Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0014480

Physical Location & Seq

Genomic Coordinates Forward (+)

6195603 .. 6207010

Gene Structure 11408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0077200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTGGAACTCTAACATGTTAAGGGCCAAGGCCAACATGTTCTTCCTACTGTTTCTGGTTTCATGGCTCTCTTCTGCTTTAGCCTCTGTGGGTTATGACCACAGGGCTGTTATAGTCAATGGAAAGAGAAGGATTCTCCTTTCTGGGTCTATTCACTACCCCAGAAGCACACCTGAGATGTGGCCGGATTTGCTTCAGAAGGCCAAAGATGGAGGCTTGGATGTGATACAGACCTATGTCTTCTGGAATGGGCACGAACCCAGCCCAGGAAAATATTATTTTGAGGATAGATATGATCTGGTCAAGTTCATCAAGCTGGCTCAACAACATGGCCTATATGTTCATCTCCGGATTGGCCCTTATATTTGTGCTGAATGGAACTTTGGAGGATTCCCTGTTTGGCTGAAATATGTTCCCGGAATGGTTTTCAGAACAGACAATCGTCCTTTCATGGCAGCAATGGAAAAATTTACACAGAAGATTGTGTATATGATGAAGGCAGAAAGGTTGTTCCAAACTCAGGGAGGTCCTATAATTCTGTCTCAGATTGAAAATGAATTTGGACCGGTAGAGTGGGAAATTGGTGCACCTGGTAAATCTTATACTCAATGGGCAGCTAAAATGGCTGTGGGTCTCAACACTGGGGTTCCATGGGTTATGTGCAAGCAAGAAGACGCCCCTGACCCAATTATCGATACTTGCAATGGCTTCTACTGTGAAAACTTCACTCCAAACAAGAACTATAAGCCCAAAATGTGGACAGAAATCTGGACTGGCTGGTATACAGAATTTGGCGGGGCAGTTCCTACTAGACCTGCACAAGATTTGGCATTTTCAGTTGCAAGGTTTATACAAAATGGTGGCTCTTTTGCTAACTATTACATGTATCATGGAGGAACTAATTTTGACCGAACTTCTGGCCTTTTCGTTGCAACTAGCTATGACTATGATGCACCTCTAGATGAATATGGACTACCAAGGGAACCAAAGTGGAGTCATCTGAAATATTTGCACAAAGCCATCAAATTAGCTGAGGCAGCTTTAGTGGCTACTGATCCTGCAGTGACATCACTTGGAAAGAGTCAAGAGGCTCATGTATTCAATTCAAGTTCTGGGTGTGCTGCATTTCTTGCAAATTACGACACAAAATACTCGTCAAGAGTGAGCTTTGGGAATAGGCAATATAAGCTGCCACCCTGGTCTATAAGCATTCTTCCTGACTGCAAAACTGAAGTTCTCAACACTGGAAGGGTTGGCCAGAGCCCGCCGGTGGATATGACACCAGTAAATACCACCCTTTCTTGGCAGTCGTACATCGAAGATGCTGCCTCTTCTACTGATGACAATACATTTACATTGGATGGGCTCTATGAGCAAATAAATATCACTAGGGATGCAACAGACTACTTATGGTACATGACAGATATCACAATAGGTCCTAATGAAGAGTTTCTAAAGAATGGATCTTACCCTCTTCTGACTATCGATTCAGCTGGACATGCCTTGCATGTTTTCATCAATGGTCAACTATCAGGAACTGTTTATGCAGGATTGGCATCTCCTAAATTAAGATTTAATGACACTGTGAAGCTCAGAGCTGGCATCAACAAGCTTGCTTTACTAAGCATTGCTGTTGGTCTGCCGAATGTTGGTGTGCACTTTGAGACTTGGAATGCTGGAGTTCTAGGGCCTGTCACATTGAAGGGTCTGAATTCGGGAACATGGGACATGTCCCGGTGGAAATGGACCTACAAGACTGGTATGAAAGGTGAAGCATTAAGCCTCCATACTGTTAAGGGAAGTTCTTCCGTTGAATGGGTAGAAGGACCACTATTGGCTCAAAAACAACCCCTTACATGGTACAAGTCTATATTTCATGCACCACCGGGAAATGCTCCATTAGCTTTAGATATGGTTAGCATGGGCAAAGGTCAAGTATGGATCAATGGTCAGAGCATCGGACGCCACTGGCCTGGATACATAGCACATGGTAGCTGTGGCAATTGTTCTTATGCTGGAACTTACACCGAAAACAAATGCCGAACAAATTGTGGTCAGCCGTCACAGAGATGGTACCATGTTCCGCAATCGTGGTTGAACCAGAGTGAAAATTTGTTGGTGGTGTTTGAAGAATGGGGTGGTGACCCGAGTAAGATTTCTTTGGTGGCACGAAGCTATGAAAGCTTAGGGCAGACCCTCTATAACATAGAGGGCGGCTCCAACCATTTGAGATTGCAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005819 GO:0005829 GO:0005839 GO:0005840 GO:0005856 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009524 GO:0009536 GO:0009987 GO:0015630 GO:0016020 GO:0019538 GO:0019773 GO:0019941 GO:0022626 GO:0030163 GO:0031090 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051603 GO:0071704 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

