Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006901

Physical Location & Seq

Genomic Coordinates Forward (+)

563893 .. 569021

Gene Structure 5129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0005800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGTTACCTGTTTGCTCTGCCACCTCAAACTGCTGCTCCTCTCATTCTCAGGTTTTGTTAAATGGAGGTTTGCATCCAATTTCTCTGTTCCAGAAGGATTTCGAGGCCAGATATGTTGTGGATTATAGGGGCTTGTCAAATGCAATGCATTTCCAGAGAGACTCCGTCAAAGCACATGCTACAAATTCTTTCTACCCTAATGTTGTGACAAGCACAGAACAGTCGGTTCCCATGGATTTTGTTAACGGGAGTTCCTGCTCTAACAAATCAGACTATCTTAATTGCAAGTATTCAGATATGTGGAGTTCTTCTGGAGGAACTGGAGATAAACAGCATTCGTTGGGAAGGTTTGAACTGAAATATGTAGAAAGTTCTAGCCTATTGACCACCGATGAGGGACTCGAGGAGTTTACTGACCAGTCCACTGAGAATGCCGGTACTTTATTCAGACCAGTAGAACCGGAAACCATATCAGCTACTGATTTGACACAAGGAGATTCCACCTCTGTATCGGACACCCTAGACATGAATAATGATCAATTGTCCAGCGTGAAACCTAGTATTGAGGATCTTATTGATGGGGTTAGCAAGTCTTTCAGTGCTTCAGTAGATAAGGGAGAAAGTGCTGTGAAAAGCTCACTAGATACAATCACGTCGTCAATATCATCAGTTGTTGAAAGGGTTAATGAAGCAGTGGATAATGCTTTTAGCGGAATTTCTTCAACTGTTGATCAAACGGGACAATTAGGTGGAACTAAACTGACAAACTTTTCAAGTGACTTTAAGGAAGCCACAAGTAAAGGAAGTGTGATTGCTGTTGACCTTTTGAGACGCACAATTGTTGTGGTGGAGGATTCTCTAGCAAATGGGGTTTCCTTCACTGTTAATTCTTACCAATCTTCCAAGGCCTTTCTTCCTCCTGATATCAGTGATGCACTAAATTTGTCTGAAAAGAGAGCAGCAGAGTTTTTGGGGCCTGCCAACGCTGCTTTTCAACAGGTTTACATTGCTATCGAGGGGTTGGAGGAAAGTCTTGGCTTGGATCCAAATGATCCAATTATTCCATTTGTTCTATTCCTTGGCACCTCTGCCACTTTATGGGTCATTTATTCGGTGTGGACATACAGTGGTTATGCTGGAGATTTATCTCCTCAATCTACATTGGAGCTCTTGACAGGGAAGGAGAAGGCTGTACTCATTGATGTCCGACCCGAGGTTCTGAGAGAAAAAGAAGGTATTCCTGATCTAAGACGAGGAGCTCGCTATCGCTATGCAAGTGTGACTCTACCTGAGGTTGATGCCTCAGTAGCAAAGTTGTTGAAGAATGGAAGAGATCTTGATGACACCTTAACTGCTGCTGTTATTCGGAACTTGAAGATTGTCCAGGACAGGTCCAAGGTCATAATTATGGATGCTGATGGTACTCGTTCCAAAGCAATTGCAAGATCCTTGAGAAAGCTGGGGCTTAAGAGGCCTTACTTGCTTCAAGGTGGCTTTCGATCTTGGGTGAAAGATGGTCTTCGAATTAAAGAACTCAAACCTGAGACAACACTTTCCATACTCAATGAGGATGCTGAGGCTATTCTGGAGGAAATCAGTCCTACTCCGCTTCAAGTTCTTGGGTATGGTGTGGGTTTGATTGCAGGACTGTATGCACTACTAGAGTGGGAAAAGACATTACAACTGATTGGAGTTGTTGGCCTTGGTCAGACCATTTATCGGCGGGTGGCATCTTATGAGAACGCTGAAGATTTTAAGCAAGATGTGAGGCTGCTGCTTGTTCCGGCACAAGTTGGAGCTCAGGCATTTTCGTGGGCTGCTGGAAAATTGGAATCAAATGGCATCGGACTACCAACATCTCCTTCATCCTCAGATGTCAAAAACCGGGTGTTGCAGGCGGCTGCAAAGCATCAATCTCAACCGTCCGATACCGATGGCATCCAAGACTCATCTCCTGGATCAACAAATCCAGTCAATGAGAATGTAGATCTCTCTGAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 Pkinase

