Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006607

Physical Location & Seq

Genomic Coordinates Reverse (-)

35541196 .. 35542677

Gene Structure 1482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0222300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCAGATGCCATTGCTAGTTTAGCTGCTGCGTTCCAGTTGGCTGATTCCGCTCGGGTTGATCTAGGATCGGCGGGAGCAGCTGCTCTTCACGATGATCACTGGTATATGGTGGGGCGCTTGCTTGGTCCGAAAGCGAAATTTCCAGGGTTCAAGGGTACTATTCCTATTATTTGGAGGATTAAGAATGGGCTTACCATTCGCGATGTTGGCGATCGTTATGTATTCCAGTTTTCTCAGGAGGCGGAAAGAAACCGGATCCTGCATAGTGGACCTTGGTTCTATAGGAATACCATGTTGATTGTGGGGGAGTATGATGGTTTCGGTGCTGTGGAGGCTATTCCCCTTCAAACTTTGGAGACCTGGGTGGCTGTCCAGGGATTACCTCCGGCTCTGCGCAATAAGGTGGCCTTGGCGTTGATTGGATCCTCCATTGGGCGGGTCATAAAGTTTGACCAAACGGCTCTTAGCCGAAAGGAGGAAGAACAGAGGATTAGGCTTGTGTTTGACGTGAGGCGTAGGGTTAGGGTTTGGAGGGTCTTTACCTTTGCTCCCACGGTTGAACCTGAACTCGATCTAGTGTTTGAAAAGGTGAAGGGATTCTGCAGAGATTGTGGGCTCTTTGAGCATGATGCAACGGGTTGCGATCAGCTTCTGGTGAAGGAACGAGAAGAGTTCATGCTTCAGCCGGCGGCGGCGGCATTGGCGGATCTCTCTATTTTTTCACCTAGCTCGTCCCGGGGTTCTGGTGATTCGATGCCCAAGGGTGTGGTGTCGTTGTCTGGCGCAGGGGCTATCGGGACTGGGAGCAATGCCATGATTATTGGTTCTAAGGAAGATTGCCGTGCCAAACTGATCGACATGGCTTCGGTGGAAGGACAGGCATCGCTGCACTCTAAGGGTGTGGGAAATCCCAGCTTAGTGGAGAAAGGTTTAGCGGGGCTAGATAATGCATTACTGAAGAATTGGGTGAGTACTTTTTCCTCCCCTCCTGTTATGGATGTTATGAAGAAGATGGAAATGCATGTGGTTGTCGCTCCTTCACCTGTTATTATGGATGAGGATGTGACTATTCAGGAGTTGGCTTCTCTGTCTGGGAAGAAACGGAAGGTATTGAATGAATCTGCTCGAACCAGGAAGCGATTCTTGGCTCTTCCAGAACCGGGACTCTCAATTGAGGATGGATTAACTTTGGCTCTGAAACATAAGCATGGTCATCTTCTGATATCTCCCAAGAAGAAGAAGATGGGAAGACCGAAGGGCAGTAAGAATAAGTCCAAGCTAGCTCGGGATTTGACTCTTGATGTGAAACCCAAACGTCCGAAAAAATGGAAGACTCATAGTCAGGCTTCTGAGACTGCAGATGCCAATATCATTGAGGTGGTAGGGGTGCAAGTTGAGGAGGCTAGTCCTATTGTGGCCTCGGTTTCAGTTGAAGGGGGAGTGGGCGAGGACTCGCCTACTTCATTTGTTTCTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005261 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0022803 GO:0022836 GO:0022838 GO:0022857 GO:0022890 GO:0034220 GO:0042391 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071214 GO:0071260 GO:0071496 GO:0098655 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Piezo_RRas_bdg

Protein Analysis

493

Amino Acids

53.54

Weight (kDa)

9.19

Isoelectric Point (pI)

