Belongs to the universal ribosomal protein uL11 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G35490 AT4G35490 |
| fragaria_vesca | FvH4_1g10230 FvH4_1g10230 FvH4_4g16570 |
| malus_domestica | MD02G1114300.v1.1 MD07G1093800.v1.1 MD15G1229900.v1.1 |
| prunus_persica | Prupe.8G126100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0097051 |
| rosa_laevigata | RLG00000016698 |
| rosa_multiflora | Rmu_co8331479.1_g000001 Rmu_sc0006626.1_g000009 Rmu_ssc0000008.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00145020 |
| rosa_rugosa | Rorug02G0063200 |
| rosa_samantha | Rh2AG110800 Rh2BG112700 Rh2CG114900 Rh2DG114100 Rh4AG013400 |
| rosa_wichuraiana | Rw2G008610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 164 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 524 |
| AccBSI | CCGCTC | 1 cut(s) | 488 |
| AclI | AACGTT | 1 cut(s) | 84 |
| AclWI | GGATC | 3 cut(s) | 203, 698, 811 |
| AcyI | GRCGYC | 1 cut(s) | 165 |
| AfaI | GTAC | 4 cut(s) | 764, 840, 1315, 1467 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 218, 524, 826, 840, 971, 1226, 1480 |
| AflII | CTTAAG | 1 cut(s) | 245 |
| AgsI | TTSAA | 5 cut(s) | 148, 757, 914, 1091, 1257 |
| AjnI | CCWGG | 3 cut(s) | 31, 833, 1225 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 954, 986 |
| Alw21I | GWGCWC | 1 cut(s) | 1150 |
| Alw26I | GTCTC | 1 cut(s) | 504 |
| AlwI | GGATC | 3 cut(s) | 203, 698, 811 |
| AoxI | GGCC | 3 cut(s) | 389, 408, 804 |
| ApeKI | GCWGC | 9 cut(s) | 105, 116, 557, 844, 943, 1025, 1068, 1240, 1470 |
| AseI | ATTAAT | 1 cut(s) | 1340 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1168, 1191, 1278 |
| AspLEI | GCGC | 1 cut(s) | 167 |
| AspS9I | GGNCC | 3 cut(s) | 408, 805, 1658 |
| AsuC2I | CCSGG | 1 cut(s) | 348 |
| AsuHPI | GGTGA | 2 cut(s) | 355, 916 |
| AvaII | GGWCC | 1 cut(s) | 1658 |
| BaeGI | GKGCMC | 1 cut(s) | 257 |
| BanI | GGYRCC | 1 cut(s) | 164 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1567, 1599 |
| BauI | CACGAG | 1 cut(s) | 1095 |
| BbsI | GAAGAC | 1 cut(s) | 1007 |
| Bbv12I | GWGCWC | 1 cut(s) | 1150 |
| BbvI | GCAGC | 9 cut(s) | 117, 128, 569, 831, 955, 1037, 1080, 1252, 1482 |
| BccI | CCATC | 2 cut(s) | 220, 456 |
| BceAI | ACGGC | 4 cut(s) | 410, 857, 1634, 1641 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 536, 570 |
| BciT130I | CCWGG | 3 cut(s) | 33, 835, 1227 |
| BclI | TGATCA | 1 cut(s) | 1330 |
| BcnI | CCSGG | 1 cut(s) | 348 |
| BcoDI | GTCTC | 1 cut(s) | 504 |
| BfaI | CTAG | 3 cut(s) | 179, 809, 1443 |
| BfmI | CTRYAG | 3 cut(s) | 573, 628, 873 |
| BfoI | RGCGCY | 1 cut(s) | 168 |
| BfrI | CTTAAG | 1 cut(s) | 245 |
| BglII | AGATCT | 2 cut(s) | 520, 1117 |
| Bme1390I | CCNGG | 4 cut(s) | 33, 348, 835, 1227 |
| Bme18I | GGWCC | 1 cut(s) | 1658 |
| BmgT120I | GGNCC | 3 cut(s) | 408, 805, 1658 |
