Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0018421

Physical Location & Seq

Genomic Coordinates Reverse (-)

25911896 .. 25917270

Gene Structure 5375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0248500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGTTGCGAAGGTCCATTCTCCAAATTTCGTCGCGTCGTGCCGTTCGGAGGATCCAAAGTCAGCACGTTCCTAGGTTTTTGAGAAAGGAGTTCTCCGCCGCGGTCCAGAAGAATCCGGCGGCCGCTCAGCCCGGCGGTCCGGGCAAGCCACCGGAGAAGTCTGGCGGTTCAAACGCTCTTATCTTTGGAGGTCTTGTTGTTGGTGGAGGGGCTGCTTTGGCTTACGGAACTGGCTATCTGGACCCGATTCTCGGCCAGAAGAAGCAGCCGGAACCGGAAGTTGAAGTGATTGTCAATGAGGATGTAGGTGTGGAAGAGAATAGTAGCAAACTGAGCTTTGCTCCTGAGGTTTCTGAGGAGAGGAGTGATGCACAGTCAGAGGATGTTGCCAAGTTTGAAGGTTCGGGTGAAAGCGAGTCGAAGGTGGAGGATAAATCTGTGGTCAGTGATGTAACAGCTGAGAAGGATTTGCGGGAGGTTTCGCAAAATGCAAATGTTGGAGTATCGTCTGAAGAGAATGTAGATGATAAAAGTGTAGAGGAGAAAACTAGTGAGGTGCCCAAGGAGGAGGTTGAAACTGCACCGGTGTTTACCGAGATTGATCAGCAAGAGAATGAGATTAAAGCATTGGCACCTCAACAGGAAATCATAGAAGACAAGGCACAGGATGCAATAGCTAATGTTGAAGAACCACCAAGTTCTTTGCTCAGTGAATATAATCTGAAGGATGAGGCTGATGGAGGCAGTGAGACTAATATTAGTACACAAGGCAGTAATGAATACAATCCACTTCCTAAAGAAAAAGAGGCCTTAATTGGTGCTATTGAAGGGTTGGATGATGCTTACATATCCAAAGATGGAAAGTTAGTTCTTGACTTCTTGCAAGCAATTCATGCTGCTGAAAAAAGGCAAGCTGAGTTAGATGCTCGTGTTTCTTCTGAAGAAAAGAGAGCATTAAAGGAGAAGTATGAAAAGAAACTGAAGGATGCTGGCATTAGGGAAATGATGCTTGCAGAAGAGGCAGCAATGCTAGACAAGGAATTAAAGAGAGAAAGAGCAAAAGCAGTTGCTGCTCTCAAGTCACTTCAAGAAAAACTTGAAGAGAAATATAAGACAGAACTTGAGCAGAAGGAAAACGAAGCAGAAATGAAGTTAAAAAAGGTTGAGGAATTAGCAAAAGCTGAACTGGCTGCCACAATTGCAAGTGAGAAGGCATCCCAGATTGAGAAAATGACAGAAGCAAATCTTCATATAAATGCCTTGTGTGTTGCATTCTATGCAAGATCTGAAGAAGCTCGTCAGACTCACTCTGCTCACAAGCTTGCTTTGGGGGCACTTGCACTGGAAGATGCACTTTCCAAAGGGTTACCAATCCACACAGAAATAGAGGCTTTGGACACTTATCTTGAAGGCATTGATAAAAATTCAATTTTGGATTTGGTCCTATCATCACTTCCTGAGGAAACACGGAGGAGTGGCACAGATACCTTGTTGCAATTGAATCAGAAGTTTGATGCCTTAAAAGGGACAGTACGACACTTCAGCCTAATCCCTCCTGGTGGCGGCGGCATTTTGGCTCACTCTTTAGCACGGATAGCATCCTGGTTGAAGGTGAAGGAAGTAGATCAATCTGGAGATGGGATTGAGTCTATCATCAATAAAGTGGAGTGCTACCTCGCTGAAGGAAAATTAGTCGAAGCAGCAGAGGCACTAGAAGAAGGTGTCAAGGGCACCCAAGCAGCAGAAATTGTGGGTGATTGGGTGAAGCGTGCTAGGAATAGGGCTATCACGGAGCAAGCTCTGACACTTCTCGAATCATATGCCACATCCATTAGCGTCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003735 GO:0003824 GO:0003916 GO:0003918 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007389 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010467 GO:0014070 GO:0015935 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019538 GO:0022402 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042254 GO:0042623 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0046983 GO:0048856 GO:0048869 GO:0050896 GO:0061505 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0140097 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HATPase_c_3 Topo-VIb_trans

