Rorug01G0353800

regulation of endocannabinoid signaling pathway

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
47077208 .. 47080213
3006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0353800.1

Sequence Viewer

Length: 1572 bp
ATGGCGAGCAAAGAAGAAGTTGCAGTAGGGATTGTTCTGGGCACAACCTACTCGTGTGTTGCAGCATGGCAGCAGGACCATGTAGAAATCATAGCCAATGAACAAGGGAACAGAACCACTCCTTCTTGTGTTGCTTTCACTGATACTGACCACCTGATTGGTGGCGCTGCCATTAGCCAGCTTATCAGGAATCCCAGAAACTCCATCTTTGATAATGCAAAACGGCTAATTGGCAGGAGATTCAGTGATGCTTCCGTTCAACGTGATGTGAAGCTCTGGCCATTCAAGGTCATTGAAGGTCCTGGTGACAAACCCATGATTGTGGTTACCCACAGGGGTGAAGAGAAACAGTTCACTGCTGAAGAAATCTCATCAATGGTTCTCGCAAAAATGGGGGAGATTGCCAAGGCCTATCTTTGCTCACCACTAGTGAATAATGCAGTTATAACTGTTCCTGCTTACTTCAATAACTCGCAGCGTCAGGCTACAAAGAATGCTGGTGTCACTGCTGGTCTGAATGTGATGCGTGTCATCAATGAACCGACAGCTGCAGCTATTGCTTATGGACTTGAAAAGAAGGCTGGATGGTATAGCAAAAGAAATGTGATGGTGTTTGATTTGGGTGGTGGTACTTTAGATGTGTCACTACTTACCATAGGGGACGGTGTCTTTGAAGTGAAGGCCACCGATGGAGACACTCACCTTGGTGGTGAAGATTTTGTTAACAGAATTGTTGATTATTGTGCGGAGCAATTCAAGAAGTTGCATAAATCAGACATTAGTGGAAACCCCCGAGCTCTTAGGAGGTTAAGAAATGCTTGTGAGAAGGCAAAAAGGAGACTTTCCTTTTTGTCAACTACTGACATTGAAATTGATTGTCTAGATCAGAGTACCGATTTCTATCTGATTATTACCCGCGTAAAATTTGAAAGCCTCAACAAAGATTTATTCAGCAAGTGTATGGAGCCTGTGAAGAATTGTTTGAGGGATGCTAAAATGGACATAAGCAGTGTCCATGATGTTGTTCTCGTCCATGATGTTGTTCTCGTCGGTGGCTCTTACAGAATTCCAAAGGGGAAGGAGCTGTGCAAGGGAATTAATCCAGATGAGGCAGTGGCATATGGCGCAGCTGTTCAAGCTGCAGTGTTGAGTGGGAATGGTAATGGGAAGCTTCAAGACTTCACTTTTCTGGATGTCACGCCTCTGTCACTCGGTGTGGATACTTCTCGTGGTGATACCAAGAATATCATGACAGTCATGATTCCTAGAAACACAAGAATTCCCGTAAAAAAGCAGAAACTTTTGGCTACTTTACATGACAACCAAACTGGCATTGATTTCCCTATTTTTGAAGGTGAGAGCACCACAACGCTACATAACAACTCTTTGGGTGAATTTGGCCTCAATGACATTCCTCCAGCTCCCAAGGGTGTCCCTCTATTCAGTGTGTGCTTTAGTATTGATGCAAACGGTATCTTGAGTGCGTCTGCTGAGGATATATCAACTGGTCAGAAGAAAGAGATTACAATCAAAAGTGACAGAAGAACTTTGGGAATTGAGAAGATGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

523

Amino Acids

57.1

Weight (kDa)

