Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0010344

Physical Location & Seq

Genomic Coordinates Reverse (-)

57321898 .. 57327004

Gene Structure 5107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0487700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGTCTTCCAAGTCCAAATCTAGTGTATCTGAAACTCCTAAAAAGGCAGCATCTGAAATTCCTAAGAAAGCAGCATCTGAAACTCCTAAGAAAGCATCACCAGCAACCCCGCGAGTGAGTAAACTGAGCAGGGCAGTGGGAGCTGGAGCGGGAGCGGGAGCGGGAGCGGCTGCTAAATCAGAATCCGATTCAGCAGCATCTCCTTCTCCTTTGCAGAATTCTCGCCTTTCAATTGATCGGTCCCCGCGCCCTGTCAACTCCCCCAAGCCAACAACAATTGAGCGTCGATCACCCAAGATCACTACCCCGCCGCCAGCTGAAAAACAACCCACACGGGGCACTAAGGGATCAGAATTACAGGCTCAGTTGAGTCTTGTTCAGGAAGATCTAAAGAAAGCAAAGGAGCAGATAGATTTGATTGAAAAAGAGAAGGCAAAAGCAATCGATGATTTGAAAGAAGCACAGAGAGTGTCTGAGGAGGCAAATGAGAAGCTCAGAGATGCCTTGGTGGCTCAAAAGCGAGCCCAAGAGGATTCAGAAATCGAAAAGTTTCGTGCTGTTGAGTTGGAACAGGCAGGAATTGAAGCAGCCCAGAAGAAGGAAGGTGAATGGGAGAAAGAGCTTGAAGCTGTTAGGAATCAGCATGCGCTGGATGTGGCTACTCTACTCTCTACTACTCAAGAACTTCAAAAGCTGAAGCAAGAACTGACCATGACCTGTGATGCAAAAAACCAGGCACTGAACCATGCTGATGATGCAACTAAGATTGCTGAGATTCATGTCGAGAAGGTGGAGATTCTCTCGGCTGAGTTGACCCGGTTGAAGGGCTTACTAGAATCGAAGCAGGAATCAGAGACTAGTGAACATAGCAAGATGGTGCTTCAGCTTGAATCAGAGGTAGAATCTCTCAAGCTGCAACTTGAGAAAGCAAAAGGTTACGAGGAGAGATTGATGGAGAAAGAGACTTCCATTGAACAGCTTAACGTTGAGCTTGAGTCAGCCAAGATGGCTGAATCTTATGCTCACAGTATTGTTGAGGAGTGGAAAATTAGGGTTGAGGAATTAGAGATGCAGGTTGAGGAAGCAAATAAGGCAGAGAAATCTGCATCAGAATCTTTAGATTCAGTCATGAAACAACTAGAGGGAAACCATGACTTATTGCACGATGCAGAATCTGAAATTGCTGCTCTTAAAGAGAAGGTGAGTTTGCTGGAAATGACAATTGTAAGACATAGAGGAGATCTTGAGGAATCAGAACGCTGTCTTGGTACGACCAAGGAAGAAAATCAGAAAATGACAAAAATGGTTGAGTCACTTAAGTCTGAGCTCGAAACTGTGAAGGAGGAGAAATTGCAGGCTTTAAGCAATGAGAAACTTGCAGCATCAAGTGTTCAAAGCCTGTTAGAAGAAAAAAACAAACTCATAAATGAGTTGGAACATTCCAGGGATGAAGAAGAGAAGAGCAAAAAAGCAATGGAAAGCTTAGCTTCTGCCCTACATGAAGTCTCCACAGAAGCTAGAGAAGCAAAAGAAAAGCTGCTAACCAATCAAGCGGAGCACGATAGTTATGAGTTGCAGATAGAAGACCTTAAAATGGTCTTGAAAGCAACCAATGAAAAGCATGAAGCCATAATTGATGATGCAAAACATGAAATTCATCTTCTTACAAGTAATGTAGAACAATGCAAGACTGAGTTACAACATGCGAAGGCTGACTGGGAGCAAAAAGAACTTCACCTGGTGAATTCTGTAAAGCATTCAGAAGAAGAAAACTCTTCTATGGAAAAAGAAATAAACAGGCTGCTAAATTTGCTCAAAAGCACCGAGGAAGAAGCTTGTGCTATGAAGGAAGAAGAAGCGCAGTTGAAAGATAGCATGAAGGAAGTTGAATCTGAGGTTATCTGTTTGCAGGAAGCTGTTGCAGAAGCAAAGGCTGAGAACATGAAACTAAAGGAAAGCATATTGGACAAAGAAAATGAGTTCCAGAGTGTTATACATGAAAATGAGGAGCTCCAGAACAGGGAGGCTGCTTCTCATAAGAAGGTGGAGGAATTGTCAAAGCTACTTGAAGAAGCTGTGGCCAAGAAGCAAGCCGAGGAAAATGGTGAGCTAACGGACAGTGAGAAGGACTATGATTTGCTTCCTAAGGTAGTCGAATTCTCTGAAGAGAATGGGCATGGAAGAGAAGAGAAACTCAAAGTGGAGCTTCCACCACCTCAAAGTGTGGAACCGAAGAGTGAAAATTTATGCCAAGAGAATAATGTCTCGAATGGCAAGGCTGAACATGTGGATTCTGCTCAAATCGACACTCTGAATGGGAAACCGAAAGGTGATGAGAGCAAAGAGAAAGAAGATGACTCCGTAGAAGTTGAATATAAAATGTGGGAGAGCTGCAAGATTGAAAAGAAGGAATTTTCGCCAGAGAGAGAACAGGAGCAGGAATCGTTCGAAGAGGAAGTGAACTCAAAGGGGGATGGTGGTGAGAAATTGGATCAAATAAATGGATTAACTTCAACTGAAAGTGTTGATGACAGTGCAACTTCTCCATCAAAGCAGCAACAACAGAAGAAGAAGAAGCCTTTACTCCGCAAATTTGGAAGCCTTCTCAAGAAGAAGGGCACTAGCAACAACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006355 GO:0006417 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0043487 GO:0043488 GO:0044424 GO:0044444 GO:0044464 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903311 GO:1903313 GO:1903506 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