Protein Analysis

667

Amino Acids

72.04

Weight (kDa)

4.8

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhodanese	PF00581	389 - 504	5.1e-07	Rhodanese-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006901)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04540 FvH4_1g04540 FvH4_1g04540 FvH4_1g04540 FvH4_1g04540
malus_domestica	MD15G1183500.v1.1
prunus_persica	Prupe.7G232600_v2.0.a1 Prupe.7G232600_v2.0.a1 Prupe.7G232600_v2.0.a1 Prupe.7G232600_v2.0.a1
pyrus_communis	pycom15g16530
rosa_chinensis	RchiOBHm_Chr2g0090251
rosa_laevigata	RLG00000016091
rosa_multiflora	Rmu_co8459707.1_g000001 Rmu_sc0012828.1_g000001
rosa_roxburghii	Rroxscaffold_2G00151350
rosa_rugosa	Rorug02G0005700 Rorug02G0005800 Rorug02G0005900 Rorug02G0006000 Rorug02G0006000
rosa_samantha	Rh2AG051800 Rh2BG050400 Rh2CG052600 Rh2DG051700
rosa_wichuraiana	Rw2G004510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1082
AccB7I	CCANNNNNTGG	1 cut(s)	1098
AciI	CCGC	4 cut(s)	711, 1607, 1723, 1898
AclWI	GGATC	6 cut(s)	576, 1037, 1046, 1050, 1440, 1966
AcsI	RAATTY	3 cut(s)	184, 714, 940
AcuI	CTGAAG	2 cut(s)	588, 1767
AfaI	GTAC	3 cut(s)	439, 1194, 1423
AfiI	CCNNNNNNNGG	3 cut(s)	1098, 1213, 1719
AflII	CTTAAG	1 cut(s)	1466
AgsI	TTSAA	9 cut(s)	353, 677, 723, 774, 995, 1321, 1375, 1487, 1613
AjiI	CACGTC	1 cut(s)	654
AjnI	CCWGG	2 cut(s)	1383, 1954
AjuI	GAANNNNNNNTTGG	2 cut(s)	1846, 1878
AluBI	AGCT	6 cut(s)	476, 636, 1168, 1259, 1459, 1799
AluI	AGCT	6 cut(s)	476, 636, 1168, 1259, 1459, 1799
Alw21I	GWGCWC	3 cut(s)	1170, 1261, 1801
Alw26I	GTCTC	3 cut(s)	153, 823, 1538
AlwI	GGATC	6 cut(s)	576, 1037, 1046, 1050, 1440, 1966
AlwNI	CAGNNNCTG	1 cut(s)	479
Ama87I	CYCGRG	2 cut(s)	401, 1211
AoxI	GGCC	5 cut(s)	105, 906, 974, 1472, 1699
ApeKI	GCWGC	8 cut(s)	33, 959, 986, 1355, 1771, 1774, 1817, 1901
ApoI	RAATTY	3 cut(s)	184, 714, 940
Asp700I	GAANNNNTTC	3 cut(s)	98, 718, 1236