41.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	35 - 105	2.2e-09	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48060 AT2G48060 AT2G48060
fragaria_vesca	FvH4_2g24180 FvH4_2g24180 FvH4_2g24180 FvH4_2g24180 FvH4_2g24180
malus_domestica	MD03G1271800.v1.1 MD11G1292400.v1.1
prunus_persica	Prupe.8G248000_v2.0.a1 Prupe.8G248000_v2.0.a1
pyrus_communis	pycom03g21640 pycom11g25880
rosa_chinensis	RchiOBHm_Chr6g0291991
rosa_laevigata	RLG00000012072
rosa_multiflora	Rmu_sc0008666.1_g000011
rosa_roxburghii	Rroxscaffold_7G00175510 Rroxscaffold_7G00178010
rosa_rugosa	Rorug06G0222200 Rorug06G0222300
rosa_samantha	Rh6AG336100 Rh6BG343500 Rh6CG349700 Rh6DG336500
rosa_wichuraiana	Rw6G029260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	398
AccBSI	CCGCTC	1 cut(s)	53
AccII	CGCG	1 cut(s)	204
AciI	CCGC	9 cut(s)	51, 74, 245, 439, 692, 695, 698, 707, 938
AclWI	GGATC	6 cut(s)	76, 253, 266, 420, 433, 717
AcsI	RAATTY	1 cut(s)	140
AcuI	CTGAAG	2 cut(s)	668, 980
AfaI	GTAC	2 cut(s)	160, 976
AfiI	CCNNNNNNNGG	4 cut(s)	435, 438, 478, 1163
AgsI	TTSAA	6 cut(s)	154, 350, 563, 587, 1117, 1436
AhdI	GACNNNNNGTC	1 cut(s)	1341
AjiI	CACGTC	1 cut(s)	511
AjnI	CCWGG	4 cut(s)	145, 362, 375, 1133
AjuI	GAANNNNNNNTTGG	2 cut(s)	1130, 1162
AluBI	AGCT	7 cut(s)	26, 83, 652, 732, 918, 1282, 1286
AluI	AGCT	7 cut(s)	26, 83, 652, 732, 918, 1282, 1286
Alw26I	GTCTC	2 cut(s)	353, 1349
AlwI	GGATC	6 cut(s)	76, 253, 266, 420, 433, 717
AlwNI	CAGNNNCTG	1 cut(s)	655
Ama87I	CYCGRG	3 cut(s)	54, 738, 1287
AoxI	GGCC	2 cut(s)	408, 1419
ApeKI	GCWGC	5 cut(s)	26, 29, 80, 83, 889
ApoI	RAATTY	1 cut(s)	140
Asp700I	GAANNNNTTC	2 cut(s)	599, 1142
AspLEI	GCGC	3 cut(s)	120, 399, 788
AspS9I	GGNCC	2 cut(s)	128, 272
AsuC2I	CCSGG	3 cut(s)	739, 740, 1164
AsuHPI	GGTGA	6 cut(s)	604, 670, 717, 761, 982, 1035
AsuNHI	GCTAGC	1 cut(s)	1282
AvaI	CYCGRG	3 cut(s)	54, 738, 1287
AvaII	GGWCC	2 cut(s)	128, 272
BamHI	GGATCC	2 cut(s)	258, 425
BanII	GRGCYC	1 cut(s)	621
BbsI	GAAGAC	2 cut(s)	1258, 1340
BbvI	GCAGC	5 cut(s)	13, 16, 70, 92, 876
BccI	CCATC	4 cut(s)	311, 1009, 1175, 1240
BceAI	ACGGC	2 cut(s)	477, 828
BciT130I	CCWGG	4 cut(s)	147, 364, 377, 1135
BclI	TGATCA	1 cut(s)	97
BcnI	CCSGG	3 cut(s)	739, 740, 1164
BcoDI	GTCTC	2 cut(s)	353, 1349
BfaI	CTAG	7 cut(s)	18, 65, 578, 729, 944, 1283, 1407
BfmI	CTRYAG	3 cut(s)	283, 604, 1359
BfoI	RGCGCY	1 cut(s)	121
BisI	GCNGC	8 cut(s)	27, 30, 81, 84, 693, 696, 699, 890
