Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008797

Physical Location & Seq

Genomic Coordinates Reverse (-)

30321590 .. 30324252

Gene Structure 2663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0281000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGGTCAGAAGGCTTGCGCTAACTGATGATGAGGCGCAGGAGGTTGTTCTGCCAGACAACCCAGATCTGTGGAAGCCAAAGAAGTTTCTTTTGGTTGGGAGGCTGATGACCGCCAAGCCCTACAACAAGGAGGCCTTGATGGGGACATTGAAGGCTCTGTGGTCTCCGAAGAATAACCCTCGGGGGCAAACCAGTGTGACGGCTTGTTCTCTGGAAGTGGCGGCGACAGATGGTAGAAATGATCTAGTGGGTGTTTCGCTAAACTGGCAACTATTTTGGATCCGTGCATGGGGGGTTCCGCCACTGTATATGGAGAAAGAAACAGGGGTGAGGGTCGGGAACTCGGTTGGGCGTTATGTTCGTATGGATGAACCAACTCATGGGGTGTATTTGGGTACGTCGTTGAAGGCGGAGAGAAGGGATAAGTGGATGGCGGAGAAGGCCTCTTTGTGGCCGAGGGAAGAGCAGGAGGCTAACTGGACAGGATGTCGCTATGGGTTGGTGGAGAAAGTCAAGGCAGGCTGGTCCATGCAGGCGCCGGAATTCACTTTGTCCGGTATGGTGAGGATGCGGTCGGAATGGGAGGAGGATGAATCGCCACAGCAGGTAGGCGATGGCATGGAGGTTGATTCGTTCGGCGGTGGGTCTGTGCACAGGGGGGAGGGGGTGTCCAAACGGCGGCGGACTGGTGACAGGCAAGCGGAGGTAGCGGCGAATCTGGGATTAGCTGGTACTCAGGATTTGCAGGAGGTACCAATTAATGCTTGCCCTAAATTGACTCATGCGTTAATGCTCGCTGAGGGTGGTTTTGGTAAGGTGGGCGATAAAATTGAGGGGAGGAAAAAATTACACGGAGTTAACTCCGATTGTGGGGGATCTGGTGTTGGTACTTCGCTGATTGAGGAGGGCGTAGTAAGCACGCAAATGGGGAAGGTGGATAAGGGAGGTGTAGCTGGGCCATTTACGTTGGGCCATGAGATTAATGAGGTGGAACGCTCATGTGATTTGAAGGATAATGGTGGGGCTAAGCCTGTGCCCCATAATAGTGGAAAAAAAGGTCCAGGTAAGAAGTTGCAATTGCATGGTGTGAGTTTGCATGGTGGTCCACTAATTGGGGACCAATTAAAGGATGCTTTGTCCTTGGACTCTCATAGGCCAAATGGGAAGGATGCCATGCAGCGTAGTGGTAAGGGAAGGAAGGGATTTCCAGTGGGAGGTCGTCGTAAGAAGGGATCTAATGGTGGTGTGGTCGTTTCAGAATCTGCTAAATCGAGCCCTGGGCGTGCTCTGAATTGTCCTTCCATGATGGGTATTCGTGGCCAGCTAGGGTGGAAACATGGGTTGGTAGTGGACTGTAAAATATCTACTAAAAGAAAGGGCAAAAGGAAAAGTAGGTCTGGGGGCTTGGCCTTGCTTTGGAAGGATGATGTTAAAATAGAGTTGATTTCTTTGTCGGAAAGTCACATTGATGTGCTTGTGGGTGAGGTTGATGATCCGAAAAGGTGGAGGTTTACGGGGGTCTACGGTCAACCAAAGTTAGAGAATCGTCATAAGACTTGGTTGCTTCTGAGACAACTTAGCCTGCAAGGTAATGGTCCATGGGTGGTGGGAGGCGACTGTAACGAGATTACTTCTTTAGCTGATAAAATGGGGGGTGCATTGAGAAGTTCGAGCCAGATGGCGGGCCTCCAGGATACTCTGAACTTTTGTGAACTGGAGGATATCCAGTTTACGGGACCTCGGTTTACCTGGAAAGGCAAGAGAAATGGCGAAGAGGTGAAAATTAGGTTGGATCAGTTTACGGGTAATCAGAGTTGGAAGAGTATGTTTCCTGCGTCTTCGGTGAAGCACTTGAACCCGTCGACGTCAGACCACGTCCCTATTATCCTGGAGGTTAGGGAGTTAAAACGGCGTAGGAAGAAGAAAAAGAAAAAGAGATTCAAATTTGAGGAGTTTTGGTTGAGGGAGGAGACGTGTCGAGAGGTGGTTAAAAGTGGTTGGGAGGGTGCCACGAGGTCTGACCCCTTCCTACAGTTGTGGAACAGAACTCAGAATACAAGGAGGCTGCTTGAAGAGTGGAGCTTTGATCAGTTTGGGTCTTTGATTGCAGAGATTGAGTTGACCAGGGCCCAACTAGCCGTGTTTTTTGATAATTCCCCCTCTGCACCACCGGATGGGACAAGGGTCCAGCTCGAAGCAAAGCTCCATGATTTACTGCGTAGGGAGCATGATTATTGGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

