Rorug01G0445000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0013572
Physical Location & Seq
Forward (+)
54150313 .. 54154001
3689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0445000.1

Sequence Viewer

Length: 1533 bp
ATGGCGACCTGGTTCTTCCTCATAGTGACTACCCTATTCATCTCTGTTCTTGTCAAAACCATTCTCAGTCTAATCTCAACAAACAAACTCCCTCCTGGACCTGTCGCCATTCCCATAATCAGCAGCTTGTTATGGCTCCGCCAGTCGCCTTATGAGATGGAACTCGCACTCAGAAAACTCCATGGCCAATACGGACCGATTTTCACCCTCAATCTCGGCTCCCGCCCTAAGATATTCGTCGGCAGCAGCTCCCTGGCTCACCAGGCCTTAGTCCAGAGCGGGGCTGTGTTTGCAGACAGGCCACCGGCCTTGGCTACCGATAAGATCATCACTAGTAATCAACACAACATCAGCTCTGCACCGTATGGACTTACATGGCGGCTCCTCCGTCGCAATCTGACGTCTGAGATACTCCACCCTATGAGGGTTAAGTCTTATGGTGCGGCGCGCAAGTGGGTTCTGGACATCCTCACCACTCGGCTCCAGTTGGAAGAGCAATCCCAATCTAAAGGTGTTATAGTAGTAGACCATTTTCAGTATGCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGAGACAAACTCGACGAAAAGCAGATCAAAGAAGTTGAACGCGTTCAGCGACAGTTGCTGTTGGGTTTGTGGCGATTCAGGTTGCTTAGTATTAAGCCTAACATTACCAAGATCGTGTTGAAAAAGCAGTGGAGCGAGTTTTTGAAGATCAGGAAAGAACAAGAAGACGTGCTCATTCCTCTTATACGAGCAAGAAGTAAGGCAAAGGAGGAGAGGCTGAGCAAGGTGGACCAAAGTGATGAATTTGTGTTGTCGTATGTTGATACGTTGTGGGATCTTCAGCTGCATGAGGAGAAGAGAAAGCTTGAGGAAGGCGAAATAGTTAGTCTTTGTTCTGAGTTTCTAAGTGCCGGCACTGATACTACATCCACTGCATTGCAGTGGATCATGGCCAACATAGTCAAGTATCCACATGTCCAAGAACGCATTTTCGCAGAGATTAAAGGGGTTGTGAAAAAAACTGAGGAAGACGTGAAAGAGGATGACTTGCAGAAGATGCCTTATCTGAAAGCTGTGATCTTGGAGGGTCTAAGGCGTCACCCACCTGGCCACTTTTTGTTGCCACACAGAGTCACCCAAGACATTGTTTTGGATGGTTATGTGGTGCCCAAGAATGCTACTGTCAATTTCACAGTGGCTGATATAGGGTGGGACTCAAAAGTGTGGGAAGACCCTATGGCTTTCAAGCCGGAGAGATTCTTGAGTGGCGGTGCAGGAGAAGGGGTTGATATAACAGGAAATAGAGAGATTAAGATGATGCCTTTTGGGGCAGGGAGGAGAATTTGTCCTGCTTCTGGTTTAGCTATGCTTCATCTTGAGTATTTTGTGGCCAATCTGGTTTGGAGATTTGAATGGAAAGCTGTGGATGGAGCCAATGTGGACCTTTCGGAGAAGCAGGAGTTCACTGTGGTCATGAAGAATCCGTTGCAGGTCAACATATCTCAGAGGGTGAATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

510

Amino Acids

58.13

Weight (kDa)

9.14

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 499 2e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08580
fragaria_vesca FvH4_7g33930
malus_domestica MD01G1235600.v1.1 MD07G1308400.v1.1
prunus_persica Prupe.2G325600_v2.0.a1
pyrus_communis pycom01g24370 pycom07g28060
rosa_chinensis RchiOBHm_Chr1g0384121
rosa_laevigata RLG00000026070
rosa_multiflora Rmu_sc0005139.1_g000017
rosa_roxburghii Rroxscaffold_4G00276970
rosa_rugosa Rorug01G0445000 Rorug01G0445100
rosa_samantha Rh1AG470500 Rh1BG427900 Rh1CG440600 Rh1DG460900