Proteasome Proteasome_A_N

Protein Analysis

747

Amino Acids

83.68

Weight (kDa)

7.59

Isoelectric Point (pI)

41.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	37 - 340	6.8e-117	Glycosyl hydrolases family 35
GHD	PF17834	363 - 418	9.9e-20	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	469 - 517	5.6e-06	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	618 - 704	2.6e-24	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014480)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51260 AT3G51260 AT5G66140
fragaria_vesca	FvH4_1g11520
malus_domestica	MD02G1128200.v1.1 MD15G1243400.v1.1
prunus_persica	Prupe.7G170800_v2.0.a1
pyrus_communis	pycom02g10020 pycom15g21440
rosa_chinensis	RchiOBHm_Chr2g0099151
rosa_laevigata	RLG00000016851
rosa_multiflora	Rmu_sc0012098.1_g000001 Rmu_sc0012711.1_g000003
rosa_roxburghii	Rroxscaffold_2G00143400
rosa_rugosa	Rorug02G0077200
rosa_samantha	Rh2AG126200
rosa_wichuraiana	Rw2G009730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	823
Acc65I	GGTACC	1 cut(s)	2073
AccB1I	GGYRCC	1 cut(s)	2073
AccB7I	CCANNNNNTGG	1 cut(s)	756
AccI	GTMKAC	1 cut(s)	782
AccIII	TCCGGA	1 cut(s)	348
AciI	CCGC	4 cut(s)	795, 1265, 2084, 2214
AclWI	GGATC	3 cut(s)	1049, 1471, 1949
AcoI	YGGCCR	2 cut(s)	182, 1255
AcsI	RAATTY	5 cut(s)	467, 557, 788, 1711, 2110
AcuI	CTGAAG	2 cut(s)	179, 1251
AcyI	GRCGYC	2 cut(s)	675, 1963
AfaI	GTAC	4 cut(s)	1313, 1415, 1862, 2075
AfiI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 1270, 1302, 1649, 1815, 1857
AflIII	ACRYGT	4 cut(s)	15, 36, 882, 1728
AgeI	ACCGGT	1 cut(s)	565
AgsI	TTSAA	7 cut(s)	551, 1102, 1107, 1702, 1814, 2098, 2129
AjnI	CCWGG	4 cut(s)	265, 589, 1196, 1972
AjuI	GAANNNNNNNTTGG	6 cut(s)	26, 58, 366, 398, 543, 575
Alw21I	GWGCWC	2 cut(s)	589, 1659
Alw26I	GTCTC	3 cut(s)	546, 638, 1658
Alw44I	GTGCAC	2 cut(s)	585, 1655
AlwI	GGATC	3 cut(s)	1049, 1471, 1949
AlwNI	CAGNNNCTG	1 cut(s)	1538
Ama87I	CYCGRG	1 cut(s)	2146
Aor13HI	TCCGGA	1 cut(s)	348
ApaLI	GTGCAC	2 cut(s)	585, 1655
ApeKI	GCWGC	6 cut(s)	455, 614, 1037, 1121, 1189, 1325
ApoI	RAATTY	5 cut(s)	467, 557, 788, 1711, 2110
ArsI	GACNNNNNNTTYG	2 cut(s)	1139, 1171
AsiGI	ACCGGT	1 cut(s)	565
Asp700I	GAANNNNTTC	2 cut(s)	1449, 1804
Asp718I	GGTACC	1 cut(s)	2073
AspS9I	GGNCC	8 cut(s)	24, 356, 527, 563, 1436, 1688, 1746, 1826
AsuC2I	CCSGG	3 cut(s)	417, 1735, 1887
AsuHPI	GGTGA	2 cut(s)	1781, 2153