PRKCSH-like

Protein Analysis

747

Amino Acids

83.04

Weight (kDa)

9.47

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008797)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42390
fragaria_vesca	FvH4_6g26960 FvH4_6g26960 FvH4_6g26960 FvH4_6g26960
malus_domestica	MD02G1242400.v1.1
prunus_persica	Prupe.3G125900_v2.0.a1 Prupe.3G125900_v2.0.a1 Prupe.3G125900_v2.0.a1 Prupe.3G125900_v2.0.a1
pyrus_communis	pycom02g20910
rosa_chinensis	RchiOBHm_Chr2g0128801
rosa_laevigata	RLG00000019025
rosa_multiflora	Rmu_sc0005514.1_g000021
rosa_roxburghii	Rroxscaffold_2G00115260
rosa_rugosa	Rorug02G0280800 Rorug02G0280900 Rorug02G0281000
rosa_samantha	Rh2AG333900 Rh2BG341800 Rh2CG320700 Rh2DG358500
rosa_wichuraiana	Rw2G026980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1868
Acc36I	ACCTGC	1 cut(s)	595
Acc65I	GGTACC	1 cut(s)	751
AccB1I	GGYRCC	3 cut(s)	535, 751, 2006
AccB7I	CCANNNNNTGG	3 cut(s)	380, 1112, 2174
AccI	GTMKAC	2 cut(s)	1521, 1862
AclWI	GGATC	6 cut(s)	274, 287, 883, 1240, 1487, 1800
AcoI	YGGCCR	2 cut(s)	452, 1318
AcsI	RAATTY	2 cut(s)	542, 1943
AcyI	GRCGYC	2 cut(s)	536, 1865
AfaI	GTAC	4 cut(s)	397, 733, 753, 889
AflIII	ACRYGT	1 cut(s)	1973
AgsI	TTSAA	6 cut(s)	151, 406, 1009, 1855, 1942, 2072
AhdI	GACNNNNNGTC	1 cut(s)	486
AjiI	CACGTC	2 cut(s)	1876, 1974
AjnI	CCWGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
AjuI	GAANNNNNNNTTGG	6 cut(s)	74, 106, 1325, 1357, 1772, 1804
AluBI	AGCT	7 cut(s)	728, 953, 1324, 1640, 2082, 2191, 2203
AluI	AGCT	7 cut(s)	728, 953, 1324, 1640, 2082, 2191, 2203
Alw21I	GWGCWC	2 cut(s)	654, 1288
Alw26I	GTCTC	3 cut(s)	168, 1564, 1964
Alw44I	GTGCAC	1 cut(s)	650
AlwI	GGATC	6 cut(s)	274, 287, 883, 1240, 1487, 1800
AlwNI	CAGNNNCTG	1 cut(s)	1262
Ama87I	CYCGRG	1 cut(s)	180
ApaI	GGGCCC	1 cut(s)	2131
ApaLI	GTGCAC	1 cut(s)	650
ApeKI	GCWGC	2 cut(s)	1177, 2065
ApoI	RAATTY	2 cut(s)	542, 1943
AseI	ATTAAT	2 cut(s)	759, 981
Asp718I	GGTACC	1 cut(s)	751
AspLEI	GCGC	3 cut(s)	19, 37, 538
AsuHPI	GGTGA	6 cut(s)	340, 574, 701, 1493, 1789, 1855
AvaI	CYCGRG	1 cut(s)	180
AvaII	GGWCC	7 cut(s)	525, 1058, 1103, 1117, 1595, 1736, 2185