| BmiI | GGNNCC | 3 cut(s) | 166, 357, 1534 |
| BmrFI | CCNGG | 4 cut(s) | 33, 348, 835, 1227 |
| BmsI | GCATC | 2 cut(s) | 271, 1630 |
| BpiI | GAAGAC | 1 cut(s) | 1007 |
| BpmI | CTGGAG | 2 cut(s) | 582, 980 |
| BpuEI | CTTGAG | 1 cut(s) | 1172 |
| BpuMI | CCSGG | 1 cut(s) | 348 |
| Bsa29I | ATCGAT | 1 cut(s) | 1356 |
| BsaHI | GRCGYC | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 4 cut(s) | 285, 834, 1175, 1226 |
| BsaWI | WCCGGW | 1 cut(s) | 218 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 218, 524, 826, 840, 971, 1226, 1480 |
| Bse118I | RCCGGY | 1 cut(s) | 640 |
| Bse3DI | GCAATG | 2 cut(s) | 415, 1250 |
| BseBI | CCWGG | 3 cut(s) | 33, 835, 1227 |
| BseCI | ATCGAT | 1 cut(s) | 1356 |
| BseDI | CCNNGG | 4 cut(s) | 285, 834, 1175, 1226 |
| BseGI | GGATG | 5 cut(s) | 61, 157, 212, 286, 1186 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 218, 524, 826, 840, 971, 1226, 1480 |
| BseMI | GCAATG | 2 cut(s) | 415, 1250 |
| BseMII | CTCAG | 1 cut(s) | 1038 |
| BseSI | GKGCMC | 1 cut(s) | 257 |
| BseXI | GCAGC | 9 cut(s) | 117, 128, 569, 831, 955, 1037, 1080, 1252, 1482 |
| BsgI | GTGCAG | 1 cut(s) | 1259 |
| BshFI | GGCC | 3 cut(s) | 391, 410, 806 |
| BshNI | GGYRCC | 1 cut(s) | 164 |
| BshVI | ATCGAT | 1 cut(s) | 1356 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1150 |
| BsiSI | CCGG | 4 cut(s) | 219, 347, 641, 1661 |
| BslFI | GGGAC | 1 cut(s) | 638 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 218, 524, 826, 840, 971, 1226, 1480 |
| BsmAI | GTCTC | 1 cut(s) | 504 |
| BsmBI | CGTCTC | 1 cut(s) | 504 |
| BsmFI | GGGAC | 1 cut(s) | 638 |
| BsnI | GGCC | 3 cut(s) | 391, 410, 806 |
| Bsp1286I | GDGCHC | 2 cut(s) | 257, 1150 |
| Bsp143I | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| Bsp19I | CCATGG | 1 cut(s) | 1175 |
| BspANI | GGCC | 3 cut(s) | 391, 410, 806 |
| BspCNI | CTCAG | 1 cut(s) | 1039 |
| BspDI | ATCGAT | 1 cut(s) | 1356 |
| BspLI | GGNNCC | 3 cut(s) | 166, 357, 1534 |
| BspMAI | CTGCAG | 1 cut(s) | 577 |
| BspPI | GGATC | 3 cut(s) | 203, 698, 811 |
| BspT107I | GGYRCC | 1 cut(s) | 164 |
| BspTI | CTTAAG | 1 cut(s) | 245 |
| BsrBI | CCGCTC | 1 cut(s) | 488 |
| BsrDI | GCAATG | 2 cut(s) | 415, 1250 |
| BsrFI | RCCGGY | 1 cut(s) | 640 |
| BssAI | RCCGGY | 1 cut(s) | 640 |
| BssECI | CCNNGG | 4 cut(s) | 285, 834, 1175, 1226 |
| BssMI | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| BssNI | GRCGYC | 1 cut(s) | 165 |
| BssSI | CACGAG | 1 cut(s) | 1095 |
| BssT1I | CCWWGG | 2 cut(s) | 285, 1175 |
| Bst2BI | CACGAG | 1 cut(s) | 1095 |
| Bst2UI | CCWGG | 3 cut(s) | 33, 835, 1227 |
| Bst4CI | ACNGT | 3 cut(s) | 305, 619, 1549 |
| Bst6I | CTCTTC | 2 cut(s) | 1011, 1599 |
| BstACI | GRCGYC | 1 cut(s) | 165 |
| BstAFI | CTTAAG | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 2 cut(s) | 110, 114 |
