Rorug01G0458700

Transcription elongation factor B polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0005062
Physical Location & Seq
Reverse (-)
55272075 .. 55274450
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0458700.1

Sequence Viewer

Length: 2115 bp
ATGCTGGTACTCAAAACACTGAAGCAAACCCAATGGAAACAAAACCTCAAACACTTGTCAACCCTTTACAAACCACCAAAAACTGACCTCCCCACAATAGTTTCCACCAACATTTCCATAACCGGCCACTGCAAAACCGGCCAACTCGACATTGCTCGCAAACTATTCGACGAAATGCCCCACCGAACCGTCGTCTCATGGAACACCATGATTTCCGGGTACTCGAAGTGGGGCAGATTCGGGGACGCTCTGTTTTTGGTTTCGGCTATGCATCGTGGTGGTAATGTAGGACCAAATGATTCCACCGTAACATCAGTGCTTGGAGCGTGCGCGCGTTCCGGGTGTTTGAGGGAGGGAATGGAGGTGCATTGTCTGGTGGTGAAGTCCGGGTTGGAGAGGTTCGAGATTCTGGGGAGTTCGTTGTTGTGTTTTTACGCTAGCTGTTTGAAAATCGGGGATGCTGAGCGGGTTTTTGAGGAGTTGCGTGGGGGGAATGAGTTGTTGTGGGGGGTGATGCTGGTTGGTTATGTGCAATGTAACTTGATGGAGAGTGCTGTGGAGTTGTTTGAGAGGATGCCGAAGAAGGATGTTGCGGCGTGGAGTAGTTTGATTTCGGGGTATGTGAAGAGGGAAGATGGGTGTGAGAGGGCGTTGGAGTTGTTTGGGTTGATGAGGGAGAGTGGTGAGGTGGTGCCGAATGAGTTTACTTTCGACTCTGTTGTAAGGGCTTGTGGGAAACTGGGGGTGTTGTGGGTAGGGATGGTTATTCATGGCCTTTCAGTGAAATGTGGTGTTGATTTTGATGTATTTGTTAGTGTTGGATTGATAGAGTTTTATAGTGATTGCCAAGCTGTGGACTTTGCCAAGAGAGTTTTTGAAGGAATGGAGAACCCGAGTTTAAATGCTTCCAATGCATATATAGGTGGGCTTGTATCGATGGGTAGGATTGCAGATGCAGAGAGAGTTTTTGATGGAGTGAAAGAGAAGGATTCAGTTTCATACAATTTGATGATTAAAGGTTATGCGATGAGGGATCAAGTCAATGAGGCAAAGAGGTTATTTGAGTGTATGAAGCACAGAACTATAGTTTCTTCCAATACAATGATTTCTGTGTACTCCAGGAATGGTGAGATTGATAAGGCTTTACAGCTTTTTGAAGAAACGAAAGGGGAAAGAGACCATGTGACATGGAGTGCCATGATGTCGGGTTATATTCATAATCAGCAACATGAGGAGGCTCTGGAACTATATGTGACAATGTGCAGATTATCAATAGACCGTACAAGATCAACATTCGCTGCTCTATTTCATGCCTGTTCATGCCTTGGTTCTCTTGAGTTGGGACAAGTGCTCCATGCCCAGTTGATCAAGACACCATTTGAATCGAATGTGTATGTTGGAACTTCTCTGATTGATATGTATTCGAAATGCGGGTGCATCACTGATGCAGAAACATCCTTTAACAGCATTACTTCACCCAATGTGGCAGCTTGGACAGCTCTCATTAATGGGTGTGCACAACATGGGCTTGGCTCTGAGGCAGTTTTGTTGTTTGAGAGAATGTTAAAGCAAGGATTCATCCCTAATGCTGCTACTGTTTTTGGGGTTCTGTCTGCCTGCAATCATTCTGGCCTAGTAAATGAAGGGAGGAGAATATATGACTTAATGGAAAAAAGTTATGGGATAAACCCAAGTTTGGAACACTGTGCATGCATAGTAGATCTTCTTGGTCGGTCTGGCCGTCTACAAGAAGCTATGGATTTTATTGAAGAAATGACCATTGAACCAGATGGGGTTATCTGGGGAGCAATGCTCAATGCGTGTTGGCTGTGGATGGACACAGAACTTGCTGAGCAGGGGAAGTTTGAGGAGAAGATCAACGCTAGAAACAGATTGAGAAAATTGAAAGCAAAAAAGGATCCTGGATGCAGTTGGATTCGGCTGAATTTCCAAGTTCATCAATTCGCTGTACAAGATACTAACCATCCTCATTGTACCATGACTTACAAAACTTTGGAGCATCTGACAGCAAATATGAACTCTATTGTTGAATTTGGTTCTGTTTATATGCCAACAGTAAACTCTAGTTCTATCTATGCAACATATATTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04066 ko04120 ko05200 ko05211 map04066 map04120 map05200 map05211