AspS9I	GGNCC	2 cut(s)	974, 1392
AsuC2I	CCSGG	1 cut(s)	1886
AsuHPI	GGTGA	1 cut(s)	1519
AsuII	TTCGAA	1 cut(s)	1522
AvaI	CYCGRG	2 cut(s)	401, 1211
AvaII	GGWCC	1 cut(s)	1392
AxyI	CCTNAGG	1 cut(s)	1290
BaeI	ACNNNNGTAYC	2 cut(s)	492, 525
BamHI	GGATCC	1 cut(s)	1042
BanI	GGYRCC	1 cut(s)	1082
BanII	GRGCYC	3 cut(s)	1170, 1261, 1801
BbsI	GAAGAC	1 cut(s)	1511
Bbv12I	GWGCWC	3 cut(s)	1170, 1261, 1801
BbvCI	CCTCAGC	1 cut(s)	1575
BbvI	GCAGC	8 cut(s)	20, 971, 973, 1342, 1758, 1761, 1804, 1888
BccI	CCATC	4 cut(s)	572, 1412, 1508, 1928
BciT130I	CCWGG	2 cut(s)	1385, 1956
BclI	TGATCA	2 cut(s)	535, 730
BcnI	CCSGG	1 cut(s)	1886
BcoDI	GTCTC	3 cut(s)	153, 823, 1538
BfaI	CTAG	6 cut(s)	375, 521, 558, 641, 860, 1661
BfrI	CTTAAG	1 cut(s)	1466
BglII	AGATCT	2 cut(s)	1333, 1987
BisI	GCNGC	9 cut(s)	34, 960, 987, 1356, 1772, 1775, 1818, 1899, 1902
BlsI	GCNGC	9 cut(s)	35, 961, 988, 1357, 1773, 1776, 1819, 1900, 1903
Bme1390I	CCNGG	3 cut(s)	1385, 1886, 1956
Bme18I	GGWCC	1 cut(s)	1392
BmeT110I	CYCGRG	2 cut(s)	401, 1211
BmgBI	CACGTC	1 cut(s)	654
BmgT120I	GGNCC	2 cut(s)	974, 1392
BmiI	GGNNCC	4 cut(s)	228, 975, 1044, 1084
BmrFI	CCNGG	3 cut(s)	1385, 1886, 1956
BmsI	GCATC	9 cut(s)	82, 922, 1288, 1402, 1561, 1739, 1851, 1918, 1947
BpiI	GAAGAC	1 cut(s)	1511
BpmI	CTGGAG	4 cut(s)	333, 342, 1158, 1607
Bpu10I	CCTNAGC	2 cut(s)	1575, 1800
Bpu14I	TTCGAA	1 cut(s)	1522
BpuEI	CTTGAG	1 cut(s)	1471
BpuMI	CCSGG	1 cut(s)	1886
BsaJI	CCNNGG	6 cut(s)	231, 903, 1078, 1212, 1395, 1702
BsaWI	WCCGGW	1 cut(s)	460
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	3 cut(s)	1098, 1213, 1719
Bse118I	RCCGGY	1 cut(s)	434
Bse1I	ACTGG	4 cut(s)	325, 418, 452, 1970
Bse21I	CCTNAGG	1 cut(s)	1290
Bse3DI	GCAATG	2 cut(s)	150, 1005
BseBI	CCWGG	2 cut(s)	1385, 1956
BseDI	CCNNGG	6 cut(s)	231, 903, 1078, 1212, 1395, 1702
BseGI	GGATG	5 cut(s)	73, 1417, 1576, 1865, 1938
BseLI	CCNNNNNNNGG	3 cut(s)	1098, 1213, 1719
BseMI	GCAATG	2 cut(s)	150, 1005
BseMII	CTCAG	9 cut(s)	62, 417, 1211, 1281, 1317, 1533, 1566, 1814, 1884
BseNI	ACTGG	4 cut(s)	325, 418, 452, 1970
BseRI	GAGGAG	4 cut(s)	28, 419, 1140, 1269
BseXI	GCAGC	8 cut(s)	20, 971, 973, 1342, 1758, 1761, 1804, 1888
