, 1409
HpyCH4IV	ACGT	1 cut(s)	221
HpyF10VI	GCNNNNNNNGC	2 cut(s)	516, 533
HpyF3I	CTNAG	8 cut(s)	75, 532, 541, 935, 1022, 1071, 1296, 1481
HpySE526I	ACGT	1 cut(s)	221
Hsp92II	CATG	7 cut(s)	97, 246, 287, 566, 890, 1032, 1367
HspAI	GCGC	1 cut(s)	333
Ksp22I	TGATCA	1 cut(s)	907
Kzo9I	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
Lsp1109I	GCAGC	4 cut(s)	361, 389, 1079, 1123
LweI	GCATC	8 cut(s)	61, 930, 972, 988, 1137, 1202, 1383, 1547
MaeI	CTAG	3 cut(s)	471, 575, 842
MaeII	ACGT	1 cut(s)	221
MaeIII	GTNAC	3 cut(s)	89, 619, 799
MalI	GATC	7 cut(s)	65, 213, 909, 1092, 1196, 1284, 1530
MboI	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
MboII	GAAGA	9 cut(s)	313, 476, 557, 662, 960, 968, 1070, 1340, 1402
MfeI	CAATTG	2 cut(s)	1002, 1422
MflI	RGATCY	1 cut(s)	1090
MhlI	GDGCHC	1 cut(s)	556
MlsI	TGGCCA	1 cut(s)	447
MluCI	AATT	6 cut(s)	513, 891, 1002, 1166, 1399, 1422
MluNI	TGGCCA	1 cut(s)	447
MlyI	GAGTC	3 cut(s)	101, 132, 647
MmeI	TCCRAC	2 cut(s)	174, 1199
MnlI	CCTC	7 cut(s)	3, 45, 183, 262, 845, 1164, 1407
Mox20I	TGGCCA	1 cut(s)	447
MscI	TGGCCA	1 cut(s)	447
MseI	TTAA	7 cut(s)	512, 785, 975, 1224, 1398, 1473, 1579
Msp20I	TGGCCA	1 cut(s)	447
MspI	CCGG	3 cut(s)	5, 135, 685
MspR9I	CCNGG	5 cut(s)	503, 686, 700, 779, 1209
MunI	CAATTG	2 cut(s)	1002, 1422
MvaI	CCWGG	4 cut(s)	503, 700, 779, 1209
MwoI	GCNNNNNNNGC	2 cut(s)	516, 533
NciI	CCSGG	1 cut(s)	686
NcoI	CCATGG	1 cut(s)	562
NdeII	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
NlaIII	CATG	7 cut(s)	97, 246, 287, 566, 890, 1032, 1367
NlaIV	GGNNCC	2 cut(s)	553, 1206
NmeAIII	GCCGAG	1 cut(s)	965
NmuCI	GTSAC	1 cut(s)	89
NspI	RCATGY	2 cut(s)	97, 246
PasI	CCCWGGG	2 cut(s)	502, 778
PceI	AGGCCT	1 cut(s)	585
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PfeI	GAWTC	4 cut(s)	869, 901, 1099, 1376
PflMI	CCANNNNNTGG	1 cut(s)	117
PfoI	TCCNGGA	1 cut(s)	684
PkrI	GCNGC	4 cut(s)	376, 404, 1069, 1138
PleI	GAGTC	3 cut(s)	101, 132, 647
PpsI	GAGTC	3 cut(s)	101, 132, 647
PshBI	ATTAAT	1 cut(s)	975
Psp6I	CCWGG	4 cut(s)	501, 698, 777, 1207
PspGI	CCWGG	4 cut(s)	501, 698, 777, 1207
PspN4I	GGNNCC	2 cut(s)	553, 1206
PspPI	GGNCC	3 cut(s)	120, 775, 1011
PstI	CTGCAG	2 cut(s)	267, 379
PsuI	RGATCY	1 cut(s)	1090
RsaI	GTAC	3 cut(s)	458, 885, 1242
RsaNI	GTAC	3 cut(s)	457, 884, 1241
SaqAI	TTAA	7 cut(s)	512, 785, 975, 1224, 1398, 1473, 1579
SatI	GCNGC	4 cut(s)	375, 403, 1068, 1137
Sau3AI	GATC	7 cut(s)	63, 211, 907, 1090, 1194, 1282, 1528
Sau96I	GGNCC	3 cut(s)	120, 775, 1011
SchI	GAGTC	3 cut(s)	101, 132, 647
ScrFI	CCNGG	5 cut(s)	503, 686, 700, 779, 1209
SduI	GDGCHC	1 cut(s)	556
SfaNI	GCATC	8 cut(s)	61, 930, 972, 988, 1137, 1202, 1383, 1547
SfcI	CTRYAG	4 cut(s)	263, 375, 600, 826
SinI	GGWCC	1 cut(s)	120
SmlI	CTYRAG	1 cut(s)	1123
SmoI	CTYRAG	1 cut(s)	1123
SpeI	ACTAGT	1 cut(s)	841
Sse9I	AATT	6 cut(s)	513, 891, 1002, 1166, 1399, 1422
SseBI	AGGCCT	1 cut(s)	585
SsiI	CCGC	1 cut(s)	1565
SspMI	CTAG	3 cut(s)	471, 575, 842
StuI	AGGCCT	1 cut(s)	585
StyD4I	CCNGG	5 cut(s)	501, 684, 698, 777, 1207
StyI	CCWWGG	1 cut(s)	562
TaaI	ACNGT	6 cut(s)	255, 385, 461, 604, 632, 1409
TaiI	ACGT	1 cut(s)	224
TaqI	TCGA	3 cut(s)	648, 1081, 1465
TasI	AATT	6 cut(s)	513, 891, 1002, 1166, 1399, 1422
TatI	WGTACW	2 cut(s)	883, 1240
TfiI	GAWTC	4 cut(s)	869, 901, 1099, 1376
Tru1I	TTAA	7 cut(s)	512, 785, 975, 1224, 1398, 1473, 1579
Tru9I	TTAA	7 cut(s)	512, 785, 975, 1224, 1398, 1473, 1579
TscAI	CASTG	2 cut(s)	466, 1414
TseFI	GTSAC	1 cut(s)	89
TseI	GCWGC	4 cut(s)	374, 402, 1067, 1136
Tsp45I	GTSAC	1 cut(s)	89
TspDTI	ATGAA	9 cut(s)	272, 313, 507, 692, 705, 796, 961, 1170, 1403
TspRI	CASTG	2 cut(s)	466, 1414
Van91I	CCANNNNNTGG	1 cut(s)	117
VpaK11BI	GGWCC	1 cut(s)	120
VspI	ATTAAT	1 cut(s)	975
XceI	RCATGY	2 cut(s)	97, 246
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1215
XspI	CTAG	3 cut(s)	471, 575, 842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.