Protein Analysis

614

Amino Acids

66.85

Weight (kDa)

4.84

Isoelectric Point (pI)

55.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mitofilin	PF09731	118 - 609	1.8e-67	Mitochondrial inner membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0018421)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g23500
rosa_laevigata	RLG00000007024
rosa_multiflora	Rmu_sc0002225.1_g000013
rosa_roxburghii	Rroxscaffold_5G00371730
rosa_rugosa	Rorug02G0248500
rosa_samantha	Rh4AG299900 Rh4BG307000 Rh4CG317300 Rh4DG298900
rosa_wichuraiana	Rw4G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	556, 631, 1730
AccBSI	CCGCTC	1 cut(s)	125
AccII	CGCG	2 cut(s)	34, 101
AclWI	GGATC	2 cut(s)	46, 59
AcoI	YGGCCR	2 cut(s)	120, 253
AcsI	RAATTY	2 cut(s)	24, 1423
AcuI	CTGAAG	7 cut(s)	531, 743, 960, 1001, 1308, 1525, 1701
AfaI	GTAC	2 cut(s)	763, 1533
AfiI	CCNNNNNNNGG	5 cut(s)	48, 251, 1524, 1559, 1562
AgeI	ACCGGT	1 cut(s)	583
AhlI	ACTAGT	1 cut(s)	548
AjnI	CCWGG	2 cut(s)	1555, 1601
AloI	GAACNNNNNNTCC	2 cut(s)	852, 884
AluBI	AGCT	8 cut(s)	336, 458, 677, 914, 1181, 1295, 1321, 1799
AluI	AGCT	8 cut(s)	336, 458, 677, 914, 1181, 1295, 1321, 1799
Alw26I	GTCTC	1 cut(s)	743
AlwI	GGATC	2 cut(s)	46, 59
AlwNI	CAGNNNCTG	1 cut(s)	1070
AoxI	GGCC	3 cut(s)	120, 253, 807
ApeKI	GCWGC	8 cut(s)	212, 265, 896, 1022, 1070, 1190, 1700, 1739
ApoI	RAATTY	2 cut(s)	24, 1423
AsiGI	ACCGGT	1 cut(s)	583
AspA2I	CCTAGG	1 cut(s)	71
AspS9I	GGNCC	5 cut(s)	12, 103, 137, 241, 1441
AsuC2I	CCSGG	2 cut(s)	132, 141
AsuHPI	GGTGA	4 cut(s)	419, 1624, 1766, 1774
AvaII	GGWCC	5 cut(s)	12, 103, 137, 241, 1441
AvrII	CCTAGG	1 cut(s)	71
AxyI	CCTNAGG	2 cut(s)	345, 1458
BaeGI	GKGCMC	3 cut(s)	561, 1336, 1733
BamHI	GGATCC	1 cut(s)	51
BanI	GGYRCC	3 cut(s)	556, 631, 1730
BauI	CACGAG	1 cut(s)	927
BbsI	GAAGAC	1 cut(s)	660
BbvI	GCAGC	8 cut(s)	199, 277, 883, 1034, 1057, 1177, 1712, 1751
BccI	CCATC	3 cut(s)	731, 851, 1631
BceAI	ACGGC	1 cut(s)	26
BcgI	CGANNNNNNTGC	2 cut(s)	1802, 1836
BciT130I	CCWGG	2 cut(s)	1557, 1603
BclI	TGATCA	1 cut(s)	601
BcnI	CCSGG	2 cut(s)	132, 141
BcoDI	GTCTC	1 cut(s)	743
BcuI	ACTAGT	1 cut(s)	548
BfaI	CTAG	5 cut(s)	72, 549, 1031, 1712, 1773
BglII	AGATCT	1 cut(s)	1283
BlnI	CCTAGG	1 cut(s)	71
BlpI	GCTNAGC	1 cut(s)	126
