Rorug01G0028800

Small nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0006603
Physical Location & Seq
Forward (+)
4891992 .. 4895211
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0028800.1

Sequence Viewer

Length: 2415 bp
ATGTTTTCCCTTTTCTTCTTGTGCCTATGTCTCAAGTCCTACATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACCAAACAATTGTTTCAGCTGGTGAGAAATTTGAACTGGGTTTCTTCAAGGCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGAAACTAGTACCAGAGCAAACCATAGTCTGGGTGGCCAATAGGGTGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATCTCAGATGGTAATTTGGTACTGTTTAAGTCCAAAACCCCAATTTGGTCCACAGATGTCAGTTCAAGTTCAGCTTCTTCTATACATGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTTTGCCTTTATGGCAAAGTTTTGATCAACCAGCCCATACTTTTCTACCAGAAAGCAAAATTGGGTTCAACAATGTTACAAAGCGAACTCAAGTCCTGACTTCATGGAAGAATTCTGAGGATCCTTCACCTGGTCAATTCTCTCTTGAGCTAGACCCGACGAGCAAGTCATATATTATAAAGTGGAATAGGTCTCAACAGTATTGGACAAGTGGACTTTGGGATCAAAACAGACATGTGTTCAGTTTGAGTCCCGAGATGAGGCACTATATCTACAATTTCAGCTATGTTACAAACGAAAATGAGAGCTACTTCACCTATACTCTTTATGATGCTAGCATCACATCTCGAATAATAATGGATGTATCGGGTCAGGTTCAGCAACTGTCCTGGTTGCACTCTCAGGGATGGTACTTGTTTTGGTCTCGACCAAGGAAACAATGTGATGTTTATGGTGTGTGTGGGCCATTTAGTAGTTGCAGTGAGAAATCCTTGCCCTTCTGTAATTGTTTGAATGGTTTTGAACCGAAATTGAAGGTGGGTTGGGATTTGCAGGATTACTCTCTAGGGTGTTCAAGAAAAACCAGGCTGCAGTGTGGAAATGTTACTGGTGTTGATGGAATGAGTGACCAGTTTATAGAAATGTCTAGCAGGCTATCATCCGCAGATATACAGTTTCAGAATTTGACTTATGTTTATAGTATGGAAGACTGTGAATCAATTTGCTTAAATGATTGCAATTGCACTGCTTATGGTTATAGCAGCTCTTCTTCTGAATGTTCAACTTGGAAAGGAGATCTGTGGGCGGATGAAAATGGAAGAACTTTATACATCAGAATACCAGCTTCTGATCCCACAAGTAGAAAGCGAACCATTGTAATTGCAACAGTCTCAGCAACAGCAGGGTTGCTTACAATAGTTTTTGGCTATTTTTTATGGAAGAATACTTTGGGAAAGAGAAGTGAAACTATAAAGAATCTTAGCGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATTCAGTTTAAGGAGTATATTAGTGGCTACTAATAACTTCTCTGAAGCAAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGACTATCAAAGAAGTCCGGGCAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTCAGACTCTTGGGTTGCTGCATTGAAGCAGAGGAAATGATATTGATGTATGAGTACATGCCAAATCGAAGTTTGGACAAATTTTTGTTTGATCCATCCGAAAAGACAAAATTGGATTGGGGTAGACGTTTTAGAATTATAGAAGGTATAGCTCAAGGATTGCTTTATATCCACAAGTACTCAAGATTAAAAATCATTCACAGGGATCTAAAAGCAAGTAATATTCTATTGGATGGAACAATGAACCCTAAGATTTCTGACTTTGGAATGGCAAAGATTTTTGACATAAATCAAACTCAAGCAAATACTAACAGGGTTGTTGGGACCTACGGCTACATGTCACCTGAGTATGCACGCTATGGTCATTTCTCTGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAGAAGAATGCTATTTTCCATCGTTTTGAACGTTCACCAACTCTCGCTGGATGGGCATGGGACCTATGGAAAGAAGGAAGGGGAATGGAGGTGATTGATGCATCAATAAGGGAAACATTTTGGGCTCATGAAGCTTTAAGGTGTATCCATGTAGGACTTCTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCGTCAGTAATTCACATGTTGCAGGGAAATGAAGCTACATCTCTTCCACCCACCAAAGAACCTGCTTTTTCAACACAGAAGAATTTCAGTGCTATTGGTTCTTCTTCTCAAAGGTCTACCAATTATTCAAACAATGCACTCACGATTAGTTTGCCAGAAGCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
LSM

Protein Analysis

804

Amino Acids

90.74

Weight (kDa)

7.74

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 69 - 169 5.8e-29 D-mannose binding lectin
S_locus_glycop PF00954 201 - 309 5.6e-28 S-locus glycoprotein domain
PAN_2 PF08276 341 - 399 4.1e-09 PAN-like domain
Pkinase PF00069 486 - 685 5.1e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 488 - 754 2e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 575, 1500
AasI GACNNNNNNGTC 1 cut(s) 562
Acc36I ACCTGC 3 cut(s) 134, 2248, 2317
AccB7I CCANNNNNTGG 1 cut(s) 213
AccI GTMKAC 2 cut(s) 1747, 2363
AciI CCGC 2 cut(s) 1059, 1202
AclI AACGTT 1 cut(s) 2080
AclWI GGATC 6 cut(s) 512, 525, 627, 1241, 1709, 1836
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 5 cut(s) 119, 508, 1078, 1703, 2329
AcuI CTGAAG 2 cut(s) 240, 1479
AcyI GRCGYC 1 cut(s) 2249
AfaI GTAC 6 cut(s) 179, 195, 288, 809, 1679, 1802
AfeI AGCGCT 1 cut(s) 1381
AfiI CCNNNNNNNGG 4 cut(s) 213, 312, 527, 657
AflIII ACRYGT 4 cut(s) 352, 631, 1959, 2262
AhlI ACTAGT 1 cut(s) 190
AjnI CCWGG 3 cut(s) 526, 785, 980
AjuI GAANNNNNNNTTGG 4 cut(s) 441, 473, 1328, 1360
Alw26I GTCTC 6 cut(s) 35, 84, 244, 594, 825, 1291
AlwI GGATC 6 cut(s) 512, 525, 627, 1241, 1709, 1836
AlwNI CAGNNNCTG 3 cut(s) 242, 781, 1244
Ama87I CYCGRG 1 cut(s) 650
Aor51HI AGCGCT 1 cut(s) 1381
AoxI GGCC 3 cut(s) 219, 860, 1489
ApeKI GCWGC 6 cut(s) 232, 985, 1158, 1382, 1641, 2228
ApoI RAATTY 5 cut(s) 119, 508, 1078, 1703, 2329
Asp700I GAANNNNTTC 1 cut(s) 2330
AspLEI GCGC 1 cut(s) 1382
AspS9I GGNCC 5 cut(s) 315, 860, 1490, 1947, 2110
AsuC2I CCSGG 1 cut(s) 1558
AsuHPI GGTGA 7 cut(s) 101, 125, 516, 703, 1956, 2076, 2152
AsuNHI GCTAGC 1 cut(s) 731
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 3 cut(s) 315, 1947, 2110
BalI TGGCCA 1 cut(s) 221