rosa_wichuraiana Rw1G040220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 404
Acc36I ACCTGC 1 cut(s) 1492
AccB1I GGYRCC 1 cut(s) 1177
AccBSI CCGCTC 1 cut(s) 279
AccI GTMKAC 1 cut(s) 525
AccII CGCG 2 cut(s) 448, 615
AciI CCGC 6 cut(s) 139, 223, 279, 379, 443, 1281
AclWI GGATC 2 cut(s) 855, 965
AcoI YGGCCR 4 cut(s) 184, 963, 1120, 1401
AcsI RAATTY 2 cut(s) 815, 1353
AcuI CTGAAG 1 cut(s) 836
AcyI GRCGYC 2 cut(s) 401, 1108
AfiI CCNNNNNNNGG 3 cut(s) 280, 424, 1367
AflIII ACRYGT 2 cut(s) 613, 985
AgsI TTSAA 5 cut(s) 611, 694, 718, 1258, 1424
AhlI ACTAGT 1 cut(s) 332
AjiI CACGTC 2 cut(s) 742, 1045
AjnI CCWGG 5 cut(s) 8, 94, 252, 261, 1117
AluBI AGCT 8 cut(s) 126, 249, 354, 856, 877, 1085, 1376, 1433
AluI AGCT 8 cut(s) 126, 249, 354, 856, 877, 1085, 1376, 1433
Alw21I GWGCWC 1 cut(s) 747
Alw26I GTCTC 1 cut(s) 570
AlwI GGATC 2 cut(s) 855, 965
AlwNI CAGNNNCTG 2 cut(s) 631, 1211
AoxI GGCC 7 cut(s) 184, 264, 299, 306, 963, 1120, 1401
ApeKI GCWGC 4 cut(s) 123, 243, 246, 856
ApoI RAATTY 2 cut(s) 815, 1353
Asp700I GAANNNNTTC 1 cut(s) 615
AspLEI GCGC 2 cut(s) 448, 450
AspS9I GGNCC 4 cut(s) 98, 194, 802, 1453
AsuHPI GGTGA 5 cut(s) 196, 251, 463, 1103, 1138
AvaII GGWCC 4 cut(s) 98, 194, 802, 1453
BaeGI GKGCMC 1 cut(s) 1182
BalI TGGCCA 4 cut(s) 186, 965, 1122, 1403
BanI GGYRCC 1 cut(s) 1177
BbsI GAAGAC 3 cut(s) 744, 1047, 1248
Bbv12I GWGCWC 1 cut(s) 747
BbvI GCAGC 4 cut(s) 135, 255, 258, 843
BccI CCATC 3 cut(s) 151, 1160, 1433
BciT130I CCWGG 5 cut(s) 10, 96, 254, 263, 1119
BciVI GTATCC 1 cut(s) 990
BcoDI GTCTC 1 cut(s) 570
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 1 cut(s) 333
BfuAI ACCTGC 1 cut(s) 1492
BfuI GTATCC 1 cut(s) 990
BisI GCNGC 6 cut(s) 124, 244, 247, 380, 444, 857
BlpI GCTNAGC 1 cut(s) 791
BlsI GCNGC 6 cut(s) 125, 245, 248, 381, 445, 858
Bme1390I CCNGG 5 cut(s) 10, 96, 254, 263, 1119
Bme18I GGWCC 4 cut(s) 98, 194, 802, 1453
BmgBI CACGTC 2 cut(s) 742, 1045
BmgT120I GGNCC 4 cut(s) 98, 194, 802, 1453
BmiI GGNNCC 6 cut(s) 137, 220, 383, 482, 1179, 1444
BmrFI CCNGG 5 cut(s) 10, 96, 254, 263, 1119
BmsI GCATC 2 cut(s) 1059, 1320
BpiI GAAGAC 3 cut(s) 744, 1047, 1248
BplI GAGNNNNNCTC 2 cut(s) 567, 599
BpmI CTGGAG 1 cut(s) 467
Bpu1102I GCTNAGC 1 cut(s) 791
BpuEI CTTGAG 3 cut(s) 899, 1294, 1409
BsaHI GRCGYC 2 cut(s) 401, 1108
BsaJI CCNNGG 3 cut(s) 181, 252, 309
BsaXI ACNNNNNCTCC 6 cut(s) 1281, 1311, 1342, 1372, 1434, 1464