AvaI	CYCGRG	1 cut(s)	2146
AvaII	GGWCC	5 cut(s)	527, 563, 1436, 1746, 1826
BaeGI	GKGCMC	3 cut(s)	255, 589, 1659
BalI	TGGCCA	1 cut(s)	1257
BanI	GGYRCC	1 cut(s)	2073
BanII	GRGCYC	2 cut(s)	1265, 1368
BbsI	GAAGAC	2 cut(s)	232, 678
Bbv12I	GWGCWC	2 cut(s)	589, 1659
BbvCI	CCTCAGC	1 cut(s)	1032
BbvI	GCAGC	6 cut(s)	467, 626, 1049, 1108, 1176, 1312
BccI	CCATC	4 cut(s)	203, 1028, 1355, 2064
BceAI	ACGGC	1 cut(s)	2044
BcgI	CGANNNNNNTGC	2 cut(s)	1307, 1341
BciT130I	CCWGG	4 cut(s)	267, 591, 1198, 1974
BciVI	GTATCC	1 cut(s)	1970
BcnI	CCSGG	3 cut(s)	417, 1735, 1887
BcoDI	GTCTC	3 cut(s)	546, 638, 1658
BfaI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
BfmI	CTRYAG	1 cut(s)	1059
BfuAI	ACCTGC	1 cut(s)	823
BfuI	GTATCC	1 cut(s)	1970
BisI	GCNGC	7 cut(s)	456, 615, 1038, 1122, 1190, 1326, 2215
BlsI	GCNGC	7 cut(s)	457, 616, 1039, 1123, 1191, 1327, 2216
Bme1390I	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
Bme18I	GGWCC	5 cut(s)	527, 563, 1436, 1746, 1826
BmeT110I	CYCGRG	1 cut(s)	2146
BmgT120I	GGNCC	8 cut(s)	24, 356, 527, 563, 1436, 1688, 1746, 1826
BmiI	GGNNCC	4 cut(s)	648, 984, 2075, 2218
BmrFI	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
BmrI	ACTGGG	1 cut(s)	651
BmsI	GCATC	6 cut(s)	940, 1312, 1384, 1565, 1611, 1965
BmuI	ACTGGG	1 cut(s)	651
BoxI	GACNNNNGTC	2 cut(s)	236, 441
BpiI	GAAGAC	2 cut(s)	232, 678
BplI	GAGNNNNNCTC	2 cut(s)	2201, 2233
BpmI	CTGGAG	1 cut(s)	1698
Bpu10I	CCTNAGC	2 cut(s)	1032, 2185
BpuMI	CCSGG	3 cut(s)	417, 1735, 1887
Bsa29I	ATCGAT	2 cut(s)	693, 1485
BsaBI	GATNNNNATC	1 cut(s)	1555
BsaHI	GRCGYC	2 cut(s)	675, 1963
BsaI	GGTCTC	1 cut(s)	638
BsaJI	CCNNGG	5 cut(s)	27, 265, 650, 977, 1196
BsaWI	WCCGGW	2 cut(s)	348, 565
Bsc4I	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 1270, 1302, 1649, 1815, 1857
Bse118I	RCCGGY	2 cut(s)	565, 1267
Bse1I	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
Bse3DI	GCAATG	3 cut(s)	465, 709, 1626
Bse8I	GATNNNNATC	1 cut(s)	1555
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	4 cut(s)	267, 591, 1198, 1974
BseCI	ATCGAT	2 cut(s)	693, 1485
BseDI	CCNNGG	5 cut(s)	27, 265, 650, 977, 1196
BseGI	GGATG	3 cut(s)	226, 1366, 1399
BseJI	GATNNNNATC	1 cut(s)	1555
BseLI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 1270, 1302, 1649, 1815, 1857
BseMI	GCAATG	3 cut(s)	465, 709, 1626
BseMII	CTCAG	5 cut(s)	165, 533, 557, 1023, 1606
BseNI	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