Bme1390I	CCNGG	4 cut(s)	132, 141, 1557, 1603
Bme18I	GGWCC	5 cut(s)	12, 103, 137, 241, 1441
BmgT120I	GGNCC	5 cut(s)	12, 103, 137, 241, 1441
BmiI	GGNNCC	6 cut(s)	53, 243, 273, 558, 633, 1732
BmrFI	CCNGG	4 cut(s)	132, 141, 1557, 1603
BpiI	GAAGAC	1 cut(s)	660
BplI	GAGNNNNNCTC	2 cut(s)	325, 357
BpmI	CTGGAG	1 cut(s)	1653
Bpu1102I	GCTNAGC	1 cut(s)	126
BpuEI	CTTGAG	2 cut(s)	1061, 1142
BpuMI	CCSGG	2 cut(s)	132, 141
BsaJI	CCNNGG	3 cut(s)	71, 99, 561
BsaWI	WCCGGW	3 cut(s)	151, 274, 583
BsaXI	ACNNNNNCTCC	2 cut(s)	180, 210
Bsc4I	CCNNNNNNNGG	5 cut(s)	48, 251, 1524, 1559, 1562
Bse118I	RCCGGY	1 cut(s)	583
Bse1I	ACTGG	3 cut(s)	235, 1191, 1347
Bse21I	CCTNAGG	2 cut(s)	345, 1458
Bse3DI	GCAATG	1 cut(s)	1032
BseBI	CCWGG	2 cut(s)	1557, 1603
BseDI	CCNNGG	3 cut(s)	71, 99, 561
BseGI	GGATG	9 cut(s)	307, 388, 673, 733, 841, 991, 1214, 1598, 1826
BseLI	CCNNNNNNNGG	5 cut(s)	48, 251, 1524, 1559, 1562
BseMI	GCAATG	1 cut(s)	1032
BseMII	CTCAG	8 cut(s)	140, 323, 336, 345, 450, 721, 906, 1449
BseNI	ACTGG	3 cut(s)	235, 1191, 1347
BseRI	GAGGAG	5 cut(s)	371, 376, 554, 581, 1486
BseSI	GKGCMC	3 cut(s)	561, 1336, 1733
BseX3I	CGGCCG	1 cut(s)	120
BseXI	GCAGC	8 cut(s)	199, 277, 883, 1034, 1057, 1177, 1712, 1751
BsgI	GTGCAG	1 cut(s)	564
Bsh1236I	CGCG	2 cut(s)	34, 101
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	3 cut(s)	122, 255, 809
BshNI	GGYRCC	3 cut(s)	556, 631, 1730
BshTI	ACCGGT	1 cut(s)	583
BsiEI	CGRYCG	1 cut(s)	123
BsiSI	CCGG	7 cut(s)	116, 132, 140, 152, 269, 275, 584
BslFI	GGGAC	1 cut(s)	1540
BslI	CCNNNNNNNGG	5 cut(s)	48, 251, 1524, 1559, 1562
BsmAI	GTCTC	1 cut(s)	743
BsmFI	GGGAC	1 cut(s)	1540
BsmI	GAATGC	1 cut(s)	1271
BsnI	GGCC	3 cut(s)	122, 255, 809
Bsp1286I	GDGCHC	3 cut(s)	561, 1336, 1733
Bsp143I	GATC	4 cut(s)	51, 601, 1283, 1624
Bsp1720I	GCTNAGC	1 cut(s)	126
BspANI	GGCC	3 cut(s)	122, 255, 809
BspCNI	CTCAG	8 cut(s)	139, 324, 337, 346, 451, 720, 907, 1450
BspFNI	CGCG	2 cut(s)	34, 101
BspLI	GGNNCC	6 cut(s)	53, 243, 273, 558, 633, 1732
BspPI	GGATC	2 cut(s)	46, 59
BspT107I	GGYRCC	3 cut(s)	556, 631, 1730
BsrBI	CCGCTC	1 cut(s)	125
BsrDI	GCAATG	1 cut(s)	1032
BsrFI	RCCGGY	1 cut(s)	583
BsrI	ACTGG	3 cut(s)	235, 1191, 1347
BssAI	RCCGGY	1 cut(s)	583
BssECI	CCNNGG	3 cut(s)	71, 99, 561
BssMI	GATC	4 cut(s)	51, 601, 1283, 1624
BssSI	CACGAG	1 cut(s)	927