BseYI	CCCAGC	1 cut(s)	1459
BshFI	GGCC	5 cut(s)	107, 908, 976, 1474, 1701
BshNI	GGYRCC	1 cut(s)	1082
BsiHKAI	GWGCWC	3 cut(s)	1170, 1261, 1801
BsiHKCI	CYCGRG	2 cut(s)	401, 1211
BsiSI	CCGG	4 cut(s)	435, 461, 1784, 1885
BslFI	GGGAC	2 cut(s)	411, 753
BslI	CCNNNNNNNGG	3 cut(s)	1098, 1213, 1719
BsmAI	GTCTC	3 cut(s)	153, 823, 1538
BsmBI	CGTCTC	1 cut(s)	823
BsmFI	GGGAC	2 cut(s)	411, 753
BsmI	GAATGC	2 cut(s)	334, 436
BsnI	GGCC	5 cut(s)	107, 908, 976, 1474, 1701
BsoBI	CYCGRG	2 cut(s)	401, 1211
Bsp119I	TTCGAA	1 cut(s)	1522
Bsp1286I	GDGCHC	3 cut(s)	1170, 1261, 1801
Bsp19I	CCATGG	1 cut(s)	231
BspACI	CCGC	4 cut(s)	711, 1607, 1723, 1898
BspANI	GGCC	5 cut(s)	107, 908, 976, 1474, 1701
BspCNI	CTCAG	9 cut(s)	61, 418, 1212, 1282, 1316, 1534, 1567, 1813, 1883
BspLI	GGNNCC	4 cut(s)	228, 975, 1044, 1084
BspPI	GGATC	6 cut(s)	576, 1037, 1046, 1050, 1440, 1966
BspT104I	TTCGAA	1 cut(s)	1522
BspT107I	GGYRCC	1 cut(s)	1082
BspTI	CTTAAG	1 cut(s)	1466
BsrDI	GCAATG	2 cut(s)	150, 1005
BsrFI	RCCGGY	1 cut(s)	434
BsrI	ACTGG	4 cut(s)	325, 418, 452, 1970
BssAI	RCCGGY	1 cut(s)	434
BssECI	CCNNGG	6 cut(s)	231, 903, 1078, 1212, 1395, 1702
BssT1I	CCWWGG	5 cut(s)	231, 903, 1078, 1395, 1702
Bst2UI	CCWGG	2 cut(s)	1385, 1956
Bst4CI	ACNGT	6 cut(s)	222, 727, 883, 1127, 1650, 1923
Bst6I	CTCTTC	1 cut(s)	1324
BstAFI	CTTAAG	1 cut(s)	1466
BstBI	TTCGAA	1 cut(s)	1522
BstC8I	GCNNGC	3 cut(s)	978, 1261, 1896
BstDSI	CCRYGG	1 cut(s)	231
BstF5I	GGATG	5 cut(s)	73, 1417, 1576, 1865, 1938
BstMAI	GTCTC	3 cut(s)	153, 823, 1538
BstMWI	GCNNNNNNNGC	4 cut(s)	986, 1307, 1471, 1480
BstNI	CCWGG	2 cut(s)	1385, 1956
BstNSI	RCATGY	1 cut(s)	179
BstSCI	CCNGG	3 cut(s)	1383, 1884, 1954
BstV1I	GCAGC	8 cut(s)	20, 971, 973, 1342, 1758, 1761, 1804, 1888
BstV2I	GAAGAC	1 cut(s)	1511
BstX2I	RGATCY	5 cut(s)	568, 1042, 1333, 1445, 1987
BstYI	RGATCY	5 cut(s)	568, 1042, 1333, 1445, 1987
Bsu36I	CCTNAGG	1 cut(s)	1290
BsuRI	GGCC	5 cut(s)	107, 908, 976, 1474, 1701
BtgI	CCRYGG	1 cut(s)	231
BtrI	CACGTC	1 cut(s)	654
BtsCI	GGATG	5 cut(s)	73, 1417, 1576, 1865, 1938
BtsI	GCAGTG	1 cut(s)	699
BtsIMutI	CAGTG	6 cut(s)	423, 604, 699, 879, 934, 1132
Cac8I	GCNNGC	3 cut(s)	978, 1261, 1896
