Rroxscaffold_7G00178010

Piezo non-specific cation channel, R-Ras-binding domain

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
17659621 .. 17669067
9447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00178010.1

Sequence Viewer

Length: 4047 bp
ATGAAATTCTGGATGGAGAATTTGTTCAATCTCTTTGGTCTTGAGATAAACATGATTGCTCTGCTCCTTGCAAGCTTTGCTTTGTTGAATGCCATATCTATGCTATACATTGCATTGCTTGCTGCTTGTATTATTTTGAATCGGCAGATTATACGCAAGTTATGGCCAATATTCGTCTTCCTGTTTGCTTCCATTCTCGTTCTTGAGTATTTTGCCATCTGGAAGAGTGCTTGGCCTCCAAATCATCCTGATGCAACTAATCCACGTTGCCATGATTGCTGGCAAAAGTCAACCATGTATTTCAGTTACTGCAAGTACTGCTGGTTAGGACTTAATGTTGATGATCCTCGAATGCTTATCAGCTATTTTATGGTCTTCATGCTTGCTTGTTTCAAACTTCGTGCTGATCATTTGTCCAGCTTCTCGGGCTTATCAACGTACCGTGAGATGATATCTCAACGTGAAAATACATTTGTATGGAGAGACCTCTCTTTTGAAACTAAAAGCATGTGGACTTTCCTTGATTATGTGAGGCTTTACTGCTATTGCCATCTACTGGATCTTGTGCTTGCCTTGGTTTTGATTACTGGAACCATTGAGTATGACATCCTGCACCTTGGTTATCTCGCTTTTGCACTGGTTTTCTTTCGGGTTAGACTTCAAATACTAAAGAAAAGGAACAAGATGTTCAAGTACTTGCGCATATACAATTTTGCTCTCATTGTTCTATCTCTTGCATATCAATCTCCTTTTGTGGGTTGTTCTGGGAAGTGTGAGACCGTATTCGAGATGATTGGCTTTTATAAATATGACTATGGGTTTCAGATGACTGCAAGATCAGCTCTCGTTGAGATTATCATATTTATGCTGGTATCACTTCAGTCATATATGTTTTCCTCTAAAGAGTTTGATTATGTGTCTCGATATCTTGAAGCTGAACAAATTGGTATGATTGTGCGCGAACAAGAAAAAAAAGCTGCATGGAAAACTGCACAATTACAACATATTCGTGAATCTGAGGAGAAGAAACGCCAGCGTAACTTGCAAGTGGAGAAGATGAAGTCAGAGATGCTCAACCTACAAATCCAGCTTCACAGCACGAACTCAGTTACTGACTGCGGTGACTCTTCTCCTGTCAGTGAAGGCCTAAGAAGGAGGAGAAGTACTTCTCTTAACTTGAACAATGATGCTTGGACCCCTGATAAAGAAGGGAATCTGGAAAACCTCACAGTTGGGGATTCTATGAAAAAAATTCAATGCAATCTATTCATTGTGAGATCACCGAAATTGAAGAGGACGTTGCTGATGGTACATTTTCTGATTCAGAGAAGAAAGAGAAGGGTAAAGGGGAAATCAATGGATAACCCTCTAATATCAGCAGTTCATCTGATAGGTGATGGTGTTTCCCAGGTACAGTCCATTGGAAATCAAGCAGTTAACAACCTTGTCAGCTTCTTGAATATTGACCAAGAATCCGATATCCATGAGCACTCTGCTGAGGATGGGGTATATGATGAGATGGAGAGCCAGAAAATAAAGTACGCCAGTTTTCATCGTTCATCTTCCCTGCAGTCTGATATGAGTTCTGATGCCACAAGTCTGCAGTTAGGAAGGATCTTCCGTCACATATGGTCCCGAATGCGGTCCAATAATGATGTTGTCTGTTATTGTTGCTTTGTCATCGTCTTTTTGTGGAACTTCAGTTTGCTTTCCATGGTGTATCTGGCAGCTTTATTCTTGTATGCACTGTGTGTTAATTCTGGTCCAAGTTACATATTCTGGGTTATCATGCTCATATACACAGAAGTTTATATTTTGCTTCTGTATCTATACCAGATTATCATCCAGCACTATGGTTCGCGTATTGCTTCAGACCTACTTCGTGAGTTGGGATTTCCTGCGCGTAAAATGTCTTCATTTGTTGTCAGTTCGTTGCCCCTATTTCTTGTGTACTTATTCACCCTTGTCCAGAGCTCTATAACCGCAAAGGATGGCGAGTGGATGTCTTCAACAGACTTCAACTTCTATAGGAGGAACGCTTTGCAGGAAAAGAGGTACTGGGTATCACTGACACAGGGAGCAGAGTCCCCTCCTTACTTTGTTCAGGTTTCTATGGATGTGTGCTCCTGGCCAGAGGATGGGATACAGCCAGAAAGGATTGAGTCTGGAGTAAATCAATTGCTTAGAATCATCCATGATGAAAGATGCAAGGCAAAGGATCCTAAGCGATGCCTATATGCCTCCCCTATAACAGACTGTGCTTCGGTAGAATGGTACAAGTCACTAACTCCAGCAGCTGATGTGGCAAAGGAGATTCTTAAAGCACTGCATGCTGGCTTTGTTGAAGAAATAGGATTCCCATATCCTATACTCTCTGTTATCGGGGGAGGCAAAAGGGACATTGATCTGTTTGCCTATGTATTTGGTGCTGATCTAAGTGTTTTCTTTTTAGTGGCCATATTCTACCAGTCCATTATAAAAAATAAAAGTGACTTTCTTGACGTGTATCAGCTTGAAGATCAATTTCCTAAAGAGTTCGTCTTCATCTTAATGATTATTTTTTTCTTGATTGTCCTTGATCGAATAATCTACCTCTGTTCATTTGCCACTGGAAAAGTGATTTACTACCTTTTTAACCTCATCCTCTTCACGTATTCAGTTACAAAGTATGCTTGGCATATGGAATCTTCCCGCCAACATGCTGGAGGATTAGCACTCCGTGCTATATTTCTTGCAAAATCAATATCTCTGGCACTGCAAGCTATACAACTTAGACATGGAATTCCTCATAAAAGCACTTTGTACCGTCAATTTTTGACCAGTGAAATTTCACGAATTAATTACTTAGGATATCGACTATATCGTGCTCTGCCATTCCTTTATGAATTGAGATGTGTACTTGACTGGTCATGTACAACCACATCTTTGACCATGTATGATTGGCTGAAACTGGAGGACATACATGCAAGCTTGTACCTCGTCAAATGTGATGCAGTCCTGAATAGAGCAACGCACAAACAAGGAGAAAAGCAAACACAAATGACCAAATGTTGCAATGGGATTTGTCTGTTTTTCATATTGATTTGTGTTATTTGGGCTCCAATGCTGATGTATAGCAGTGGTAACCCAACAAACATTGCAAATCCCATTAAAGATGCCAGTGTTCAAGTGGATATCAAGACAATGAGTGGAAGGTTGACCCTGTATCAGAGCACCCTCTGTGAAAAGATTGATTGGGATAACGTCAACTCTGATGTTAATCTTGACCCTCAAGGTTATTTGGAGACATATAACAAGAAAGATGTCCAGTTGATATGCTGTGAAGCTGATGCAAGTGTTCTGTGGCTTGTTCCTAATGTCGTTCAGACCAGATTCATACAGTCCCTCAATTGGGAGAGCAACATGGCTATAACTTTTACTTGGGTACTTTCCAGGGAGAGACCCAAAGGCAAGGAAGTTGTGAAATATGAAAATACTCTTGGTTTTGAGGATCTTCCAAAACAATCAGATGTACAAAAAGTCCTTAATGGCTCTATCAACAGCTTTAGGATACACAATGTCTATCCAAGATACTTGCGTGTCACAGGTTCTGGTGATGTCAGGCCACTGGAACCAGGGGAAGCTTTCGTCACTGCGGACCTCGTTATAAATCGTGCTAGTTACCAGTGGTGGTGGTCCTTCAGTGACATCAATTCATCAGATGTCAACGGATGTGGCGGTTTGAGAGGACCCATGGCCATTATTATGTCTGAAGAAACGCCGCCACAGGGTATTCTTGGTGACACACTAAGCAAGTTCAGCATCTGGGGTCTCTACATAACATTTGTTCTTGCTGTTGGCCGCTTTATCAGACTTCAGTGCTCTGACCTAAGAATGAGAATCCCCTATGAAAATCTCCCCTCCTGTGATAGGTTGTTGGCCATTTGTGAGGATATATATGCTGCAAGAGCAGAGGGTGAGCTTGGTATTGAAGAGATTCTTTACTGGACACTGGTGAAGATTTACAGATCACCACACATGCTGCTAGAATACACGAAACCTGACTAG

Protein Analysis

1348

Amino Acids

155.75

Weight (kDa)

8.15

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