| BstDEI | CTNAG | 1 cut(s) | 1047 |
| BstDSI | CCRYGG | 1 cut(s) | 1175 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 824, 1224 |
| BstF5I | GGATG | 5 cut(s) | 61, 157, 212, 286, 1186 |
| BstH2I | RGCGCY | 1 cut(s) | 168 |
| BstHHI | GCGC | 1 cut(s) | 167 |
| BstKTI | GATC | 7 cut(s) | 211, 523, 706, 819, 1120, 1333, 1542 |
| BstMAI | GTCTC | 1 cut(s) | 504 |
| BstMBI | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 171, 1640 |
| BstNI | CCWGG | 3 cut(s) | 33, 835, 1227 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSCI | CCNGG | 4 cut(s) | 31, 346, 833, 1225 |
| BstSFI | CTRYAG | 3 cut(s) | 573, 628, 873 |
| BstSLI | GKGCMC | 1 cut(s) | 257 |
| BstV1I | GCAGC | 9 cut(s) | 117, 128, 569, 831, 955, 1037, 1080, 1252, 1482 |
| BstV2I | GAAGAC | 1 cut(s) | 1007 |
| BstX2I | RGATCY | 3 cut(s) | 520, 703, 1117 |
| BstYI | RGATCY | 3 cut(s) | 520, 703, 1117 |
| Bsu15I | ATCGAT | 1 cut(s) | 1356 |
| BsuRI | GGCC | 3 cut(s) | 391, 410, 806 |
| BsuTUI | ATCGAT | 1 cut(s) | 1356 |
| BtgI | CCRYGG | 1 cut(s) | 1175 |
| BtgZI | GCGATG | 2 cut(s) | 434, 1425 |
| BtsCI | GGATG | 5 cut(s) | 61, 157, 212, 286, 1186 |
| BtsI | GCAGTG | 1 cut(s) | 582 |
| BtsIMutI | CAGTG | 5 cut(s) | 301, 582, 624, 1150, 1545 |
| Cac8I | GCNNGC | 2 cut(s) | 110, 114 |
| CfoI | GCGC | 1 cut(s) | 167 |
| Cfr10I | RCCGGY | 1 cut(s) | 640 |
| Cfr13I | GGNCC | 3 cut(s) | 408, 805, 1658 |
| ClaI | ATCGAT | 1 cut(s) | 1356 |
| Csp6I | GTAC | 4 cut(s) | 763, 839, 1314, 1466 |
| CviAII | CATG | 9 cut(s) | 113, 566, 720, 766, 848, 1065, 1176, 1294, 1537 |
| CviQI | GTAC | 4 cut(s) | 763, 839, 1314, 1466 |
| DdeI | CTNAG | 1 cut(s) | 1047 |
| DinI | GGCGCC | 1 cut(s) | 166 |
| DpnI | GATC | 7 cut(s) | 210, 522, 705, 818, 1119, 1332, 1541 |
| DpnII | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| DraI | TTTAAA | 1 cut(s) | 685 |
| Eam1104I | CTCTTC | 2 cut(s) | 1011, 1599 |
| EarI | CTCTTC | 2 cut(s) | 1011, 1599 |
| EciI | GGCGGA | 2 cut(s) | 522, 1649 |
| Eco130I | CCWWGG | 2 cut(s) | 285, 1175 |
| Eco32I | GATATC | 1 cut(s) | 1035 |
| Eco47I | GGWCC | 1 cut(s) | 1658 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 824, 1224 |
| EcoO109I | RGGNCCY | 1 cut(s) | 805 |
| EcoRII | CCWGG | 3 cut(s) | 31, 833, 1225 |
| EcoRV | GATATC | 1 cut(s) | 1035 |
| EcoT14I | CCWWGG | 2 cut(s) | 285, 1175 |
| EgeI | GGCGCC | 1 cut(s) | 166 |
| EheI | GGCGCC | 1 cut(s) | 166 |
| ErhI | CCWWGG | 2 cut(s) | 285, 1175 |
| Esp3I | CGTCTC | 1 cut(s) | 504 |
| FaeI | CATG | 9 cut(s) | 116, 569, 723, 769, 851, 1068, 1179, 1297, 1540 |
| FaqI | GGGAC | 1 cut(s) | 638 |
| FatI | CATG | 9 cut(s) | 112, 565, 719, 765, 847, 1064, 1175, 1293, 1536 |
| FauNDI | CATATG | 2 cut(s) | 126, 136 |
| FbaI | TGATCA | 1 cut(s) | 1330 |
| FokI | GGATG | 5 cut(s) | 68, 164, 199, 293, 1193 |