CaiI	CAGNNNCTG	1 cut(s)	479
Cfr10I	RCCGGY	1 cut(s)	434
Cfr13I	GGNCC	2 cut(s)	974, 1392
CseI	GACGC	1 cut(s)	840
Csp6I	GTAC	3 cut(s)	438, 1193, 1422
CspCI	CAANNNNNGTGG	2 cut(s)	825, 860
CviAII	CATG	3 cut(s)	176, 232, 526
CviQI	GTAC	3 cut(s)	438, 1193, 1422
Eam1104I	CTCTTC	1 cut(s)	1324
EarI	CTCTTC	1 cut(s)	1324
Ecl136II	GAGCTC	3 cut(s)	1168, 1259, 1799
Eco130I	CCWWGG	5 cut(s)	231, 903, 1078, 1395, 1702
Eco147I	AGGCCT	2 cut(s)	908, 1474
Eco24I	GRGCYC	3 cut(s)	1170, 1261, 1801
Eco32I	GATATC	1 cut(s)	925
Eco47I	GGWCC	1 cut(s)	1392
Eco53kI	GAGCTC	3 cut(s)	1168, 1259, 1799
Eco57I	CTGAAG	2 cut(s)	588, 1767
Eco81I	CCTNAGG	1 cut(s)	1290
Eco88I	CYCGRG	2 cut(s)	401, 1211
EcoICRI	GAGCTC	3 cut(s)	1168, 1259, 1799
EcoO109I	RGGNCCY	1 cut(s)	974
EcoRII	CCWGG	2 cut(s)	1383, 1954
EcoRV	GATATC	1 cut(s)	925
EcoT14I	CCWWGG	5 cut(s)	231, 903, 1078, 1395, 1702
EcoT22I	ATGCAT	1 cut(s)	150
EcoT38I	GRGCYC	3 cut(s)	1170, 1261, 1801
ErhI	CCWWGG	5 cut(s)	231, 903, 1078, 1395, 1702
Esp3I	CGTCTC	1 cut(s)	823
FaeI	CATG	3 cut(s)	179, 235, 529
FalI	AAGNNNNNCTT	2 cut(s)	1503, 1535
FaqI	GGGAC	2 cut(s)	411, 753
FatI	CATG	3 cut(s)	175, 231, 525
FauI	CCCGC	1 cut(s)	1716
FbaI	TGATCA	2 cut(s)	535, 730
Fnu4HI	GCNGC	9 cut(s)	34, 960, 987, 1356, 1772, 1775, 1818, 1899, 1902
FokI	GGATG	5 cut(s)	60, 1424, 1583, 1852, 1925
FriOI	GRGCYC	3 cut(s)	1170, 1261, 1801
Fsp4HI	GCNGC	9 cut(s)	34, 960, 987, 1356, 1772, 1775, 1818, 1899, 1902
FspBI	CTAG	6 cut(s)	375, 521, 558, 641, 860, 1661
GluI	GCNGC	9 cut(s)	34, 960, 987, 1356, 1772, 1775, 1818, 1899, 1902
GsaI	CCCAGC	1 cut(s)	1463
GsuI	CTGGAG	4 cut(s)	333, 342, 1158, 1607
HaeIII	GGCC	5 cut(s)	107, 908, 976, 1474, 1701
HapII	CCGG	4 cut(s)	435, 461, 1784, 1885
HgaI	GACGC	1 cut(s)	840
Hin1II	CATG	3 cut(s)	179, 235, 529
HincII	GTYRAC	2 cut(s)	244, 820
HindII	GTYRAC	2 cut(s)	244, 820
HinfI	GANTC	7 cut(s)	161, 399, 497, 854, 1282, 1832, 1946
HpaI	GTTAAC	1 cut(s)	244
HpaII	CCGG	4 cut(s)	435, 461, 1784, 1885
HphI	GGTGA	1 cut(s)	1519
Hpy166II	GTNNAC	6 cut(s)	244, 411, 423, 820, 1003, 1119
Hpy188III	TCNNGA	8 cut(s)	91, 154, 312, 920, 1171, 1241, 1337, 1586
