Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006186

Physical Location & Seq

Genomic Coordinates Reverse (-)

47067912 .. 47072589

Gene Structure 4678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0353700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGGAGAAAGAGAAATCGAGCAAGCGCTCCCGAGACGAACGCGACCGACGAGACCGAGACCGCGACAGGGATCATCACAAGCATCGAAGCAGCCGCGACGCTTCCGATGACCACCACCGCCAACACCGCGCTCGATCGGACCGCGATTCGAAGCCCGAGCGCTCCCACGACCACAGATCTCGCCGTGACAGGTCGCCGGAGCCGCGGGACGACCGGGAAGCGTCGCGCGACCACCGCGAGCGGTCGTACGAGAGGGAAGGGAGTAGAGAGAGGTCCAGGCATCGCGAAGTGAAGCGGGAGAGGTCGGAGGAGGGAGAGGATGTGGTGGAGAGGAGGCATAAGAGGAAAGAGAGGGAGAGGAGTGAGGGTAGAGATGGCGGTGTGGATGAGTCTGAAGATTCTAAGAGAGCTAGGGGTTTGGATGAGAGGAAAGAGAGGAAGCGATTTGATGACCGCCGAGTAAAGGAAGAAGAGGATGCTGGAGAATTGGAAAGGAGCACTGAAGGGAATGTGATTCACACTGAGGTTAAGGTTAAGAAAGAAGAATTGGAGGATGATGAGGGCTTCACTACCACCCAAAATGGGGGTGCTCCGGTGGGTAATGGTGCCAGTCTGGATTCTACTATGGAATCAAGGGTTGTGCCTGAGACCTCTTTCCCCCCTAGTCATCCCCATCCTACCAAGGTATATTCGATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCTTCAACTGCTGGAAGAAGTGGAAATCTGCCTCCTGGTGAGTTAGATAAAATTAAGAATCTTCTGGCGAAACGTAAGGAATTGGCTGACAAGCTGAACAAAACGAAGTTAGACAAAGCAGCCAAAGCTATTTCAGATGCTAGCGCAAACTTGGGATTGAAGGATGGGATGCAACCTCCATCTGCAAGTACAGGAATGTTGCATCCCCCTGTGCCATCAACAATTAGTGGTACAAGTGGGATGACTGGTCTGACTGGTGAAAAATATGAAGCTGTAAAACTTGCACAGGAGCGGGCTGCCAGGATGGGCTTTCGCCATGACCCAGAATTTGCTCCTGTTATAAACTTGTTCCCAGGACAGGTGGCAACAGATGTTGTTCCCCCTCAGAAGCCTACCAAGGCCCCTGTTCTTCGACTTGATGCCCTTGGAAGGGAAATAGATGAACATGGAAATGTAGTCAATGTGACTAAACCAAACAACCTCAGCACTTTAAAGGTCAACATTAACAAACAGAAGAAAGACGCATTCCAAATTCTTAAACCTGAAGTCGATATGGATCCTGAATCAAATCCTTTTTTTGACCCGAAGATGGGCATTAATATGACGAAGATTATGAGGCCAAAGAGGATGAACTTCCAGTTTGTAGAGGAAGGGAAGTGGTCAAAAGATGCTGAACATATGAAGTTGAAGAGTAAATTTGGGGAATTACAAGCAAAAGAGCATAGGGCGAAGCAGGCCCAGTTGGCAAAGGCAAAGGCAGCACCTGATACAAATCCAAATTTGATAGAGGTAGCAGAAAGAGTCATCACCAAAGAAAAACCGAAGGATCCAATTCCTGAAGTTGAGTGGTGGGATGTGTCCTTTTTACAATCTGGTACTTATGGCGAGCTTGTTGATGGTAGAATACCTGAAGACAGATTAAAGTTGGACAAAATCACCATCTATGTTGAACATCCTCAGCCCATTGAGCCCCCTGTGGAGCCAGCTCCTCCACCACCTCAACCATTAAAGTTGACCAAGAAAGAGCAGAAAAAACTACGCACACAGCGTCGTCTTGCTAGAGAGAAAGATAAGCAGGAGATGATTAGACAGGGTCTGATTGAACCTCCCAAGTCAAAAGTTAAAATGAGTAATTTGATGAAAGTTCTTGGATCTGAAGCAACCCAAGATCCAACCAGACTGGAAAAGGAGATCCGGAGTGCAGCTGCTGAACGTGAACAAGCTCATATAGACAGGAATATTGCCCGCAAGCTCACTCCTGCGGAGCGCCGGGAGAAGAAAGAGAGGAAGCTTTTTGATGATCCAAATAATGTGGATACCATAGTCTCAGTTTATAAAATCAATGATCTATCTCATCCAAAGGCCCGCTTTAAGATTGATGTTAATGCCAGAGAGAATCGGCTGACTGGATGTGCTGTGATCTCAGATGGTATGAATGTTGTGGCTGTTGAAGGTGGAAGCAAATCTATCAAAAGGTATGCAAAGGTCATGCTTCGGCGCATAAACTGGGCTGAGGCTGTGAAAGAGGAGGAAGAAGATGAAGAAGAAAATGATGATAAGCCTCCTAACAAGTGTGTCTTGGTGTGGCAAGGAAGTGTTGCCAGGCCTAGTTTCAATAGATTTTTGGTTCATGAATGCATGACTGAAGCTGCTGGTCGAAAGTTCTTTGCTGATGCTGGCGTTGCTCATTACTGGGATCTTGCAGTCAACTTTGCAGATGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MENTAL

Protein Analysis

833

Amino Acids

94.82

Weight (kDa)

9.02

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRP3	PF08572	448 - 677	1.2e-64	pre-mRNA processing factor 3 domain
Prp3_C	PF06544	701 - 826	3e-42	Small nuclear ribonucleoprotein Prp3, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006186)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40095 AT2G40095 AT2G40095 AT3G55880 AT3G55880 AT3G55880 AT3G55880
fragaria_vesca	FvH4_7g24390
malus_domestica	MD01G1152300.v1.1 MD07G1221300.v1.1
prunus_persica	Prupe.2G249300_v2.0.a1
pyrus_communis	pycom01g17000 pycom07g19990
rosa_chinensis	RchiOBHm_Chr1g0370091
rosa_laevigata	RLG00000027075
rosa_multiflora	Rmu_sc0005056.1_g000007 Rmu_sc0005056.1_g000008
rosa_roxburghii	Rroxscaffold_4G00286830 Rroxscaffold_4G00287200
rosa_rugosa	Rorug01G0353700 Rorug01G0353800 Rorug01G0353900
rosa_samantha	Rh1AG362500 Rh1BG325700 Rh1CG339000 Rh1DG356200
rosa_wichuraiana	Rw1G031900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1115, 2109
AccB1I	GGYRCC	1 cut(s)	605
AccBSI	CCGCTC	2 cut(s)	241, 1066
AccIII	TCCGGA	1 cut(s)	1968
AcsI	RAATTY	4 cut(s)	1100, 1305, 1469, 1552
AcuI	CTGAAG	7 cut(s)	414, 522, 1338, 1632, 1704, 1950, 2439
AfaI	GTAC	5 cut(s)	248, 763, 964, 1006, 1651
AfeI	AGCGCT	2 cut(s)	26, 161
