Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008075

Physical Location & Seq

Genomic Coordinates Reverse (-)

1483666 .. 1489840

Gene Structure 6175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0006800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGTTCTACTCGCACACAATCTTGGCTCGGAAGGGCCCATTGGGAACCGTATGGTGCGCTGCCCATCTGCAGCACAGACTCAAGAAGTCCCATTACGCCGCCACCGACATCCCCTCCACCGTCGATCGCATCATGTTTCCCGAGGTTCCTATTGCACTCAGAATGTCAGGGCACCTCCTACTAGGGGTTGTTCGGATTTACTCAAAGAAAGTCGAGTATCTTCACCAGGACTGTAACGTTGTATTGAATGGCCTCAAAAAGGCCTTTGCTTCTATAGACCTGAGCTTGCCAGAGAACGCAATGCAAGCACCGCTTCAGTCTATCACTTTGCCTGAAACATTATGCCTTGATGCTTTGGATTGCGGTCCCGACTTTGATTATGACGGGGCTCACAATGATCATCTAGGGAATCAGGAGGATATCACGTTAACAGAACAATTTCCCATTGCAACAAACCCTTATGTTGCTATAACTTTTGATGAGGATATCCGGATGGAGGATCTATCGCATCAATTAGAGGATTTTGGTTCACATGTTACCCCTATGGATGTGGACACCATCCCCCCACATCCGGAACAGGGTACTCATAGTCCGGTCAATCTGACAGATGAACGAACAATACATAATGACGAGGTAAACCTTCAAGGTTCTCAAGGAATTTCTGGTGTTCCTAGCCTGACAGACGAACAACGGAGGCCTAGCGATGATTTTACCCTTCCAGACTGTCCAGAAACAGAGACTCAGAAGGATTTTGGATGTCAAGATTCTGGACCAAGTCAGCCTACAGAAATTCTCAATTTGAGCCATAGAGACTACAGTTCCCCAGAAAATGTTCCTGAAATAGAAGCTCAACGCAATGCAGTTTCTGATATTAGCTTAGAAACCTTTCCATTTTCTTCCAGTCATAAGAATGATGTTACTGAACCACATGACCCACCAACAAATGAGAAAGCCATTCTTTCTCCAATTATGGAGGGAAGTACACATTCTGTTGGGCCATCTCCAGCGGTCCAGCCACGTTCAGAAACACCAGCTTCTGTTGCTTCTTTGTCAGAGGGCCGACAGTACATTAATACATCTGTTTCAGTTGCAATCCAATCAACACCTCGTATTGAACAGCCACCTCTTGAACAGCCACTTATTGAGCAGCCAAGACCAAGGAAAAGAAAAAAGCAGTACTTTGATGATCCTGTTGTATTATCTAATAAGTTTATTGGGAAGAGACTTAAAGATGCCAGTGATATAATCCGCAAAAGGAAGAAACTTCCGTCCTCTGCATTGGGTATTTGGAAGTTGAAAAACGTTTTAAGAAAGGAACAAGTGTTCCTTCAGCCTTCATTAACCGGGTTGTGCTCTGATCTTAGTAACATTTACGACAAAACATACATATCTACAAAATCCCATTTGTTTGAGGAAGCTCTTCCAGATCCTAGGCCAACGTCTCCTTCTCCCACAACCGAAGTGGTCTCAGAAGATGGGGCTGCAGTGCCTCCTCTTCCTCCTTTCTCTCCTGTTACAATTGATGTCTCCCCAGAGCACGGAGTTGGTGACTCTGTCCCTGCCAATGAATCTTCCCCAGTGAAGGGTCTACAATCCCCTTCTTCTCCTGCAACTGGGTGTGGCCAAGACGCTGAACAATTTAGAGGTGTCGAACATGATGGGGTTTTACCCGATTCGCCTACAATCAAGCGTTCTCTGATGATAGATGACTTTACTCCTGCCCCATCACCAAAAGTGGGATCAGCTTCAGTTCATTCATTGGAAATAAATACCGGAACTCAAATACTGCAGACACCAGATTTACAAGTGTCAGCTGGATCTGAATTTGGAACACCGACAATGTTAGGAGAGGGGGGAGTACATCCTGATTACACTGTTCCTTCACATAACCCTGAGTCAATGACTGCAGAAGCAGAAGATCTTTGGTTTCTGGAAGCAGATGATCGTACACCAGCTGGTTCTCAAGGGACAGAAGGAGTTGATTCATTGTCGGTCAGAACCAGGGCTGTAGCTCAATATTTGAAAAGCCAATCTCCAGAAGACCTATCCAGTGATCTCAGCTTGAACAAAATTTTAGAAGGAAAAAGAAGAAAGCTATGTGCTCGAATGTTCTTTGAAACACTGGTCTTGAAGAGTTATGATCTTATTGATGTAAAACAAGAAGTCCCTTATGGTGACATTAGTTTGAAGTTGACTCAAACCCTCTCAAAGGCTCAAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