Hpy8I	GTNNAC	6 cut(s)	244, 411, 423, 820, 1003, 1119
Hpy99I	CGWCG	1 cut(s)	658
HpyAV	CCTTC	7 cut(s)	88, 339, 886, 1174, 1180, 1226, 1872
HpyCH4III	ACNGT	6 cut(s)	222, 727, 883, 1127, 1650, 1923
HpyCH4IV	ACGT	1 cut(s)	653
HpyF10VI	GCNNNNNNNGC	4 cut(s)	986, 1307, 1471, 1480
HpySE526I	ACGT	1 cut(s)	653
Hsp92II	CATG	3 cut(s)	179, 235, 529
Ksp22I	TGATCA	2 cut(s)	535, 730
KspAI	GTTAAC	1 cut(s)	244
LmnI	GCTCC	4 cut(s)	41, 1165, 1256, 1796
Lsp1109I	GCAGC	8 cut(s)	20, 971, 973, 1342, 1758, 1761, 1804, 1888
LweI	GCATC	9 cut(s)	82, 922, 1288, 1402, 1561, 1739, 1851, 1918, 1947
MaeI	CTAG	6 cut(s)	375, 521, 558, 641, 860, 1661
MaeII	ACGT	1 cut(s)	653
MaeIII	GTNAC	4 cut(s)	3, 205, 776, 1279
MboII	GAAGA	9 cut(s)	300, 711, 891, 905, 1333, 1341, 1387, 1511, 1760
MfeI	CAATTG	3 cut(s)	539, 837, 1437
MflI	RGATCY	5 cut(s)	568, 1042, 1333, 1445, 1987
MhlI	GDGCHC	3 cut(s)	1170, 1261, 1801
MlyI	GAGTC	4 cut(s)	155, 393, 1276, 1940
MmeI	TCCRAC	3 cut(s)	1002, 1231, 1774
Mph1103I	ATGCAT	1 cut(s)	150
MroXI	GAANNNNTTC	3 cut(s)	98, 718, 1236
MslI	CAYNNNNRTG	2 cut(s)	1406, 1810
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	4 cut(s)	435, 461, 1784, 1885
MspR9I	CCNGG	3 cut(s)	1385, 1886, 1956
MunI	CAATTG	3 cut(s)	539, 837, 1437
Mva1269I	GAATGC	2 cut(s)	334, 436
MvaI	CCWGG	2 cut(s)	1385, 1956
MwoI	GCNNNNNNNGC	4 cut(s)	986, 1307, 1471, 1480
NciI	CCSGG	1 cut(s)	1886
NcoI	CCATGG	1 cut(s)	231
NlaIII	CATG	3 cut(s)	179, 235, 529
NlaIV	GGNNCC	4 cut(s)	228, 975, 1044, 1084
NmuCI	GTSAC	3 cut(s)	205, 776, 1279
NsiI	ATGCAT	1 cut(s)	150
NspI	RCATGY	1 cut(s)	179
NspV	TTCGAA	1 cut(s)	1522
PaeR7I	CTCGAG	1 cut(s)	401
PceI	AGGCCT	2 cut(s)	908, 1474
PctI	GAATGC	2 cut(s)	334, 436
PdmI	GAANNNNTTC	3 cut(s)	98, 718, 1236
PfeI	GAWTC	3 cut(s)	497, 854, 1832
PflFI	GACNNNGTC	1 cut(s)	164
PflMI	CCANNNNNTGG	1 cut(s)	1098
PfoI	TCCNGGA	2 cut(s)	1383, 1954
PkrI	GCNGC	9 cut(s)	35, 961, 988, 1357, 1773, 1776, 1819, 1900, 1903
PleI	GAGTC	4 cut(s)	155, 393, 1276, 1940
PpsI	GAGTC	4 cut(s)	155, 393, 1276, 1940
Psp124BI	GAGCTC	3 cut(s)	1170, 1261, 1801
Psp6I	CCWGG	2 cut(s)	1383, 1954
PspFI	CCCAGC	1 cut(s)	1459
PspGI	CCWGG	2 cut(s)	1383, 1954
