ER membrane protein complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g03340 |
| rosa_chinensis | RchiOBHm_Chr5g0051541 RchiOBHm_Chr6g0244381 RchiOBHm_Chr7g0229041 |
| rosa_laevigata | RLG00000003551 RLG00000007409 |
| rosa_multiflora | Rmu_co8186706.1_g000001 Rmu_co8442279.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00158180 |
| rosa_rugosa | Rorug05G0508200 |
| rosa_samantha | Rh6AG023300 Rh7DG291700 |
| rosa_wichuraiana | Rw2G024010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 148 |
| AciI | CCGC | 1 cut(s) | 146 |
| AclWI | GGATC | 1 cut(s) | 246 |
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AluBI | AGCT | 2 cut(s) | 181, 223 |
| AluI | AGCT | 2 cut(s) | 181, 223 |
| AlwI | GGATC | 1 cut(s) | 246 |
| AoxI | GGCC | 1 cut(s) | 130 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 62 |
| AspS9I | GGNCC | 1 cut(s) | 169 |
| AsuC2I | CCSGG | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 1 cut(s) | 40 |
| AvaII | GGWCC | 1 cut(s) | 169 |
| BalI | TGGCCA | 1 cut(s) | 132 |
| BamHI | GGATCC | 1 cut(s) | 251 |
| BauI | CACGAG | 1 cut(s) | 108 |
| BcnI | CCSGG | 1 cut(s) | 13 |
| BfaI | CTAG | 2 cut(s) | 224, 256 |
| Bme1390I | CCNGG | 1 cut(s) | 13 |
| Bme18I | GGWCC | 1 cut(s) | 169 |
| BmgT120I | GGNCC | 1 cut(s) | 169 |
| BmiI | GGNNCC | 2 cut(s) | 91, 253 |
| BmrFI | CCNGG | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 1 cut(s) | 53 |
| BpuMI | CCSGG | 1 cut(s) | 13 |
| BsaBI | GATNNNNATC | 1 cut(s) | 42 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| Bse8I | GATNNNNATC | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseJI | GATNNNNATC | 1 cut(s) | 42 |
| Bsh1236I | CGCG | 1 cut(s) | 148 |
| BshFI | GGCC | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 13 |
| BsnI | GGCC | 1 cut(s) | 132 |
| Bsp143I | GATC | 2 cut(s) | 37, 251 |
| Bsp19I | CCATGG | 1 cut(s) | 133 |
| BspACI | CCGC | 1 cut(s) | 146 |
| BspANI | GGCC | 1 cut(s) | 132 |
| BspFNI | CGCG | 1 cut(s) | 148 |
| BspLI | GGNNCC | 2 cut(s) | 91, 253 |
| BspPI | GGATC | 1 cut(s) | 246 |
| BspQI | GCTCTTC | 1 cut(s) | 93 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 2 cut(s) | 37, 251 |
| BssSI | CACGAG | 1 cut(s) | 108 |
| BssT1I | CCWWGG | 1 cut(s) | 133 |
| Bst2BI | CACGAG | 1 cut(s) | 108 |
| Bst6I | CTCTTC | 1 cut(s) | 93 |
| BstDSI | CCRYGG | 1 cut(s) | 133 |
| BstFNI | CGCG | 1 cut(s) | 148 |
| BstKTI | GATC | 2 cut(s) | 40, 254 |
| BstMBI | GATC | 2 cut(s) | 37, 251 |
| BstSCI | CCNGG | 1 cut(s) | 11 |
| BstUI | CGCG | 1 cut(s) | 148 |
| BstX2I | RGATCY | 1 cut(s) | 251 |
| BstYI | RGATCY | 1 cut(s) | 251 |
| BsuRI | GGCC | 1 cut(s) | 132 |
| BtgI | CCRYGG | 1 cut(s) | 133 |
| BtgZI | GCGATG | 1 cut(s) | 245 |
| Cfr13I | GGNCC | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 3 cut(s) | 132, 181, 223 |
| CviKI_1 | RGCY | 3 cut(s) | 132, 181, 223 |
| DpnI | GATC | 2 cut(s) | 39, 253 |