7.54

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 8 - 515 8e-187 Hsp70 protein
MreB_Mbl PF06723 145 - 356 3.1e-11 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 446
AccII CGCG 1 cut(s) 918
AciI CCGC 2 cut(s) 746, 916
AcoI YGGCCR 1 cut(s) 278
AcsI RAATTY 4 cut(s) 923, 1065, 1278, 1394
AcuI CTGAAG 1 cut(s) 381
AdeI CACNNNGTG 1 cut(s) 1214
AfaI GTAC 2 cut(s) 631, 892
AhlI ACTAGT 1 cut(s) 427
AjnI CCWGG 1 cut(s) 301
AleI CACNNNNGTG 2 cut(s) 336, 705
Alw21I GWGCWC 2 cut(s) 799, 1364
Alw26I GTCTC 2 cut(s) 687, 832
Ama87I CYCGRG 1 cut(s) 792
AoxI GGCC 4 cut(s) 278, 408, 681, 1399
ApeKI GCWGC 8 cut(s) 62, 70, 167, 475, 548, 551, 1127, 1139
ApoI RAATTY 4 cut(s) 923, 1065, 1278, 1394
ArsI GACNNNNNNTTYG 2 cut(s) 653, 685
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 2 cut(s) 167, 1127
AspS9I GGNCC 2 cut(s) 76, 299
AsuHPI GGTGA 8 cut(s) 317, 350, 414, 692, 722, 1244, 1367, 1403
AvaI CYCGRG 1 cut(s) 792
AvaII GGWCC 2 cut(s) 76, 299
BaeGI GKGCMC 1 cut(s) 44
BalI TGGCCA 1 cut(s) 280
BanII GRGCYC 1 cut(s) 799
BauI CACGAG 2 cut(s) 52, 1227
Bbv12I GWGCWC 2 cut(s) 799, 1364
BbvCI CCTCAGC 1 cut(s) 1491
BbvI GCAGC 8 cut(s) 74, 82, 154, 487, 535, 563, 1126, 1139
BccI CCATC 4 cut(s) 212, 579, 601, 683
BceAI ACGGC 1 cut(s) 239
BciT130I CCWGG 1 cut(s) 303
BciVI GTATCC 1 cut(s) 1213
BcoDI GTCTC 2 cut(s) 687, 832
BcuI ACTAGT 1 cut(s) 427
BfaI CTAG 3 cut(s) 428, 881, 1266
BfmI CTRYAG 2 cut(s) 549, 1140
BfoI RGCGCY 1 cut(s) 168
BfuI GTATCC 1 cut(s) 1213
BisI GCNGC 8 cut(s) 63, 71, 168, 476, 549, 552, 1128, 1140
BlsI GCNGC 8 cut(s) 64, 72, 169, 477, 550, 553, 1129, 1141
Bme1390I CCNGG 1 cut(s) 303
Bme18I GGWCC 2 cut(s) 76, 299
BmeT110I CYCGRG 1 cut(s) 792
BmgT120I GGNCC 2 cut(s) 76, 299
BmiI GGNNCC 1 cut(s) 966
BmrFI CCNGG 1 cut(s) 303
BmsI GCATC 4 cut(s) 238, 513, 979, 1453
BpmI CTGGAG 1 cut(s) 1401
Bpu10I CCTNAGC 1 cut(s) 1491
BpuEI CTTGAG 1 cut(s) 1498
BsaBI GATNNNNATC 2 cut(s) 900, 1526
BsaJI CCNNGG 3 cut(s) 405, 703, 1425
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bse1I ACTGG 2 cut(s) 1333, 1510
Bse8I GATNNNNATC 2 cut(s) 900, 1526
BseBI CCWGG 1 cut(s) 303
BseDI CCNNGG 3 cut(s) 405, 703, 1425
BseGI GGATG 3 cut(s) 590, 994, 1198
BseJI GATNNNNATC 2 cut(s) 900, 1526
BseMII CTCAG 1 cut(s) 1482
BseNI ACTGG 2 cut(s) 1333, 1510
BseSI GKGCMC 1 cut(s) 44
BseXI GCAGC 8 cut(s) 74, 82, 154, 487, 535, 563, 1126, 1139
Bsh1236I CGCG 1 cut(s) 918
BshFI GGCC 4 cut(s) 280, 410, 683, 1401
BsiHKAI GWGCWC 2 cut(s) 799, 1364
BsiHKCI CYCGRG 1 cut(s) 792
BslFI GGGAC 2 cut(s) 674, 1418
BsmAI GTCTC 2 cut(s) 687, 832