AfiI	CCNNNNNNNGG	9 cut(s)	67, 463, 582, 583, 1132, 1203, 1204, 1363, 1364
AgsI	TTSAA	7 cut(s)	780, 934, 1462, 1724, 1877, 2225, 2389
AjnI	CCWGG	5 cut(s)	275, 808, 1073, 1126, 2375
AjuI	GAANNNNNNNTTGG	2 cut(s)	530, 562
Alw21I	GWGCWC	2 cut(s)	500, 592
Alw26I	GTCTC	5 cut(s)	27, 45, 51, 641, 2104
AlwNI	CAGNNNCTG	3 cut(s)	1538, 1870, 1982
Ama87I	CYCGRG	2 cut(s)	30, 155
Aor13HI	TCCGGA	1 cut(s)	1968
Aor51HI	AGCGCT	2 cut(s)	26, 161
AoxI	GGCC	5 cut(s)	1173, 1391, 1509, 2136, 2378
ApeKI	GCWGC	7 cut(s)	90, 893, 1070, 1532, 1976, 1979, 2423
ApoI	RAATTY	4 cut(s)	1100, 1305, 1469, 1552
ArsI	GACNNNNNNTTYG	2 cut(s)	1085, 1117
AseI	ATTAAT	1 cut(s)	1371
AspLEI	GCGC	7 cut(s)	27, 131, 162, 228, 920, 2043, 2274
AspS9I	GGNCC	5 cut(s)	139, 273, 1174, 1510, 2137
AsuC2I	CCSGG	2 cut(s)	215, 2045
AsuHPI	GGTGA	4 cut(s)	824, 1043, 1573, 1702
AsuII	TTCGAA	1 cut(s)	149
AsuNHI	GCTAGC	1 cut(s)	914
AvaI	CYCGRG	2 cut(s)	30, 155
AvaII	GGWCC	2 cut(s)	139, 273
BaeI	ACNNNNGTAYC	2 cut(s)	2082, 2115
BamHI	GGATCC	2 cut(s)	1330, 1600
BanI	GGYRCC	1 cut(s)	605
BanII	GRGCYC	1 cut(s)	1746
BbsI	GAAGAC	1 cut(s)	1692
Bbv12I	GWGCWC	2 cut(s)	500, 592
BbvCI	CCTCAGC	3 cut(s)	1256, 1731, 2286
BbvI	GCAGC	7 cut(s)	102, 905, 1057, 1544, 1966, 1988, 2410
BceAI	ACGGC	1 cut(s)	168
BciT130I	CCWGG	5 cut(s)	277, 810, 1075, 1128, 2377
BciVI	GTATCC	1 cut(s)	2083
BcnI	CCSGG	2 cut(s)	215, 2045
BcoDI	GTCTC	5 cut(s)	27, 45, 51, 641, 2104
BfaI	CTAG	7 cut(s)	411, 663, 759, 915, 1833, 2382, 2500
BfoI	RGCGCY	3 cut(s)	28, 163, 2044
BfuI	GTATCC	1 cut(s)	2083
BglI	GCCNNNNNGGC	1 cut(s)	1517
BglII	AGATCT	2 cut(s)	176, 734
BisI	GCNGC	9 cut(s)	91, 94, 203, 894, 1071, 1533, 1977, 1980, 2424
BlsI	GCNGC	9 cut(s)	92, 95, 204, 895, 1072, 1534, 1978, 1981, 2425
Bme1390I	CCNGG	7 cut(s)	215, 277, 810, 1075, 1128, 2045, 2377
Bme18I	GGWCC	2 cut(s)	139, 273
BmeT110I	CYCGRG	2 cut(s)	30, 155
BmgT120I	GGNCC	5 cut(s)	139, 273, 1174, 1510, 2137
BmiI	GGNNCC	6 cut(s)	201, 607, 1176, 1332, 1602, 1755
BmrFI	CCNGG	7 cut(s)	215, 277, 810, 1075, 1128, 2045, 2377
BmrI	ACTGGG	3 cut(s)	1507, 2290, 2476
BmsI	GCATC	9 cut(s)	91, 289, 466, 901, 933, 985, 1183, 1432, 2437