BlsI	GCNGC	8 cut(s)	28, 31, 82, 85, 694, 697, 700, 891
BmcAI	AGTACT	1 cut(s)	976
Bme1390I	CCNGG	7 cut(s)	147, 364, 377, 739, 740, 1135, 1164
Bme18I	GGWCC	2 cut(s)	128, 272
BmeRI	GACNNNNNGTC	1 cut(s)	1341
BmeT110I	CYCGRG	3 cut(s)	54, 738, 1287
BmgBI	CACGTC	1 cut(s)	511
BmgT120I	GGNCC	2 cut(s)	128, 272
BmiI	GGNNCC	2 cut(s)	260, 427
BmrFI	CCNGG	7 cut(s)	147, 364, 377, 739, 740, 1135, 1164
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	4 cut(s)	622, 747, 893, 1354
BmtI	GCTAGC	1 cut(s)	1286
BmuI	ACTGGG	1 cut(s)	813
BpiI	GAAGAC	2 cut(s)	1258, 1340
BpuMI	CCSGG	3 cut(s)	739, 740, 1164
BsaI	GGTCTC	1 cut(s)	353
BsaWI	WCCGGW	1 cut(s)	255
BsaXI	ACNNNNNCTCC	2 cut(s)	535, 565
Bsc4I	CCNNNNNNNGG	4 cut(s)	435, 438, 478, 1163
Bse118I	RCCGGY	1 cut(s)	688
Bse1I	ACTGG	4 cut(s)	37, 107, 229, 808
Bse3DI	GCAATG	2 cut(s)	12, 817
BseBI	CCWGG	4 cut(s)	147, 364, 377, 1135
BseGI	GGATG	4 cut(s)	1006, 1063, 1069, 1186
BseLI	CCNNNNNNNGG	4 cut(s)	435, 438, 478, 1163
BseMI	GCAATG	2 cut(s)	12, 817
BseMII	CTCAG	2 cut(s)	251, 1344
BseNI	ACTGG	4 cut(s)	37, 107, 229, 808
BseRI	GAGGAG	1 cut(s)	1415
BseXI	GCAGC	5 cut(s)	13, 16, 70, 92, 876
BseYI	CCCAGC	1 cut(s)	914
BsgI	GTGCAG	1 cut(s)	875
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	217
BshFI	GGCC	2 cut(s)	410, 1421
BsiEI	CGRYCG	1 cut(s)	217
BsiHKCI	CYCGRG	3 cut(s)	54, 738, 1287
BsiSI	CCGG	5 cut(s)	256, 389, 689, 739, 1163
BslFI	GGGAC	3 cut(s)	721, 814, 1179
BslI	CCNNNNNNNGG	4 cut(s)	435, 438, 478, 1163
BsmAI	GTCTC	2 cut(s)	353, 1349
BsmFI	GGGAC	3 cut(s)	721, 814, 1179
BsnI	GGCC	2 cut(s)	410, 1421
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	3 cut(s)	54, 738, 1287
Bsp1286I	GDGCHC	1 cut(s)	621
Bsp68I	TCGCGA	1 cut(s)	204
BspACI	CCGC	9 cut(s)	51, 74, 245, 439, 692, 695, 698, 707, 938
BspANI	GGCC	2 cut(s)	410, 1421
BspCNI	CTCAG	2 cut(s)	250, 1345
BspFNI	CGCG	1 cut(s)	204
BspLI	GGNNCC	2 cut(s)	260, 427
BspMAI	CTGCAG	2 cut(s)	608, 1363
BspOI	GCTAGC	1 cut(s)	1286
BspPI	GGATC	6 cut(s)	76, 253, 266, 420, 433, 717
BspQI	GCTCTTC	2 cut(s)	93, 1158
BspTNI	GGTCTC	1 cut(s)	353
BsrBI	CCGCTC	1 cut(s)	53
BsrDI	GCAATG	2 cut(s)	12, 817
BsrFI	RCCGGY	1 cut(s)	688
BsrI	ACTGG	4 cut(s)	37, 107, 229, 808
BssAI	RCCGGY	1 cut(s)	688
BssT1I	CCWWGG	3 cut(s)	275, 411, 762
Bst2UI	CCWGG	4 cut(s)	147, 364, 377, 1135
Bst4CI	ACNGT	1 cut(s)	559
Bst6I	CTCTTC	3 cut(s)	93, 666, 1158
BstC8I	GCNNGC	3 cut(s)	122, 690, 1284
BstDEI	CTNAG	6 cut(s)	237, 467, 831, 897, 919, 1353