BssT1I	CCWWGG	2 cut(s)	71, 561
Bst2BI	CACGAG	1 cut(s)	927
Bst2UI	CCWGG	2 cut(s)	1557, 1603
Bst4CI	ACNGT	2 cut(s)	375, 1531
Bst6I	CTCTTC	4 cut(s)	309, 507, 1011, 1095
BstAPI	GCANNNNNTGC	4 cut(s)	668, 893, 1070, 1277
BstC8I	GCNNGC	8 cut(s)	146, 885, 912, 991, 1011, 1323, 1770, 1797
BstDEI	CTNAG	8 cut(s)	126, 332, 345, 354, 459, 707, 915, 1458
BstDSI	CCRYGG	1 cut(s)	99
BstEII	GGTNACC	1 cut(s)	1365
BstF5I	GGATG	9 cut(s)	307, 388, 673, 733, 841, 991, 1214, 1598, 1826
BstFNI	CGCG	2 cut(s)	34, 101
BstKTI	GATC	4 cut(s)	54, 604, 1286, 1627
BstMAI	GTCTC	1 cut(s)	743
BstMBI	GATC	4 cut(s)	51, 601, 1283, 1624
BstMCI	CGRYCG	1 cut(s)	123
BstNI	CCWGG	2 cut(s)	1557, 1603
BstPI	GGTNACC	1 cut(s)	1365
BstSCI	CCNGG	4 cut(s)	130, 139, 1555, 1601
BstSLI	GKGCMC	3 cut(s)	561, 1336, 1733
BstUI	CGCG	2 cut(s)	34, 101
BstV1I	GCAGC	8 cut(s)	199, 277, 883, 1034, 1057, 1177, 1712, 1751
BstV2I	GAAGAC	1 cut(s)	660
BstX2I	RGATCY	2 cut(s)	51, 1283
BstYI	RGATCY	2 cut(s)	51, 1283
BstZI	CGGCCG	1 cut(s)	120
Bsu36I	CCTNAGG	2 cut(s)	345, 1458
BsuRI	GGCC	3 cut(s)	122, 255, 809
BtgI	CCRYGG	1 cut(s)	99
BtsCI	GGATG	9 cut(s)	307, 388, 673, 733, 841, 991, 1214, 1598, 1826
BtsI	GCAGTG	1 cut(s)	751
BtsIMutI	CAGTG	4 cut(s)	451, 715, 751, 1340
Cac8I	GCNNGC	8 cut(s)	146, 885, 912, 991, 1011, 1323, 1770, 1797
CaiI	CAGNNNCTG	1 cut(s)	1070
CciNI	GCGGCCGC	1 cut(s)	120
Cfr10I	RCCGGY	1 cut(s)	583
Cfr13I	GGNCC	5 cut(s)	12, 103, 137, 241, 1441
Cfr42I	CCGCGG	1 cut(s)	102
CpoI	CGGWCCG	1 cut(s)	137
CseI	GACGC	2 cut(s)	23, 1825
Csp6I	GTAC	2 cut(s)	762, 1532
CspAI	ACCGGT	1 cut(s)	583
CspI	CGGWCCG	1 cut(s)	137
CviAII	CATG	1 cut(s)	893
CviQI	GTAC	2 cut(s)	762, 1532
DdeI	CTNAG	8 cut(s)	126, 332, 345, 354, 459, 707, 915, 1458
DpnI	GATC	4 cut(s)	53, 603, 1285, 1626
DpnII	GATC	4 cut(s)	51, 601, 1283, 1624
EaeI	YGGCCR	2 cut(s)	120, 253
EagI	CGGCCG	1 cut(s)	120
Eam1104I	CTCTTC	4 cut(s)	309, 507, 1011, 1095
EarI	CTCTTC	4 cut(s)	309, 507, 1011, 1095
EciI	GGCGGA	1 cut(s)	85
EclXI	CGGCCG	1 cut(s)	120
Eco130I	CCWWGG	2 cut(s)	71, 561
Eco147I	AGGCCT	1 cut(s)	809
Eco47I	GGWCC	5 cut(s)	12, 103, 137, 241, 1441
Eco52I	CGGCCG	1 cut(s)	120
Eco57I	CTGAAG	7 cut(s)	531, 743, 960, 1001, 1308, 1525, 1701
Eco81I	CCTNAGG	2 cut(s)	345, 1458
Eco91I	GGTNACC	1 cut(s)	1365