BmtI	GCTAGC	1 cut(s)	918
BmuI	ACTGGG	3 cut(s)	1507, 2290, 2476
BpiI	GAAGAC	1 cut(s)	1692
BpmI	CTGGAG	1 cut(s)	501
Bpu10I	CCTNAGC	3 cut(s)	1256, 1731, 2286
Bpu14I	TTCGAA	1 cut(s)	149
BpuMI	CCSGG	2 cut(s)	215, 2045
BsaBI	GATNNNNATC	2 cut(s)	1329, 1545
BsaI	GGTCTC	3 cut(s)	45, 51, 641
BsaJI	CCNNGG	5 cut(s)	203, 681, 1126, 1170, 1198
BsaWI	WCCGGW	2 cut(s)	592, 1968
BsaXI	ACNNNNNCTCC	4 cut(s)	306, 336, 352, 382
Bsc4I	CCNNNNNNNGG	9 cut(s)	67, 463, 582, 583, 1132, 1203, 1204, 1363, 1364
Bse1I	ACTGG	9 cut(s)	609, 1024, 1033, 1411, 1513, 1959, 2185, 2285, 2471
Bse8I	GATNNNNATC	2 cut(s)	1329, 1545
BseAI	TCCGGA	1 cut(s)	1968
BseBI	CCWGG	5 cut(s)	277, 810, 1075, 1128, 2377
BseDI	CCNNGG	5 cut(s)	203, 681, 1126, 1170, 1198
BseJI	GATNNNNATC	2 cut(s)	1329, 1545
BseLI	CCNNNNNNNGG	9 cut(s)	67, 463, 582, 583, 1132, 1203, 1204, 1363, 1364
BseMII	CTCAG	8 cut(s)	513, 636, 1172, 1270, 1745, 2115, 2211, 2277
BseNI	ACTGG	9 cut(s)	609, 1024, 1033, 1411, 1513, 1959, 2185, 2285, 2471
BseRI	GAGGAG	5 cut(s)	323, 346, 373, 1752, 2315
BseXI	GCAGC	7 cut(s)	102, 905, 1057, 1544, 1966, 1988, 2410
BsgI	GTGCAG	1 cut(s)	1995
Bsh1285I	CGRYCG	4 cut(s)	46, 137, 214, 245
BshFI	GGCC	5 cut(s)	1175, 1393, 1511, 2138, 2380
BshNI	GGYRCC	1 cut(s)	605
BsiEI	CGRYCG	4 cut(s)	46, 137, 214, 245
BsiHKAI	GWGCWC	2 cut(s)	500, 592
BsiHKCI	CYCGRG	2 cut(s)	30, 155
BsiSI	CCGG	5 cut(s)	197, 214, 593, 1969, 2044
BsiWI	CGTACG	1 cut(s)	246
BslFI	GGGAC	2 cut(s)	221, 784
BslI	CCNNNNNNNGG	9 cut(s)	67, 463, 582, 583, 1132, 1203, 1204, 1363, 1364
BsmAI	GTCTC	5 cut(s)	27, 45, 51, 641, 2104
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	2 cut(s)	221, 784
BsmI	GAATGC	2 cut(s)	1298, 2414
BsnI	GGCC	5 cut(s)	1175, 1393, 1511, 2138, 2380
Bso31I	GGTCTC	3 cut(s)	45, 51, 641
BsoBI	CYCGRG	2 cut(s)	30, 155
Bsp119I	TTCGAA	1 cut(s)	149
Bsp1286I	GDGCHC	3 cut(s)	500, 592, 1746
Bsp13I	TCCGGA	1 cut(s)	1968
Bsp68I	TCGCGA	1 cut(s)	285
BspANI	GGCC	5 cut(s)	1175, 1393, 1511, 2138, 2380
BspCNI	CTCAG	8 cut(s)	514, 637, 1171, 1269, 1744, 2114, 2210, 2278
BspEI	TCCGGA	1 cut(s)	1968