THU_Piezo1 PF23188 549 - 667 1.8e-15 Piezo1-like, transmembrane helical unit
Piezo_THU9_anchor PF24874 802 - 1039 5.5e-66 Piezo, THU9 and anchor domain
Piezo_cap PF12166 1067 - 1347 7.6e-78 Piezo non-specific cation channel, cap domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 804, 2477, 3647
Acc16I TGCGCA 1 cut(s) 701
AccB7I CCANNNNNTGG 2 cut(s) 556, 2138
AccII CGCG 3 cut(s) 960, 1861, 1903
AciI CCGC 8 cut(s) 1119, 1642, 1983, 2692, 3635, 3717, 3761, 3841
AclWI GGATC 6 cut(s) 338, 567, 1622, 2213, 2226, 3498
AcoI YGGCCR 6 cut(s) 164, 2129, 2454, 3735, 3838, 3918
AcsI RAATTY 5 cut(s) 5, 19, 1251, 2781, 2826
AcuI CTGAAG 6 cut(s) 863, 1684, 1854, 3664, 3771, 3839
AdeI CACNNNGTG 2 cut(s) 1751, 2720
AfiI CCNNNNNNNGG 8 cut(s) 556, 755, 1641, 2138, 3390, 3391, 3767, 3909
AflIII ACRYGT 1 cut(s) 2502
AjiI CACGTC 1 cut(s) 2503
AjnI CCWGG 4 cut(s) 1407, 2126, 3431, 3613
AjuI GAANNNNNNNTTGG 2 cut(s) 3462, 3494
AloI GAACNNNNNNTCC 2 cut(s) 8, 40
Alw21I GWGCWC 6 cut(s) 1491, 1976, 2126, 2869, 3215, 3863
Alw26I GTCTC 6 cut(s) 477, 770, 924, 3278, 3433, 3815
AlwI GGATC 6 cut(s) 338, 567, 1622, 2213, 2226, 3498
AlwNI CAGNNNCTG 5 cut(s) 309, 1112, 2297, 3590, 3804
Ama87I CYCGRG 1 cut(s) 424
AoxI GGCC 9 cut(s) 164, 233, 1144, 2129, 2454, 3602, 3735, 3838, 3918
ApeKI GCWGC 6 cut(s) 122, 977, 1727, 2294, 3941, 4021
ApoI RAATTY 5 cut(s) 5, 19, 1251, 2781, 2826
ArsI GACNNNNNNTTYG 2 cut(s) 476, 508
AseI ATTAAT 1 cut(s) 2838
Asp700I GAANNNNTTC 3 cut(s) 23, 1165, 3975
AspLEI GCGC 3 cut(s) 702, 960, 1903
AspS9I GGNCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
AsuHPI GGTGA 9 cut(s) 1133, 1272, 1406, 1951, 3605, 3791, 3968, 4002, 4006
AvaI CYCGRG 1 cut(s) 424
AvaII GGWCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
BaeI ACNNNNGTAYC 2 cut(s) 3562, 3595
BalI TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
BamHI GGATCC 1 cut(s) 2218
BanII GRGCYC 2 cut(s) 1976, 3100
BarI GAAGNNNNNNTAC 2 cut(s) 1897, 1929
BbsI GAAGAC 5 cut(s) 169, 367, 1905, 1998, 2533
Bbv12I GWGCWC 6 cut(s) 1491, 1976, 2126, 2869, 3215, 3863
BbvCI CCTCAGC 1 cut(s) 1497
BbvI GCAGC 6 cut(s) 109, 964, 1739, 2306, 3928, 4008
BccI CCATC 9 cut(s) 7, 224, 558, 1300, 1391, 1496, 1513, 1985, 2132