BseSI	GKGCMC	3 cut(s)	255, 589, 1659
BseXI	GCAGC	6 cut(s)	467, 626, 1049, 1108, 1176, 1312
BseYI	CCCAGC	1 cut(s)	260
BsgI	GTGCAG	1 cut(s)	801
BshNI	GGYRCC	1 cut(s)	2073
BshTI	ACCGGT	1 cut(s)	565
BshVI	ATCGAT	2 cut(s)	693, 1485
BsiHKAI	GWGCWC	2 cut(s)	589, 1659
BsiHKCI	CYCGRG	1 cut(s)	2146
BsiSI	CCGG	7 cut(s)	185, 349, 417, 566, 1268, 1735, 1886
BslFI	GGGAC	2 cut(s)	1717, 1739
BslI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 1270, 1302, 1649, 1815, 1857
BsmAI	GTCTC	3 cut(s)	546, 638, 1658
BsmFI	GGGAC	2 cut(s)	1717, 1739
BsmI	GAATGC	2 cut(s)	1209, 1678
Bso31I	GGTCTC	1 cut(s)	638
BsoBI	CYCGRG	1 cut(s)	2146
Bsp1286I	GDGCHC	5 cut(s)	255, 589, 1265, 1368, 1659
Bsp13I	TCCGGA	1 cut(s)	348
Bsp143I	GATC	4 cut(s)	295, 1054, 1463, 1941
Bsp19I	CCATGG	1 cut(s)	650
BspACI	CCGC	4 cut(s)	795, 1265, 2084, 2214
BspCNI	CTCAG	5 cut(s)	166, 532, 556, 1024, 1605
BspDI	ATCGAT	2 cut(s)	693, 1485
BspEI	TCCGGA	1 cut(s)	348
BspLI	GGNNCC	4 cut(s)	648, 984, 2075, 2218
BspMAI	CTGCAG	1 cut(s)	1063
BspMI	ACCTGC	1 cut(s)	823
BspPI	GGATC	3 cut(s)	1049, 1471, 1949
BspT107I	GGYRCC	1 cut(s)	2073
BspTNI	GGTCTC	1 cut(s)	638
BsrDI	GCAATG	3 cut(s)	465, 709, 1626
BsrFI	RCCGGY	2 cut(s)	565, 1267
BsrI	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
BssAI	RCCGGY	2 cut(s)	565, 1267
BssECI	CCNNGG	5 cut(s)	27, 265, 650, 977, 1196
BssMI	GATC	4 cut(s)	295, 1054, 1463, 1941
BssNAI	GTATAC	1 cut(s)	783
BssNI	GRCGYC	2 cut(s)	675, 1963
BssT1I	CCWWGG	3 cut(s)	27, 650, 977
Bst1107I	GTATAC	1 cut(s)	783
Bst2UI	CCWGG	4 cut(s)	267, 591, 1198, 1974
Bst4CI	ACNGT	5 cut(s)	51, 716, 1540, 1585, 1792
Bst6I	CTCTTC	4 cut(s)	76, 1336, 1440, 1479
BstACI	GRCGYC	2 cut(s)	675, 1963
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstC8I	GCNNGC	5 cut(s)	318, 665, 1265, 1600, 1614
BstDEI	CTNAG	7 cut(s)	174, 519, 543, 1032, 1592, 1622, 2185
BstDSI	CCRYGG	1 cut(s)	650
BstEII	GGTNACC	1 cut(s)	2141
BstF5I	GGATG	3 cut(s)	226, 1366, 1399
BstKTI	GATC	4 cut(s)	298, 1057, 1466, 1944
BstMAI	GTCTC	3 cut(s)	546, 638, 1658
BstMBI	GATC	4 cut(s)	295, 1054, 1463, 1941
BstNI	CCWGG	4 cut(s)	267, 591, 1198, 1974
BstNSI	RCATGY	6 cut(s)	19, 40, 886, 1502, 1511, 1732
BstPAI	GACNNNNGTC	2 cut(s)	236, 441
BstPI	GGTNACC	1 cut(s)	2141
BstSCI	CCNGG	7 cut(s)	265, 415, 589, 1196, 1733, 1885, 1972
BstSFI	CTRYAG	1 cut(s)	1059
BstSLI	GKGCMC	3 cut(s)	255, 589, 1659