740

Amino Acids

81.04

Weight (kDa)

4.95

Isoelectric Point (pI)

60.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 100	5.2e-37	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	685 - 732	5.1e-18	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52110 AT3G52110 AT3G52110 AT3G52110
fragaria_vesca	FvH4_7g00980 FvH4_7g00980 FvH4_7g00980
malus_domestica	MD02G1313000.v1.1 MD07G1009400.v1.1
prunus_persica	Prupe.2G012400_v2.0.a1 Prupe.2G012400_v2.0.a1
pyrus_communis	pycom02g26260 pycom07g00840
rosa_chinensis	RchiOBHm_Chr1g0315881
rosa_laevigata	RLG00000030726
rosa_multiflora	Rmu_sc0012813.1_g000008 Rmu_ssc0000154.1_g000015
rosa_roxburghii	Rroxscaffold_4G00331350
rosa_rugosa	Rorug01G0006800
rosa_samantha	Rh1AG017500 Rh1BG010000 Rh1CG014800 Rh1DG010400
rosa_wichuraiana	Rw1G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	1588
AccIII	TCCGGA	2 cut(s)	489, 571
AciI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
AclI	AACGTT	2 cut(s)	237, 1302
AclWI	GGATC	5 cut(s)	507, 1181, 1421, 1747, 1825
AcoI	YGGCCR	1 cut(s)	1621
AcsI	RAATTY	4 cut(s)	657, 789, 1823, 2070
AcuI	CTGAAG	3 cut(s)	299, 1313, 1731
AfaI	GTAC	6 cut(s)	583, 982, 1067, 1178, 1860, 1948
AflIII	ACRYGT	1 cut(s)	532
AjnI	CCWGG	2 cut(s)	225, 2000
AjuI	GAANNNNNNNTTGG	4 cut(s)	23, 55, 1429, 1461
AloI	GAACNNNNNNTCC	4 cut(s)	1307, 1308, 1339, 1340
Alw21I	GWGCWC	3 cut(s)	1355, 1539, 2104
Alw26I	GTCTC	6 cut(s)	731, 804, 1216, 1446, 1471, 1531
AlwI	GGATC	5 cut(s)	507, 1181, 1421, 1747, 1825
AlwNI	CAGNNNCTG	2 cut(s)	866, 1037
Ama87I	CYCGRG	1 cut(s)	140
Aor13HI	TCCGGA	2 cut(s)	489, 571
AoxI	GGCC	8 cut(s)	34, 250, 261, 695, 995, 1057, 1433, 1621
ApaI	GGGCCC	1 cut(s)	38
ApeKI	GCWGC	4 cut(s)	59, 70, 1147, 1481
ApoI	RAATTY	4 cut(s)	657, 789, 1823, 2070
AseI	ATTAAT	1 cut(s)	1071
Asp700I	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
AspA2I	CCTAGG	1 cut(s)	1430
AspLEI	GCGC	1 cut(s)	59
AspS9I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
AsuC2I	CCSGG	1 cut(s)	1345
AsuHPI	GGTGA	4 cut(s)	215, 1559, 1719, 2186
AvaI	CYCGRG	1 cut(s)	140
AvaII	GGWCC	3 cut(s)	365, 770, 1009
AvrII	CCTAGG	1 cut(s)	1430
BaeGI	GKGCMC	2 cut(s)	38, 174
BalI	TGGCCA	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	171
BanII	GRGCYC	2 cut(s)	38, 391
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
BbsI	GAAGAC	1 cut(s)	2046
Bbv12I	GWGCWC	3 cut(s)	1355, 1539, 2104
BbvI	GCAGC	4 cut(s)	46, 82, 1159, 1468
BccI	CCATC	7 cut(s)	72, 487, 566, 1006, 1469, 1652, 1732
BciT130I	CCWGG	2 cut(s)	227, 2002
BclI	TGATCA	1 cut(s)	397
BcnI	CCSGG	1 cut(s)	1345
BcoDI	GTCTC	6 cut(s)	731, 804, 1216, 1446, 1471, 1531
BfaI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
BfmI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1905, 2007