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 424, 1367
Bse118I RCCGGY 2 cut(s) 304, 923
Bse1I ACTGG 2 cut(s) 142, 484
Bse3DI GCAATG 1 cut(s) 947
BseBI CCWGG 5 cut(s) 10, 96, 254, 263, 1119
BseDI CCNNGG 3 cut(s) 181, 252, 309
BseGI GGATG 5 cut(s) 465, 938, 1060, 1171, 1444
BseLI CCNNNNNNNGG 3 cut(s) 280, 424, 1367
BseMI GCAATG 1 cut(s) 947
BseMII CTCAG 7 cut(s) 79, 184, 396, 782, 900, 1026, 1529
BseNI ACTGG 2 cut(s) 142, 484
BsePI GCGCGC 1 cut(s) 446
BseRI GAGGAG 4 cut(s) 374, 797, 878, 1363
BseSI GKGCMC 1 cut(s) 1182
BseXI GCAGC 4 cut(s) 135, 255, 258, 843
BsgI GTGCAG 2 cut(s) 342, 1305
Bsh1236I CGCG 2 cut(s) 448, 615
BshFI GGCC 7 cut(s) 186, 266, 301, 308, 965, 1122, 1403
BshNI GGYRCC 1 cut(s) 1177
BsiHKAI GWGCWC 1 cut(s) 747
BsiSI CCGG 3 cut(s) 305, 924, 1262
BslFI GGGAC 1 cut(s) 1238
BslI CCNNNNNNNGG 3 cut(s) 280, 424, 1367
BsmAI GTCTC 1 cut(s) 570
BsmFI GGGAC 1 cut(s) 1238
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 7 cut(s) 186, 266, 301, 308, 965, 1122, 1403
Bsp1286I GDGCHC 2 cut(s) 747, 1182
Bsp143I GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
Bsp1720I GCTNAGC 1 cut(s) 791
Bsp19I CCATGG 1 cut(s) 181
BspACI CCGC 6 cut(s) 139, 223, 279, 379, 443, 1281
BspANI GGCC 7 cut(s) 186, 266, 301, 308, 965, 1122, 1403
BspCNI CTCAG 7 cut(s) 78, 183, 397, 783, 901, 1027, 1528
BspFNI CGCG 2 cut(s) 448, 615
BspHI TCATGA 1 cut(s) 1485
BspLI GGNNCC 6 cut(s) 137, 220, 383, 482, 1179, 1444
BspMI ACCTGC 1 cut(s) 1492
BspPI GGATC 2 cut(s) 855, 965
BspQI GCTCTTC 1 cut(s) 486
BspT107I GGYRCC 1 cut(s) 1177
BsrBI CCGCTC 1 cut(s) 279
BsrDI GCAATG 1 cut(s) 947
BsrFI RCCGGY 2 cut(s) 304, 923
BsrI ACTGG 2 cut(s) 142, 484
BssAI RCCGGY 2 cut(s) 304, 923
BssECI CCNNGG 3 cut(s) 181, 252, 309
BssHII GCGCGC 1 cut(s) 446
BssMI GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
BssNI GRCGYC 2 cut(s) 401, 1108
BssT1I CCWWGG 2 cut(s) 181, 309
Bst2UI CCWGG 5 cut(s) 10, 96, 254, 263, 1119
Bst4CI ACNGT 5 cut(s) 363, 627, 1195, 1207, 1480
Bst6I CTCTTC 2 cut(s) 486, 863
BstACI GRCGYC 2 cut(s) 401, 1108
BstAPI GCANNNNNTGC 1 cut(s) 1069
BstC8I GCNNGC 2 cut(s) 448, 925
BstDSI CCRYGG 1 cut(s) 181
BstF5I GGATG 5 cut(s) 465, 938, 1060, 1171, 1444
BstFNI CGCG 2 cut(s) 448, 615
BstHHI GCGC 2 cut(s) 448, 450
BstKTI GATC 7 cut(s) 327, 600, 687, 723, 850, 960, 1092
BstMAI GTCTC 1 cut(s) 570
BstMBI GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
BstMWI GCNNNNNNNGC 4 cut(s) 263, 290, 628, 1069