BamHI GGATCC 1 cut(s) 517
BanII GRGCYC 1 cut(s) 2176
BbsI GAAGAC 1 cut(s) 1110
BbvI GCAGC 6 cut(s) 244, 972, 1170, 1369, 1628, 2240
BccI CCATC 8 cut(s) 71, 269, 798, 1007, 1726, 1850, 2076, 2094
BceAI ACGGC 1 cut(s) 1969
BcgI CGANNNNNNTGC 2 cut(s) 2380, 2414
BciT130I CCWGG 3 cut(s) 528, 787, 982
BciVI GTATCC 1 cut(s) 2204
BclI TGATCA 1 cut(s) 421
BcnI CCSGG 1 cut(s) 1558
BcoDI GTCTC 6 cut(s) 35, 84, 244, 594, 825, 1291
BcuI ACTAGT 1 cut(s) 190
BfaI CTAG 6 cut(s) 191, 548, 732, 962, 1044, 1472
BfmI CTRYAG 2 cut(s) 986, 2226
BfoI RGCGCY 1 cut(s) 1383
BfuAI ACCTGC 3 cut(s) 134, 2248, 2317
BfuI GTATCC 1 cut(s) 2204
BglI GCCNNNNNGGC 1 cut(s) 409
BglII AGATCT 1 cut(s) 1192
BisI GCNGC 6 cut(s) 233, 986, 1159, 1383, 1642, 2229
BlsI GCNGC 6 cut(s) 234, 987, 1160, 1384, 1643, 2230
BmcAI AGTACT 1 cut(s) 1802
Bme1390I CCNGG 4 cut(s) 528, 787, 982, 1558
Bme18I GGWCC 3 cut(s) 315, 1947, 2110
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 5 cut(s) 315, 860, 1490, 1947, 2110
BmiI GGNNCC 3 cut(s) 519, 1948, 2111
BmrFI CCNGG 4 cut(s) 528, 787, 982, 1558
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 4 cut(s) 718, 744, 2137, 2159
BmtI GCTAGC 1 cut(s) 735
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 1110
BpuEI CTTGAG 6 cut(s) 17, 471, 563, 1761, 1789, 1905
BpuMI CCSGG 1 cut(s) 1558
BsaHI GRCGYC 1 cut(s) 2249
BsaI GGTCTC 2 cut(s) 594, 825
BsaJI CCNNGG 1 cut(s) 827
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 312, 527, 657
Bse1I ACTGG 5 cut(s) 76, 132, 236, 1009, 1027
Bse3DI GCAATG 1 cut(s) 2250
BseBI CCWGG 3 cut(s) 528, 787, 982
BseDI CCNNGG 1 cut(s) 827
BseGI GGATG 7 cut(s) 763, 809, 1055, 1210, 1718, 1861, 2105
BseLI CCNNNNNNNGG 4 cut(s) 213, 312, 527, 657
BseMI GCAATG 1 cut(s) 2250
BseMII CTCAG 6 cut(s) 285, 504, 812, 1302, 1959, 1986
BseNI ACTGG 5 cut(s) 76, 132, 236, 1009, 1027
BseXI GCAGC 6 cut(s) 244, 972, 1170, 1369, 1628, 2240
BseYI CCCAGC 1 cut(s) 392
BsgI GTGCAG 1 cut(s) 251
BshFI GGCC 3 cut(s) 221, 862, 1491
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 1 cut(s) 1557
BslFI GGGAC 3 cut(s) 633, 1960, 2123
BslI CCNNNNNNNGG 4 cut(s) 213, 312, 527, 657
BsmAI GTCTC 6 cut(s) 35, 84, 244, 594, 825, 1291
BsmFI GGGAC 3 cut(s) 633, 1960, 2123
BsmI GAATGC 1 cut(s) 2062
BsnI GGCC 3 cut(s) 221, 862, 1491