BglII	AGATCT	1 cut(s)	1918
BisI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
BlnI	CCTAGG	1 cut(s)	1430
BlsI	GCNGC	5 cut(s)	61, 72, 100, 1149, 1483
BmcAI	AGTACT	1 cut(s)	1178
Bme1390I	CCNGG	3 cut(s)	227, 1345, 2002
Bme18I	GGWCC	3 cut(s)	365, 770, 1009
BmeT110I	CYCGRG	1 cut(s)	140
BmgT120I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
BmiI	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
BmrFI	CCNGG	3 cut(s)	227, 1345, 2002
BmrI	ACTGGG	2 cut(s)	1571, 1623
BmsI	GCATC	4 cut(s)	138, 340, 517, 1222
BmuI	ACTGGG	2 cut(s)	1571, 1623
BpiI	GAAGAC	1 cut(s)	2046
BpmI	CTGGAG	2 cut(s)	987, 2019
Bpu10I	CCTNAGC	1 cut(s)	281
BpuEI	CTTGAG	3 cut(s)	65, 636, 1947
BpuMI	CCSGG	1 cut(s)	1345
BsaI	GGTCTC	1 cut(s)	1471
BsaJI	CCNNGG	4 cut(s)	141, 1157, 1430, 2001
BsaWI	WCCGGW	4 cut(s)	489, 571, 592, 1772
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bse1I	ACTGG	6 cut(s)	900, 1236, 1577, 1618, 2049, 2127
Bse3DI	GCAATG	3 cut(s)	306, 444, 862
BseAI	TCCGGA	2 cut(s)	489, 571
BseBI	CCWGG	2 cut(s)	227, 2002
BseDI	CCNNGG	4 cut(s)	141, 1157, 1430, 2001
BseGI	GGATG	7 cut(s)	108, 498, 553, 558, 568, 761, 1861
BseMI	GCAATG	3 cut(s)	306, 444, 862
BseMII	CTCAG	6 cut(s)	172, 272, 755, 1482, 1884, 2071
BseNI	ACTGG	6 cut(s)	900, 1236, 1577, 1618, 2049, 2127
BseRI	GAGGAG	1 cut(s)	1482
BseSI	GKGCMC	2 cut(s)	38, 174
BseXI	GCAGC	4 cut(s)	46, 82, 1159, 1468
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BshNI	GGYRCC	1 cut(s)	171
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	3 cut(s)	1355, 1539, 2104
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	5 cut(s)	490, 572, 593, 1344, 1773
BslFI	GGGAC	5 cut(s)	73, 351, 1541, 1981, 2150
BsmAI	GTCTC	6 cut(s)	731, 804, 1216, 1446, 1471, 1531
BsmBI	CGTCTC	1 cut(s)	1446
BsmFI	GGGAC	5 cut(s)	73, 351, 1541, 1981, 2150
BsnI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
Bso31I	GGTCTC	1 cut(s)	1471
BsoBI	CYCGRG	1 cut(s)	140
Bsp120I	GGGCCC	1 cut(s)	34
Bsp1286I	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2104
Bsp13I	TCCGGA	2 cut(s)	489, 571
BspACI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
BspANI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BspCNI	CTCAG	6 cut(s)	171, 273, 754, 1481, 1885, 2070
BspEI	TCCGGA	2 cut(s)	489, 571
BspLI	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
BspMAI	CTGCAG	4 cut(s)	72, 1486, 1791, 1909
BspPI	GGATC	5 cut(s)	507, 1181, 1421, 1747, 1825
BspQI	GCTCTTC	1 cut(s)	1425
BspT107I	GGYRCC	1 cut(s)	171
BspTNI	GGTCTC	1 cut(s)	1471
BsrDI	GCAATG	3 cut(s)	306, 444, 862
BsrI	ACTGG	6 cut(s)	900, 1236, 1577, 1618, 2049, 2127
BssECI	CCNNGG	4 cut(s)	141, 1157, 1430, 2001
BssT1I	CCWWGG	2 cut(s)	1157, 1430