BaeGI	GKGCMC	3 cut(s)	654, 1038, 2131
BalI	TGGCCA	1 cut(s)	1320
BamHI	GGATCC	1 cut(s)	279
BanI	GGYRCC	3 cut(s)	535, 751, 2006
BanII	GRGCYC	2 cut(s)	1277, 2131
BauI	CACGAG	1 cut(s)	2011
BbsI	GAAGAC	1 cut(s)	1830
Bbv12I	GWGCWC	2 cut(s)	654, 1288
BbvCI	CCTCAGC	1 cut(s)	798
BbvI	GCAGC	2 cut(s)	1189, 2052
BccI	CCATC	7 cut(s)	133, 224, 424, 608, 1300, 1672, 2168
BceAI	ACGGC	4 cut(s)	216, 692, 1925, 2123
BciT130I	CCWGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
BciVI	GTATCC	1 cut(s)	1687
BclI	TGATCA	1 cut(s)	2086
BcoDI	GTCTC	3 cut(s)	168, 1564, 1964
BfaI	CTAG	3 cut(s)	245, 1325, 2135
BfmI	CTRYAG	1 cut(s)	2030
BfoI	RGCGCY	1 cut(s)	539
BfuAI	ACCTGC	1 cut(s)	595
BfuI	GTATCC	1 cut(s)	1687
BglII	AGATCT	1 cut(s)	64
BisI	GCNGC	5 cut(s)	222, 680, 711, 1178, 2066
BlpI	GCTNAGC	1 cut(s)	1026
BlsI	GCNGC	5 cut(s)	223, 681, 712, 1179, 2067
Bme1390I	CCNGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
Bme18I	GGWCC	7 cut(s)	525, 1058, 1103, 1117, 1595, 1736, 2185
BmeRI	GACNNNNNGTC	1 cut(s)	486
BmeT110I	CYCGRG	1 cut(s)	180
BmgBI	CACGTC	2 cut(s)	1876, 1974
BmiI	GGNNCC	9 cut(s)	281, 297, 537, 753, 1118, 1737, 2008, 2129, 2186
BmrFI	CCNGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
BmsI	GCATC	3 cut(s)	558, 1120, 1159
BoxI	GACNNNNGTC	1 cut(s)	2183
BpiI	GAAGAC	1 cut(s)	1830
BplI	GAGNNNNNCTC	2 cut(s)	428, 460
BpmI	CTGGAG	3 cut(s)	1673, 1736, 1910
Bpu10I	CCTNAGC	1 cut(s)	798
Bpu1102I	GCTNAGC	1 cut(s)	1026
BsaHI	GRCGYC	2 cut(s)	536, 1865
BsaI	GGTCTC	1 cut(s)	168
BsaJI	CCNNGG	8 cut(s)	179, 455, 1140, 1276, 1277, 1598, 1739, 2124
BsaWI	WCCGGW	2 cut(s)	554, 2170
BsaXI	ACNNNNNCTCC	6 cut(s)	653, 683, 1943, 1958, 1973, 1988
Bse1I	ACTGG	7 cut(s)	192, 269, 482, 691, 1208, 1719, 1726
BseBI	CCWGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
BseDI	CCNNGG	8 cut(s)	179, 455, 1140, 1276, 1277, 1598, 1739, 2124
BseGI	GGATG	9 cut(s)	373, 435, 491, 573, 595, 1135, 1174, 1429, 2179
BseMII	CTCAG	4 cut(s)	749, 789, 1559, 2063
BseNI	ACTGG	7 cut(s)	192, 269, 482, 691, 1208, 1719, 1726
BseRI	GAGGAG	4 cut(s)	599, 917, 1964, 1982
BseSI	GKGCMC	3 cut(s)	654, 1038, 2131
BseXI	GCAGC	2 cut(s)	1189, 2052
BseYI	CCCAGC	1 cut(s)	953
BsgI	GTGCAG	1 cut(s)	2148
Bsh1285I	CGRYCG	1 cut(s)	575
BshNI	GGYRCC	3 cut(s)	535, 751, 2006
BsiEI	CGRYCG	1 cut(s)	575
BsiHKAI	GWGCWC	2 cut(s)	654, 1288