Bso31I GGTCTC 2 cut(s) 594, 825
BsoBI CYCGRG 1 cut(s) 650
Bsp1286I GDGCHC 1 cut(s) 2176
Bsp143I GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
BspACI CCGC 2 cut(s) 1059, 1202
BspANI GGCC 3 cut(s) 221, 862, 1491
BspCNI CTCAG 6 cut(s) 284, 505, 811, 1301, 1960, 1987
BspHI TCATGA 2 cut(s) 1578, 2176
BspLI GGNNCC 3 cut(s) 519, 1948, 2111
BspMAI CTGCAG 2 cut(s) 990, 2230
BspMI ACCTGC 3 cut(s) 134, 2248, 2317
BspOI GCTAGC 1 cut(s) 735
BspPI GGATC 6 cut(s) 512, 525, 627, 1241, 1709, 1836
BspQI GCTCTTC 1 cut(s) 1168
BspTNI GGTCTC 2 cut(s) 594, 825
BsrDI GCAATG 1 cut(s) 2250
BsrI ACTGG 5 cut(s) 76, 132, 236, 1009, 1027
BssECI CCNNGG 1 cut(s) 827
BssMI GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
BssNI GRCGYC 1 cut(s) 2249
BssT1I CCWWGG 1 cut(s) 827
Bst2UI CCWGG 3 cut(s) 528, 787, 982
Bst4CI ACNGT 6 cut(s) 291, 597, 783, 1071, 1109, 1285
Bst6I CTCTTC 2 cut(s) 1168, 2295
BstACI GRCGYC 1 cut(s) 2249
BstC8I GCNNGC 3 cut(s) 733, 1049, 1978
BstDEI CTNAG 9 cut(s) 271, 386, 513, 798, 1288, 1376, 1872, 1968, 1995
BstEII GGTNACC 1 cut(s) 89
BstF5I GGATG 7 cut(s) 763, 809, 1055, 1210, 1718, 1861, 2105
BstH2I RGCGCY 1 cut(s) 1383
BstHHI GCGC 1 cut(s) 1382
BstKTI GATC 8 cut(s) 424, 520, 622, 1195, 1249, 1717, 1831, 2236
BstMAI GTCTC 6 cut(s) 35, 84, 244, 594, 825, 1291
BstMBI GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
BstMWI GCNNNNNNNGC 3 cut(s) 409, 2102, 2180
BstNI CCWGG 3 cut(s) 528, 787, 982
BstNSI RCATGY 6 cut(s) 175, 356, 635, 1684, 1963, 2266
BstPI GGTNACC 1 cut(s) 89
BstSCI CCNGG 4 cut(s) 526, 785, 980, 1556
BstSFI CTRYAG 2 cut(s) 986, 2226
BstV1I GCAGC 6 cut(s) 244, 972, 1170, 1369, 1628, 2240
BstV2I GAAGAC 1 cut(s) 1110
BstX2I RGATCY 3 cut(s) 517, 1192, 1828
BstYI RGATCY 3 cut(s) 517, 1192, 1828
BsuI GTATCC 1 cut(s) 2204
BsuRI GGCC 3 cut(s) 221, 862, 1491
BtsCI GGATG 7 cut(s) 763, 809, 1055, 1210, 1718, 1861, 2105
BtsI GCAGTG 3 cut(s) 883, 995, 1140
BtsIMutI CAGTG 4 cut(s) 883, 995, 1140, 2341
BveI ACCTGC 3 cut(s) 134, 2248, 2317
Cac8I GCNNGC 3 cut(s) 733, 1049, 1978
CaiI CAGNNNCTG 3 cut(s) 242, 781, 1244
CciI TCATGA 2 cut(s) 1578, 2176
CfoI GCGC 1 cut(s) 1382
Cfr13I GGNCC 5 cut(s) 315, 860, 1490, 1947, 2110
CseI GACGC 1 cut(s) 2238
CsiI ACCWGGT 1 cut(s) 526
Csp6I GTAC 6 cut(s) 178, 194, 287, 808, 1678, 1801