BstDSI	CCRYGG	1 cut(s)	555
BstF5I	GGATG	4 cut(s)	1006, 1063, 1069, 1186
BstFNI	CGCG	1 cut(s)	204
BstH2I	RGCGCY	1 cut(s)	121
BstHHI	GCGC	3 cut(s)	120, 399, 788
BstMAI	GTCTC	2 cut(s)	353, 1349
BstMCI	CGRYCG	1 cut(s)	217
BstMWI	GCNNNNNNNGC	8 cut(s)	23, 50, 80, 210, 335, 625, 698, 704
BstNI	CCWGG	4 cut(s)	147, 364, 377, 1135
BstNSI	RCATGY	1 cut(s)	1028
BstSCI	CCNGG	7 cut(s)	145, 362, 375, 737, 738, 1133, 1162
BstSFI	CTRYAG	3 cut(s)	283, 604, 1359
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	5 cut(s)	13, 16, 70, 92, 876
BstV2I	GAAGAC	2 cut(s)	1258, 1340
BstX2I	RGATCY	3 cut(s)	258, 425, 709
BstXI	CCANNNNNNTGG	2 cut(s)	769, 922
BstYI	RGATCY	3 cut(s)	258, 425, 709
BsuRI	GGCC	2 cut(s)	410, 1421
BtgI	CCRYGG	1 cut(s)	555
BtgZI	GCGATG	2 cut(s)	219, 870
BtrI	CACGTC	1 cut(s)	511
BtsCI	GGATG	4 cut(s)	1006, 1063, 1069, 1186
BtsIMutI	CAGTG	1 cut(s)	100
BtuMI	TCGCGA	1 cut(s)	204
Cac8I	GCNNGC	3 cut(s)	122, 690, 1284
CaiI	CAGNNNCTG	1 cut(s)	655
CfoI	GCGC	3 cut(s)	120, 399, 788
Cfr10I	RCCGGY	1 cut(s)	688
Cfr13I	GGNCC	2 cut(s)	128, 272
Cfr9I	CCCGGG	1 cut(s)	738
Csp6I	GTAC	2 cut(s)	159, 975
CviAII	CATG	7 cut(s)	295, 629, 679, 817, 862, 1025, 1211
CviQI	GTAC	2 cut(s)	159, 975
DdeI	CTNAG	6 cut(s)	237, 467, 831, 897, 919, 1353
DriI	GACNNNNNGTC	1 cut(s)	1341
Eam1104I	CTCTTC	3 cut(s)	93, 666, 1158
Eam1105I	GACNNNNNGTC	1 cut(s)	1341
EarI	CTCTTC	3 cut(s)	93, 666, 1158
EciI	GGCGGA	2 cut(s)	260, 722
Eco130I	CCWWGG	3 cut(s)	275, 411, 762
Eco24I	GRGCYC	1 cut(s)	621
Eco31I	GGTCTC	1 cut(s)	353
Eco32I	GATATC	1 cut(s)	1227
Eco47I	GGWCC	2 cut(s)	128, 272
Eco57I	CTGAAG	2 cut(s)	668, 980
Eco88I	CYCGRG	3 cut(s)	54, 738, 1287
EcoRII	CCWGG	4 cut(s)	145, 362, 375, 1133
EcoRV	GATATC	1 cut(s)	1227
EcoT14I	CCWWGG	3 cut(s)	275, 411, 762
EcoT22I	ATGCAT	2 cut(s)	955, 1026
EcoT38I	GRGCYC	1 cut(s)	621
ErhI	CCWWGG	3 cut(s)	275, 411, 762
FaeI	CATG	7 cut(s)	298, 632, 682, 820, 865, 1028, 1214
FalI	AAGNNNNNCTT	4 cut(s)	395, 427, 1130, 1162
FaqI	GGGAC	3 cut(s)	721, 814, 1179
FatI	CATG	7 cut(s)	294, 628, 678, 816, 861, 1024, 1210
FauI	CCCGC	3 cut(s)	67, 432, 931
FbaI	TGATCA	1 cut(s)	97
Fnu4HI	GCNGC	8 cut(s)	27, 30, 81, 84, 693, 696, 699, 890
FokI	GGATG	4 cut(s)	1013, 1070, 1076, 1193
FriOI	GRGCYC	1 cut(s)	621
Fsp4HI	GCNGC	8 cut(s)	27, 30, 81, 84, 693, 696, 699, 890
FspBI	CTAG	7 cut(s)	18, 65, 578, 729, 944, 1283, 1407
FspI	TGCGCA	1 cut(s)	398
GlaI	GCGC	3 cut(s)	119, 398, 787