BciT130I CCWGG 4 cut(s) 1409, 2128, 3433, 3615
BciVI GTATCC 2 cut(s) 2136, 3543
BclI TGATCA 1 cut(s) 406
BcoDI GTCTC 6 cut(s) 477, 770, 924, 3278, 3433, 3815
BfaI CTAG 3 cut(s) 3657, 4025, 4045
BfmI CTRYAG 3 cut(s) 1568, 1601, 2026
BfuI GTATCC 2 cut(s) 2136, 3543
BisI GCNGC 8 cut(s) 123, 978, 1728, 2295, 3761, 3841, 3942, 4022
BlsI GCNGC 8 cut(s) 124, 979, 1729, 2296, 3762, 3842, 3943, 4023
BmcAI AGTACT 3 cut(s) 317, 695, 1165
Bme1390I CCNGG 4 cut(s) 1409, 2128, 3433, 3615
Bme18I GGWCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
BmeT110I CYCGRG 1 cut(s) 424
BmgBI CACGTC 1 cut(s) 2503
BmgT120I GGNCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
BmiI GGNNCC 7 cut(s) 592, 1196, 1634, 2220, 3099, 3612, 3730
BmrFI CCNGG 4 cut(s) 1409, 2128, 3433, 3615
BmrI ACTGGG 1 cut(s) 2068
BmuI ACTGGG 1 cut(s) 2068
BpiI GAAGAC 5 cut(s) 169, 367, 1905, 1998, 2533
BpmI CTGGAG 4 cut(s) 2187, 2274, 2724, 2972
Bpu10I CCTNAGC 2 cut(s) 1497, 2223
BpuEI CTTGAG 3 cut(s) 62, 224, 3255
BsaAI YACGTR 1 cut(s) 2652
BsaBI GATNNNNATC 2 cut(s) 1841, 3258
BsaI GGTCTC 4 cut(s) 477, 770, 3433, 3815
BsaJI CCNNGG 7 cut(s) 573, 616, 1407, 1713, 3432, 3614, 3732
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 1147, 1177
Bsc4I CCNNNNNNNGG 8 cut(s) 556, 755, 1641, 2138, 3390, 3391, 3767, 3909
Bse3DI GCAATG 4 cut(s) 108, 113, 3061, 3135
Bse8I GATNNNNATC 2 cut(s) 1841, 3258
BseBI CCWGG 4 cut(s) 1409, 2128, 3433, 3615
BseDI CCNNGG 7 cut(s) 573, 616, 1407, 1713, 3432, 3614, 3732
BseJI GATNNNNATC 2 cut(s) 1841, 3258
BseLI CCNNNNNNNGG 8 cut(s) 556, 755, 1641, 2138, 3390, 3391, 3767, 3909
BseMI GCAATG 4 cut(s) 108, 113, 3061, 3135
BseMII CTCAG 3 cut(s) 1008, 1119, 1488
BseRI GAGGAG 2 cut(s) 1034, 1171
BseXI GCAGC 6 cut(s) 109, 964, 1739, 2306, 3928, 4008
BsgI GTGCAG 2 cut(s) 596, 975
Bsh1236I CGCG 3 cut(s) 960, 1861, 1903
BshFI GGCC 9 cut(s) 166, 235, 1146, 2131, 2456, 3604, 3737, 3840, 3920
BsiHKAI GWGCWC 6 cut(s) 1491, 1976, 2126, 2869, 3215, 3863
BsiHKCI CYCGRG 1 cut(s) 424
BslFI GGGAC 4 cut(s) 1618, 2071, 2411, 3367
BslI CCNNNNNNNGG 8 cut(s) 556, 755, 1641, 2138, 3390, 3391, 3767, 3909
BsmAI GTCTC 6 cut(s) 477, 770, 924, 3278, 3433, 3815
BsmFI GGGAC 4 cut(s) 1618, 2071, 2411, 3367