CviQI GTAC 6 cut(s) 178, 194, 287, 808, 1678, 1801
DdeI CTNAG 9 cut(s) 271, 386, 513, 798, 1288, 1376, 1872, 1968, 1995
DpnI GATC 8 cut(s) 423, 519, 621, 1194, 1248, 1716, 1830, 2235
DpnII GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
DrdI GACNNNNNNGTC 1 cut(s) 562
DseDI GACNNNNNNGTC 1 cut(s) 562
EaeI YGGCCR 1 cut(s) 219
Eam1104I CTCTTC 2 cut(s) 1168, 2295
EarI CTCTTC 2 cut(s) 1168, 2295
EciI GGCGGA 1 cut(s) 1217
Eco130I CCWWGG 1 cut(s) 827
Eco24I GRGCYC 1 cut(s) 2176
Eco31I GGTCTC 2 cut(s) 594, 825
Eco47I GGWCC 3 cut(s) 315, 1947, 2110
Eco47III AGCGCT 1 cut(s) 1381
Eco57I CTGAAG 2 cut(s) 240, 1479
Eco88I CYCGRG 1 cut(s) 650
Eco91I GGTNACC 1 cut(s) 89
EcoO109I RGGNCCY 2 cut(s) 1947, 2110
EcoO65I GGTNACC 1 cut(s) 89
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 3 cut(s) 526, 785, 980
EcoT14I CCWWGG 1 cut(s) 827
EcoT22I ATGCAT 1 cut(s) 2152
EcoT38I GRGCYC 1 cut(s) 2176
ErhI CCWWGG 1 cut(s) 827
FalI AAGNNNNNCTT 4 cut(s) 325, 357, 1770, 1802
FaqI GGGAC 3 cut(s) 633, 1960, 2123
FbaI TGATCA 1 cut(s) 421
FblI GTMKAC 2 cut(s) 1747, 2363
Fnu4HI GCNGC 6 cut(s) 233, 986, 1159, 1383, 1642, 2229
FokI GGATG 7 cut(s) 770, 816, 1042, 1217, 1705, 1868, 2112
FriOI GRGCYC 1 cut(s) 2176
Fsp4HI GCNGC 6 cut(s) 233, 986, 1159, 1383, 1642, 2229
FspBI CTAG 6 cut(s) 191, 548, 732, 962, 1044, 1472
GlaI GCGC 1 cut(s) 1381
GluI GCNGC 6 cut(s) 233, 986, 1159, 1383, 1642, 2229
GsaI CCCAGC 1 cut(s) 396
HaeII RGCGCY 1 cut(s) 1383
HaeIII GGCC 3 cut(s) 221, 862, 1491
HapII CCGG 1 cut(s) 1557
HgaI GACGC 1 cut(s) 2238
HhaI GCGC 1 cut(s) 1382
Hin1I GRCGYC 1 cut(s) 2249
Hin6I GCGC 1 cut(s) 1380
HinP1I GCGC 1 cut(s) 1380
HindIII AAGCTT 2 cut(s) 1592, 2181
HinfI GANTC 7 cut(s) 267, 646, 1112, 1372, 1485, 1629, 2222
HpaII CCGG 1 cut(s) 1557
HphI GGTGA 7 cut(s) 101, 125, 516, 703, 1956, 2076, 2152
Hpy166II GTNNAC 5 cut(s) 318, 611, 1748, 2084, 2364
Hpy8I GTNNAC 5 cut(s) 318, 611, 1748, 2084, 2364
Hpy99I CGWCG 1 cut(s) 559
HpyAV CCTTC 6 cut(s) 531, 904, 925, 1760, 2117, 2121
HpyCH4III ACNGT 6 cut(s) 291, 597, 783, 1071, 1109, 1285
HpyCH4IV ACGT 2 cut(s) 1750, 2080
HpyF10VI GCNNNNNNNGC 3 cut(s) 409, 2102, 2180
HpyF3I CTNAG 9 cut(s) 271, 386, 513, 798, 1288, 1376, 1872, 1968, 1995
HpySE526I ACGT 2 cut(s) 1750, 2080