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

704

Amino Acids

78.46

Weight (kDa)

6.06

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 63 - 112 1.6e-07 PPR repeat family
PPR PF01535 65 - 94 8.1e-06 PPR repeat
PPR_2 PF13041 195 - 246 3.2e-06 PPR repeat family
PPR_2 PF13041 329 - 362 2.8e-06 PPR repeat family
PPR PF01535 332 - 360 6.4e-06 PPR repeat
PPR PF01535 363 - 389 5.5e-06 PPR repeat
PPR_2 PF13041 393 - 440 1.3e-07 PPR repeat family
PPR_2 PF13041 493 - 540 1.5e-08 PPR repeat family
PPR PF01535 497 - 526 3.3e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 691
AccB7I CCANNNNNTGG 1 cut(s) 853
AccBSI CCGCTC 1 cut(s) 466
AccI GTMKAC 1 cut(s) 1744
AccII CGCG 2 cut(s) 332, 334
AciI CCGC 3 cut(s) 466, 593, 1431
AclWI GGATC 3 cut(s) 1041, 1913, 1926
AcoI YGGCCR 3 cut(s) 124, 139, 1738
AcsI RAATTY 2 cut(s) 1945, 2051
AcuI CTGAAG 1 cut(s) 41
AfaI GTAC 6 cut(s) 9, 221, 1115, 1282, 1971, 1996
AfiI CCNNNNNNNGG 2 cut(s) 853, 1696
AgsI TTSAA 8 cut(s) 448, 878, 1157, 1382, 1769, 1784, 1906, 2051
AjnI CCWGG 2 cut(s) 1118, 1921
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AluBI AGCT 6 cut(s) 441, 851, 1150, 1490, 1499, 1754
AluI AGCT 6 cut(s) 441, 851, 1150, 1490, 1499, 1754
Alw21I GWGCWC 2 cut(s) 1353, 1519
Alw26I GTCTC 2 cut(s) 199, 1170
Alw44I GTGCAC 1 cut(s) 1515
AlwI GGATC 3 cut(s) 1041, 1913, 1926
Ama87I CYCGRG 1 cut(s) 892
AoxI GGCC 5 cut(s) 124, 139, 772, 1630, 1738
ApaLI GTGCAC 1 cut(s) 1515
ApeKI GCWGC 3 cut(s) 1298, 1487, 1589
ApoI RAATTY 2 cut(s) 1945, 2051
AseI ATTAAT 1 cut(s) 1506
AspLEI GCGC 2 cut(s) 332, 334
AspS9I GGNCC 1 cut(s) 290
AsuC2I CCSGG 3 cut(s) 217, 340, 388
AsuHPI GGTGA 5 cut(s) 391, 523, 695, 1139, 1467
AsuII TTCGAA 1 cut(s) 1424
AsuNHI GCTAGC 1 cut(s) 437
AvaI CYCGRG 1 cut(s) 892
AvaII GGWCC 1 cut(s) 290
BaeGI GKGCMC 1 cut(s) 1519
BamHI GGATCC 1 cut(s) 1918
BanI GGYRCC 1 cut(s) 691
Bbv12I GWGCWC 2 cut(s) 1353, 1519
BbvI GCAGC 3 cut(s) 1285, 1499, 1576
BccI CCATC 8 cut(s) 538, 629, 754, 931, 965, 1784, 1828, 1992
BceAI ACGGC 1 cut(s) 1725
BcgI CGANNNNNNTGC 2 cut(s) 148, 182
BciT130I CCWGG 2 cut(s) 1120, 1923
BclI TGATCA 1 cut(s) 1365
BcnI CCSGG 3 cut(s) 217, 340, 388
BcoDI GTCTC 2 cut(s) 199, 1170
BfaI CTAG 4 cut(s) 438, 1634, 1884, 2085
BfmI CTRYAG 1 cut(s) 1083
BglII AGATCT 1 cut(s) 1720
BisI GCNGC 4 cut(s) 594, 1299, 1488, 1590