BsmI GAATGC 3 cut(s) 94, 357, 1644
BsnI GGCC 9 cut(s) 166, 235, 1146, 2131, 2456, 3604, 3737, 3840, 3920
Bso31I GGTCTC 4 cut(s) 477, 770, 3433, 3815
BsoBI CYCGRG 1 cut(s) 424
Bsp1286I GDGCHC 7 cut(s) 1491, 1976, 2126, 2869, 3100, 3215, 3863
Bsp1407I TGTACA 2 cut(s) 2912, 3511
Bsp19I CCATGG 2 cut(s) 1713, 3732
BspACI CCGC 8 cut(s) 1119, 1642, 1983, 2692, 3635, 3717, 3761, 3841
BspANI GGCC 9 cut(s) 166, 235, 1146, 2131, 2456, 3604, 3737, 3840, 3920
BspCNI CTCAG 3 cut(s) 1009, 1118, 1489
BspFNI CGCG 3 cut(s) 960, 1861, 1903
BspLI GGNNCC 7 cut(s) 592, 1196, 1634, 2220, 3099, 3612, 3730
BspMAI CTGCAG 2 cut(s) 1572, 1605
BspPI GGATC 6 cut(s) 338, 567, 1622, 2213, 2226, 3498
BspTNI GGTCTC 4 cut(s) 477, 770, 3433, 3815
BsrDI GCAATG 4 cut(s) 108, 113, 3061, 3135
BsrGI TGTACA 2 cut(s) 2912, 3511
BssECI CCNNGG 7 cut(s) 573, 616, 1407, 1713, 3432, 3614, 3732
BssT1I CCWWGG 4 cut(s) 573, 616, 1713, 3732
Bst2UI CCWGG 4 cut(s) 1409, 2128, 3433, 3615
Bst4CI ACNGT 8 cut(s) 443, 781, 1231, 1416, 1749, 2258, 2807, 3381
Bst6I CTCTTC 5 cut(s) 218, 1132, 1286, 2651, 3966
BstAPI GCANNNNNTGC 5 cut(s) 77, 119, 318, 2330, 2720
BstAUI TGTACA 2 cut(s) 2912, 3511
BstBAI YACGTR 1 cut(s) 2652
BstDSI CCRYGG 2 cut(s) 1713, 3732
BstEII GGTNACC 1 cut(s) 3122
BstENI CCTNNNNNAGG 1 cut(s) 3907
BstFNI CGCG 3 cut(s) 960, 1861, 1903
BstHHI GCGC 3 cut(s) 702, 960, 1903
BstMAI GTCTC 6 cut(s) 477, 770, 924, 3278, 3433, 3815
BstNI CCWGG 4 cut(s) 1409, 2128, 3433, 3615
BstNSI RCATGY 5 cut(s) 511, 2333, 2702, 2966, 4021
BstPI GGTNACC 1 cut(s) 3122
BstSCI CCNGG 4 cut(s) 1407, 2126, 3431, 3613
BstSFI CTRYAG 3 cut(s) 1568, 1601, 2026
BstUI CGCG 3 cut(s) 960, 1861, 1903
BstV1I GCAGC 6 cut(s) 109, 964, 1739, 2306, 3928, 4008
BstV2I GAAGAC 5 cut(s) 169, 367, 1905, 1998, 2533
BstX2I RGATCY 4 cut(s) 559, 1614, 2218, 3490
BstXI CCANNNNNNTGG 2 cut(s) 1853, 2702
BstYI RGATCY 4 cut(s) 559, 1614, 2218, 3490
BsuI GTATCC 2 cut(s) 2136, 3543
BsuRI GGCC 9 cut(s) 166, 235, 1146, 2131, 2456, 3604, 3737, 3840, 3920
BtgI CCRYGG 2 cut(s) 1713, 3732
BtgZI GCGATG 1 cut(s) 2242
BtrI CACGTC 1 cut(s) 2503
BtsI GCAGTG 4 cut(s) 2324, 2753, 3124, 3630
CaiI CAGNNNCTG 5 cut(s) 309, 1112, 2297, 3590, 3804
CfoI GCGC 3 cut(s) 702, 960, 1903