Bst2UI	CCWGG	2 cut(s)	227, 2002
Bst4CI	ACNGT	7 cut(s)	49, 121, 233, 725, 818, 1065, 1876
Bst6I	CTCTTC	4 cut(s)	1214, 1425, 1500, 2126
BstC8I	GCNNGC	2 cut(s)	287, 306
BstDEI	CTNAG	8 cut(s)	158, 281, 741, 877, 1361, 1468, 1893, 2057
BstENI	CCTNNNNNAGG	2 cut(s)	257, 2207
BstF5I	GGATG	7 cut(s)	108, 498, 553, 558, 568, 761, 1861
BstHHI	GCGC	1 cut(s)	59
BstMAI	GTCTC	6 cut(s)	731, 804, 1216, 1446, 1471, 1531
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
BstNI	CCWGG	2 cut(s)	227, 2002
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	3 cut(s)	225, 1343, 2000
BstSFI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1905, 2007
BstSLI	GKGCMC	2 cut(s)	38, 174
BstV1I	GCAGC	4 cut(s)	46, 82, 1159, 1468
BstV2I	GAAGAC	1 cut(s)	2046
BstX2I	RGATCY	4 cut(s)	499, 1426, 1817, 1918
BstYI	RGATCY	4 cut(s)	499, 1426, 1817, 1918
BsuRI	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	7 cut(s)	108, 498, 553, 558, 568, 761, 1861
BtsI	GCAGTG	1 cut(s)	1491
BtsIMutI	CAGTG	6 cut(s)	1243, 1491, 1584, 1872, 2056, 2120
Cac8I	GCNNGC	2 cut(s)	287, 306
CaiI	CAGNNNCTG	2 cut(s)	866, 1037
CfoI	GCGC	1 cut(s)	59
Cfr13I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
CseI	GACGC	1 cut(s)	1637
Csp6I	GTAC	6 cut(s)	582, 981, 1066, 1177, 1859, 1947
CspCI	CAANNNNNGTGG	2 cut(s)	1443, 1478
CviAII	CATG	4 cut(s)	133, 533, 929, 1655
CviQI	GTAC	6 cut(s)	582, 981, 1066, 1177, 1859, 1947
DdeI	CTNAG	8 cut(s)	158, 281, 741, 877, 1361, 1468, 1893, 2057
EaeI	YGGCCR	1 cut(s)	1621
Eam1104I	CTCTTC	4 cut(s)	1214, 1425, 1500, 2126
EarI	CTCTTC	4 cut(s)	1214, 1425, 1500, 2126
Eco130I	CCWWGG	2 cut(s)	1157, 1430
Eco147I	AGGCCT	2 cut(s)	263, 697
Eco24I	GRGCYC	2 cut(s)	38, 391
Eco31I	GGTCTC	1 cut(s)	1471
Eco32I	GATATC	2 cut(s)	421, 487
Eco47I	GGWCC	3 cut(s)	365, 770, 1009
Eco57I	CTGAAG	3 cut(s)	299, 1313, 1731
Eco88I	CYCGRG	1 cut(s)	140
EcoNI	CCTNNNNNAGG	2 cut(s)	257, 2207
EcoO109I	RGGNCCY	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	225, 2000
EcoRV	GATATC	2 cut(s)	421, 487
EcoT14I	CCWWGG	2 cut(s)	1157, 1430
EcoT38I	GRGCYC	2 cut(s)	38, 391
ErhI	CCWWGG	2 cut(s)	1157, 1430
Esp3I	CGTCTC	1 cut(s)	1446
FaeI	CATG	4 cut(s)	136, 536, 932, 1658
FalI	AAGNNNNNCTT	8 cut(s)	297, 329, 942, 974, 1163, 1195, 1311, 1343
FaqI	GGGAC	5 cut(s)	73, 351, 1541, 1981, 2150
FatI	CATG	4 cut(s)	132, 532, 928, 1654
FbaI	TGATCA	1 cut(s)	397
FblI	GTMKAC	1 cut(s)	1588
Fnu4HI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
FokI	GGATG	7 cut(s)	95, 505, 545, 555, 560, 768, 1848
FriOI	GRGCYC	2 cut(s)	38, 391
Fsp4HI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
FspBI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
GlaI	GCGC	1 cut(s)	58
GluI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