| DpnII | GATC | 2 cut(s) | 37, 251 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 93 |
| EarI | CTCTTC | 1 cut(s) | 93 |
| Eco130I | CCWWGG | 1 cut(s) | 133 |
| Eco47I | GGWCC | 1 cut(s) | 169 |
| EcoO109I | RGGNCCY | 1 cut(s) | 169 |
| EcoT14I | CCWWGG | 1 cut(s) | 133 |
| ErhI | CCWWGG | 1 cut(s) | 133 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 2 cut(s) | 23, 135 |
| FatI | CATG | 1 cut(s) | 133 |
| FspBI | CTAG | 2 cut(s) | 224, 256 |
| HaeIII | GGCC | 1 cut(s) | 132 |
| HapII | CCGG | 1 cut(s) | 13 |
| Hin1II | CATG | 1 cut(s) | 137 |
| HincII | GTYRAC | 1 cut(s) | 217 |
| HindII | GTYRAC | 1 cut(s) | 217 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HinfI | GANTC | 1 cut(s) | 51 |
| HpaII | CCGG | 1 cut(s) | 13 |
| HphI | GGTGA | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 4 cut(s) | 55, 108, 155, 200 |
| Hpy8I | GTNNAC | 1 cut(s) | 217 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 1 cut(s) | 164 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| Kzo9I | GATC | 2 cut(s) | 37, 251 |
| LguI | GCTCTTC | 1 cut(s) | 93 |
| LpnPI | CCDG | 1 cut(s) | 26 |
| MaeI | CTAG | 2 cut(s) | 224, 256 |
| MalI | GATC | 2 cut(s) | 39, 253 |
| MboI | GATC | 2 cut(s) | 37, 251 |
| MboII | GAAGA | 2 cut(s) | 70, 110 |
| MflI | RGATCY | 1 cut(s) | 251 |
| MlsI | TGGCCA | 1 cut(s) | 132 |
| MluNI | TGGCCA | 1 cut(s) | 132 |
| MnlI | CCTC | 8 cut(s) | 24, 77, 104, 104, 115, 182, 220, 235 |
| Mox20I | TGGCCA | 1 cut(s) | 132 |
| MroXI | GAANNNNTTC | 1 cut(s) | 62 |
| MscI | TGGCCA | 1 cut(s) | 132 |
| Msp20I | TGGCCA | 1 cut(s) | 132 |
| MspI | CCGG | 1 cut(s) | 13 |
| MspR9I | CCNGG | 1 cut(s) | 13 |
| MvnI | CGCG | 1 cut(s) | 148 |
| NciI | CCSGG | 1 cut(s) | 13 |
| NcoI | CCATGG | 1 cut(s) | 133 |
| NdeII | GATC | 2 cut(s) | 37, 251 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NlaIV | GGNNCC | 2 cut(s) | 91, 253 |
| PciSI | GCTCTTC | 1 cut(s) | 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 62 |
| PfeI | GAWTC | 1 cut(s) | 51 |
| PpuMI | RGGWCCY | 1 cut(s) | 169 |
| Psp5II | RGGWCCY | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 2 cut(s) | 91, 253 |
| PspPI | GGNCC | 1 cut(s) | 169 |
| PspPPI | RGGWCCY | 1 cut(s) | 169 |
| PsuI | RGATCY | 1 cut(s) | 251 |
| SapI | GCTCTTC | 1 cut(s) | 93 |
| Sau3AI | GATC | 2 cut(s) | 37, 251 |
| Sau96I | GGNCC | 1 cut(s) | 169 |
| ScrFI | CCNGG | 1 cut(s) | 13 |
| SetI | ASST | 4 cut(s) | 115, 174, 183, 225 |
| SinI | GGWCC | 1 cut(s) | 169 |
| SmlI | CTYRAG | 2 cut(s) | 68, 239 |
| SmoI | CTYRAG | 2 cut(s) | 68, 239 |
| SsiI | CCGC | 1 cut(s) | 146 |
| SspMI | CTAG | 2 cut(s) | 224, 256 |
| StyD4I | CCNGG | 1 cut(s) | 11 |
| StyI | CCWWGG | 1 cut(s) | 133 |
| TaqI | TCGA | 3 cut(s) | 40, 96, 199 |
| TfiI | GAWTC | 1 cut(s) | 51 |
| VpaK11BI | GGWCC | 1 cut(s) | 169 |
| XmnI | GAANNNNTTC | 1 cut(s) | 62 |
| XspI | CTAG | 2 cut(s) | 224, 256 |