Cfr13I GGNCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
CspCI CAANNNNNGTGG 2 cut(s) 3694, 3729
DraIII CACNNNGTG 2 cut(s) 1751, 2720
EaeI YGGCCR 6 cut(s) 164, 2129, 2454, 3735, 3838, 3918
Eam1104I CTCTTC 5 cut(s) 218, 1132, 1286, 2651, 3966
EarI CTCTTC 5 cut(s) 218, 1132, 1286, 2651, 3966
Ecl136II GAGCTC 1 cut(s) 1974
Eco130I CCWWGG 4 cut(s) 573, 616, 1713, 3732
Eco147I AGGCCT 1 cut(s) 1146
Eco24I GRGCYC 2 cut(s) 1976, 3100
Eco31I GGTCTC 4 cut(s) 477, 770, 3433, 3815
Eco32I GATATC 5 cut(s) 453, 926, 1480, 2852, 3175
Eco47I GGWCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
Eco53kI GAGCTC 1 cut(s) 1974
Eco57I CTGAAG 6 cut(s) 863, 1684, 1854, 3664, 3771, 3839
Eco88I CYCGRG 1 cut(s) 424
Eco91I GGTNACC 1 cut(s) 3122
EcoICRI GAGCTC 1 cut(s) 1974
EcoNI CCTNNNNNAGG 1 cut(s) 3907
EcoO109I RGGNCCY 1 cut(s) 3728
EcoO65I GGTNACC 1 cut(s) 3122
EcoRI GAATTC 1 cut(s) 2781
EcoRII CCWGG 4 cut(s) 1407, 2126, 3431, 3613
EcoRV GATATC 5 cut(s) 453, 926, 1480, 2852, 3175
EcoT14I CCWWGG 4 cut(s) 573, 616, 1713, 3732
EcoT38I GRGCYC 2 cut(s) 1976, 3100
ErhI CCWWGG 4 cut(s) 573, 616, 1713, 3732
FalI AAGNNNNNCTT 4 cut(s) 64, 96, 3963, 3995
FaqI GGGAC 4 cut(s) 1618, 2071, 2411, 3367
FauI CCCGC 1 cut(s) 2699
FauNDI CATATG 2 cut(s) 1628, 2679
FbaI TGATCA 1 cut(s) 406
Fnu4HI GCNGC 8 cut(s) 123, 978, 1728, 2295, 3761, 3841, 3942, 4022
FriOI GRGCYC 2 cut(s) 1976, 3100
Fsp4HI GCNGC 8 cut(s) 123, 978, 1728, 2295, 3761, 3841, 3942, 4022
FspBI CTAG 3 cut(s) 3657, 4025, 4045
FspI TGCGCA 1 cut(s) 701
GlaI GCGC 3 cut(s) 701, 959, 1902
GluI GCNGC 8 cut(s) 123, 978, 1728, 2295, 3761, 3841, 3942, 4022
GsuI CTGGAG 4 cut(s) 2187, 2274, 2724, 2972
HaeIII GGCC 9 cut(s) 166, 235, 1146, 2131, 2456, 3604, 3737, 3840, 3920
HhaI GCGC 3 cut(s) 702, 960, 1903
Hin6I GCGC 3 cut(s) 700, 958, 1901
HinP1I GCGC 3 cut(s) 700, 958, 1901
HincII GTYRAC 5 cut(s) 291, 1438, 3198, 3247, 3706
HindII GTYRAC 5 cut(s) 291, 1438, 3198, 3247, 3706
HindIII AAGCTT 3 cut(s) 73, 2968, 3621
HpaI GTTAAC 1 cut(s) 1438
HphI GGTGA 9 cut(s) 1133, 1272, 1406, 1951, 3605, 3791, 3968, 4002, 4006
Hpy166II GTNNAC 8 cut(s) 291, 513, 1438, 1951, 2897, 3198, 3247, 3706
Hpy8I GTNNAC 8 cut(s) 291, 513, 1438, 1951, 2897, 3198, 3247, 3706