BsmFI GGGAC 2 cut(s) 674, 1418
BsmI GAATGC 1 cut(s) 499
BsnI GGCC 4 cut(s) 280, 410, 683, 1401
BsoBI CYCGRG 1 cut(s) 792
Bsp1286I GDGCHC 3 cut(s) 44, 799, 1364
Bsp143I GATC 1 cut(s) 883
BspACI CCGC 2 cut(s) 746, 916
BspANI GGCC 4 cut(s) 280, 410, 683, 1401
BspCNI CTCAG 1 cut(s) 1483
BspFNI CGCG 1 cut(s) 918
BspHI TCATGA 2 cut(s) 1248, 1257
BspLI GGNNCC 1 cut(s) 966
BspMAI CTGCAG 2 cut(s) 553, 1144
BsrI ACTGG 2 cut(s) 1333, 1510
BssECI CCNNGG 3 cut(s) 405, 703, 1425
BssMI GATC 1 cut(s) 883
BssSI CACGAG 2 cut(s) 52, 1227
BssT1I CCWWGG 3 cut(s) 405, 703, 1425
Bst2BI CACGAG 2 cut(s) 52, 1227
Bst2UI CCWGG 1 cut(s) 303
Bst4CI ACNGT 5 cut(s) 351, 451, 665, 1255, 1472
Bst6I CTCTTC 1 cut(s) 336
BstAPI GCANNNNNTGC 1 cut(s) 557
BstC8I GCNNGC 2 cut(s) 7, 179
BstDEI CTNAG 2 cut(s) 800, 1491
BstEII GGTNACC 1 cut(s) 325
BstF5I GGATG 3 cut(s) 590, 994, 1198
BstFNI CGCG 1 cut(s) 918
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 2 cut(s) 167, 1127
BstKTI GATC 1 cut(s) 886
BstMAI GTCTC 2 cut(s) 687, 832
BstMBI GATC 1 cut(s) 883
BstMWI GCNNNNNNNGC 3 cut(s) 557, 1124, 1136
BstNI CCWGG 1 cut(s) 303
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 1 cut(s) 301
BstSFI CTRYAG 2 cut(s) 549, 1140
BstSLI GKGCMC 1 cut(s) 44
BstUI CGCG 1 cut(s) 918
BstV1I GCAGC 8 cut(s) 74, 82, 154, 487, 535, 563, 1126, 1139
BstXI CCANNNNNNTGG 2 cut(s) 158, 322
BsuI GTATCC 1 cut(s) 1213
BsuRI GGCC 4 cut(s) 280, 410, 683, 1401
BtsCI GGATG 3 cut(s) 590, 994, 1198
BtsI GCAGTG 5 cut(s) 354, 504, 1015, 1119, 1149
BtsIMutI CAGTG 8 cut(s) 138, 250, 354, 504, 1015, 1119, 1149, 1450
Cac8I GCNNGC 2 cut(s) 7, 179
CciI TCATGA 2 cut(s) 1248, 1257
CfoI GCGC 2 cut(s) 167, 1127
Cfr13I GGNCC 2 cut(s) 76, 299
CseI GACGC 2 cut(s) 467, 1473
Csp6I GTAC 2 cut(s) 630, 891
CviAII CATG 8 cut(s) 66, 80, 316, 1016, 1034, 1249, 1258, 1316
CviQI GTAC 2 cut(s) 630, 891
DdeI CTNAG 2 cut(s) 800, 1491
DpnI GATC 1 cut(s) 885
DpnII GATC 1 cut(s) 883
DraIII CACNNNGTG 1 cut(s) 1214
EaeI YGGCCR 1 cut(s) 278
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
Ecl136II GAGCTC 1 cut(s) 797
Eco130I CCWWGG 3 cut(s) 405, 703, 1425
Eco147I AGGCCT 1 cut(s) 410
Eco24I GRGCYC 1 cut(s) 799
Eco47I GGWCC 2 cut(s) 76, 299
Eco53kI GAGCTC 1 cut(s) 797
Eco57I CTGAAG 1 cut(s) 381
Eco88I CYCGRG 1 cut(s) 792
Eco91I GGTNACC 1 cut(s) 325
EcoICRI GAGCTC 1 cut(s) 797
EcoO109I RGGNCCY 1 cut(s) 299
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 2 cut(s) 1065, 1278
EcoRII CCWGG 1 cut(s) 301
EcoT14I CCWWGG 3 cut(s) 405, 703, 1425
EcoT38I GRGCYC 1 cut(s) 799