BstV1I	GCAGC	6 cut(s)	467, 626, 1049, 1108, 1176, 1312
BstV2I	GAAGAC	2 cut(s)	232, 678
BstX2I	RGATCY	1 cut(s)	1463
BstXI	CCANNNNNNTGG	1 cut(s)	1973
BstYI	RGATCY	1 cut(s)	1463
BstZ17I	GTATAC	1 cut(s)	783
Bsu15I	ATCGAT	2 cut(s)	693, 1485
BsuI	GTATCC	1 cut(s)	1970
BsuTUI	ATCGAT	2 cut(s)	693, 1485
BtgI	CCRYGG	1 cut(s)	650
BtsCI	GGATG	3 cut(s)	226, 1366, 1399
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	5 cut(s)	639, 1068, 1242, 1581, 1966
BveI	ACCTGC	1 cut(s)	823
Cac8I	GCNNGC	5 cut(s)	318, 665, 1265, 1600, 1614
CaiI	CAGNNNCTG	1 cut(s)	1538
Cfr10I	RCCGGY	2 cut(s)	565, 1267
Cfr13I	GGNCC	8 cut(s)	24, 356, 527, 563, 1436, 1688, 1746, 1826
ClaI	ATCGAT	2 cut(s)	693, 1485
CseI	GACGC	2 cut(s)	683, 1971
CsiI	ACCWGGT	1 cut(s)	589
Csp6I	GTAC	4 cut(s)	1312, 1414, 1861, 2074
CspAI	ACCGGT	1 cut(s)	565
CviQI	GTAC	4 cut(s)	1312, 1414, 1861, 2074
DdeI	CTNAG	7 cut(s)	174, 519, 543, 1032, 1592, 1622, 2185
DpnI	GATC	4 cut(s)	297, 1056, 1465, 1943
DpnII	GATC	4 cut(s)	295, 1054, 1463, 1941
EaeI	YGGCCR	2 cut(s)	182, 1255
Eam1104I	CTCTTC	4 cut(s)	76, 1336, 1440, 1479
EarI	CTCTTC	4 cut(s)	76, 1336, 1440, 1479
Eco130I	CCWWGG	3 cut(s)	27, 650, 977
Eco24I	GRGCYC	2 cut(s)	1265, 1368
Eco31I	GGTCTC	1 cut(s)	638
Eco32I	GATATC	1 cut(s)	1426
Eco47I	GGWCC	5 cut(s)	527, 563, 1436, 1746, 1826
Eco57I	CTGAAG	2 cut(s)	179, 1251
Eco88I	CYCGRG	1 cut(s)	2146
Eco91I	GGTNACC	1 cut(s)	2141
EcoO109I	RGGNCCY	3 cut(s)	527, 1436, 1688
EcoO65I	GGTNACC	1 cut(s)	2141
EcoRI	GAATTC	1 cut(s)	1711
EcoRII	CCWGG	4 cut(s)	265, 589, 1196, 1972
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	3 cut(s)	27, 650, 977
EcoT38I	GRGCYC	2 cut(s)	1265, 1368
ErhI	CCWWGG	3 cut(s)	27, 650, 977
FaqI	GGGAC	2 cut(s)	1717, 1739
FauI	CCCGC	2 cut(s)	788, 1272
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	7 cut(s)	456, 615, 1038, 1122, 1190, 1326, 2215
FokI	GGATG	3 cut(s)	233, 1373, 1406
FriOI	GRGCYC	2 cut(s)	1265, 1368
Fsp4HI	GCNGC	7 cut(s)	456, 615, 1038, 1122, 1190, 1326, 2215
FspBI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
GluI	GCNGC	7 cut(s)	456, 615, 1038, 1122, 1190, 1326, 2215
GsaI	CCCAGC	1 cut(s)	264
GsuI	CTGGAG	1 cut(s)	1698
HapII	CCGG	7 cut(s)	185, 349, 417, 566, 1268, 1735, 1886
HgaI	GACGC	2 cut(s)	683, 1971
Hin1I	GRCGYC	2 cut(s)	675, 1963
HincII	GTYRAC	1 cut(s)	1526
HindII	GTYRAC	1 cut(s)	1526
HindIII	AAGCTT	2 cut(s)	1610, 2182