EcoO65I	GGTNACC	1 cut(s)	1365
EcoRII	CCWGG	2 cut(s)	1555, 1601
EcoT14I	CCWWGG	2 cut(s)	71, 561
ErhI	CCWWGG	2 cut(s)	71, 561
FaeI	CATG	1 cut(s)	896
FalI	AAGNNNNNCTT	6 cut(s)	1080, 1112, 1230, 1262, 1338, 1370
FaqI	GGGAC	1 cut(s)	1540
FatI	CATG	1 cut(s)	892
FauI	CCCGC	1 cut(s)	465
FauNDI	CATATG	1 cut(s)	1819
FbaI	TGATCA	1 cut(s)	601
FokI	GGATG	9 cut(s)	314, 395, 680, 740, 848, 998, 1201, 1585, 1813
FspBI	CTAG	5 cut(s)	72, 549, 1031, 1712, 1773
GsuI	CTGGAG	1 cut(s)	1653
HaeIII	GGCC	3 cut(s)	122, 255, 809
HapII	CCGG	7 cut(s)	116, 132, 140, 152, 269, 275, 584
HgaI	GACGC	2 cut(s)	23, 1825
Hin1II	CATG	1 cut(s)	896
HindIII	AAGCTT	1 cut(s)	1319
HinfI	GANTC	7 cut(s)	112, 247, 416, 1303, 1501, 1646, 1814
HpaII	CCGG	7 cut(s)	116, 132, 140, 152, 269, 275, 584
HphI	GGTGA	4 cut(s)	419, 1624, 1766, 1774
Hpy166II	GTNNAC	2 cut(s)	591, 764
Hpy188III	TCNNGA	9 cut(s)	106, 239, 344, 872, 1088, 1406, 1457, 1632, 1811
Hpy8I	GTNNAC	2 cut(s)	591, 764
Hpy99I	CGWCG	2 cut(s)	34, 39
HpyCH4III	ACNGT	2 cut(s)	375, 1531
HpyCH4IV	ACGT	1 cut(s)	66
HpyF3I	CTNAG	8 cut(s)	126, 332, 345, 354, 459, 707, 915, 1458
HpySE526I	ACGT	1 cut(s)	66
Hsp92II	CATG	1 cut(s)	896
Ksp22I	TGATCA	1 cut(s)	601
KspI	CCGCGG	1 cut(s)	102
Kzo9I	GATC	4 cut(s)	51, 601, 1283, 1624
LmnI	GCTCC	2 cut(s)	346, 1792
Lsp1109I	GCAGC	8 cut(s)	199, 277, 883, 1034, 1057, 1177, 1712, 1751
MaeI	CTAG	5 cut(s)	72, 549, 1031, 1712, 1773
MaeII	ACGT	1 cut(s)	66
MaeIII	GTNAC	4 cut(s)	451, 1080, 1365, 1837
MalI	GATC	4 cut(s)	53, 603, 1285, 1626
MbiI	CCGCTC	1 cut(s)	125
MboI	GATC	4 cut(s)	51, 601, 1283, 1624
MfeI	CAATTG	2 cut(s)	1197, 1496
MflI	RGATCY	2 cut(s)	51, 1283
MhlI	GDGCHC	3 cut(s)	561, 1336, 1733
MlyI	GAGTC	3 cut(s)	425, 1297, 1655
MmeI	TCCRAC	2 cut(s)	478, 813
MseI	TTAA	6 cut(s)	621, 812, 956, 1043, 1154, 1520
MslI	CAYNNNNRTG	1 cut(s)	1254
MspA1I	CMGCKG	2 cut(s)	101, 458
MspI	CCGG	7 cut(s)	116, 132, 140, 152, 269, 275, 584
MspR9I	CCNGG	4 cut(s)	132, 141, 1557, 1603
MunI	CAATTG	2 cut(s)	1197, 1496
Mva1269I	GAATGC	1 cut(s)	1271
MvaI	CCWGG	2 cut(s)	1557, 1603
MvnI	CGCG	2 cut(s)	34, 101
NciI	CCSGG	2 cut(s)	132, 141
NdeI	CATATG	1 cut(s)	1819
NdeII	GATC	4 cut(s)	51, 601, 1283, 1624
NlaIII	CATG	1 cut(s)	896
NlaIV	GGNNCC	6 cut(s)	53, 243, 273, 558, 633, 1732