ErhI CCWWGG 3 cut(s) 405, 703, 1425
FaeI CATG 8 cut(s) 69, 83, 319, 1019, 1037, 1252, 1261, 1319
FalI AAGNNNNNCTT 2 cut(s) 802, 834
FaqI GGGAC 2 cut(s) 674, 1418
FatI CATG 8 cut(s) 65, 79, 315, 1015, 1033, 1248, 1257, 1315
FauI CCCGC 1 cut(s) 923
FauNDI CATATG 1 cut(s) 1120
Fnu4HI GCNGC 8 cut(s) 63, 71, 168, 476, 549, 552, 1128, 1140
FokI GGATG 3 cut(s) 597, 1001, 1205
FriOI GRGCYC 1 cut(s) 799
Fsp4HI GCNGC 8 cut(s) 63, 71, 168, 476, 549, 552, 1128, 1140
FspBI CTAG 3 cut(s) 428, 881, 1266
GlaI GCGC 2 cut(s) 166, 1126
GluI GCNGC 8 cut(s) 63, 71, 168, 476, 549, 552, 1128, 1140
GsuI CTGGAG 1 cut(s) 1401
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 4 cut(s) 280, 410, 683, 1401
HgaI GACGC 2 cut(s) 467, 1473
HhaI GCGC 2 cut(s) 167, 1127
Hin1II CATG 8 cut(s) 69, 83, 319, 1019, 1037, 1252, 1261, 1319
Hin6I GCGC 2 cut(s) 165, 1125
HinP1I GCGC 2 cut(s) 165, 1125
HincII GTYRAC 2 cut(s) 724, 855
HindII GTYRAC 2 cut(s) 724, 855
HindIII AAGCTT 1 cut(s) 1169
HinfI GANTC 3 cut(s) 190, 240, 1261
HpaI GTTAAC 1 cut(s) 724
HphI GGTGA 8 cut(s) 317, 350, 414, 692, 722, 1244, 1367, 1403
Hpy166II GTNNAC 3 cut(s) 354, 724, 855
Hpy188I TCNGA 5 cut(s) 516, 775, 888, 906, 1512
Hpy188III TCNNGA 9 cut(s) 187, 757, 881, 1103, 1175, 1190, 1249, 1258, 1477
Hpy8I GTNNAC 3 cut(s) 354, 724, 855
Hpy99I CGWCG 1 cut(s) 1052
HpyAV CCTTC 7 cut(s) 132, 290, 571, 673, 820, 1072, 1346
HpyCH4III ACNGT 5 cut(s) 351, 451, 665, 1255, 1472
HpyCH4IV ACGT 1 cut(s) 262
HpyCH4V TGCA 9 cut(s) 23, 62, 218, 440, 551, 766, 1089, 1142, 1466
HpyF10VI GCNNNNNNNGC 3 cut(s) 557, 1124, 1136
HpyF3I CTNAG 2 cut(s) 800, 1491
HpySE526I ACGT 1 cut(s) 262
Hsp92II CATG 8 cut(s) 69, 83, 319, 1019, 1037, 1252, 1261, 1319
HspAI GCGC 2 cut(s) 165, 1125
KspAI GTTAAC 1 cut(s) 724
Kzo9I GATC 1 cut(s) 883
LmnI GCTCC 4 cut(s) 748, 964, 1081, 1426
Lsp1109I GCAGC 8 cut(s) 74, 82, 154, 487, 535, 563, 1126, 1139
LweI GCATC 4 cut(s) 238, 513, 979, 1453
MaeI CTAG 3 cut(s) 428, 881, 1266
MaeII ACGT 1 cut(s) 262
MaeIII GTNAC 7 cut(s) 305, 325, 502, 642, 1195, 1206, 1535
MalI GATC 1 cut(s) 885
MboI GATC 1 cut(s) 883
MboII GAAGA 7 cut(s) 26, 353, 374, 725, 985, 1525, 1554
MhlI GDGCHC 3 cut(s) 44, 799, 1364
MlsI TGGCCA 1 cut(s) 280
MluNI TGGCCA 1 cut(s) 280
Mox20I TGGCCA 1 cut(s) 280
MroXI GAANNNNTTC 1 cut(s) 350
MscI TGGCCA 1 cut(s) 280
MseI TTAA 3 cut(s) 723, 809, 1098
MslI CAYNNNNRTG 3 cut(s) 320, 336, 705
Msp20I TGGCCA 1 cut(s) 280
MspA1I CMGCKG 2 cut(s) 548, 1130
MspR9I CCNGG 1 cut(s) 303
Mva1269I GAATGC 1 cut(s) 499
MvaI CCWGG 1 cut(s) 303
MvnI CGCG 1 cut(s) 918