878

Amino Acids

98.37

Weight (kDa)

5.01

Isoelectric Point (pI)

55.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	118 - 515	2.7e-18	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010344)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19360 AT3G19360
fragaria_vesca	FvH4_1g03610 FvH4_1g03610
malus_domestica	MD02G1035700.v1.1 MD15G1175900.v1.1
prunus_persica	Prupe.7G239500_v2.0.a1
pyrus_communis	pycom02g02950 pycom15g15790
rosa_chinensis	RchiOBHm_Chr2g0089141
rosa_laevigata	RLG00000015995
rosa_multiflora	Rmu_sc0016750.1_g000003 Rmu_sc0029975.1_g000003
rosa_roxburghii	Rroxscaffold_2G00152210
rosa_rugosa	Rorug01G0487700 Rorug01G0487800
rosa_samantha	Rh2AG043300 Rh2BG042100 Rh2CG043400 Rh2DG042400
rosa_wichuraiana	Rw2G003430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1063
AccBSI	CCGCTC	4 cut(s)	149, 155, 161, 167
AccII	CGCG	2 cut(s)	112, 247
AclI	AACGTT	1 cut(s)	984
AclWI	GGATC	2 cut(s)	355, 2499
AcoI	YGGCCR	1 cut(s)	2079
AcsI	RAATTY	9 cut(s)	57, 217, 1653, 1744, 1807, 2156, 2242, 2411, 2591
AcuI	CTGAAG	3 cut(s)	716, 866, 2184
AdeI	CACNNNGTG	1 cut(s)	1741
AfaI	GTAC	1 cut(s)	1270
AfiI	CCNNNNNNNGG	5 cut(s)	335, 598, 823, 1594, 2020
AflII	CTTAAG	1 cut(s)	1316
AflIII	ACRYGT	1 cut(s)	2284
AhlI	ACTAGT	1 cut(s)	857
AjnI	CCWGG	3 cut(s)	732, 1442, 1737
AjuI	GAANNNNNNNTTGG	2 cut(s)	1248, 1280
Alw21I	GWGCWC	3 cut(s)	1329, 1560, 2013
Alw26I	GTCTC	4 cut(s)	848, 956, 1510, 2269
AlwI	GGATC	2 cut(s)	355, 2499
AlwNI	CAGNNNCTG	4 cut(s)	53, 77, 739, 1175
AoxI	GGCC	1 cut(s)	2079
ApoI	RAATTY	9 cut(s)	57, 217, 1653, 1744, 1807, 2156, 2242, 2411, 2591
Asp700I	GAANNNNTTC	1 cut(s)	549
AspLEI	GCGC	3 cut(s)	249, 649, 1861
AspS9I	GGNCC	1 cut(s)	240
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	9 cut(s)	90, 282, 617, 1213, 1727, 1753, 2117, 2342, 2492
AsuII	TTCGAA	1 cut(s)	2448
AvaII	GGWCC	1 cut(s)	240
AxyI	CCTNAGG	1 cut(s)	2145
BaeGI	GKGCMC	2 cut(s)	341, 2621
BalI	TGGCCA	1 cut(s)	2081
BanII	GRGCYC	3 cut(s)	526, 1329, 2013
BbsI	GAAGAC	1 cut(s)	1590
Bbv12I	GWGCWC	3 cut(s)	1329, 1560, 2013
BccI	CCATC	5 cut(s)	868, 946, 1000, 2468, 2554
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciT130I	CCWGG	3 cut(s)	734, 1444, 1739
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	4 cut(s)	848, 956, 1510, 2269