BlpI GCTNAGC 2 cut(s) 462, 1851
BlsI GCNGC 4 cut(s) 595, 1300, 1489, 1591
Bme1390I CCNGG 5 cut(s) 217, 340, 388, 1120, 1923
Bme18I GGWCC 1 cut(s) 290
BmeT110I CYCGRG 1 cut(s) 892
BmgT120I GGNCC 1 cut(s) 290
BmiI GGNNCC 2 cut(s) 693, 1920
BmrFI CCNGG 5 cut(s) 217, 340, 388, 1120, 1923
BmrI ACTGGG 2 cut(s) 749, 1354
BmsI GCATC 9 cut(s) 280, 448, 504, 564, 943, 1435, 1446, 1916, 2029
BmtI GCTAGC 1 cut(s) 441
BmuI ACTGGG 2 cut(s) 749, 1354
BplI GAGNNNNNCTC 2 cut(s) 1797, 1829
BpmI CTGGAG 1 cut(s) 1102
Bpu1102I GCTNAGC 2 cut(s) 462, 1851
Bpu14I TTCGAA 1 cut(s) 1424
BpuEI CTTGAG 1 cut(s) 1355
BpuMI CCSGG 3 cut(s) 217, 340, 388
Bsa29I ATCGAT 1 cut(s) 935
BsaI GGTCTC 1 cut(s) 1170
BsaJI CCNNGG 1 cut(s) 1324
BsaXI ACNNNNNCTCC 2 cut(s) 1335, 1365
Bsc4I CCNNNNNNNGG 2 cut(s) 853, 1696
Bse118I RCCGGY 2 cut(s) 122, 137
Bse1I ACTGG 2 cut(s) 744, 1360
Bse3DI GCAATG 3 cut(s) 150, 539, 1815
BseBI CCWGG 2 cut(s) 1120, 1923
BseCI ATCGAT 1 cut(s) 935
BseDI CCNNGG 1 cut(s) 1324
BseGI GGATG 9 cut(s) 463, 579, 592, 765, 1454, 1578, 1839, 1931, 1984
BseLI CCNNNNNNNGG 2 cut(s) 853, 1696
BseMI GCAATG 3 cut(s) 150, 539, 1815
BseMII CTCAG 3 cut(s) 453, 1527, 1842
BseNI ACTGG 2 cut(s) 744, 1360
BsePI GCGCGC 1 cut(s) 330
BseRI GAGGAG 4 cut(s) 491, 1247, 1663, 1883
BseSI GKGCMC 1 cut(s) 1519
BseXI GCAGC 3 cut(s) 1285, 1499, 1576
BsgI GTGCAG 1 cut(s) 1282
Bsh1236I CGCG 2 cut(s) 332, 334
BshFI GGCC 5 cut(s) 126, 141, 774, 1632, 1740
BshNI GGYRCC 1 cut(s) 691
BshVI ATCGAT 1 cut(s) 935
BsiHKAI GWGCWC 2 cut(s) 1353, 1519
BsiHKCI CYCGRG 1 cut(s) 892
BsiSI CCGG 5 cut(s) 123, 138, 216, 339, 387
BslFI GGGAC 2 cut(s) 257, 1356
BslI CCNNNNNNNGG 2 cut(s) 853, 1696
BsmAI GTCTC 2 cut(s) 199, 1170
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 2 cut(s) 257, 1356
BsnI GGCC 5 cut(s) 126, 141, 774, 1632, 1740
Bso31I GGTCTC 1 cut(s) 1170
BsoBI CYCGRG 1 cut(s) 892
Bsp119I TTCGAA 1 cut(s) 1424
Bsp1286I GDGCHC 2 cut(s) 1353, 1519
Bsp1407I TGTACA 1 cut(s) 1969
Bsp143I GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
Bsp1720I GCTNAGC 2 cut(s) 462, 1851
BspACI CCGC 3 cut(s) 466, 593, 1431
BspANI GGCC 5 cut(s) 126, 141, 774, 1632, 1740
BspCNI CTCAG 3 cut(s) 454, 1528, 1843
BspDI ATCGAT 1 cut(s) 935
BspFNI CGCG 2 cut(s) 332, 334
BspLI GGNNCC 2 cut(s) 693, 1920
BspOI GCTAGC 1 cut(s) 441
BspPI GGATC 3 cut(s) 1041, 1913, 1926
BspT104I TTCGAA 1 cut(s) 1424
BspT107I GGYRCC 1 cut(s) 691
BspTNI GGTCTC 1 cut(s) 1170