HpyAV CCTTC 7 cut(s) 1136, 1146, 1202, 1332, 1605, 3186, 3688
HpyCH4III ACNGT 8 cut(s) 443, 781, 1231, 1416, 1749, 2258, 2807, 3381
HpyCH4IV ACGT 7 cut(s) 265, 437, 460, 1298, 2502, 2651, 3243
HpySE526I ACGT 7 cut(s) 265, 437, 460, 1298, 2502, 2651, 3243
HspAI GCGC 3 cut(s) 700, 958, 1901
Ksp22I TGATCA 1 cut(s) 406
KspAI GTTAAC 1 cut(s) 1438
LmnI GCTCC 4 cut(s) 69, 2078, 2129, 3103
Lsp1109I GCAGC 6 cut(s) 109, 964, 1739, 2306, 3928, 4008
MaeI CTAG 3 cut(s) 3657, 4025, 4045
MaeII ACGT 7 cut(s) 265, 437, 460, 1298, 2502, 2651, 3243
MfeI CAATTG 2 cut(s) 2177, 3388
MflI RGATCY 4 cut(s) 559, 1614, 2218, 3490
MhlI GDGCHC 7 cut(s) 1491, 1976, 2126, 2869, 3100, 3215, 3863
MlsI TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
MluNI TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
MlyI GAGTC 3 cut(s) 1118, 2093, 2171
Mox20I TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
MroXI GAANNNNTTC 3 cut(s) 23, 1165, 3975
MscI TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
MslI CAYNNNNRTG 7 cut(s) 98, 249, 475, 863, 1008, 2549, 3743
Msp20I TGGCCA 5 cut(s) 166, 2131, 2456, 3737, 3920
MspA1I CMGCKG 1 cut(s) 2297
MspR9I CCNGG 4 cut(s) 1409, 2128, 3433, 3615
MunI CAATTG 2 cut(s) 2177, 3388
Mva1269I GAATGC 3 cut(s) 94, 357, 1644
MvaI CCWGG 4 cut(s) 1409, 2128, 3433, 3615
MvnI CGCG 3 cut(s) 960, 1861, 1903
NcoI CCATGG 2 cut(s) 1713, 3732
NdeI CATATG 2 cut(s) 1628, 2679
NlaIV GGNNCC 7 cut(s) 592, 1196, 1634, 2220, 3099, 3612, 3730
NmuCI GTSAC 8 cut(s) 1121, 1622, 2280, 2489, 3580, 3628, 3683, 3779
NsbI TGCGCA 1 cut(s) 701
NspI RCATGY 5 cut(s) 511, 2333, 2702, 2966, 4021
PaeI GCATGC 1 cut(s) 2333
PceI AGGCCT 1 cut(s) 1146
PcsI WCGNNNNNNNCGW 1 cut(s) 2860
PctI GAATGC 3 cut(s) 94, 357, 1644
PdmI GAANNNNTTC 3 cut(s) 23, 1165, 3975
PflMI CCANNNNNTGG 2 cut(s) 556, 2138
PkrI GCNGC 8 cut(s) 124, 979, 1729, 2296, 3762, 3842, 3943, 4023
PleI GAGTC 3 cut(s) 1118, 2092, 2170
PpsI GAGTC 3 cut(s) 1118, 2092, 2170
Ppu21I YACGTR 1 cut(s) 2652
PpuMI RGGWCCY 1 cut(s) 3728
PshBI ATTAAT 1 cut(s) 2838
PsiI TTATAA 3 cut(s) 804, 2477, 3647
Psp124BI GAGCTC 1 cut(s) 1976
Psp5II RGGWCCY 1 cut(s) 3728
Psp6I CCWGG 4 cut(s) 1407, 2126, 3431, 3613
PspEI GGTNACC 1 cut(s) 3122
PspGI CCWGG 4 cut(s) 1407, 2126, 3431, 3613