BspHI	TCATGA	2 cut(s)	739, 2404
BspLI	GGNNCC	6 cut(s)	201, 607, 1176, 1332, 1602, 1755
BspOI	GCTAGC	1 cut(s)	918
BspT104I	TTCGAA	1 cut(s)	149
BspT107I	GGYRCC	1 cut(s)	605
BspTNI	GGTCTC	3 cut(s)	45, 51, 641
BsrBI	CCGCTC	2 cut(s)	241, 1066
BsrI	ACTGG	9 cut(s)	609, 1024, 1033, 1411, 1513, 1959, 2185, 2285, 2471
BssECI	CCNNGG	5 cut(s)	203, 681, 1126, 1170, 1198
BssT1I	CCWWGG	3 cut(s)	681, 1170, 1198
Bst2UI	CCWGG	5 cut(s)	277, 810, 1075, 1128, 2377
Bst6I	CTCTTC	2 cut(s)	465, 1457
BstBI	TTCGAA	1 cut(s)	149
BstDEI	CTNAG	9 cut(s)	402, 522, 645, 1158, 1256, 1731, 2101, 2197, 2286
BstDSI	CCRYGG	1 cut(s)	203
BstH2I	RGCGCY	3 cut(s)	28, 163, 2044
BstHHI	GCGC	7 cut(s)	27, 131, 162, 228, 920, 2043, 2274
BstMAI	GTCTC	5 cut(s)	27, 45, 51, 641, 2104
BstMCI	CGRYCG	4 cut(s)	46, 137, 214, 245
BstMWI	GCNNNNNNNGC	9 cut(s)	126, 202, 234, 899, 1508, 1517, 1532, 1741, 2456
BstNI	CCWGG	5 cut(s)	277, 810, 1075, 1128, 2377
BstSCI	CCNGG	7 cut(s)	213, 275, 808, 1073, 1126, 2043, 2375
BstV1I	GCAGC	7 cut(s)	102, 905, 1057, 1544, 1966, 1988, 2410
BstV2I	GAAGAC	1 cut(s)	1692
BstX2I	RGATCY	8 cut(s)	176, 734, 1330, 1600, 1925, 1942, 1965, 2470
BstYI	RGATCY	8 cut(s)	176, 734, 1330, 1600, 1925, 1942, 1965, 2470
BsuI	GTATCC	1 cut(s)	2083
BsuRI	GGCC	5 cut(s)	1175, 1393, 1511, 2138, 2380
BtgI	CCRYGG	1 cut(s)	203
BtgZI	GCGATG	1 cut(s)	266
BtsIMutI	CAGTG	2 cut(s)	498, 519
BtuMI	TCGCGA	1 cut(s)	285
CaiI	CAGNNNCTG	3 cut(s)	1538, 1870, 1982
CciI	TCATGA	2 cut(s)	739, 2404
CfoI	GCGC	7 cut(s)	27, 131, 162, 228, 920, 2043, 2274
Cfr13I	GGNCC	5 cut(s)	139, 273, 1174, 1510, 2137
Cfr42I	CCGCGG	1 cut(s)	206
CpoI	CGGWCCG	1 cut(s)	139
CseI	GACGC	4 cut(s)	107, 210, 1304, 1811
Csp6I	GTAC	5 cut(s)	247, 762, 963, 1005, 1650
CspCI	CAANNNNNGTGG	2 cut(s)	2067, 2102
CspI	CGGWCCG	1 cut(s)	139
CviAII	CATG	7 cut(s)	740, 749, 1091, 1220, 2263, 2405, 2413
CviQI	GTAC	5 cut(s)	247, 762, 963, 1005, 1650
DdeI	CTNAG	9 cut(s)	402, 522, 645, 1158, 1256, 1731, 2101, 2197, 2286
DraI	TTTAAA	1 cut(s)	1266
Eam1104I	CTCTTC	2 cut(s)	465, 1457
EarI	CTCTTC	2 cut(s)	465, 1457