BsrBI CCGCTC 1 cut(s) 466
BsrDI GCAATG 3 cut(s) 150, 539, 1815
BsrFI RCCGGY 2 cut(s) 122, 137
BsrGI TGTACA 1 cut(s) 1969
BsrI ACTGG 2 cut(s) 744, 1360
BssAI RCCGGY 2 cut(s) 122, 137
BssECI CCNNGG 1 cut(s) 1324
BssHII GCGCGC 1 cut(s) 330
BssMI GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
BssT1I CCWWGG 1 cut(s) 1324
Bst2UI CCWGG 2 cut(s) 1120, 1923
Bst4CI ACNGT 6 cut(s) 190, 307, 1280, 1597, 1706, 2077
Bst6I CTCTTC 1 cut(s) 620
BstAUI TGTACA 1 cut(s) 1969
BstBI TTCGAA 1 cut(s) 1424
BstC8I GCNNGC 6 cut(s) 157, 328, 332, 439, 1618, 1711
BstDEI CTNAG 3 cut(s) 462, 1536, 1851
BstF5I GGATG 9 cut(s) 463, 579, 592, 765, 1454, 1578, 1839, 1931, 1984
BstFNI CGCG 2 cut(s) 332, 334
BstHHI GCGC 2 cut(s) 332, 334
BstKTI GATC 6 cut(s) 1036, 1289, 1368, 1723, 1878, 1921
BstMAI GTCTC 2 cut(s) 199, 1170
BstMBI GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
BstMWI GCNNNNNNNGC 3 cut(s) 138, 911, 1496
BstNI CCWGG 2 cut(s) 1120, 1923
BstNSI RCATGY 1 cut(s) 1713
BstSCI CCNGG 5 cut(s) 215, 338, 386, 1118, 1921
BstSFI CTRYAG 1 cut(s) 1083
BstSLI GKGCMC 1 cut(s) 1519
BstUI CGCG 2 cut(s) 332, 334
BstV1I GCAGC 3 cut(s) 1285, 1499, 1576
BstX2I RGATCY 2 cut(s) 1720, 1918
BstYI RGATCY 2 cut(s) 1720, 1918
Bsu15I ATCGAT 1 cut(s) 935
BsuRI GGCC 5 cut(s) 126, 141, 774, 1632, 1740
BsuTUI ATCGAT 1 cut(s) 935
BtgZI GCGATG 1 cut(s) 1040
BtsCI GGATG 9 cut(s) 463, 579, 592, 765, 1454, 1578, 1839, 1931, 1984
BtsI GCAGTG 1 cut(s) 127
BtsIMutI CAGTG 6 cut(s) 17, 127, 321, 786, 1440, 1702
Cac8I GCNNGC 6 cut(s) 157, 328, 332, 439, 1618, 1711
CfoI GCGC 2 cut(s) 332, 334
Cfr10I RCCGGY 2 cut(s) 122, 137
Cfr13I GGNCC 1 cut(s) 290
ClaI ATCGAT 1 cut(s) 935
CseI GACGC 1 cut(s) 254
Csp6I GTAC 6 cut(s) 8, 220, 1114, 1281, 1970, 1995
CviQI GTAC 6 cut(s) 8, 220, 1114, 1281, 1970, 1995
DdeI CTNAG 3 cut(s) 462, 1536, 1851
DpnI GATC 6 cut(s) 1035, 1288, 1367, 1722, 1877, 1920
DpnII GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
DraI TTTAAA 1 cut(s) 900
EaeI YGGCCR 3 cut(s) 124, 139, 1738
Eam1104I CTCTTC 1 cut(s) 620
EarI CTCTTC 1 cut(s) 620
Eco130I CCWWGG 1 cut(s) 1324
Eco31I GGTCTC 1 cut(s) 1170
Eco47I GGWCC 1 cut(s) 290
Eco57I CTGAAG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 892
EcoRII CCWGG 2 cut(s) 1118, 1921
EcoT14I CCWWGG 1 cut(s) 1324
EcoT22I ATGCAT 3 cut(s) 273, 916, 1715
ErhI CCWWGG 1 cut(s) 1324
Esp3I CGTCTC 1 cut(s) 199
FaqI GGGAC 2 cut(s) 257, 1356
FauI CCCGC 2 cut(s) 459, 1424