BsiHKCI	CYCGRG	1 cut(s)	180
BsiSI	CCGG	3 cut(s)	539, 555, 2171
BslFI	GGGAC	5 cut(s)	157, 1130, 1749, 1862, 2191
BsmAI	GTCTC	3 cut(s)	168, 1564, 1964
BsmBI	CGTCTC	1 cut(s)	1964
BsmFI	GGGAC	5 cut(s)	157, 1130, 1749, 1862, 2191
Bso31I	GGTCTC	1 cut(s)	168
BsoBI	CYCGRG	1 cut(s)	180
Bsp120I	GGGCCC	1 cut(s)	2127
Bsp1286I	GDGCHC	5 cut(s)	654, 1038, 1277, 1288, 2131
Bsp143I	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	1 cut(s)	1598
BspCNI	CTCAG	4 cut(s)	748, 790, 1560, 2062
BspLI	GGNNCC	9 cut(s)	281, 297, 537, 753, 1118, 1737, 2008, 2129, 2186
BspMI	ACCTGC	1 cut(s)	595
BspPI	GGATC	6 cut(s)	274, 287, 883, 1240, 1487, 1800
BspQI	GCTCTTC	1 cut(s)	456
BspT107I	GGYRCC	3 cut(s)	535, 751, 2006
BspTNI	GGTCTC	1 cut(s)	168
BsrI	ACTGG	7 cut(s)	192, 269, 482, 691, 1208, 1719, 1726
BssECI	CCNNGG	8 cut(s)	179, 455, 1140, 1276, 1277, 1598, 1739, 2124
BssMI	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
BssNI	GRCGYC	2 cut(s)	536, 1865
BssSI	CACGAG	1 cut(s)	2011
BssT1I	CCWWGG	2 cut(s)	1140, 1598
Bst2BI	CACGAG	1 cut(s)	2011
Bst2UI	CCWGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
Bst4CI	ACNGT	5 cut(s)	306, 1355, 1526, 1619, 2034
Bst6I	CTCTTC	4 cut(s)	456, 1767, 1814, 2067
BstACI	GRCGYC	2 cut(s)	536, 1865
BstDEI	CTNAG	6 cut(s)	735, 798, 1026, 1568, 1577, 2049
BstDSI	CCRYGG	1 cut(s)	1598
BstF5I	GGATG	9 cut(s)	373, 435, 491, 573, 595, 1135, 1174, 1429, 2179
BstH2I	RGCGCY	1 cut(s)	539
BstHHI	GCGC	3 cut(s)	19, 37, 538
BstKTI	GATC	8 cut(s)	67, 244, 282, 878, 1235, 1495, 1795, 2089
BstMAI	GTCTC	3 cut(s)	168, 1564, 1964
BstMBI	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
BstMCI	CGRYCG	1 cut(s)	575
BstMWI	GCNNNNNNNGC	6 cut(s)	265, 440, 707, 915, 2135, 2224
BstNI	CCWGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
BstPAI	GACNNNNGTC	1 cut(s)	2183
BstSCI	CCNGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
BstSFI	CTRYAG	1 cut(s)	2030
BstSLI	GKGCMC	3 cut(s)	654, 1038, 2131
BstV1I	GCAGC	2 cut(s)	1189, 2052
BstV2I	GAAGAC	1 cut(s)	1830
BstX2I	RGATCY	4 cut(s)	64, 279, 875, 1232
BstXI	CCANNNNNNTGG	2 cut(s)	69, 1046
BstYI	RGATCY	4 cut(s)	64, 279, 875, 1232
BsuI	GTATCC	1 cut(s)	1687
BtgI	CCRYGG	1 cut(s)	1598
BtgZI	GCGATG	1 cut(s)	627
BtrI	CACGTC	2 cut(s)	1876, 1974
BtsCI	GGATG	9 cut(s)	373, 435, 491, 573, 595, 1135, 1174, 1429, 2179
BtsIMutI	CAGTG	3 cut(s)	199, 302, 1215