Hsp92I GRCGYC 1 cut(s) 2249
HspAI GCGC 1 cut(s) 1380
Ksp22I TGATCA 1 cut(s) 421
Kzo9I GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
LguI GCTCTTC 1 cut(s) 1168
LmnI GCTCC 2 cut(s) 53, 1611
Lsp1109I GCAGC 6 cut(s) 244, 972, 1170, 1369, 1628, 2240
LweI GCATC 4 cut(s) 718, 744, 2137, 2159
MabI ACCWGGT 1 cut(s) 526
MaeI CTAG 6 cut(s) 191, 548, 732, 962, 1044, 1472
MaeII ACGT 2 cut(s) 1750, 2080
MaeIII GTNAC 6 cut(s) 89, 472, 685, 1000, 1022, 1962
MalI GATC 8 cut(s) 423, 519, 621, 1194, 1248, 1716, 1830, 2235
MboI GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
MfeI CAATTG 2 cut(s) 99, 1135
MflI RGATCY 3 cut(s) 517, 1192, 1828
MhlI GDGCHC 1 cut(s) 2176
MlsI TGGCCA 1 cut(s) 221
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 2 cut(s) 655, 1623
MmeI TCCRAC 2 cut(s) 1633, 2013
MnlI CCTC 6 cut(s) 508, 651, 1471, 1475, 1648, 2131
Mox20I TGGCCA 1 cut(s) 221
Mph1103I ATGCAT 1 cut(s) 2152
MroXI GAANNNNTTC 1 cut(s) 2330
MscI TGGCCA 1 cut(s) 221
MseI TTAA 6 cut(s) 294, 1124, 1424, 1589, 1811, 2186
MslI CAYNNNNRTG 1 cut(s) 170
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 2 cut(s) 110, 2231
MspI CCGG 1 cut(s) 1557
MspR9I CCNGG 4 cut(s) 528, 787, 982, 1558
MunI CAATTG 2 cut(s) 99, 1135
Mva1269I GAATGC 1 cut(s) 2062
MvaI CCWGG 3 cut(s) 528, 787, 982
MwoI GCNNNNNNNGC 3 cut(s) 409, 2102, 2180
NciI CCSGG 1 cut(s) 1558
NdeII GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
NheI GCTAGC 1 cut(s) 731
NlaIV GGNNCC 3 cut(s) 519, 1948, 2111
NmuCI GTSAC 3 cut(s) 89, 1022, 1962
NsiI ATGCAT 1 cut(s) 2152
NspI RCATGY 6 cut(s) 175, 356, 635, 1684, 1963, 2266
PagI TCATGA 2 cut(s) 1578, 2176
PciI ACATGT 4 cut(s) 352, 631, 1959, 2262
PciSI GCTCTTC 1 cut(s) 1168
PcsI WCGNNNNNNNCGW 1 cut(s) 2077
PctI GAATGC 1 cut(s) 2062
PdmI GAANNNNTTC 1 cut(s) 2330
PfeI GAWTC 5 cut(s) 267, 1112, 1372, 1485, 2222
PflMI CCANNNNNTGG 1 cut(s) 213
PkrI GCNGC 6 cut(s) 234, 987, 1160, 1384, 1643, 2230
PleI GAGTC 2 cut(s) 654, 1623
PpsI GAGTC 2 cut(s) 654, 1623
PpuMI RGGWCCY 2 cut(s) 1947, 2110
PscI ACATGT 4 cut(s) 352, 631, 1959, 2262
PsiI TTATAA 2 cut(s) 575, 1500
Psp1406I AACGTT 1 cut(s) 2080
Psp5II RGGWCCY 2 cut(s) 1947, 2110
Psp6I CCWGG 3 cut(s) 526, 785, 980
PspEI GGTNACC 1 cut(s) 89
PspFI CCCAGC 1 cut(s) 392
PspGI CCWGG 3 cut(s) 526, 785, 980