NmeAIII	GCCGAG	1 cut(s)	231
NmuCI	GTSAC	2 cut(s)	1080, 1837
NotI	GCGGCCGC	1 cut(s)	120
PceI	AGGCCT	1 cut(s)	809
PctI	GAATGC	1 cut(s)	1271
PfeI	GAWTC	4 cut(s)	112, 247, 1501, 1814
PinAI	ACCGGT	1 cut(s)	583
PleI	GAGTC	3 cut(s)	424, 1297, 1654
PpsI	GAGTC	3 cut(s)	424, 1297, 1654
Psp6I	CCWGG	2 cut(s)	1555, 1601
PspEI	GGTNACC	1 cut(s)	1365
PspGI	CCWGG	2 cut(s)	1555, 1601
PspN4I	GGNNCC	6 cut(s)	53, 243, 273, 558, 633, 1732
PspPI	GGNCC	5 cut(s)	12, 103, 137, 241, 1441
PstNI	CAGNNNCTG	1 cut(s)	1070
PsuI	RGATCY	2 cut(s)	51, 1283
PvuII	CAGCTG	1 cut(s)	458
RsaI	GTAC	2 cut(s)	763, 1533
RsaNI	GTAC	2 cut(s)	762, 1532
RseI	CAYNNNNRTG	1 cut(s)	1254
Rsr2I	CGGWCCG	1 cut(s)	137
RsrII	CGGWCCG	1 cut(s)	137
SacII	CCGCGG	1 cut(s)	102
SaqAI	TTAA	6 cut(s)	621, 812, 956, 1043, 1154, 1520
Sau3AI	GATC	4 cut(s)	51, 601, 1283, 1624
Sau96I	GGNCC	5 cut(s)	12, 103, 137, 241, 1441
SchI	GAGTC	3 cut(s)	425, 1297, 1655
ScrFI	CCNGG	4 cut(s)	132, 141, 1557, 1603
SduI	GDGCHC	3 cut(s)	561, 1336, 1733
Sfr303I	CCGCGG	1 cut(s)	102
SgrAI	CRCCGGYG	1 cut(s)	583
SgrBI	CCGCGG	1 cut(s)	102
SinI	GGWCC	5 cut(s)	12, 103, 137, 241, 1441
SmiMI	CAYNNNNRTG	1 cut(s)	1254
SmlI	CTYRAG	2 cut(s)	1076, 1121
SmoI	CTYRAG	2 cut(s)	1076, 1121
SpeI	ACTAGT	1 cut(s)	548
SseBI	AGGCCT	1 cut(s)	809
SspI	AATATT	1 cut(s)	757
SspMI	CTAG	5 cut(s)	72, 549, 1031, 1712, 1773
StuI	AGGCCT	1 cut(s)	809
StyD4I	CCNGG	4 cut(s)	130, 139, 1555, 1601
StyI	CCWWGG	2 cut(s)	71, 561
TaaI	ACNGT	2 cut(s)	375, 1531
TaiI	ACGT	1 cut(s)	69
TaqI	TCGA	3 cut(s)	419, 1695, 1812
TatI	WGTACW	1 cut(s)	761
TauI	GCSGC	5 cut(s)	101, 122, 125, 1566, 1569
TfiI	GAWTC	4 cut(s)	112, 247, 1501, 1814
Tru1I	TTAA	6 cut(s)	621, 812, 956, 1043, 1154, 1520
Tru9I	TTAA	6 cut(s)	621, 812, 956, 1043, 1154, 1520
TscAI	CASTG	4 cut(s)	451, 715, 751, 1347
TseFI	GTSAC	2 cut(s)	1080, 1837
TseI	GCWGC	8 cut(s)	212, 265, 896, 1022, 1070, 1190, 1700, 1739
Tsp45I	GTSAC	2 cut(s)	1080, 1837
TspDTI	ATGAA	5 cut(s)	792, 881, 984, 1163, 1238
TspGWI	ACGGA	4 cut(s)	240, 1483, 1606, 1805
TspRI	CASTG	4 cut(s)	451, 715, 751, 1347
VpaK11BI	GGWCC	5 cut(s)	12, 103, 137, 241, 1441
XapI	RAATTY	2 cut(s)	24, 1423
XmaJI	CCTAGG	1 cut(s)	71
XspI	CTAG	5 cut(s)	72, 549, 1031, 1712, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.