BveI	ACCTGC	1 cut(s)	595
CaiI	CAGNNNCTG	1 cut(s)	1262
CfoI	GCGC	3 cut(s)	19, 37, 538
CseI	GACGC	1 cut(s)	1824
Csp6I	GTAC	4 cut(s)	396, 732, 752, 888
CviQI	GTAC	4 cut(s)	396, 732, 752, 888
DdeI	CTNAG	6 cut(s)	735, 798, 1026, 1568, 1577, 2049
DinI	GGCGCC	1 cut(s)	537
DpnI	GATC	8 cut(s)	66, 243, 281, 877, 1234, 1494, 1794, 2088
DpnII	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
DriI	GACNNNNNGTC	1 cut(s)	486
EaeI	YGGCCR	2 cut(s)	452, 1318
Eam1104I	CTCTTC	4 cut(s)	456, 1767, 1814, 2067
Eam1105I	GACNNNNNGTC	1 cut(s)	486
EarI	CTCTTC	4 cut(s)	456, 1767, 1814, 2067
EciI	GGCGGA	4 cut(s)	288, 425, 449, 697
Eco130I	CCWWGG	2 cut(s)	1140, 1598
Eco147I	AGGCCT	2 cut(s)	134, 443
Eco24I	GRGCYC	2 cut(s)	1277, 2131
Eco31I	GGTCTC	1 cut(s)	168
Eco32I	GATATC	1 cut(s)	1723
Eco47I	GGWCC	7 cut(s)	525, 1058, 1103, 1117, 1595, 1736, 2185
Eco88I	CYCGRG	1 cut(s)	180
EcoO109I	RGGNCCY	2 cut(s)	1736, 2127
EcoRI	GAATTC	1 cut(s)	542
EcoRII	CCWGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
EcoRV	GATATC	1 cut(s)	1723
EcoT14I	CCWWGG	2 cut(s)	1140, 1598
EcoT38I	GRGCYC	2 cut(s)	1277, 2131
EgeI	GGCGCC	1 cut(s)	537
EheI	GGCGCC	1 cut(s)	537
ErhI	CCWWGG	2 cut(s)	1140, 1598
Esp3I	CGTCTC	1 cut(s)	1964
FalI	AAGNNNNNCTT	2 cut(s)	119, 151
FaqI	GGGAC	5 cut(s)	157, 1130, 1749, 1862, 2191
FauI	CCCGC	1 cut(s)	1675
FbaI	TGATCA	1 cut(s)	2086
FblI	GTMKAC	2 cut(s)	1521, 1862
Fnu4HI	GCNGC	5 cut(s)	222, 680, 711, 1178, 2066
FokI	GGATG	9 cut(s)	380, 442, 498, 580, 602, 1142, 1181, 1436, 2186
FriOI	GRGCYC	2 cut(s)	1277, 2131
Fsp4HI	GCNGC	5 cut(s)	222, 680, 711, 1178, 2066
FspBI	CTAG	3 cut(s)	245, 1325, 2135
GlaI	GCGC	3 cut(s)	18, 36, 537
GluI	GCNGC	5 cut(s)	222, 680, 711, 1178, 2066
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	3 cut(s)	1673, 1736, 1910
HaeII	RGCGCY	1 cut(s)	539
HapII	CCGG	3 cut(s)	539, 555, 2171
HgaI	GACGC	1 cut(s)	1824
HhaI	GCGC	3 cut(s)	19, 37, 538
Hin1I	GRCGYC	2 cut(s)	536, 1865
Hin6I	GCGC	3 cut(s)	17, 35, 536
HinP1I	GCGC	3 cut(s)	17, 35, 536
HincII	GTYRAC	4 cut(s)	859, 1529, 1863, 2121
HindII	GTYRAC	4 cut(s)	859, 1529, 1863, 2121
HinfI	GANTC	8 cut(s)	593, 629, 715, 778, 1145, 1259, 1543, 1938
HpaI	GTTAAC	1 cut(s)	859
HpaII	CCGG	3 cut(s)	539, 555, 2171
HphI	GGTGA	6 cut(s)	340, 574, 701, 1493, 1789, 1855
Hpy188III	TCNNGA	4 cut(s)	212, 337, 737, 1979
Hpy99I	CGWCG	4 cut(s)	403, 1224, 1864, 1867