PspN4I	GGNNCC	4 cut(s)	228, 975, 1044, 1084
PspPI	GGNCC	2 cut(s)	974, 1392
PspXI	VCTCGAGB	1 cut(s)	401
PstNI	CAGNNNCTG	1 cut(s)	479
PsuI	RGATCY	5 cut(s)	568, 1042, 1333, 1445, 1987
PsyI	GACNNNGTC	1 cut(s)	164
RsaI	GTAC	3 cut(s)	439, 1194, 1423
RsaNI	GTAC	3 cut(s)	438, 1193, 1422
RseI	CAYNNNNRTG	2 cut(s)	1406, 1810
SacI	GAGCTC	3 cut(s)	1170, 1261, 1801
SatI	GCNGC	9 cut(s)	34, 960, 987, 1356, 1772, 1775, 1818, 1899, 1902
Sau96I	GGNCC	2 cut(s)	974, 1392
SchI	GAGTC	4 cut(s)	155, 393, 1276, 1940
ScrFI	CCNGG	3 cut(s)	1385, 1886, 1956
SduI	GDGCHC	3 cut(s)	1170, 1261, 1801
SfaNI	GCATC	9 cut(s)	82, 922, 1288, 1402, 1561, 1739, 1851, 1918, 1947
Sfr274I	CTCGAG	1 cut(s)	401
SfuI	TTCGAA	1 cut(s)	1522
SinI	GGWCC	1 cut(s)	1392
SlaI	CTCGAG	1 cut(s)	401
SmiMI	CAYNNNNRTG	2 cut(s)	1406, 1810
SmlI	CTYRAG	3 cut(s)	401, 1450, 1466
SmoI	CTYRAG	3 cut(s)	401, 1450, 1466
SseBI	AGGCCT	2 cut(s)	908, 1474
SsiI	CCGC	4 cut(s)	711, 1607, 1723, 1898
SspMI	CTAG	6 cut(s)	375, 521, 558, 641, 860, 1661
SstI	GAGCTC	3 cut(s)	1170, 1261, 1801
StuI	AGGCCT	2 cut(s)	908, 1474
StyD4I	CCNGG	3 cut(s)	1383, 1884, 1954
StyI	CCWWGG	5 cut(s)	231, 903, 1078, 1395, 1702
TaaI	ACNGT	6 cut(s)	222, 727, 883, 1127, 1650, 1923
TaiI	ACGT	1 cut(s)	656
TaqI	TCGA	5 cut(s)	102, 402, 1014, 1498, 1522
TatI	WGTACW	1 cut(s)	1192
TauI	GCSGC	1 cut(s)	1901
TfiI	GAWTC	3 cut(s)	497, 854, 1832
TscAI	CASTG	6 cut(s)	430, 604, 699, 886, 934, 1132
TseFI	GTSAC	3 cut(s)	205, 776, 1279
TseI	GCWGC	8 cut(s)	33, 959, 986, 1355, 1771, 1774, 1817, 1901
Tsp45I	GTSAC	3 cut(s)	205, 776, 1279
TspDTI	ATGAA	3 cut(s)	542, 702, 1854
TspGWI	ACGGA	1 cut(s)	154
TspRI	CASTG	6 cut(s)	430, 604, 699, 886, 934, 1132
Tth111I	GACNNNGTC	1 cut(s)	164
Van91I	CCANNNNNTGG	1 cut(s)	1098
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	1 cut(s)	1392
XapI	RAATTY	3 cut(s)	184, 714, 940
XceI	RCATGY	1 cut(s)	179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	115
XhoI	CTCGAG	1 cut(s)	401
XmnI	GAANNNNTTC	3 cut(s)	98, 718, 1236
XspI	CTAG	6 cut(s)	375, 521, 558, 641, 860, 1661
Zsp2I	ATGCAT	1 cut(s)	150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.