BstNI CCWGG 5 cut(s) 10, 96, 254, 263, 1119
BstNSI RCATGY 1 cut(s) 989
BstSCI CCNGG 5 cut(s) 8, 94, 252, 261, 1117
BstSLI GKGCMC 1 cut(s) 1182
BstUI CGCG 2 cut(s) 448, 615
BstV1I GCAGC 4 cut(s) 135, 255, 258, 843
BstV2I GAAGAC 3 cut(s) 744, 1047, 1248
BstX2I RGATCY 1 cut(s) 847
BstYI RGATCY 1 cut(s) 847
BsuI GTATCC 1 cut(s) 990
BsuRI GGCC 7 cut(s) 186, 266, 301, 308, 965, 1122, 1403
BtgI CCRYGG 1 cut(s) 181
BtrI CACGTC 2 cut(s) 742, 1045
BtsCI GGATG 5 cut(s) 465, 938, 1060, 1171, 1444
BtsI GCAGTG 3 cut(s) 707, 942, 959
BtsIMutI CAGTG 6 cut(s) 707, 927, 942, 959, 1212, 1476
BveI ACCTGC 1 cut(s) 1492
Cac8I GCNNGC 2 cut(s) 448, 925
CaiI CAGNNNCTG 2 cut(s) 631, 1211
CciI TCATGA 1 cut(s) 1485
CfoI GCGC 2 cut(s) 448, 450
Cfr10I RCCGGY 2 cut(s) 304, 923
Cfr13I GGNCC 4 cut(s) 98, 194, 802, 1453
CpoI CGGWCCG 1 cut(s) 194
CseI GACGC 1 cut(s) 1097
CsiI ACCWGGT 1 cut(s) 8
CspCI CAANNNNNGTGG 2 cut(s) 291, 326
CspI CGGWCCG 1 cut(s) 194
CviAII CATG 6 cut(s) 182, 375, 860, 961, 986, 1486
DpnI GATC 7 cut(s) 326, 599, 686, 722, 849, 959, 1091
DpnII GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
EaeI YGGCCR 4 cut(s) 184, 963, 1120, 1401
Eam1104I CTCTTC 2 cut(s) 486, 863
EarI CTCTTC 2 cut(s) 486, 863
EciI GGCGGA 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 181, 309
Eco147I AGGCCT 1 cut(s) 266
Eco47I GGWCC 4 cut(s) 98, 194, 802, 1453
Eco57I CTGAAG 1 cut(s) 836
EcoRII CCWGG 5 cut(s) 8, 94, 252, 261, 1117
EcoT14I CCWWGG 2 cut(s) 181, 309
ErhI CCWWGG 2 cut(s) 181, 309
FaeI CATG 6 cut(s) 185, 378, 863, 964, 989, 1489
FaqI GGGAC 1 cut(s) 1238
FatI CATG 6 cut(s) 181, 374, 859, 960, 985, 1485
FauI CCCGC 2 cut(s) 230, 272
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 6 cut(s) 124, 244, 247, 380, 444, 857
FokI GGATG 5 cut(s) 452, 925, 1067, 1178, 1451
Fsp4HI GCNGC 6 cut(s) 124, 244, 247, 380, 444, 857
FspBI CTAG 1 cut(s) 333
GlaI GCGC 2 cut(s) 447, 449
GluI GCNGC 6 cut(s) 124, 244, 247, 380, 444, 857
GsuI CTGGAG 1 cut(s) 467
HaeIII GGCC 7 cut(s) 186, 266, 301, 308, 965, 1122, 1403
HapII CCGG 3 cut(s) 305, 924, 1262
HgaI GACGC 1 cut(s) 1097
HhaI GCGC 2 cut(s) 448, 450
Hin1I GRCGYC 2 cut(s) 401, 1108
Hin1II CATG 6 cut(s) 185, 378, 863, 964, 989, 1489
Hin6I GCGC 2 cut(s) 446, 448
HinP1I GCGC 2 cut(s) 446, 448
HincII GTYRAC 1 cut(s) 1507
HindII GTYRAC 1 cut(s) 1507
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 5 cut(s) 648, 1143, 1226, 1269, 1492