HinfI	GANTC	5 cut(s)	133, 390, 994, 1081, 1487
HpaII	CCGG	7 cut(s)	185, 349, 417, 566, 1268, 1735, 1886
HphI	GGTGA	2 cut(s)	1781, 2153
Hpy166II	GTNNAC	5 cut(s)	587, 759, 783, 1526, 1657
Hpy188I	TCNGA	9 cut(s)	198, 431, 546, 1002, 1479, 1595, 1710, 1953, 1961
Hpy188III	TCNNGA	9 cut(s)	244, 349, 769, 959, 1085, 1158, 1217, 1533, 1716
Hpy8I	GTNNAC	5 cut(s)	587, 759, 783, 1526, 1657
HpyAV	CCTTC	6 cut(s)	123, 193, 490, 1242, 1696, 1817
HpyCH4III	ACNGT	5 cut(s)	51, 716, 1540, 1585, 1792
HpyF3I	CTNAG	7 cut(s)	174, 519, 543, 1032, 1592, 1622, 2185
Hsp92I	GRCGYC	2 cut(s)	675, 1963
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	1 cut(s)	2077
Kzo9I	GATC	4 cut(s)	295, 1054, 1463, 1941
LmnI	GCTCC	2 cut(s)	1900, 2222
Lsp1109I	GCAGC	6 cut(s)	467, 626, 1049, 1108, 1176, 1312
LweI	GCATC	6 cut(s)	940, 1312, 1384, 1565, 1611, 1965
MabI	ACCWGGT	1 cut(s)	589
MaeI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
MaeIII	GTNAC	4 cut(s)	1063, 1693, 2061, 2141
MalI	GATC	4 cut(s)	297, 1056, 1465, 1943
MboI	GATC	4 cut(s)	295, 1054, 1463, 1941
MfeI	CAATTG	1 cut(s)	2002
MflI	RGATCY	1 cut(s)	1463
MhlI	GDGCHC	5 cut(s)	255, 589, 1265, 1368, 1659
MlsI	TGGCCA	1 cut(s)	1257
MluNI	TGGCCA	1 cut(s)	1257
MlyI	GAGTC	2 cut(s)	1003, 1090
MmeI	TCCRAC	1 cut(s)	2244
Mox20I	TGGCCA	1 cut(s)	1257
MroI	TCCGGA	1 cut(s)	348
MroXI	GAANNNNTTC	2 cut(s)	1449, 1804
MscI	TGGCCA	1 cut(s)	1257
MseI	TTAA	5 cut(s)	20, 1568, 1575, 1778, 1794
MslI	CAYNNNNRTG	1 cut(s)	2068
Msp20I	TGGCCA	1 cut(s)	1257
MspA1I	CMGCKG	1 cut(s)	1493
MspI	CCGG	7 cut(s)	185, 349, 417, 566, 1268, 1735, 1886
MspR9I	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
MunI	CAATTG	1 cut(s)	2002
Mva1269I	GAATGC	2 cut(s)	1209, 1678
MvaI	CCWGG	4 cut(s)	267, 591, 1198, 1974
NciI	CCSGG	3 cut(s)	417, 1735, 1887
NcoI	CCATGG	1 cut(s)	650
NdeII	GATC	4 cut(s)	295, 1054, 1463, 1941
NlaIV	GGNNCC	4 cut(s)	648, 984, 2075, 2218
NmuCI	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
NspI	RCATGY	6 cut(s)	19, 40, 886, 1502, 1511, 1732
PciI	ACATGT	4 cut(s)	15, 36, 882, 1728
PctI	GAATGC	2 cut(s)	1209, 1678
PdmI	GAANNNNTTC	2 cut(s)	1449, 1804
PfeI	GAWTC	3 cut(s)	133, 390, 1487
PflMI	CCANNNNNTGG	1 cut(s)	756
PfoI	TCCNGGA	1 cut(s)	415
PinAI	ACCGGT	1 cut(s)	565
PkrI	GCNGC	7 cut(s)	457, 616, 1039, 1123, 1191, 1327, 2216
PleI	GAGTC	2 cut(s)	1002, 1089
PpsI	GAGTC	2 cut(s)	1002, 1089
PpuMI	RGGWCCY	2 cut(s)	527, 1436