MwoI GCNNNNNNNGC 3 cut(s) 557, 1124, 1136
NdeI CATATG 1 cut(s) 1120
NdeII GATC 1 cut(s) 883
NlaIII CATG 8 cut(s) 69, 83, 319, 1019, 1037, 1252, 1261, 1319
NlaIV GGNNCC 1 cut(s) 966
NmuCI GTSAC 6 cut(s) 305, 502, 642, 1195, 1206, 1535
OliI CACNNNNGTG 2 cut(s) 336, 705
PagI TCATGA 2 cut(s) 1248, 1257
PceI AGGCCT 1 cut(s) 410
PctI GAATGC 1 cut(s) 499
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 3 cut(s) 190, 240, 1261
PflFI GACNNNGTC 1 cut(s) 665
PkrI GCNGC 8 cut(s) 64, 72, 169, 477, 550, 553, 1129, 1141
PpuMI RGGWCCY 1 cut(s) 299
PshBI ATTAAT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 446
Psp124BI GAGCTC 1 cut(s) 799
Psp5II RGGWCCY 1 cut(s) 299
Psp6I CCWGG 1 cut(s) 301
PspEI GGTNACC 1 cut(s) 325
PspGI CCWGG 1 cut(s) 301
PspN4I GGNNCC 1 cut(s) 966
PspPI GGNCC 2 cut(s) 76, 299
PspPPI RGGWCCY 1 cut(s) 299
PsrI GAACNNNNNNTAC 2 cut(s) 18, 50
PstI CTGCAG 2 cut(s) 553, 1144
PsyI GACNNNGTC 1 cut(s) 665
PvuII CAGCTG 2 cut(s) 548, 1130
RsaI GTAC 2 cut(s) 631, 892
RsaNI GTAC 2 cut(s) 630, 891
RseI CAYNNNNRTG 3 cut(s) 320, 336, 705
SacI GAGCTC 1 cut(s) 799
SaqAI TTAA 3 cut(s) 723, 809, 1098
SatI GCNGC 8 cut(s) 63, 71, 168, 476, 549, 552, 1128, 1140
Sau3AI GATC 1 cut(s) 883
Sau96I GGNCC 2 cut(s) 76, 299
ScrFI CCNGG 1 cut(s) 303
SduI GDGCHC 3 cut(s) 44, 799, 1364
SfaNI GCATC 4 cut(s) 238, 513, 979, 1453
SfcI CTRYAG 2 cut(s) 549, 1140
SinI GGWCC 2 cut(s) 76, 299
SmiMI CAYNNNNRTG 3 cut(s) 320, 336, 705
SmlI CTYRAG 1 cut(s) 1477
SmoI CTYRAG 1 cut(s) 1477
SpeI ACTAGT 1 cut(s) 427
SseBI AGGCCT 1 cut(s) 410
SsiI CCGC 2 cut(s) 746, 916
SspMI CTAG 3 cut(s) 428, 881, 1266
SstI GAGCTC 1 cut(s) 799
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 1 cut(s) 301
StyI CCWWGG 3 cut(s) 405, 703, 1425
TaaI ACNGT 5 cut(s) 351, 451, 665, 1255, 1472
TaiI ACGT 1 cut(s) 265
TfiI GAWTC 3 cut(s) 190, 240, 1261
Tru1I TTAA 3 cut(s) 723, 809, 1098
Tru9I TTAA 3 cut(s) 723, 809, 1098
TscAI CASTG 8 cut(s) 145, 250, 361, 511, 1015, 1119, 1149, 1450
TseFI GTSAC 6 cut(s) 305, 502, 642, 1195, 1206, 1535
TseI GCWGC 8 cut(s) 62, 70, 167, 475, 548, 551, 1127, 1139
Tsp45I GTSAC 6 cut(s) 305, 502, 642, 1195, 1206, 1535
TspDTI ATGAA 2 cut(s) 114, 552
TspGWI ACGGA 1 cut(s) 244
TspRI CASTG 8 cut(s) 145, 250, 361, 511, 1015, 1119, 1149, 1450
Tth111I GACNNNGTC 1 cut(s) 665
VpaK11BI GGWCC 2 cut(s) 76, 299
VspI ATTAAT 1 cut(s) 1098
XapI RAATTY 4 cut(s) 923, 1065, 1278, 1394
XbaI TCTAGA 1 cut(s) 880
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 3 cut(s) 428, 881, 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.