| FspBI | CTAG | 3 cut(s) | 179, 809, 1443 |
| GlaI | GCGC | 1 cut(s) | 166 |
| GsuI | CTGGAG | 2 cut(s) | 582, 980 |
| HaeII | RGCGCY | 1 cut(s) | 168 |
| HaeIII | GGCC | 3 cut(s) | 391, 410, 806 |
| HapII | CCGG | 4 cut(s) | 219, 347, 641, 1661 |
| HhaI | GCGC | 1 cut(s) | 167 |
| Hin1I | GRCGYC | 1 cut(s) | 165 |
| Hin1II | CATG | 9 cut(s) | 116, 569, 723, 769, 851, 1068, 1179, 1297, 1540 |
| Hin6I | GCGC | 1 cut(s) | 165 |
| HinP1I | GCGC | 1 cut(s) | 165 |
| HindIII | AAGCTT | 1 cut(s) | 384 |
| HinfI | GANTC | 7 cut(s) | 569, 595, 647, 812, 1003, 1164, 1279 |
| HpaII | CCGG | 4 cut(s) | 219, 347, 641, 1661 |
| HphI | GGTGA | 2 cut(s) | 355, 916 |
| Hpy188I | TCNGA | 4 cut(s) | 194, 232, 859, 1122 |
| HpyAV | CCTTC | 5 cut(s) | 142, 155, 721, 751, 1593 |
| HpyCH4III | ACNGT | 3 cut(s) | 305, 619, 1549 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 8 cut(s) | 116, 420, 557, 575, 847, 1068, 1106, 1240 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 171, 1640 |
| HpyF3I | CTNAG | 1 cut(s) | 1047 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92I | GRCGYC | 1 cut(s) | 165 |
| Hsp92II | CATG | 9 cut(s) | 116, 569, 723, 769, 851, 1068, 1179, 1297, 1540 |
| HspAI | GCGC | 1 cut(s) | 165 |
| KasI | GGCGCC | 1 cut(s) | 164 |
| Ksp22I | TGATCA | 1 cut(s) | 1330 |
| Kzo9I | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| LmnI | GCTCC | 3 cut(s) | 355, 1265, 1519 |
| Lsp1109I | GCAGC | 9 cut(s) | 117, 128, 569, 831, 955, 1037, 1080, 1252, 1482 |
| LweI | GCATC | 2 cut(s) | 271, 1630 |
| MaeI | CTAG | 3 cut(s) | 179, 809, 1443 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MaeIII | GTNAC | 4 cut(s) | 305, 427, 463, 1053 |
| MalI | GATC | 7 cut(s) | 210, 522, 705, 818, 1119, 1332, 1541 |
| MbiI | CCGCTC | 1 cut(s) | 488 |
| MboI | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| MfeI | CAATTG | 1 cut(s) | 1086 |
| MflI | RGATCY | 3 cut(s) | 520, 703, 1117 |
| MhlI | GDGCHC | 2 cut(s) | 257, 1150 |
| MluCI | AATT | 9 cut(s) | 45, 155, 402, 433, 535, 798, 1086, 1203, 1274 |
| Mly113I | GGCGCC | 1 cut(s) | 165 |
| MlyI | GAGTC | 4 cut(s) | 578, 589, 821, 997 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1168, 1191, 1278 |
| MspA1I | CMGCKG | 4 cut(s) | 174, 368, 602, 1071 |
| MspCI | CTTAAG | 1 cut(s) | 245 |
| MspI | CCGG | 4 cut(s) | 219, 347, 641, 1661 |
| MspR9I | CCNGG | 4 cut(s) | 33, 348, 835, 1227 |
| MunI | CAATTG | 1 cut(s) | 1086 |
| MvaI | CCWGG | 3 cut(s) | 33, 835, 1227 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 171, 1640 |
| NarI | GGCGCC | 1 cut(s) | 165 |
| NciI | CCSGG | 1 cut(s) | 348 |
| NcoI | CCATGG | 1 cut(s) | 1175 |
| NdeI | CATATG | 2 cut(s) | 126, 136 |
| NdeII | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| NlaIII | CATG | 9 cut(s) | 116, 569, 723, 769, 851, 1068, 1179, 1297, 1540 |