Eco130I	CCWWGG	3 cut(s)	681, 1170, 1198
Eco147I	AGGCCT	1 cut(s)	2380
Eco24I	GRGCYC	1 cut(s)	1746
Eco31I	GGTCTC	3 cut(s)	45, 51, 641
Eco47I	GGWCC	2 cut(s)	139, 273
Eco47III	AGCGCT	2 cut(s)	26, 161
Eco57I	CTGAAG	7 cut(s)	414, 522, 1338, 1632, 1704, 1950, 2439
Eco88I	CYCGRG	2 cut(s)	30, 155
EcoO109I	RGGNCCY	1 cut(s)	1174
EcoRII	CCWGG	5 cut(s)	275, 808, 1073, 1126, 2375
EcoT14I	CCWWGG	3 cut(s)	681, 1170, 1198
EcoT22I	ATGCAT	1 cut(s)	2414
EcoT38I	GRGCYC	1 cut(s)	1746
ErhI	CCWWGG	3 cut(s)	681, 1170, 1198
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	7 cut(s)	743, 752, 1094, 1223, 2266, 2408, 2416
FalI	AAGNNNNNCTT	4 cut(s)	2126, 2158, 2336, 2368
FaqI	GGGAC	2 cut(s)	221, 784
FatI	CATG	7 cut(s)	739, 748, 1090, 1219, 2262, 2404, 2412
FauI	CCCGC	5 cut(s)	198, 288, 1059, 2027, 2147
FauNDI	CATATG	1 cut(s)	1452
Fnu4HI	GCNGC	9 cut(s)	91, 94, 203, 894, 1071, 1533, 1977, 1980, 2424
FriOI	GRGCYC	1 cut(s)	1746
Fsp4HI	GCNGC	9 cut(s)	91, 94, 203, 894, 1071, 1533, 1977, 1980, 2424
FspBI	CTAG	7 cut(s)	411, 663, 759, 915, 1833, 2382, 2500
GlaI	GCGC	7 cut(s)	26, 130, 161, 227, 919, 2042, 2273
GluI	GCNGC	9 cut(s)	91, 94, 203, 894, 1071, 1533, 1977, 1980, 2424
GsuI	CTGGAG	1 cut(s)	501
HaeII	RGCGCY	3 cut(s)	28, 163, 2044
HaeIII	GGCC	5 cut(s)	1175, 1393, 1511, 2138, 2380
HapII	CCGG	5 cut(s)	197, 214, 593, 1969, 2044
HgaI	GACGC	4 cut(s)	107, 210, 1304, 1811
HhaI	GCGC	7 cut(s)	27, 131, 162, 228, 920, 2043, 2274
Hin1II	CATG	7 cut(s)	743, 752, 1094, 1223, 2266, 2408, 2416
Hin6I	GCGC	7 cut(s)	25, 129, 160, 226, 918, 2041, 2272
HinP1I	GCGC	7 cut(s)	25, 129, 160, 226, 918, 2041, 2272
HincII	GTYRAC	3 cut(s)	1273, 1788, 2482
HindII	GTYRAC	3 cut(s)	1273, 1788, 2482
HindIII	AAGCTT	1 cut(s)	2063
HpaII	CCGG	5 cut(s)	197, 214, 593, 1969, 2044
HphI	GGTGA	4 cut(s)	824, 1043, 1573, 1702
Hpy166II	GTNNAC	4 cut(s)	1273, 1788, 1991, 2482
Hpy188III	TCNNGA	8 cut(s)	30, 284, 614, 740, 1334, 1610, 1969, 2405
Hpy8I	GTNNAC	4 cut(s)	1273, 1788, 1991, 2482
Hpy99I	CGWCG	4 cut(s)	51, 101, 226, 1827
HpyAV	CCTTC	7 cut(s)	251, 497, 928, 1197, 1418, 1591, 2219