PscI	ACATGT	4 cut(s)	15, 36, 882, 1728
PshAI	GACNNNNGTC	2 cut(s)	236, 441
Psp5II	RGGWCCY	2 cut(s)	527, 1436
Psp6I	CCWGG	4 cut(s)	265, 589, 1196, 1972
PspEI	GGTNACC	1 cut(s)	2141
PspFI	CCCAGC	1 cut(s)	260
PspGI	CCWGG	4 cut(s)	265, 589, 1196, 1972
PspN4I	GGNNCC	4 cut(s)	648, 984, 2075, 2218
PspPI	GGNCC	8 cut(s)	24, 356, 527, 563, 1436, 1688, 1746, 1826
PspPPI	RGGWCCY	2 cut(s)	527, 1436
PstI	CTGCAG	1 cut(s)	1063
PstNI	CAGNNNCTG	1 cut(s)	1538
PsuI	RGATCY	1 cut(s)	1463
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	4 cut(s)	1313, 1415, 1862, 2075
RsaNI	GTAC	4 cut(s)	1312, 1414, 1861, 2074
RseI	CAYNNNNRTG	1 cut(s)	2068
SaqAI	TTAA	5 cut(s)	20, 1568, 1575, 1778, 1794
SatI	GCNGC	7 cut(s)	456, 615, 1038, 1122, 1190, 1326, 2215
Sau3AI	GATC	4 cut(s)	295, 1054, 1463, 1941
Sau96I	GGNCC	8 cut(s)	24, 356, 527, 563, 1436, 1688, 1746, 1826
SchI	GAGTC	2 cut(s)	1003, 1090
ScrFI	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
SduI	GDGCHC	5 cut(s)	255, 589, 1265, 1368, 1659
SexAI	ACCWGGT	1 cut(s)	589
SfaNI	GCATC	6 cut(s)	940, 1312, 1384, 1565, 1611, 1965
SfcI	CTRYAG	1 cut(s)	1059
SgrAI	CRCCGGYG	1 cut(s)	1267
SinI	GGWCC	5 cut(s)	527, 563, 1436, 1746, 1826
SmiMI	CAYNNNNRTG	1 cut(s)	2068
SsiI	CCGC	4 cut(s)	795, 1265, 2084, 2214
SspI	AATATT	2 cut(s)	275, 1007
SspMI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
StyD4I	CCNGG	7 cut(s)	265, 415, 589, 1196, 1733, 1885, 1972
StyI	CCWWGG	3 cut(s)	27, 650, 977
TaaI	ACNGT	5 cut(s)	51, 716, 1540, 1585, 1792
TaqI	TCGA	3 cut(s)	693, 1317, 1485
TaqII	GACCGA	1 cut(s)	924
TauI	GCSGC	1 cut(s)	2217
TfiI	GAWTC	3 cut(s)	133, 390, 1487
Tru1I	TTAA	5 cut(s)	20, 1568, 1575, 1778, 1794
Tru9I	TTAA	5 cut(s)	20, 1568, 1575, 1778, 1794
TscAI	CASTG	5 cut(s)	646, 1068, 1249, 1588, 1973
TseFI	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
TseI	GCWGC	6 cut(s)	455, 614, 1037, 1121, 1189, 1325
Tsp45I	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
TspGWI	ACGGA	1 cut(s)	1798
TspRI	CASTG	5 cut(s)	646, 1068, 1249, 1588, 1973
Van91I	CCANNNNNTGG	1 cut(s)	756
VneI	GTGCAC	2 cut(s)	585, 1655
VpaK11BI	GGWCC	5 cut(s)	527, 563, 1436, 1746, 1826
XapI	RAATTY	5 cut(s)	467, 557, 788, 1711, 2110
XbaI	TCTAGA	1 cut(s)	958
XceI	RCATGY	6 cut(s)	19, 40, 886, 1502, 1511, 1732
XmiI	GTMKAC	1 cut(s)	782
XmnI	GAANNNNTTC	2 cut(s)	1449, 1804
XspI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.