BcuI	ACTAGT	1 cut(s)	857
BfaI	CTAG	6 cut(s)	21, 833, 858, 1139, 1518, 2622
BfrI	CTTAAG	1 cut(s)	1316
BfuAI	ACCTGC	1 cut(s)	1063
BglI	GCCNNNNNGGC	2 cut(s)	509, 1007
BglII	AGATCT	2 cut(s)	385, 1240
BlpI	GCTNAGC	1 cut(s)	1483
Bme1390I	CCNGG	4 cut(s)	734, 817, 1444, 1739
Bme18I	GGWCC	1 cut(s)	240
BmgT120I	GGNCC	1 cut(s)	240
BmiI	GGNNCC	2 cut(s)	242, 2229
BmrFI	CCNGG	4 cut(s)	734, 817, 1444, 1739
BmrI	ACTGGG	1 cut(s)	1726
BmuI	ACTGGG	1 cut(s)	1726
BpiI	GAAGAC	1 cut(s)	1590
BplI	GAGNNNNNCTC	2 cut(s)	785, 817
BpmI	CTGGAG	2 cut(s)	165, 1997
Bpu1102I	GCTNAGC	1 cut(s)	1483
Bpu14I	TTCGAA	1 cut(s)	2448
BpuEI	CTTGAG	6 cut(s)	663, 893, 941, 1013, 1265, 2591
BpuMI	CCSGG	1 cut(s)	817
Bsa29I	ATCGAT	1 cut(s)	444
BsaJI	CCNNGG	5 cut(s)	504, 1275, 1443, 1824, 2094
BsaXI	ACNNNNNCTCC	2 cut(s)	2039, 2069
Bsc4I	CCNNNNNNNGG	5 cut(s)	335, 598, 823, 1594, 2020
Bse1I	ACTGG	1 cut(s)	1721
Bse21I	CCTNAGG	1 cut(s)	2145
Bse3DI	GCAATG	2 cut(s)	1372, 1479
BseBI	CCWGG	3 cut(s)	734, 1444, 1739
BseCI	ATCGAT	1 cut(s)	444
BseDI	CCNNGG	5 cut(s)	504, 1275, 1443, 1824, 2094
BseGI	GGATG	3 cut(s)	658, 1453, 2479
BseLI	CCNNNNNNNGG	5 cut(s)	335, 598, 823, 1594, 2020
BseMI	GCAATG	2 cut(s)	1372, 1479
BseNI	ACTGG	1 cut(s)	1721
BseRI	GAGGAG	6 cut(s)	491, 956, 1052, 1251, 1358, 2021
BseSI	GKGCMC	2 cut(s)	341, 2621
Bsh1236I	CGCG	2 cut(s)	112, 247
BshFI	GGCC	1 cut(s)	2081
BshVI	ATCGAT	1 cut(s)	444
BsiHKAI	GWGCWC	3 cut(s)	1329, 1560, 2013
BsiSI	CCGG	1 cut(s)	817
BslFI	GGGAC	1 cut(s)	226
BslI	CCNNNNNNNGG	5 cut(s)	335, 598, 823, 1594, 2020
BsmAI	GTCTC	4 cut(s)	848, 956, 1510, 2269
BsmFI	GGGAC	1 cut(s)	226
BsmI	GAATGC	1 cut(s)	1756
BsnI	GGCC	1 cut(s)	2081
Bsp119I	TTCGAA	1 cut(s)	2448
Bsp1286I	GDGCHC	6 cut(s)	341, 526, 1329, 1560, 2013, 2621
Bsp143I	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
Bsp1720I	GCTNAGC	1 cut(s)	1483
BspANI	GGCC	1 cut(s)	2081
BspDI	ATCGAT	1 cut(s)	444
BspFNI	CGCG	2 cut(s)	112, 247
BspHI	TCATGA	1 cut(s)	1128
BspLI	GGNNCC	2 cut(s)	242, 2229
BspMI	ACCTGC	1 cut(s)	1063
BspPI	GGATC	2 cut(s)	355, 2499
BspQI	GCTCTTC	1 cut(s)	1454
BspT104I	TTCGAA	1 cut(s)	2448
BspTI	CTTAAG	1 cut(s)	1316
BsrBI	CCGCTC	4 cut(s)	149, 155, 161, 167
BsrDI	GCAATG	2 cut(s)	1372, 1479
BsrI	ACTGG	1 cut(s)	1721
BssECI	CCNNGG	5 cut(s)	504, 1275, 1443, 1824, 2094