HpyCH4IV	ACGT	2 cut(s)	847, 1987
HpyCH4V	TGCA	9 cut(s)	946, 959, 976, 1058, 1976, 2255, 2412, 2477, 2489
HpyF10VI	GCNNNNNNNGC	9 cut(s)	126, 202, 234, 899, 1508, 1517, 1532, 1741, 2456
HpyF3I	CTNAG	9 cut(s)	402, 522, 645, 1158, 1256, 1731, 2101, 2197, 2286
HpySE526I	ACGT	2 cut(s)	847, 1987
Hsp92II	CATG	7 cut(s)	743, 752, 1094, 1223, 2266, 2408, 2416
HspAI	GCGC	7 cut(s)	25, 129, 160, 226, 918, 2041, 2272
Kpn2I	TCCGGA	1 cut(s)	1968
KspI	CCGCGG	1 cut(s)	206
Lsp1109I	GCAGC	7 cut(s)	102, 905, 1057, 1544, 1966, 1988, 2410
LweI	GCATC	9 cut(s)	91, 289, 466, 901, 933, 985, 1183, 1432, 2437
MaeI	CTAG	7 cut(s)	411, 663, 759, 915, 1833, 2382, 2500
MaeII	ACGT	2 cut(s)	847, 1987
MaeIII	GTNAC	2 cut(s)	185, 1237
MbiI	CCGCTC	2 cut(s)	241, 1066
MflI	RGATCY	8 cut(s)	176, 734, 1330, 1600, 1925, 1942, 1965, 2470
MhlI	GDGCHC	3 cut(s)	500, 592, 1746
MlyI	GAGTC	2 cut(s)	398, 1584
MmeI	TCCRAC	3 cut(s)	285, 1680, 1970
Mph1103I	ATGCAT	1 cut(s)	2414
MroI	TCCGGA	1 cut(s)	1968
MslI	CAYNNNNRTG	2 cut(s)	1224, 1373
MspA1I	CMGCKG	2 cut(s)	205, 1979
MspI	CCGG	5 cut(s)	197, 214, 593, 1969, 2044
MspR9I	CCNGG	7 cut(s)	215, 277, 810, 1075, 1128, 2045, 2377
Mva1269I	GAATGC	2 cut(s)	1298, 2414
MvaI	CCWGG	5 cut(s)	277, 810, 1075, 1128, 2377
MwoI	GCNNNNNNNGC	9 cut(s)	126, 202, 234, 899, 1508, 1517, 1532, 1741, 2456
NciI	CCSGG	2 cut(s)	215, 2045
NdeI	CATATG	1 cut(s)	1452
NheI	GCTAGC	1 cut(s)	914
NlaIII	CATG	7 cut(s)	743, 752, 1094, 1223, 2266, 2408, 2416
NlaIV	GGNNCC	6 cut(s)	201, 607, 1176, 1332, 1602, 1755
NmeAIII	GCCGAG	1 cut(s)	482
NmuCI	GTSAC	2 cut(s)	185, 1237
NruI	TCGCGA	1 cut(s)	285
NsiI	ATGCAT	1 cut(s)	2414
NspV	TTCGAA	1 cut(s)	149
PagI	TCATGA	2 cut(s)	739, 2404
PceI	AGGCCT	1 cut(s)	2380
PcsI	WCGNNNNNNNCGW	2 cut(s)	46, 1819
PctI	GAATGC	2 cut(s)	1298, 2414
PfeI	GAWTC	8 cut(s)	146, 398, 514, 617, 629, 832, 1337, 2170
Pfl23II	CGTACG	1 cut(s)	246
PflFI	GACNNNGTC	1 cut(s)	1866
PkrI	GCNGC	9 cut(s)	92, 95, 204, 895, 1072, 1534, 1978, 1981, 2425
Ple19I	CGATCG	1 cut(s)	137
PleI	GAGTC	2 cut(s)	397, 1583
PpsI	GAGTC	2 cut(s)	397, 1583
PshBI	ATTAAT	1 cut(s)	1371