HpyCH4III	ACNGT	5 cut(s)	306, 1355, 1526, 1619, 2034
HpyCH4IV	ACGT	5 cut(s)	398, 965, 1865, 1875, 1973
HpyF10VI	GCNNNNNNNGC	6 cut(s)	265, 440, 707, 915, 2135, 2224
HpyF3I	CTNAG	6 cut(s)	735, 798, 1026, 1568, 1577, 2049
HpySE526I	ACGT	5 cut(s)	398, 965, 1865, 1875, 1973
Hsp92I	GRCGYC	2 cut(s)	536, 1865
HspAI	GCGC	3 cut(s)	17, 35, 536
KasI	GGCGCC	1 cut(s)	535
KpnI	GGTACC	1 cut(s)	755
Ksp22I	TGATCA	1 cut(s)	2086
KspAI	GTTAAC	1 cut(s)	859
Kzo9I	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
LguI	GCTCTTC	1 cut(s)	456
LmnI	GCTCC	3 cut(s)	2079, 2208, 2224
Lsp1109I	GCAGC	2 cut(s)	1189, 2052
LweI	GCATC	3 cut(s)	558, 1120, 1159
MaeI	CTAG	3 cut(s)	245, 1325, 2135
MaeII	ACGT	5 cut(s)	398, 965, 1865, 1875, 1973
MaeIII	GTNAC	4 cut(s)	196, 689, 1460, 1619
MalI	GATC	8 cut(s)	66, 243, 281, 877, 1234, 1494, 1794, 2088
MboI	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
MboII	GAAGA	8 cut(s)	181, 473, 1784, 1830, 1831, 1930, 1933, 2084
MfeI	CAATTG	1 cut(s)	1076
MflI	RGATCY	4 cut(s)	64, 279, 875, 1232
MhlI	GDGCHC	5 cut(s)	654, 1038, 1277, 1288, 2131
MlsI	TGGCCA	1 cut(s)	1320
MluNI	TGGCCA	1 cut(s)	1320
Mly113I	GGCGCC	1 cut(s)	536
MlyI	GAGTC	2 cut(s)	772, 1139
MmeI	TCCRAC	4 cut(s)	555, 1434, 1770, 1796
Mox20I	TGGCCA	1 cut(s)	1320
MscI	TGGCCA	1 cut(s)	1320
MseI	TTAA	8 cut(s)	759, 788, 858, 981, 1124, 1431, 1904, 1989
MslI	CAYNNNNRTG	4 cut(s)	923, 1044, 1467, 1469
Msp20I	TGGCCA	1 cut(s)	1320
MspI	CCGG	3 cut(s)	539, 555, 2171
MspR9I	CCNGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
MunI	CAATTG	1 cut(s)	1076
MvaI	CCWGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
MwoI	GCNNNNNNNGC	6 cut(s)	265, 440, 707, 915, 2135, 2224
NarI	GGCGCC	1 cut(s)	536
NcoI	CCATGG	1 cut(s)	1598
NdeII	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
NlaIV	GGNNCC	9 cut(s)	281, 297, 537, 753, 1118, 1737, 2008, 2129, 2186
NmeAIII	GCCGAG	1 cut(s)	480
NmuCI	GTSAC	3 cut(s)	196, 689, 1460
PasI	CCCWGGG	1 cut(s)	1277
PceI	AGGCCT	2 cut(s)	134, 443
PciSI	GCTCTTC	1 cut(s)	456
PfeI	GAWTC	6 cut(s)	593, 629, 715, 1259, 1543, 1938
PflFI	GACNNNGTC	1 cut(s)	1874
PflMI	CCANNNNNTGG	3 cut(s)	380, 1112, 2174
PfoI	TCCNGGA	2 cut(s)	1689, 1887
PkrI	GCNGC	5 cut(s)	223, 681, 712, 1179, 2067
PleI	GAGTC	2 cut(s)	772, 1139
PluTI	GGCGCC	1 cut(s)	539
PpsI	GAGTC	2 cut(s)	772, 1139
PpuMI	RGGWCCY	1 cut(s)	1736