BssMI	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
BssT1I	CCWWGG	2 cut(s)	504, 1275
Bst2UI	CCWGG	3 cut(s)	734, 1444, 1739
Bst4CI	ACNGT	4 cut(s)	1028, 1336, 2120, 2534
Bst6I	CTCTTC	8 cut(s)	1449, 1454, 1780, 2160, 2176, 2181, 2228, 2445
BstAFI	CTTAAG	1 cut(s)	1316
BstBI	TTCGAA	1 cut(s)	2448
BstC8I	GCNNGC	5 cut(s)	315, 522, 645, 1356, 2091
BstF5I	GGATG	3 cut(s)	658, 1453, 2479
BstFNI	CGCG	2 cut(s)	112, 247
BstHHI	GCGC	3 cut(s)	249, 649, 1861
BstKTI	GATC	7 cut(s)	238, 290, 300, 350, 388, 1243, 2494
BstMAI	GTCTC	4 cut(s)	848, 956, 1510, 2269
BstMBI	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 140, 167, 509, 755, 1007, 1091, 1523, 1810
BstNI	CCWGG	3 cut(s)	734, 1444, 1739
BstNSI	RCATGY	3 cut(s)	647, 1706, 2288
BstSCI	CCNGG	4 cut(s)	732, 815, 1442, 1737
BstSLI	GKGCMC	2 cut(s)	341, 2621
BstUI	CGCG	2 cut(s)	112, 247
BstV2I	GAAGAC	1 cut(s)	1590
BstX2I	RGATCY	2 cut(s)	385, 1240
BstYI	RGATCY	2 cut(s)	385, 1240
Bsu15I	ATCGAT	1 cut(s)	444
Bsu36I	CCTNAGG	1 cut(s)	2145
BsuRI	GGCC	1 cut(s)	2081
BsuTUI	ATCGAT	1 cut(s)	444
BtsCI	GGATG	3 cut(s)	658, 1453, 2479
BtsI	GCAGTG	1 cut(s)	141
BtsIMutI	CAGTG	4 cut(s)	141, 737, 2125, 2539
BveI	ACCTGC	1 cut(s)	1063
Cac8I	GCNNGC	5 cut(s)	315, 522, 645, 1356, 2091
CaiI	CAGNNNCTG	4 cut(s)	53, 77, 739, 1175
CciI	TCATGA	1 cut(s)	1128
CfoI	GCGC	3 cut(s)	249, 649, 1861
Cfr13I	GGNCC	1 cut(s)	240
ClaI	ATCGAT	1 cut(s)	444
CseI	GACGC	1 cut(s)	272
CsiI	ACCWGGT	1 cut(s)	1737
Csp6I	GTAC	1 cut(s)	1269
CviQI	GTAC	1 cut(s)	1269
DpnI	GATC	7 cut(s)	237, 289, 299, 349, 387, 1242, 2493
DpnII	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
DraIII	CACNNNGTG	1 cut(s)	1741
EaeI	YGGCCR	1 cut(s)	2079
Eam1104I	CTCTTC	8 cut(s)	1449, 1454, 1780, 2160, 2176, 2181, 2228, 2445
EarI	CTCTTC	8 cut(s)	1449, 1454, 1780, 2160, 2176, 2181, 2228, 2445
Ecl136II	GAGCTC	2 cut(s)	1327, 2011
Eco130I	CCWWGG	2 cut(s)	504, 1275
Eco24I	GRGCYC	3 cut(s)	526, 1329, 2013
Eco47I	GGWCC	1 cut(s)	240
Eco53kI	GAGCTC	2 cut(s)	1327, 2011
Eco57I	CTGAAG	3 cut(s)	716, 866, 2184
Eco81I	CCTNAGG	1 cut(s)	2145
EcoICRI	GAGCTC	2 cut(s)	1327, 2011
EcoRI	GAATTC	3 cut(s)	217, 1744, 2156
EcoRII	CCWGG	3 cut(s)	732, 1442, 1737
EcoT14I	CCWWGG	2 cut(s)	504, 1275
EcoT38I	GRGCYC	3 cut(s)	526, 1329, 2013
ErhI	CCWWGG	2 cut(s)	504, 1275
FalI	AAGNNNNNCTT	4 cut(s)	1471, 1503, 2190, 2222