PspN4I GGNNCC 3 cut(s) 519, 1948, 2111
PspPI GGNCC 5 cut(s) 315, 860, 1490, 1947, 2110
PspPPI RGGWCCY 2 cut(s) 1947, 2110
PstI CTGCAG 2 cut(s) 990, 2230
PstNI CAGNNNCTG 3 cut(s) 242, 781, 1244
PsuI RGATCY 3 cut(s) 517, 1192, 1828
PvuII CAGCTG 2 cut(s) 110, 2231
RsaI GTAC 6 cut(s) 179, 195, 288, 809, 1679, 1802
RsaNI GTAC 6 cut(s) 178, 194, 287, 808, 1678, 1801
RseI CAYNNNNRTG 1 cut(s) 170
SapI GCTCTTC 1 cut(s) 1168
SaqAI TTAA 6 cut(s) 294, 1124, 1424, 1589, 1811, 2186
SatI GCNGC 6 cut(s) 233, 986, 1159, 1383, 1642, 2229
Sau3AI GATC 8 cut(s) 421, 517, 619, 1192, 1246, 1714, 1828, 2233
Sau96I GGNCC 5 cut(s) 315, 860, 1490, 1947, 2110
ScaI AGTACT 1 cut(s) 1802
SchI GAGTC 2 cut(s) 655, 1623
ScrFI CCNGG 4 cut(s) 528, 787, 982, 1558
SduI GDGCHC 1 cut(s) 2176
SexAI ACCWGGT 1 cut(s) 526
SfaNI GCATC 4 cut(s) 718, 744, 2137, 2159
SfcI CTRYAG 2 cut(s) 986, 2226
SinI GGWCC 3 cut(s) 315, 1947, 2110
SmiMI CAYNNNNRTG 1 cut(s) 170
SmlI CTYRAG 6 cut(s) 32, 486, 542, 1776, 1804, 1920
SmoI CTYRAG 6 cut(s) 32, 486, 542, 1776, 1804, 1920
SpeI ACTAGT 1 cut(s) 190
SsiI CCGC 2 cut(s) 1059, 1202
SspI AATATT 1 cut(s) 1846
SspMI CTAG 6 cut(s) 191, 548, 732, 962, 1044, 1472
StyD4I CCNGG 4 cut(s) 526, 785, 980, 1556
StyI CCWWGG 1 cut(s) 827
TaaI ACNGT 6 cut(s) 291, 597, 783, 1071, 1109, 1285
TaiI ACGT 2 cut(s) 1753, 2083
TaqI TCGA 5 cut(s) 745, 823, 1690, 2236, 2410
TatI WGTACW 2 cut(s) 1677, 1800
TfiI GAWTC 5 cut(s) 267, 1112, 1372, 1485, 2222
Tru1I TTAA 6 cut(s) 294, 1124, 1424, 1589, 1811, 2186
Tru9I TTAA 6 cut(s) 294, 1124, 1424, 1589, 1811, 2186
TscAI CASTG 4 cut(s) 883, 995, 1147, 2341
TseFI GTSAC 3 cut(s) 89, 1022, 1962
TseI GCWGC 6 cut(s) 232, 985, 1158, 1382, 1641, 2228
Tsp45I GTSAC 3 cut(s) 89, 1022, 1962
TspDTI ATGAA 7 cut(s) 489, 1221, 1567, 1595, 1880, 2193, 2292
TspRI CASTG 4 cut(s) 883, 995, 1147, 2341
Van91I CCANNNNNTGG 1 cut(s) 213
VpaK11BI GGWCC 3 cut(s) 315, 1947, 2110
XapI RAATTY 5 cut(s) 119, 508, 1078, 1703, 2329
XceI RCATGY 6 cut(s) 175, 356, 635, 1684, 1963, 2266
XcmI CCANNNNNNNNNTGG 2 cut(s) 83, 214
XmiI GTMKAC 2 cut(s) 1747, 2363
XmnI GAANNNNTTC 1 cut(s) 2330
XspI CTAG 6 cut(s) 191, 548, 732, 962, 1044, 1472
ZrmI AGTACT 1 cut(s) 1802
Zsp2I ATGCAT 1 cut(s) 2152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.