GluI	GCNGC	8 cut(s)	27, 30, 81, 84, 693, 696, 699, 890
GsaI	CCCAGC	1 cut(s)	918
HaeII	RGCGCY	1 cut(s)	121
HaeIII	GGCC	2 cut(s)	410, 1421
HapII	CCGG	5 cut(s)	256, 389, 689, 739, 1163
HhaI	GCGC	3 cut(s)	120, 399, 788
Hin1II	CATG	7 cut(s)	298, 632, 682, 820, 865, 1028, 1214
Hin6I	GCGC	3 cut(s)	118, 397, 786
HinP1I	GCGC	3 cut(s)	118, 397, 786
HinfI	GANTC	9 cut(s)	47, 600, 752, 1121, 1143, 1167, 1297, 1336, 1454
HpaII	CCGG	5 cut(s)	256, 389, 689, 739, 1163
HphI	GGTGA	6 cut(s)	604, 670, 717, 761, 982, 1035
Hpy166II	GTNNAC	1 cut(s)	272
Hpy188I	TCNGA	5 cut(s)	132, 1200, 1224, 1323, 1354
Hpy188III	TCNNGA	8 cut(s)	92, 203, 239, 799, 1076, 1157, 1289, 1301
Hpy8I	GTNNAC	1 cut(s)	272
HpyAV	CCTTC	8 cut(s)	356, 589, 655, 869, 1050, 1102, 1252, 1430
HpyCH4III	ACNGT	1 cut(s)	559
HpyCH4IV	ACGT	2 cut(s)	510, 1318
HpyCH4V	TGCA	8 cut(s)	265, 606, 635, 892, 953, 1024, 1361, 1393
HpyF10VI	GCNNNNNNNGC	8 cut(s)	23, 50, 80, 210, 335, 625, 698, 704
HpyF3I	CTNAG	6 cut(s)	237, 467, 831, 897, 919, 1353
HpySE526I	ACGT	2 cut(s)	510, 1318
Hsp92II	CATG	7 cut(s)	298, 632, 682, 820, 865, 1028, 1214
HspAI	GCGC	3 cut(s)	118, 397, 786
KroI	GCCGGC	1 cut(s)	688
KroNI	GCCGGC	1 cut(s)	690
Ksp22I	TGATCA	1 cut(s)	97
LguI	GCTCTTC	2 cut(s)	93, 1158
LmnI	GCTCC	4 cut(s)	77, 556, 807, 1042
Lsp1109I	GCAGC	5 cut(s)	13, 16, 70, 92, 876
LweI	GCATC	4 cut(s)	622, 747, 893, 1354
MaeI	CTAG	7 cut(s)	18, 65, 578, 729, 944, 1283, 1407
MaeII	ACGT	2 cut(s)	510, 1318
MaeIII	GTNAC	1 cut(s)	1066
MbiI	CCGCTC	1 cut(s)	53
MfeI	CAATTG	1 cut(s)	1173
MflI	RGATCY	3 cut(s)	258, 425, 709
MhlI	GDGCHC	1 cut(s)	621
MluCI	AATT	3 cut(s)	140, 964, 1173
MlyI	GAGTC	4 cut(s)	1161, 1291, 1330, 1448
Mph1103I	ATGCAT	2 cut(s)	955, 1026
MroNI	GCCGGC	1 cut(s)	688
MroXI	GAANNNNTTC	2 cut(s)	599, 1142
MseI	TTAA	2 cut(s)	183, 1187
MslI	CAYNNNNRTG	2 cut(s)	1209, 1379
MspA1I	CMGCKG	1 cut(s)	83
MspI	CCGG	5 cut(s)	256, 389, 689, 739, 1163
MspR9I	CCNGG	7 cut(s)	147, 364, 377, 739, 740, 1135, 1164
MunI	CAATTG	1 cut(s)	1173
MvaI	CCWGG	4 cut(s)	147, 364, 377, 1135
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	8 cut(s)	23, 50, 80, 210, 335, 625, 698, 704
NaeI	GCCGGC	1 cut(s)	690
NciI	CCSGG	3 cut(s)	739, 740, 1164
NgoMIV	GCCGGC	1 cut(s)	688
NheI	GCTAGC	1 cut(s)	1282
NlaIII	CATG	7 cut(s)	298, 632, 682, 820, 865, 1028, 1214
NlaIV	GGNNCC	2 cut(s)	260, 427
NmuCI	GTSAC	1 cut(s)	1066
NruI	TCGCGA	1 cut(s)	204
NsbI	TGCGCA	1 cut(s)	398
NsiI	ATGCAT	2 cut(s)	955, 1026