FbaI TGATCA 1 cut(s) 1365
FblI GTMKAC 1 cut(s) 1744
Fnu4HI GCNGC 4 cut(s) 594, 1299, 1488, 1590
FokI GGATG 9 cut(s) 470, 586, 599, 772, 1441, 1565, 1846, 1938, 1971
Fsp4HI GCNGC 4 cut(s) 594, 1299, 1488, 1590
FspBI CTAG 4 cut(s) 438, 1634, 1884, 2085
GlaI GCGC 2 cut(s) 331, 333
GluI GCNGC 4 cut(s) 594, 1299, 1488, 1590
GsuI CTGGAG 1 cut(s) 1102
HaeIII GGCC 5 cut(s) 126, 141, 774, 1632, 1740
HapII CCGG 5 cut(s) 123, 138, 216, 339, 387
HgaI GACGC 1 cut(s) 254
HhaI GCGC 2 cut(s) 332, 334
Hin6I GCGC 2 cut(s) 330, 332
HinP1I GCGC 2 cut(s) 330, 332
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HinfI GANTC 8 cut(s) 237, 299, 406, 713, 989, 1382, 1575, 1936
HpaII CCGG 5 cut(s) 123, 138, 216, 339, 387
HphI GGTGA 5 cut(s) 391, 523, 695, 1139, 1467
Hpy166II GTNNAC 7 cut(s) 60, 705, 856, 1114, 1517, 1745, 2080
Hpy188I TCNGA 3 cut(s) 1410, 1537, 2025
Hpy188III TCNNGA 4 cut(s) 403, 1241, 1334, 1369
Hpy8I GTNNAC 7 cut(s) 60, 705, 856, 1114, 1517, 1745, 2080
Hpy99I CGWCG 2 cut(s) 173, 194
HpyAV CCTTC 4 cut(s) 577, 872, 979, 1637
HpyCH4III ACNGT 6 cut(s) 190, 307, 1280, 1597, 1706, 2077
HpyF10VI GCNNNNNNNGC 3 cut(s) 138, 911, 1496
HpyF3I CTNAG 3 cut(s) 462, 1536, 1851
HspAI GCGC 2 cut(s) 330, 332
Ksp22I TGATCA 1 cut(s) 1365
Kzo9I GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
LmnI GCTCC 4 cut(s) 323, 1356, 1805, 2017
Lsp1109I GCAGC 3 cut(s) 1285, 1499, 1576
LweI GCATC 9 cut(s) 280, 448, 504, 564, 943, 1435, 1446, 1916, 2029
MaeI CTAG 4 cut(s) 438, 1634, 1884, 2085
MaeIII GTNAC 4 cut(s) 307, 536, 1183, 1252
MalI GATC 6 cut(s) 1035, 1288, 1367, 1722, 1877, 1920
MbiI CCGCTC 1 cut(s) 466
MboI GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
MboII GAAGA 8 cut(s) 592, 637, 644, 1083, 1169, 1715, 1781, 1885
MflI RGATCY 2 cut(s) 1720, 1918
MhlI GDGCHC 2 cut(s) 1353, 1519
MluCI AATT 5 cut(s) 1003, 1901, 1945, 1961, 2051
MlyI GAGTC 1 cut(s) 707
MmeI TCCRAC 5 cut(s) 372, 633, 799, 1378, 1913
Mph1103I ATGCAT 3 cut(s) 273, 916, 1715
MseI TTAA 6 cut(s) 899, 1014, 1461, 1506, 1565, 1664
MslI CAYNNNNRTG 1 cut(s) 276
MspI CCGG 5 cut(s) 123, 138, 216, 339, 387
MspR9I CCNGG 5 cut(s) 217, 340, 388, 1120, 1923
MvaI CCWGG 2 cut(s) 1120, 1923
MvnI CGCG 2 cut(s) 332, 334
MwoI GCNNNNNNNGC 3 cut(s) 138, 911, 1496
NciI CCSGG 3 cut(s) 217, 340, 388
NdeII GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
NheI GCTAGC 1 cut(s) 437
NlaIV GGNNCC 2 cut(s) 693, 1920
NmuCI GTSAC 2 cut(s) 1183, 1252