| NlaIV | GGNNCC | 3 cut(s) | 166, 357, 1534 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PaeI | GCATGC | 1 cut(s) | 116 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1168, 1191, 1278 |
| PfeI | GAWTC | 3 cut(s) | 647, 1164, 1279 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 524 |
| PfoI | TCCNGGA | 1 cut(s) | 346 |
| PleI | GAGTC | 4 cut(s) | 577, 589, 820, 997 |
| PluTI | GGCGCC | 1 cut(s) | 168 |
| PpsI | GAGTC | 4 cut(s) | 577, 589, 820, 997 |
| PshBI | ATTAAT | 1 cut(s) | 1340 |
| Psp1406I | AACGTT | 1 cut(s) | 84 |
| Psp6I | CCWGG | 3 cut(s) | 31, 833, 1225 |
| PspGI | CCWGG | 3 cut(s) | 31, 833, 1225 |
| PspN4I | GGNNCC | 3 cut(s) | 166, 357, 1534 |
| PspPI | GGNCC | 3 cut(s) | 408, 805, 1658 |
| PstI | CTGCAG | 1 cut(s) | 577 |
| PsuI | RGATCY | 3 cut(s) | 520, 703, 1117 |
| PvuII | CAGCTG | 2 cut(s) | 602, 1071 |
| RsaI | GTAC | 4 cut(s) | 764, 840, 1315, 1467 |
| RsaNI | GTAC | 4 cut(s) | 763, 839, 1314, 1466 |
| Sau3AI | GATC | 7 cut(s) | 208, 520, 703, 816, 1117, 1330, 1539 |
| Sau96I | GGNCC | 3 cut(s) | 408, 805, 1658 |
| SchI | GAGTC | 4 cut(s) | 578, 589, 821, 997 |
| ScrFI | CCNGG | 4 cut(s) | 33, 348, 835, 1227 |
| SduI | GDGCHC | 2 cut(s) | 257, 1150 |
| SfaNI | GCATC | 2 cut(s) | 271, 1630 |
| SfcI | CTRYAG | 3 cut(s) | 573, 628, 873 |
| SfoI | GGCGCC | 1 cut(s) | 166 |
| SinI | GGWCC | 1 cut(s) | 1658 |
| SmlI | CTYRAG | 2 cut(s) | 245, 1151 |
| SmoI | CTYRAG | 2 cut(s) | 245, 1151 |
| SphI | GCATGC | 1 cut(s) | 116 |
| Sse9I | AATT | 9 cut(s) | 45, 155, 402, 433, 535, 798, 1086, 1203, 1274 |
| SspDI | GGCGCC | 1 cut(s) | 164 |
| SspI | AATATT | 3 cut(s) | 1234, 1253, 1261 |
| SspMI | CTAG | 3 cut(s) | 179, 809, 1443 |
| StyD4I | CCNGG | 4 cut(s) | 31, 346, 833, 1225 |
| StyI | CCWWGG | 2 cut(s) | 285, 1175 |
| TaaI | ACNGT | 3 cut(s) | 305, 619, 1549 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TaqI | TCGA | 3 cut(s) | 815, 880, 1356 |
| TasI | AATT | 9 cut(s) | 45, 155, 402, 433, 535, 798, 1086, 1203, 1274 |
| TatI | WGTACW | 1 cut(s) | 1313 |
| TauI | GCSGC | 3 cut(s) | 413, 1646, 1649 |
| TfiI | GAWTC | 3 cut(s) | 647, 1164, 1279 |
| TscAI | CASTG | 5 cut(s) | 308, 582, 624, 1150, 1552 |
| TseI | GCWGC | 9 cut(s) | 105, 116, 557, 844, 943, 1025, 1068, 1240, 1470 |
| TspDTI | ATGAA | 7 cut(s) | 168, 339, 626, 703, 765, 975, 1197 |
| TspGWI | ACGGA | 1 cut(s) | 944 |
| TspRI | CASTG | 5 cut(s) | 308, 582, 624, 1150, 1552 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 524 |
| Vha464I | CTTAAG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 1 cut(s) | 1658 |
| VspI | ATTAAT | 1 cut(s) | 1340 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 824, 1224 |
| XbaI | TCTAGA | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1168, 1191, 1278 |
| XspI | CTAG | 3 cut(s) | 179, 809, 1443 |