PspN4I GGNNCC 7 cut(s) 592, 1196, 1634, 2220, 3099, 3612, 3730
PspPI GGNCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
PspPPI RGGWCCY 1 cut(s) 3728
PstI CTGCAG 2 cut(s) 1572, 1605
PstNI CAGNNNCTG 5 cut(s) 309, 1112, 2297, 3590, 3804
PsuI RGATCY 4 cut(s) 559, 1614, 2218, 3490
PvuII CAGCTG 1 cut(s) 2297
RseI CAYNNNNRTG 7 cut(s) 98, 249, 475, 863, 1008, 2549, 3743
SacI GAGCTC 1 cut(s) 1976
SatI GCNGC 8 cut(s) 123, 978, 1728, 2295, 3761, 3841, 3942, 4022
Sau96I GGNCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
ScaI AGTACT 3 cut(s) 317, 695, 1165
SchI GAGTC 3 cut(s) 1118, 2093, 2171
ScrFI CCNGG 4 cut(s) 1409, 2128, 3433, 3615
SduI GDGCHC 7 cut(s) 1491, 1976, 2126, 2869, 3100, 3215, 3863
SfcI CTRYAG 3 cut(s) 1568, 1601, 2026
SinI GGWCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
SmiMI CAYNNNNRTG 7 cut(s) 98, 249, 475, 863, 1008, 2549, 3743
SmlI CTYRAG 3 cut(s) 41, 203, 3270
SmoI CTYRAG 3 cut(s) 41, 203, 3270
SphI GCATGC 1 cut(s) 2333
SseBI AGGCCT 1 cut(s) 1146
SsiI CCGC 8 cut(s) 1119, 1642, 1983, 2692, 3635, 3717, 3761, 3841
SspI AATATT 2 cut(s) 171, 1462
SspMI CTAG 3 cut(s) 3657, 4025, 4045
SstI GAGCTC 1 cut(s) 1976
StuI AGGCCT 1 cut(s) 1146
StyD4I CCNGG 4 cut(s) 1407, 2126, 3431, 3613
StyI CCWWGG 4 cut(s) 573, 616, 1713, 3732
TaaI ACNGT 8 cut(s) 443, 781, 1231, 1416, 1749, 2258, 2807, 3381
TaiI ACGT 7 cut(s) 268, 440, 463, 1301, 2505, 2654, 3246
TaqI TCGA 5 cut(s) 349, 786, 922, 2581, 2854
TatI WGTACW 7 cut(s) 315, 693, 1163, 1950, 2896, 2912, 3511
TauI GCSGC 2 cut(s) 3763, 3843
TseFI GTSAC 8 cut(s) 1121, 1622, 2280, 2489, 3580, 3628, 3683, 3779
TseI GCWGC 6 cut(s) 122, 977, 1727, 2294, 3941, 4021
Tsp45I GTSAC 8 cut(s) 1121, 1622, 2280, 2489, 3580, 3628, 3683, 3779
TspGWI ACGGA 3 cut(s) 1610, 2708, 3723
Van91I CCANNNNNTGG 2 cut(s) 556, 2138
VpaK11BI GGWCC 7 cut(s) 1194, 1632, 1644, 1763, 3637, 3675, 3728
VspI ATTAAT 1 cut(s) 2838
XagI CCTNNNNNAGG 1 cut(s) 3907
XapI RAATTY 5 cut(s) 5, 19, 1251, 2781, 2826
XceI RCATGY 5 cut(s) 511, 2333, 2702, 2966, 4021
XcmI CCANNNNNNNNNTGG 2 cut(s) 1720, 3166
XmnI GAANNNNTTC 3 cut(s) 23, 1165, 3975
XspI CTAG 3 cut(s) 3657, 4025, 4045
ZrmI AGTACT 3 cut(s) 317, 695, 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.