GsuI	CTGGAG	2 cut(s)	987, 2019
HaeIII	GGCC	8 cut(s)	36, 252, 263, 697, 997, 1059, 1435, 1623
HapII	CCGG	5 cut(s)	490, 572, 593, 1344, 1773
HgaI	GACGC	1 cut(s)	1637
HhaI	GCGC	1 cut(s)	59
Hin1II	CATG	4 cut(s)	136, 536, 932, 1658
Hin6I	GCGC	1 cut(s)	57
HinP1I	GCGC	1 cut(s)	57
HincII	GTYRAC	2 cut(s)	429, 2193
HindII	GTYRAC	2 cut(s)	429, 2193
HpaI	GTTAAC	1 cut(s)	429
HpaII	CCGG	5 cut(s)	490, 572, 593, 1344, 1773
HphI	GGTGA	4 cut(s)	215, 1559, 1719, 2186
Hpy166II	GTNNAC	8 cut(s)	429, 530, 553, 637, 983, 1589, 1949, 2193
Hpy8I	GTNNAC	8 cut(s)	429, 530, 553, 637, 983, 1589, 1949, 2193
Hpy99I	CGWCG	1 cut(s)	125
HpyCH4III	ACNGT	7 cut(s)	49, 121, 233, 725, 818, 1065, 1876
HpyCH4IV	ACGT	5 cut(s)	237, 425, 1018, 1302, 1439
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
HpyF3I	CTNAG	8 cut(s)	158, 281, 741, 877, 1361, 1468, 1893, 2057
HpySE526I	ACGT	5 cut(s)	237, 425, 1018, 1302, 1439
Hsp92II	CATG	4 cut(s)	136, 536, 932, 1658
HspAI	GCGC	1 cut(s)	57
Kpn2I	TCCGGA	2 cut(s)	489, 571
Ksp22I	TGATCA	1 cut(s)	397
KspAI	GTTAAC	1 cut(s)	429
LguI	GCTCTTC	1 cut(s)	1425
Lsp1109I	GCAGC	4 cut(s)	46, 82, 1159, 1468
LweI	GCATC	4 cut(s)	138, 340, 517, 1222
MaeI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
MaeII	ACGT	5 cut(s)	237, 425, 1018, 1302, 1439
MaeIII	GTNAC	7 cut(s)	233, 535, 916, 1364, 1513, 1547, 2174
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	4 cut(s)	499, 1426, 1817, 1918
MhlI	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2104
MlsI	TGGCCA	1 cut(s)	1623
MluNI	TGGCCA	1 cut(s)	1623
MlyI	GAGTC	5 cut(s)	72, 733, 1544, 1904, 2188
Mox20I	TGGCCA	1 cut(s)	1623
MroI	TCCGGA	2 cut(s)	489, 571
MroXI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
MscI	TGGCCA	1 cut(s)	1623
MseI	TTAA	5 cut(s)	428, 1071, 1227, 1307, 1340
MslI	CAYNNNNRTG	1 cut(s)	909
Msp20I	TGGCCA	1 cut(s)	1623
MspA1I	CMGCKG	3 cut(s)	1007, 1814, 1955
MspI	CCGG	5 cut(s)	490, 572, 593, 1344, 1773
MspR9I	CCNGG	3 cut(s)	227, 1345, 2002
MunI	CAATTG	1 cut(s)	1518
MvaI	CCWGG	2 cut(s)	227, 2002
MwoI	GCNNNNNNNGC	3 cut(s)	305, 310, 1040
NciI	CCSGG	1 cut(s)	1345
NlaIII	CATG	4 cut(s)	136, 536, 932, 1658
NlaIV	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
NmuCI	GTSAC	2 cut(s)	1547, 2174
NspI	RCATGY	1 cut(s)	536
PceI	AGGCCT	2 cut(s)	263, 697
PciI	ACATGT	1 cut(s)	532
PciSI	GCTCTTC	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdmI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
PfeI	GAWTC	5 cut(s)	409, 764, 1568, 1673, 1982
PflFI	GACNNNGTC	2 cut(s)	774, 1553
PkrI	GCNGC	5 cut(s)	61, 72, 100, 1149, 1483
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	5 cut(s)	72, 733, 1544, 1903, 2188
PpsI	GAGTC	5 cut(s)	72, 733, 1544, 1903, 2188
PscI	ACATGT	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1071