PsiI	TTATAA	2 cut(s)	1115, 2109
Psp6I	CCWGG	5 cut(s)	275, 808, 1073, 1126, 2375
PspGI	CCWGG	5 cut(s)	275, 808, 1073, 1126, 2375
PspLI	CGTACG	1 cut(s)	246
PspN4I	GGNNCC	6 cut(s)	201, 607, 1176, 1332, 1602, 1755
PspPI	GGNCC	5 cut(s)	139, 273, 1174, 1510, 2137
PstNI	CAGNNNCTG	3 cut(s)	1538, 1870, 1982
PsuI	RGATCY	8 cut(s)	176, 734, 1330, 1600, 1925, 1942, 1965, 2470
PsyI	GACNNNGTC	1 cut(s)	1866
PvuI	CGATCG	1 cut(s)	137
PvuII	CAGCTG	1 cut(s)	1979
RruI	TCGCGA	1 cut(s)	285
RsaI	GTAC	5 cut(s)	248, 763, 964, 1006, 1651
RsaNI	GTAC	5 cut(s)	247, 762, 963, 1005, 1650
RseI	CAYNNNNRTG	2 cut(s)	1224, 1373
Rsr2I	CGGWCCG	1 cut(s)	139
RsrII	CGGWCCG	1 cut(s)	139
SacII	CCGCGG	1 cut(s)	206
SatI	GCNGC	9 cut(s)	91, 94, 203, 894, 1071, 1533, 1977, 1980, 2424
Sau96I	GGNCC	5 cut(s)	139, 273, 1174, 1510, 2137
SchI	GAGTC	2 cut(s)	398, 1584
ScrFI	CCNGG	7 cut(s)	215, 277, 810, 1075, 1128, 2045, 2377
SduI	GDGCHC	3 cut(s)	500, 592, 1746
SfaNI	GCATC	9 cut(s)	91, 289, 466, 901, 933, 985, 1183, 1432, 2437
Sfr303I	CCGCGG	1 cut(s)	206
SfuI	TTCGAA	1 cut(s)	149
SgrBI	CCGCGG	1 cut(s)	206
SinI	GGWCC	2 cut(s)	139, 273
SmiMI	CAYNNNNRTG	2 cut(s)	1224, 1373
SseBI	AGGCCT	1 cut(s)	2380
SspI	AATATT	1 cut(s)	2014
SspMI	CTAG	7 cut(s)	411, 663, 759, 915, 1833, 2382, 2500
StuI	AGGCCT	1 cut(s)	2380
StyD4I	CCNGG	7 cut(s)	213, 275, 808, 1073, 1126, 2043, 2375
StyI	CCWWGG	3 cut(s)	681, 1170, 1198
TaiI	ACGT	2 cut(s)	850, 1990
TaqI	TCGA	8 cut(s)	17, 85, 133, 149, 692, 1186, 1323, 2431
TaqII	GACCGA	2 cut(s)	60, 69
TatI	WGTACW	2 cut(s)	761, 962
TauI	GCSGC	2 cut(s)	96, 205
TfiI	GAWTC	8 cut(s)	146, 398, 514, 617, 629, 832, 1337, 2170
TscAI	CASTG	2 cut(s)	505, 526
TseFI	GTSAC	2 cut(s)	185, 1237
TseI	GCWGC	7 cut(s)	90, 893, 1070, 1532, 1976, 1979, 2423
Tsp45I	GTSAC	2 cut(s)	185, 1237
TspRI	CASTG	2 cut(s)	505, 526
Tth111I	GACNNNGTC	1 cut(s)	1866
VpaK11BI	GGWCC	2 cut(s)	139, 273
VspI	ATTAAT	1 cut(s)	1371
XapI	RAATTY	4 cut(s)	1100, 1305, 1469, 1552
XspI	CTAG	7 cut(s)	411, 663, 759, 915, 1833, 2382, 2500
Zsp2I	ATGCAT	1 cut(s)	2414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.