NsiI ATGCAT 3 cut(s) 273, 916, 1715
NspI RCATGY 1 cut(s) 1713
NspV TTCGAA 1 cut(s) 1424
PaeI GCATGC 1 cut(s) 1713
PauI GCGCGC 1 cut(s) 330
PcsI WCGNNNNNNNCGW 1 cut(s) 1738
PfeI GAWTC 7 cut(s) 237, 299, 406, 989, 1382, 1575, 1936
PflMI CCANNNNNTGG 1 cut(s) 853
PfoI TCCNGGA 2 cut(s) 1118, 1921
PkrI GCNGC 4 cut(s) 595, 1300, 1489, 1591
PleI GAGTC 1 cut(s) 707
PpsI GAGTC 1 cut(s) 707
PshBI ATTAAT 1 cut(s) 1506
Psp6I CCWGG 2 cut(s) 1118, 1921
PspGI CCWGG 2 cut(s) 1118, 1921
PspN4I GGNNCC 2 cut(s) 693, 1920
PspPI GGNCC 1 cut(s) 290
PsuI RGATCY 2 cut(s) 1720, 1918
PteI GCGCGC 1 cut(s) 330
RsaI GTAC 6 cut(s) 9, 221, 1115, 1282, 1971, 1996
RsaNI GTAC 6 cut(s) 8, 220, 1114, 1281, 1970, 1995
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 6 cut(s) 899, 1014, 1461, 1506, 1565, 1664
SatI GCNGC 4 cut(s) 594, 1299, 1488, 1590
Sau3AI GATC 6 cut(s) 1033, 1286, 1365, 1720, 1875, 1918
Sau96I GGNCC 1 cut(s) 290
SchI GAGTC 1 cut(s) 707
ScrFI CCNGG 5 cut(s) 217, 340, 388, 1120, 1923
SduI GDGCHC 2 cut(s) 1353, 1519
SfaNI GCATC 9 cut(s) 280, 448, 504, 564, 943, 1435, 1446, 1916, 2029
SfcI CTRYAG 1 cut(s) 1083
SfuI TTCGAA 1 cut(s) 1424
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 1 cut(s) 1334
SmoI CTYRAG 1 cut(s) 1334
SphI GCATGC 1 cut(s) 1713
Sse9I AATT 5 cut(s) 1003, 1901, 1945, 1961, 2051
SsiI CCGC 3 cut(s) 466, 593, 1431
SspMI CTAG 4 cut(s) 438, 1634, 1884, 2085
StyD4I CCNGG 5 cut(s) 215, 338, 386, 1118, 1921
StyI CCWWGG 1 cut(s) 1324
TaaI ACNGT 6 cut(s) 190, 307, 1280, 1597, 1706, 2077
TaqI TCGA 8 cut(s) 147, 168, 224, 402, 711, 935, 1385, 1424
TaqII GACCGA 1 cut(s) 1722
TasI AATT 5 cut(s) 1003, 1901, 1945, 1961, 2051
TatI WGTACW 2 cut(s) 1113, 1969
TauI GCSGC 1 cut(s) 596
TfiI GAWTC 7 cut(s) 237, 299, 406, 989, 1382, 1575, 1936
Tru1I TTAA 6 cut(s) 899, 1014, 1461, 1506, 1565, 1664
Tru9I TTAA 6 cut(s) 899, 1014, 1461, 1506, 1565, 1664
TscAI CASTG 6 cut(s) 24, 134, 321, 786, 1447, 1709
TseFI GTSAC 2 cut(s) 1183, 1252
TseI GCWGC 3 cut(s) 1298, 1487, 1589
Tsp45I GTSAC 2 cut(s) 1183, 1252
TspRI CASTG 6 cut(s) 24, 134, 321, 786, 1447, 1709
Van91I CCANNNNNTGG 1 cut(s) 853
VneI GTGCAC 1 cut(s) 1515
VpaK11BI GGWCC 1 cut(s) 290
VspI ATTAAT 1 cut(s) 1506
XapI RAATTY 2 cut(s) 1945, 2051
XceI RCATGY 1 cut(s) 1713
XmiI GTMKAC 1 cut(s) 1744
XspI CTAG 4 cut(s) 438, 1634, 1884, 2085
Zsp2I ATGCAT 3 cut(s) 273, 916, 1715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.