NspI	RCATGY	1 cut(s)	1028
PciSI	GCTCTTC	2 cut(s)	93, 1158
PdiI	GCCGGC	1 cut(s)	690
PdmI	GAANNNNTTC	2 cut(s)	599, 1142
PfeI	GAWTC	5 cut(s)	47, 600, 752, 1121, 1143
PkrI	GCNGC	8 cut(s)	28, 31, 82, 85, 694, 697, 700, 891
Ple19I	CGATCG	1 cut(s)	217
PleI	GAGTC	4 cut(s)	1161, 1291, 1330, 1448
PpsI	GAGTC	4 cut(s)	1161, 1291, 1330, 1448
Psp6I	CCWGG	4 cut(s)	145, 362, 375, 1133
PspFI	CCCAGC	1 cut(s)	914
PspGI	CCWGG	4 cut(s)	145, 362, 375, 1133
PspN4I	GGNNCC	2 cut(s)	260, 427
PspPI	GGNCC	2 cut(s)	128, 272
PstI	CTGCAG	2 cut(s)	608, 1363
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	3 cut(s)	258, 425, 709
PvuI	CGATCG	1 cut(s)	217
PvuII	CAGCTG	1 cut(s)	83
RruI	TCGCGA	1 cut(s)	204
RsaI	GTAC	2 cut(s)	160, 976
RsaNI	GTAC	2 cut(s)	159, 975
RseI	CAYNNNNRTG	2 cut(s)	1209, 1379
SapI	GCTCTTC	2 cut(s)	93, 1158
SaqAI	TTAA	2 cut(s)	183, 1187
SatI	GCNGC	8 cut(s)	27, 30, 81, 84, 693, 696, 699, 890
Sau96I	GGNCC	2 cut(s)	128, 272
ScaI	AGTACT	1 cut(s)	976
SchI	GAGTC	4 cut(s)	1161, 1291, 1330, 1448
ScrFI	CCNGG	7 cut(s)	147, 364, 377, 739, 740, 1135, 1164
SduI	GDGCHC	1 cut(s)	621
SfaNI	GCATC	4 cut(s)	622, 747, 893, 1354
SfcI	CTRYAG	3 cut(s)	283, 604, 1359
SinI	GGWCC	2 cut(s)	128, 272
SmaI	CCCGGG	1 cut(s)	740
SmiMI	CAYNNNNRTG	2 cut(s)	1209, 1379
Sse9I	AATT	3 cut(s)	140, 964, 1173
SsiI	CCGC	9 cut(s)	51, 74, 245, 439, 692, 695, 698, 707, 938
SspMI	CTAG	7 cut(s)	18, 65, 578, 729, 944, 1283, 1407
StyD4I	CCNGG	7 cut(s)	145, 362, 375, 737, 738, 1133, 1162
StyI	CCWWGG	3 cut(s)	275, 411, 762
TaaI	ACNGT	1 cut(s)	559
TaiI	ACGT	2 cut(s)	513, 1321
TaqI	TCGA	4 cut(s)	573, 755, 858, 1129
TaqII	GACCGA	1 cut(s)	1270
TasI	AATT	3 cut(s)	140, 964, 1173
TatI	WGTACW	1 cut(s)	974
TauI	GCSGC	3 cut(s)	695, 698, 701
TfiI	GAWTC	5 cut(s)	47, 600, 752, 1121, 1143
Tru1I	TTAA	2 cut(s)	183, 1187
Tru9I	TTAA	2 cut(s)	183, 1187
TscAI	CASTG	1 cut(s)	107
TseFI	GTSAC	1 cut(s)	1066
TseI	GCWGC	5 cut(s)	26, 29, 80, 83, 889
Tsp45I	GTSAC	1 cut(s)	1066
TspDTI	ATGAA	4 cut(s)	667, 1022, 1134, 1455
TspGWI	ACGGA	1 cut(s)	1120
TspMI	CCCGGG	1 cut(s)	738
TspRI	CASTG	1 cut(s)	107
VpaK11BI	GGWCC	2 cut(s)	128, 272
XapI	RAATTY	1 cut(s)	140
XceI	RCATGY	1 cut(s)	1028
XcmI	CCANNNNNNNNNTGG	1 cut(s)	301
XmaI	CCCGGG	1 cut(s)	738
XmnI	GAANNNNTTC	2 cut(s)	599, 1142
XspI	CTAG	7 cut(s)	18, 65, 578, 729, 944, 1283, 1407
ZrmI	AGTACT	1 cut(s)	976
Zsp2I	ATGCAT	2 cut(s)	955, 1026

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.