FaqI	GGGAC	1 cut(s)	226
FauI	CCCGC	6 cut(s)	117, 142, 148, 154, 252, 315
FokI	GGATG	3 cut(s)	665, 1460, 2486
FriOI	GRGCYC	3 cut(s)	526, 1329, 2013
FspBI	CTAG	6 cut(s)	21, 833, 858, 1139, 1518, 2622
GlaI	GCGC	3 cut(s)	248, 648, 1860
GsuI	CTGGAG	2 cut(s)	165, 1997
HaeIII	GGCC	1 cut(s)	2081
HapII	CCGG	1 cut(s)	817
HgaI	GACGC	1 cut(s)	272
HhaI	GCGC	3 cut(s)	249, 649, 1861
Hin6I	GCGC	3 cut(s)	247, 647, 1859
HinP1I	GCGC	3 cut(s)	247, 647, 1859
HincII	GTYRAC	2 cut(s)	256, 813
HindII	GTYRAC	2 cut(s)	256, 813
HindIII	AAGCTT	2 cut(s)	1480, 1833
HpaII	CCGG	1 cut(s)	817
HphI	GGTGA	9 cut(s)	90, 282, 617, 1213, 1727, 1753, 2117, 2342, 2492
Hpy166II	GTNNAC	5 cut(s)	122, 256, 813, 863, 2461
Hpy8I	GTNNAC	5 cut(s)	122, 256, 813, 863, 2461
Hpy99I	CGWCG	1 cut(s)	288
HpyCH4III	ACNGT	4 cut(s)	1028, 1336, 2120, 2534
HpyCH4IV	ACGT	1 cut(s)	984
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 140, 167, 509, 755, 1007, 1091, 1523, 1810
HpySE526I	ACGT	1 cut(s)	984
HspAI	GCGC	3 cut(s)	247, 647, 1859
Kzo9I	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
LguI	GCTCTTC	1 cut(s)	1454
MabI	ACCWGGT	1 cut(s)	1737
MaeI	CTAG	6 cut(s)	21, 833, 858, 1139, 1518, 2622
MaeII	ACGT	1 cut(s)	984
MaeIII	GTNAC	3 cut(s)	935, 1311, 1695
MalI	GATC	7 cut(s)	237, 289, 299, 349, 387, 1242, 2493
MbiI	CCGCTC	4 cut(s)	149, 155, 161, 167
MboI	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
MfeI	CAATTG	3 cut(s)	231, 276, 1221
MflI	RGATCY	2 cut(s)	385, 1240
MhlI	GDGCHC	6 cut(s)	341, 526, 1329, 1560, 2013, 2621
MlsI	TGGCCA	1 cut(s)	2081
MluNI	TGGCCA	1 cut(s)	2081
MlyI	GAGTC	4 cut(s)	379, 1004, 1319, 2351
MmeI	TCCRAC	2 cut(s)	546, 1413
Mox20I	TGGCCA	1 cut(s)	2081
MroXI	GAANNNNTTC	1 cut(s)	549
MscI	TGGCCA	1 cut(s)	2081
MseI	TTAA	6 cut(s)	981, 1191, 1317, 1361, 1590, 2507
MslI	CAYNNNNRTG	2 cut(s)	750, 2001
Msp20I	TGGCCA	1 cut(s)	2081
MspA1I	CMGCKG	1 cut(s)	317
MspCI	CTTAAG	1 cut(s)	1316
MspI	CCGG	1 cut(s)	817
MspR9I	CCNGG	4 cut(s)	734, 817, 1444, 1739
MunI	CAATTG	3 cut(s)	231, 276, 1221
Mva1269I	GAATGC	1 cut(s)	1756
MvaI	CCWGG	3 cut(s)	734, 1444, 1739
MvnI	CGCG	2 cut(s)	112, 247
MwoI	GCNNNNNNNGC	9 cut(s)	101, 140, 167, 509, 755, 1007, 1091, 1523, 1810
NciI	CCSGG	1 cut(s)	817
NdeII	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
NlaIV	GGNNCC	2 cut(s)	242, 2229