HpaII CCGG 3 cut(s) 305, 924, 1262
HphI GGTGA 5 cut(s) 196, 251, 463, 1103, 1138
Hpy166II GTNNAC 5 cut(s) 526, 802, 1453, 1476, 1507
Hpy188I TCNGA 7 cut(s) 173, 399, 406, 910, 1080, 1462, 1518
Hpy188III TCNNGA 6 cut(s) 274, 461, 724, 1273, 1388, 1486
Hpy8I GTNNAC 5 cut(s) 526, 802, 1453, 1476, 1507
Hpy99I CGWCG 3 cut(s) 242, 393, 590
HpyAV CCTTC 2 cut(s) 878, 1286
HpyCH4III ACNGT 5 cut(s) 363, 627, 1195, 1207, 1480
HpyCH4IV ACGT 4 cut(s) 401, 741, 839, 1044
HpyCH4V TGCA 8 cut(s) 293, 359, 859, 947, 952, 1063, 1286, 1501
HpyF10VI GCNNNNNNNGC 4 cut(s) 263, 290, 628, 1069
HpySE526I ACGT 4 cut(s) 401, 741, 839, 1044
Hsp92I GRCGYC 2 cut(s) 401, 1108
Hsp92II CATG 6 cut(s) 185, 378, 863, 964, 989, 1489
HspAI GCGC 2 cut(s) 446, 448
KroI GCCGGC 1 cut(s) 923
KroNI GCCGGC 1 cut(s) 925
Kzo9I GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 7 cut(s) 141, 224, 254, 387, 486, 705, 1442
Lsp1109I GCAGC 4 cut(s) 135, 255, 258, 843
LweI GCATC 2 cut(s) 1059, 1320
MabI ACCWGGT 1 cut(s) 8
MaeI CTAG 1 cut(s) 333
MaeII ACGT 4 cut(s) 401, 741, 839, 1044
MaeIII GTNAC 3 cut(s) 25, 1109, 1144
MalI GATC 7 cut(s) 326, 599, 686, 722, 849, 959, 1091
MbiI CCGCTC 1 cut(s) 279
MboI GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
MflI RGATCY 1 cut(s) 847
MhlI GDGCHC 2 cut(s) 747, 1182
MlsI TGGCCA 4 cut(s) 186, 965, 1122, 1403
MluCI AATT 3 cut(s) 815, 1198, 1353
MluI ACGCGT 1 cut(s) 613
MluNI TGGCCA 4 cut(s) 186, 965, 1122, 1403
MlyI GAGTC 2 cut(s) 1152, 1220
MmeI TCCRAC 1 cut(s) 468
Mox20I TGGCCA 4 cut(s) 186, 965, 1122, 1403
MroNI GCCGGC 1 cut(s) 923
MroXI GAANNNNTTC 1 cut(s) 615
MscI TGGCCA 4 cut(s) 186, 965, 1122, 1403
MseI TTAA 4 cut(s) 429, 666, 1014, 1323
MslI CAYNNNNRTG 1 cut(s) 952
Msp20I TGGCCA 4 cut(s) 186, 965, 1122, 1403
MspA1I CMGCKG 1 cut(s) 856
MspI CCGG 3 cut(s) 305, 924, 1262
MspR9I CCNGG 5 cut(s) 10, 96, 254, 263, 1119
Mva1269I GAATGC 1 cut(s) 1192
MvaI CCWGG 5 cut(s) 10, 96, 254, 263, 1119
MvnI CGCG 2 cut(s) 448, 615
MwoI GCNNNNNNNGC 4 cut(s) 263, 290, 628, 1069
NaeI GCCGGC 1 cut(s) 925
NcoI CCATGG 1 cut(s) 181
NdeII GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
NgoMIV GCCGGC 1 cut(s) 923
NlaIII CATG 6 cut(s) 185, 378, 863, 964, 989, 1489
NlaIV GGNNCC 6 cut(s) 137, 220, 383, 482, 1179, 1444
NmeAIII GCCGAG 2 cut(s) 195, 457
NmuCI GTSAC 3 cut(s) 25, 1109, 1144
NspI RCATGY 1 cut(s) 989
PagI TCATGA 1 cut(s) 1485
PauI GCGCGC 1 cut(s) 446
PceI AGGCCT 1 cut(s) 266