Psp1406I	AACGTT	2 cut(s)	237, 1302
Psp6I	CCWGG	2 cut(s)	225, 2000
PspGI	CCWGG	2 cut(s)	225, 2000
PspN4I	GGNNCC	5 cut(s)	36, 46, 147, 173, 367
PspOMI	GGGCCC	1 cut(s)	34
PspPI	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
PsrI	GAACNNNNNNTAC	2 cut(s)	603, 635
PstI	CTGCAG	4 cut(s)	72, 1486, 1791, 1909
PstNI	CAGNNNCTG	2 cut(s)	866, 1037
PsuI	RGATCY	4 cut(s)	499, 1426, 1817, 1918
PsyI	GACNNNGTC	2 cut(s)	774, 1553
PvuI	CGATCG	1 cut(s)	127
PvuII	CAGCTG	2 cut(s)	1814, 1955
RsaI	GTAC	6 cut(s)	583, 982, 1067, 1178, 1860, 1948
RsaNI	GTAC	6 cut(s)	582, 981, 1066, 1177, 1859, 1947
RseI	CAYNNNNRTG	1 cut(s)	909
SapI	GCTCTTC	1 cut(s)	1425
SaqAI	TTAA	5 cut(s)	428, 1071, 1227, 1307, 1340
SatI	GCNGC	5 cut(s)	60, 71, 99, 1148, 1482
Sau96I	GGNCC	7 cut(s)	34, 35, 365, 770, 995, 1009, 1057
ScaI	AGTACT	1 cut(s)	1178
SchI	GAGTC	5 cut(s)	72, 733, 1544, 1904, 2188
ScrFI	CCNGG	3 cut(s)	227, 1345, 2002
SduI	GDGCHC	6 cut(s)	38, 174, 391, 1355, 1539, 2104
SfaNI	GCATC	4 cut(s)	138, 340, 517, 1222
SfcI	CTRYAG	8 cut(s)	68, 273, 783, 814, 1482, 1787, 1905, 2007
SinI	GGWCC	3 cut(s)	365, 770, 1009
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	3 cut(s)	80, 651, 1962
SmoI	CTYRAG	3 cut(s)	80, 651, 1962
SseBI	AGGCCT	2 cut(s)	263, 697
SsiI	CCGC	5 cut(s)	99, 311, 363, 1007, 1249
SspI	AATATT	1 cut(s)	2018
SspMI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
StuI	AGGCCT	2 cut(s)	263, 697
StyD4I	CCNGG	3 cut(s)	225, 1343, 2000
StyI	CCWWGG	2 cut(s)	1157, 1430
TaaI	ACNGT	7 cut(s)	49, 121, 233, 725, 818, 1065, 1876
TaiI	ACGT	5 cut(s)	240, 428, 1021, 1305, 1442
TaqI	TCGA	4 cut(s)	123, 213, 1650, 2104
TaqII	GACCGA	1 cut(s)	1981
TatI	WGTACW	4 cut(s)	980, 1065, 1176, 1858
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	5 cut(s)	409, 764, 1568, 1673, 1982
Tru1I	TTAA	5 cut(s)	428, 1071, 1227, 1307, 1340
Tru9I	TTAA	5 cut(s)	428, 1071, 1227, 1307, 1340
TscAI	CASTG	6 cut(s)	1243, 1491, 1584, 1879, 2056, 2127
TseFI	GTSAC	2 cut(s)	1547, 2174
TseI	GCWGC	4 cut(s)	59, 70, 1147, 1481
Tsp45I	GTSAC	2 cut(s)	1547, 2174
TspDTI	ATGAA	6 cut(s)	624, 1326, 1581, 1742, 1746, 1974
TspGWI	ACGGA	3 cut(s)	706, 1257, 1554
TspRI	CASTG	6 cut(s)	1243, 1491, 1584, 1879, 2056, 2127
Tth111I	GACNNNGTC	2 cut(s)	774, 1553
VpaK11BI	GGWCC	3 cut(s)	365, 770, 1009
VspI	ATTAAT	1 cut(s)	1071
XagI	CCTNNNNNAGG	2 cut(s)	257, 2207
XapI	RAATTY	4 cut(s)	657, 789, 1823, 2070
XceI	RCATGY	1 cut(s)	536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmaJI	CCTAGG	1 cut(s)	1430
XmiI	GTMKAC	1 cut(s)	1588
XmnI	GAANNNNTTC	4 cut(s)	438, 831, 885, 1419
XspI	CTAG	5 cut(s)	182, 404, 672, 699, 1431
ZrmI	AGTACT	1 cut(s)	1178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.