NmeAIII	GCCGAG	2 cut(s)	782, 2119
NmuCI	GTSAC	1 cut(s)	1311
NspI	RCATGY	3 cut(s)	647, 1706, 2288
NspV	TTCGAA	1 cut(s)	2448
PaeI	GCATGC	1 cut(s)	647
PagI	TCATGA	1 cut(s)	1128
PciI	ACATGT	1 cut(s)	2284
PciSI	GCTCTTC	1 cut(s)	1454
PctI	GAATGC	1 cut(s)	1756
PdmI	GAANNNNTTC	1 cut(s)	549
PleI	GAGTC	4 cut(s)	378, 1003, 1318, 2351
PpsI	GAGTC	4 cut(s)	378, 1003, 1318, 2351
PscI	ACATGT	1 cut(s)	2284
Psp124BI	GAGCTC	2 cut(s)	1329, 2013
Psp1406I	AACGTT	1 cut(s)	984
Psp6I	CCWGG	3 cut(s)	732, 1442, 1737
PspGI	CCWGG	3 cut(s)	732, 1442, 1737
PspN4I	GGNNCC	2 cut(s)	242, 2229
PspPI	GGNCC	1 cut(s)	240
PstNI	CAGNNNCTG	4 cut(s)	53, 77, 739, 1175
PsuI	RGATCY	2 cut(s)	385, 1240
PvuII	CAGCTG	1 cut(s)	317
RsaI	GTAC	1 cut(s)	1270
RsaNI	GTAC	1 cut(s)	1269
RseI	CAYNNNNRTG	2 cut(s)	750, 2001
SacI	GAGCTC	2 cut(s)	1329, 2013
SapI	GCTCTTC	1 cut(s)	1454
SaqAI	TTAA	6 cut(s)	981, 1191, 1317, 1361, 1590, 2507
Sau3AI	GATC	7 cut(s)	235, 287, 297, 347, 385, 1240, 2491
Sau96I	GGNCC	1 cut(s)	240
SchI	GAGTC	4 cut(s)	379, 1004, 1319, 2351
ScrFI	CCNGG	4 cut(s)	734, 817, 1444, 1739
SduI	GDGCHC	6 cut(s)	341, 526, 1329, 1560, 2013, 2621
SexAI	ACCWGGT	1 cut(s)	1737
SfuI	TTCGAA	1 cut(s)	2448
SinI	GGWCC	1 cut(s)	240
SmiMI	CAYNNNNRTG	2 cut(s)	750, 2001
SmlI	CTYRAG	7 cut(s)	678, 908, 920, 992, 1244, 1316, 2606
SmoI	CTYRAG	7 cut(s)	678, 908, 920, 992, 1244, 1316, 2606
SpeI	ACTAGT	1 cut(s)	857
SphI	GCATGC	1 cut(s)	647
SspMI	CTAG	6 cut(s)	21, 833, 858, 1139, 1518, 2622
SstI	GAGCTC	2 cut(s)	1329, 2013
StyD4I	CCNGG	4 cut(s)	732, 815, 1442, 1737
StyI	CCWWGG	2 cut(s)	504, 1275
TaaI	ACNGT	4 cut(s)	1028, 1336, 2120, 2534
TaiI	ACGT	1 cut(s)	987
TaqII	GACCGA	1 cut(s)	228
TauI	GCSGC	2 cut(s)	170, 313
Tru1I	TTAA	6 cut(s)	981, 1191, 1317, 1361, 1590, 2507
Tru9I	TTAA	6 cut(s)	981, 1191, 1317, 1361, 1590, 2507
TscAI	CASTG	4 cut(s)	141, 744, 2125, 2539
TseFI	GTSAC	1 cut(s)	1311
Tsp45I	GTSAC	1 cut(s)	1311
TspGWI	ACGGA	2 cut(s)	2129, 2350
TspRI	CASTG	4 cut(s)	141, 744, 2125, 2539
Vha464I	CTTAAG	1 cut(s)	1316
VpaK11BI	GGWCC	1 cut(s)	240
XapI	RAATTY	9 cut(s)	57, 217, 1653, 1744, 1807, 2156, 2242, 2411, 2591
XceI	RCATGY	3 cut(s)	647, 1706, 2288
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	6 cut(s)	21, 833, 858, 1139, 1518, 2622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.