No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16080 |
| fragaria_vesca | FvH4_6g28180 |
| malus_domestica | MD09G1228700.v1.1 MD17G1227100.v1.1 |
| prunus_persica | Prupe.3G104600_v2.0.a1 |
| pyrus_communis | pycom09g14760 |
| rosa_chinensis | RchiOBHm_Chr2g0132161 |
| rosa_laevigata | RLG00000019233 RLG00000019238 |
| rosa_multiflora | Rmu_sc0002005.1_g000013 Rmu_sc0009538.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00112350 |
| rosa_rugosa | Rorug02G0302700 |
| rosa_samantha | Rh2AG355800 Rh2BG361800 Rh2DG378900 |
| rosa_wichuraiana | Rw2G028890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 69 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 74, 106 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 107, 139 |
| AluBI | AGCT | 3 cut(s) | 13, 35, 208 |
| AluI | AGCT | 3 cut(s) | 13, 35, 208 |
| Alw26I | GTCTC | 2 cut(s) | 135, 166 |
| AoxI | GGCC | 1 cut(s) | 198 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| AsuC2I | CCSGG | 1 cut(s) | 127 |
| AsuHPI | GGTGA | 2 cut(s) | 85, 156 |
| AxyI | CCTNAGG | 1 cut(s) | 188 |
| BcnI | CCSGG | 1 cut(s) | 127 |
| BcoDI | GTCTC | 2 cut(s) | 135, 166 |
| BfaI | CTAG | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 1 cut(s) | 127 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BmiI | GGNNCC | 1 cut(s) | 124 |
| BmrFI | CCNGG | 1 cut(s) | 127 |
| Bpu10I | CCTNAGC | 1 cut(s) | 209 |
| BpuMI | CCSGG | 1 cut(s) | 127 |
| BsaI | GGTCTC | 1 cut(s) | 135 |
| Bse1I | ACTGG | 1 cut(s) | 75 |
| Bse21I | CCTNAGG | 1 cut(s) | 188 |
| BseGI | GGATG | 1 cut(s) | 64 |
| BseMII | CTCAG | 1 cut(s) | 202 |
| BseNI | ACTGG | 1 cut(s) | 75 |
| BseRI | GAGGAG | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BsiSI | CCGG | 1 cut(s) | 127 |
| BsmAI | GTCTC | 2 cut(s) | 135, 166 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bso31I | GGTCTC | 1 cut(s) | 135 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspCNI | CTCAG | 1 cut(s) | 201 |
| BspLI | GGNNCC | 1 cut(s) | 124 |
| BspTNI | GGTCTC | 1 cut(s) | 135 |
| BsrI | ACTGG | 1 cut(s) | 75 |
| BssMI | GATC | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstDEI | CTNAG | 2 cut(s) | 188, 209 |
| BstF5I | GGATG | 1 cut(s) | 64 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMAI | GTCTC | 2 cut(s) | 135, 166 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 125 |
| Bsu36I | CCTNAGG | 1 cut(s) | 188 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 1 cut(s) | 64 |
| BtsIMutI | CAGTG | 2 cut(s) | 68, 84 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| CviJI | RGCY | 5 cut(s) | 13, 35, 47, 200, 208 |
| CviKI_1 | RGCY | 5 cut(s) | 13, 35, 47, 200, 208 |
| DdeI | CTNAG | 2 cut(s) | 188, 209 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco31I | GGTCTC | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 1 cut(s) | 69 |
| Eco81I | CCTNAGG | 1 cut(s) | 188 |
| FaiI | YATR | 2 cut(s) | 27, 245 |
| FokI | GGATG | 1 cut(s) | 71 |
| FspBI | CTAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| HapII | CCGG | 1 cut(s) | 127 |
| HindIII | AAGCTT | 1 cut(s) | 11 |
| HinfI | GANTC | 1 cut(s) | 232 |
| HpaII | CCGG | 1 cut(s) | 127 |
| HphI | GGTGA | 2 cut(s) | 85, 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 190 |
| HpyAV | CCTTC | 2 cut(s) | 133, 182 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 2 cut(s) | 188, 209 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LpnPI | CCDG | 4 cut(s) | 56, 140, 175, 249 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 94, 97 |
| MnlI | CCTC | 4 cut(s) | 81, 112, 186, 197 |
| MspI | CCGG | 1 cut(s) | 127 |
| MspR9I | CCNGG | 1 cut(s) | 127 |
| NciI | CCSGG | 1 cut(s) | 127 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIV | GGNNCC | 1 cut(s) | 124 |
| NmuCI | GTSAC | 1 cut(s) | 73 |
| PfeI | GAWTC | 1 cut(s) | 232 |
| PspN4I | GGNNCC | 1 cut(s) | 124 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| ScrFI | CCNGG | 1 cut(s) | 127 |
| SetI | ASST | 8 cut(s) | 15, 37, 92, 144, 169, 197, 210, 254 |
| SspMI | CTAG | 1 cut(s) | 228 |
| StyD4I | CCNGG | 1 cut(s) | 125 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TfiI | GAWTC | 1 cut(s) | 232 |
| TscAI | CASTG | 2 cut(s) | 75, 84 |
| TseFI | GTSAC | 1 cut(s) | 73 |
| Tsp45I | GTSAC | 1 cut(s) | 73 |
| TspGWI | ACGGA | 1 cut(s) | 44 |
| TspRI | CASTG | 2 cut(s) | 75, 84 |
| XspI | CTAG | 1 cut(s) | 228 |