PciI ACATGT 1 cut(s) 985
PciSI GCTCTTC 1 cut(s) 486
PcsI WCGNNNNNNNCGW 1 cut(s) 619
PctI GAATGC 1 cut(s) 1192
PdiI GCCGGC 1 cut(s) 925
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 3 cut(s) 648, 1269, 1492
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 6 cut(s) 125, 245, 248, 381, 445, 858
PleI GAGTC 2 cut(s) 1151, 1220
PpsI GAGTC 2 cut(s) 1151, 1220
PscI ACATGT 1 cut(s) 985
Psp6I CCWGG 5 cut(s) 8, 94, 252, 261, 1117
PspGI CCWGG 5 cut(s) 8, 94, 252, 261, 1117
PspN4I GGNNCC 6 cut(s) 137, 220, 383, 482, 1179, 1444
PspPI GGNCC 4 cut(s) 98, 194, 802, 1453
PstNI CAGNNNCTG 2 cut(s) 631, 1211
PsuI RGATCY 1 cut(s) 847
PteI GCGCGC 1 cut(s) 446
PvuII CAGCTG 1 cut(s) 856
RseI CAYNNNNRTG 1 cut(s) 952
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SapI GCTCTTC 1 cut(s) 486
SaqAI TTAA 4 cut(s) 429, 666, 1014, 1323
SatI GCNGC 6 cut(s) 124, 244, 247, 380, 444, 857
Sau3AI GATC 7 cut(s) 324, 597, 684, 720, 847, 957, 1089
Sau96I GGNCC 4 cut(s) 98, 194, 802, 1453
SchI GAGTC 2 cut(s) 1152, 1220
ScrFI CCNGG 5 cut(s) 10, 96, 254, 263, 1119
SduI GDGCHC 2 cut(s) 747, 1182
SexAI ACCWGGT 1 cut(s) 8
SfaNI GCATC 2 cut(s) 1059, 1320
SinI GGWCC 4 cut(s) 98, 194, 802, 1453
SmiMI CAYNNNNRTG 1 cut(s) 952
SmlI CTYRAG 3 cut(s) 878, 1273, 1388
SmoI CTYRAG 3 cut(s) 878, 1273, 1388
SpeI ACTAGT 1 cut(s) 332
Sse9I AATT 3 cut(s) 815, 1198, 1353
SseBI AGGCCT 1 cut(s) 266
SsiI CCGC 6 cut(s) 139, 223, 279, 379, 443, 1281
SspMI CTAG 1 cut(s) 333
StuI AGGCCT 1 cut(s) 266
StyD4I CCNGG 5 cut(s) 8, 94, 252, 261, 1117
StyI CCWWGG 2 cut(s) 181, 309
TaaI ACNGT 5 cut(s) 363, 627, 1195, 1207, 1480
TaiI ACGT 4 cut(s) 404, 744, 842, 1047
TaqI TCGA 1 cut(s) 585
TaqII GACCGA 1 cut(s) 211
TasI AATT 3 cut(s) 815, 1198, 1353
TauI GCSGC 2 cut(s) 382, 446
TfiI GAWTC 3 cut(s) 648, 1269, 1492
Tru1I TTAA 4 cut(s) 429, 666, 1014, 1323
Tru9I TTAA 4 cut(s) 429, 666, 1014, 1323
TscAI CASTG 6 cut(s) 707, 934, 949, 959, 1212, 1483
TseFI GTSAC 3 cut(s) 25, 1109, 1144
TseI GCWGC 4 cut(s) 123, 243, 246, 856
Tsp45I GTSAC 3 cut(s) 25, 1109, 1144
TspDTI ATGAA 4 cut(s) 28, 828, 1373, 1502
TspGWI ACGGA 3 cut(s) 207, 377, 1485
TspRI CASTG 6 cut(s) 707, 934, 949, 959, 1212, 1483
VpaK11BI GGWCC 4 cut(s) 98, 194, 802, 1453
XapI RAATTY 2 cut(s) 815, 1353
XceI RCATGY 1 cut(s) 989
XmiI GTMKAC 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 1 cut(s) 333
ZraI GACGTC 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.