PshAI	GACNNNNGTC	1 cut(s)	2183
PshBI	ATTAAT	2 cut(s)	759, 981
Psp5II	RGGWCCY	1 cut(s)	1736
Psp6I	CCWGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
PspN4I	GGNNCC	9 cut(s)	281, 297, 537, 753, 1118, 1737, 2008, 2129, 2186
PspOMI	GGGCCC	1 cut(s)	2127
PspPPI	RGGWCCY	1 cut(s)	1736
PsrI	GAACNNNNNNTAC	2 cut(s)	2038, 2070
PstNI	CAGNNNCTG	1 cut(s)	1262
PsuI	RGATCY	4 cut(s)	64, 279, 875, 1232
PsyI	GACNNNGTC	1 cut(s)	1874
RsaI	GTAC	4 cut(s)	397, 733, 753, 889
RsaNI	GTAC	4 cut(s)	396, 732, 752, 888
RseI	CAYNNNNRTG	4 cut(s)	923, 1044, 1467, 1469
SalI	GTCGAC	1 cut(s)	1861
SapI	GCTCTTC	1 cut(s)	456
SaqAI	TTAA	8 cut(s)	759, 788, 858, 981, 1124, 1431, 1904, 1989
SatI	GCNGC	5 cut(s)	222, 680, 711, 1178, 2066
Sau3AI	GATC	8 cut(s)	64, 241, 279, 875, 1232, 1492, 1792, 2086
SchI	GAGTC	2 cut(s)	772, 1139
ScrFI	CCNGG	6 cut(s)	1062, 1278, 1691, 1750, 1889, 2125
SduI	GDGCHC	5 cut(s)	654, 1038, 1277, 1288, 2131
SfaNI	GCATC	3 cut(s)	558, 1120, 1159
SfcI	CTRYAG	1 cut(s)	2030
SfoI	GGCGCC	1 cut(s)	537
SgrDI	CGTCGACG	1 cut(s)	1861
SinI	GGWCC	7 cut(s)	525, 1058, 1103, 1117, 1595, 1736, 2185
SmiMI	CAYNNNNRTG	4 cut(s)	923, 1044, 1467, 1469
SseBI	AGGCCT	2 cut(s)	134, 443
SspDI	GGCGCC	1 cut(s)	535
SspMI	CTAG	3 cut(s)	245, 1325, 2135
StuI	AGGCCT	2 cut(s)	134, 443
StyD4I	CCNGG	6 cut(s)	1060, 1276, 1689, 1748, 1887, 2123
StyI	CCWWGG	2 cut(s)	1140, 1598
TaaI	ACNGT	5 cut(s)	306, 1355, 1526, 1619, 2034
TaiI	ACGT	5 cut(s)	401, 968, 1868, 1878, 1976
TaqI	TCGA	5 cut(s)	1271, 1670, 1862, 1978, 2193
TauI	GCSGC	3 cut(s)	224, 682, 713
TfiI	GAWTC	6 cut(s)	593, 629, 715, 1259, 1543, 1938
Tru1I	TTAA	8 cut(s)	759, 788, 858, 981, 1124, 1431, 1904, 1989
Tru9I	TTAA	8 cut(s)	759, 788, 858, 981, 1124, 1431, 1904, 1989
TscAI	CASTG	3 cut(s)	199, 309, 1215
TseFI	GTSAC	3 cut(s)	196, 689, 1460
TseI	GCWGC	2 cut(s)	1177, 2065
Tsp45I	GTSAC	3 cut(s)	196, 689, 1460
TspDTI	ATGAA	2 cut(s)	384, 606
TspGWI	ACGGA	2 cut(s)	272, 867
TspRI	CASTG	3 cut(s)	199, 309, 1215
Tth111I	GACNNNGTC	1 cut(s)	1874
Van91I	CCANNNNNTGG	3 cut(s)	380, 1112, 2174
VneI	GTGCAC	1 cut(s)	650
VpaK11BI	GGWCC	7 cut(s)	525, 1058, 1103, 1117, 1595, 1736, 2185
VspI	ATTAAT	2 cut(s)	759, 981
XapI	RAATTY	2 cut(s)	542, 1943
XmiI	GTMKAC	2 cut(s)	1521, 1862
XspI	CTAG	3 cut(s)	245, 1325, 2135
ZraI	GACGTC	1 cut(s)	1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.